|
Name |
Accession |
Description |
Interval |
E-value |
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
12-264 |
1.02e-70 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 218.06 E-value: 1.02e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 12 RWALMAVGGAVALFLLLPIAFIVELSFGDSQWLIFPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLAS 91
Cdd:COG1177 6 RLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTFPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 92 LALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALEDAA 171
Cdd:COG1177 86 LALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 172 LVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTT 251
Cdd:COG1177 166 RDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLILLSL 245
|
250
....*....|...
gi 490666341 252 VLMLAGALLRRAR 264
Cdd:COG1177 246 LLLLLAERLRRRG 258
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
12-264 |
1.37e-26 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 103.91 E-value: 1.37e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 12 RWALMAVGGAVALFLLLPIAFIVELSFGDSQWLIfPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLAS 91
Cdd:PRK09500 3 RLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGI-NWKGFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLTA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 92 LALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALEDAA 171
Cdd:PRK09500 82 VALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 172 LVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTT 251
Cdd:PRK09500 162 KDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSL 241
|
250
....*....|...
gi 490666341 252 VLMLAGALLRRAR 264
Cdd:PRK09500 242 VLVILSQLLARDK 254
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
72-262 |
2.36e-11 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 61.49 E-value: 2.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 72 SFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFFLTPM------------VLPVVVLAVALYAFTLRIGLNGTMAG 139
Cdd:TIGR02141 3 SLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLvlpptvlgfyllIAFGPNGPIGKLLELFGISLVFTFTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 140 FVIGHLIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASP- 218
Cdd:TIGR02141 83 AVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNi 162
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 490666341 219 --TLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTTVLMLAGALLRR 262
Cdd:TIGR02141 163 pgETQTIPLAIYDAVESDYELAHQLSLVLLAISLIVLLLVELLNKR 208
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
69-252 |
4.06e-08 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 51.90 E-value: 4.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 69 LLTSFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGF----VIGH 144
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLglpaLILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 145 LIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLP 224
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPG 160
|
170 180
....*....|....*....|....*...
gi 490666341 225 VRIWTTLRQDLTPIVAAASSLLVGLTTV 252
Cdd:cd06261 161 TGLLLIFAILFPGDLGVAAAVALILLLL 188
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
88-262 |
1.18e-03 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 38.82 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 88 LLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTAL 167
Cdd:pfam00528 3 PLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 168 EDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASW-DEVVVSIFMASPTLQTLPVR-IWTTLRQDLTPIVAAASSL 245
Cdd:pfam00528 83 VEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALgGAVLLEFLGSWPGLGLLLIEaILGYDYPEIQGPVLAAALI 162
|
170
....*....|....*..
gi 490666341 246 LVGLTTVLMLAGALLRR 262
Cdd:pfam00528 163 LLLLNLLVDILQRLLDP 179
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
12-264 |
1.02e-70 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 218.06 E-value: 1.02e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 12 RWALMAVGGAVALFLLLPIAFIVELSFGDSQWLIFPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLAS 91
Cdd:COG1177 6 RLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTFPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 92 LALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALEDAA 171
Cdd:COG1177 86 LALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 172 LVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTT 251
Cdd:COG1177 166 RDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLILLSL 245
|
250
....*....|...
gi 490666341 252 VLMLAGALLRRAR 264
Cdd:COG1177 246 LLLLLAERLRRRG 258
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
7-245 |
4.04e-32 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 119.04 E-value: 4.04e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 7 RLGGLRWALMAVGGAVALFLLLPIAFIVELSFGDSQWLI-----FPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTF 81
Cdd:COG0395 9 RRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPAEIFsgppsLLPSEFTLENYRAAFTDGPFGRYLLNSLIVAVVSTV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 82 FSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLV 161
Cdd:COG0395 89 LSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGLLNTYWGLILPYLAFGLPFGIFLLRQFFR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 162 SFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVS-IFMASPTLQTLPVRIWTTLRQDLTP--I 238
Cdd:COG0395 169 SIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPlILLTSPDLRTLPVGLASFQGQYGTDwgL 248
|
....*..
gi 490666341 239 VAAASSL 245
Cdd:COG0395 249 LMAAAVI 255
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
7-264 |
1.42e-28 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 113.33 E-value: 1.42e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 7 RLGGLRW-ALMAVGGAVALFLLLPIAFIVELSFGDsqwliFPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVL 85
Cdd:COG1178 282 KLGRWRWlALALCLLLVLLGLLLPLLALLLWSLTK-----ALDDNLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVL 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 86 MGLLASLALVRGEFRGRNAVQAFFLTPMV---LPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVS 162
Cdd:COG1178 357 LALLLAYLVRRRRGRLARLLDRLAMLPYAvpgIVLGLGLLLLFNRPLPLLLYGTLAILVLAYVVRFLPFALRSLEAALAQ 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 163 FDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIWTTLRQDLTPIVAAA 242
Cdd:COG1178 437 IDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPPGFETLAVLIYQLASSGRYGEAAAL 516
|
250 260
....*....|....*....|..
gi 490666341 243 SSLLVGLTTVLMLAGALLRRAR 264
Cdd:COG1178 517 ALLLVLVSLLPVLLLERLLGRR 538
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
12-264 |
1.37e-26 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 103.91 E-value: 1.37e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 12 RWALMAVGGAVALFLLLPIAFIVELSFGDSQWLIfPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLAS 91
Cdd:PRK09500 3 RLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGI-NWKGFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLTA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 92 LALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALEDAA 171
Cdd:PRK09500 82 VALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 172 LVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTT 251
Cdd:PRK09500 162 KDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSL 241
|
250
....*....|...
gi 490666341 252 VLMLAGALLRRAR 264
Cdd:PRK09500 242 VLVILSQLLARDK 254
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
1-264 |
2.74e-26 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 103.69 E-value: 2.74e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 1 MLLDFDRLGGLRWALMAVGGAVALFLLLPIAFIVELSFGDSQWLIFPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVT 80
Cdd:COG1176 1 MSAALRRRLRPLLLLLPALLWLLLFFVLPLLLLLVYSFTTRDPYGGVVPGFTLENYARLFTDPLYLKVLLRTLWIALLTT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 81 FFSVLMGLLASLALVRGEFRGRNAVQAFFLTPMvlpVVVLAVALYAFTLRIGLNG--------------------TMAGF 140
Cdd:COG1176 81 LICLLLGYPIAYFLARAPPRWRNLLLLLVILPF---WTSFLVRTYAWIVLLGRNGllnslllalglideplrllyTEFAV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 141 VIGHLIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTL 220
Cdd:COG1176 158 VIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKV 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 490666341 221 QTLPVRIWTTLRQDLTPIVAAASS--LLVGLTTVLMLAGALLRRAR 264
Cdd:COG1176 238 LMIGNLIYQQFLSALNWPLAAALAvvLLLIVLLVLLLYLRLLRRRR 283
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
12-254 |
5.50e-22 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 92.14 E-value: 5.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 12 RWALMAVGGAVALFLLLPIAFIVELSFGDSQWLI---FPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGL 88
Cdd:COG3833 15 LGLRHLVLIILAIIALFPILWVVSASFNPGGSLYsssLIPENFTLENYKKLFTETPFLRWFLNSLIVAVVTAIISVFLAA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 89 LASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALE 168
Cdd:COG3833 95 LAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGLLNTLLGLILVYLGGAIPFNTWLMKGYFDTIPKELD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 169 DAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVV-SIFMASPTLQTLPVRIWTTLRQDLTPIVA--AASSL 245
Cdd:COG3833 175 EAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILaSVLLRSPENYTLAVGLYSFVSDQRNTNWGvfAAGAV 254
|
....*....
gi 490666341 246 LVGLTTVLM 254
Cdd:COG3833 255 LVAIPIVIL 263
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
1-264 |
1.20e-19 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 87.91 E-value: 1.20e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 1 MLLDFDRLGGLRWALMAVggAVALFLLLPIAFIVELSFGDSqwlifpppgwtLEWYRQLFTDPGWLGSLLTSFELAVIVT 80
Cdd:COG1178 1 MSTRPRRRPRLLLLLLAL--LLALLVLLPLLALLLRAFTDG-----------LANFWALLSDPYLWRALGNTLLLALLVT 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 81 FFSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVvvlAVALYAFTLRIGLNG------------------TMAGFVI 142
Cdd:COG1178 68 LLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPP---YVVALAWIALFGPNGllntllralfgleppdiyGLGGIIL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 143 GHLIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMAsPTLQT 222
Cdd:COG1178 145 VLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLG-GGYTT 223
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 490666341 223 LPVRIWTTLRQDLTPIVAAA-SSLLVGLTTVLMLAGALLRRAR 264
Cdd:COG1178 224 LTTAIYQAWLGDFDLGAAAAlALVLLLLVLLLLLLERRLRRRR 266
|
|
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
25-255 |
1.87e-18 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 82.59 E-value: 1.87e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 25 FLLLPIAFIVELSFGDSQwLIFPPPGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLASLALVR-GEFRGRN 103
Cdd:PRK10592 22 FLYAPMLMLVIYSFNSSK-LVTVWAGWSTRWYGELFRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRfGRFRGSN 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 104 AVqAFFLT-----PMVLPVVVLAVALYAFTLRIGLNGTMAGFVI--GHLIIALPFSIISISNSLVSFDTALEDAALVCGA 176
Cdd:PRK10592 101 GF-AFMITaplvmPDVITGLSLLLLFVALAHAIGWPADRGMLTIwlAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGA 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490666341 177 SPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTTVLML 255
Cdd:PRK10592 180 TPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGVVGIVGF 258
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
7-264 |
1.68e-17 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 79.41 E-value: 1.68e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 7 RLGGLRWALMAVGGAVALFLLLPIAFIVELSFGdsqwlifppPGWTLEWyrQLFTDPGWLGSLLTSFELAVIVTFFSVLM 86
Cdd:COG0555 5 VLPGFGLTLGLTLLYLSLIVLLPLAALVLKAAG---------LGWAEFW--AVLTSPRVLAALKLSLGTALIAALINLVF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 87 GLLASLALVRGEFRGRNAVQAFFLTPMV---LPVVVLAVALYAFTLRIG---------LNGTMAGFVIGHLIIALPFSII 154
Cdd:COG0555 74 GLPLAWVLVRYRFPGKRLVDALVDLPFAlptAVAGIALLLLFGPNGWLGqllaplgikVAFTPLGIVLAQTFVSLPFVVR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 155 SISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTL---QTLPVRIWTTL 231
Cdd:COG0555 154 TVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPmktEILPLLIYLKL 233
|
250 260 270
....*....|....*....|....*....|....
gi 490666341 232 RQ-DLTPIVAAASSLLVGLTTVLMLAGALLRRAR 264
Cdd:COG0555 234 EEgDYAGATAIALVLLLISFLLLLLINLLQRRSR 267
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
61-264 |
5.30e-13 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 66.23 E-value: 5.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 61 TDPGWLGSLLTSFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFFLTPM-------------VLPVVVLAVALYAF 127
Cdd:COG4149 1 LSPEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLvlpptvlgfylllLFGRNGPLGQLLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 128 TLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWD 207
Cdd:COG4149 81 LFGISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490666341 208 EVVVSIFMASPTL---QTLPVRIWtTLRQDLTPIVAAASSLLVGLT--TVLMLAGALLRRAR 264
Cdd:COG4149 161 EFGATLMFAGNIPgktQTLPLAIY-DAVEAGDYAAAHALSLILLAIsfVVLLLLNLLNRRRR 221
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
22-205 |
1.27e-11 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 63.23 E-value: 1.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 22 VALFLLLPIAFIVELSFGDSQwLIFPPPGWT-LEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLASLALVRGeFR 100
Cdd:COG1175 31 LLVFVLYPLLYTLYLSFTDWN-LLGPPPEFVgLDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNRK-LR 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 101 GRNAVQAFFLTPMVLPVVVLAVA-LYAFTLRIG-LNGTMAGFVIGH-------------LIIA-----LPFSIISISNSL 160
Cdd:COG1175 109 GRGFFRTLFFLPWVISPVVVALIwKWLFNPDYGlLNALLGALGLEPinwlgdpslalpaVIIVtvwkgTGFNMLIFLAGL 188
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 490666341 161 VSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLAS 205
Cdd:COG1175 189 QSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGA 233
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
72-262 |
2.36e-11 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 61.49 E-value: 2.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 72 SFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFFLTPM------------VLPVVVLAVALYAFTLRIGLNGTMAG 139
Cdd:TIGR02141 3 SLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLvlpptvlgfyllIAFGPNGPIGKLLELFGISLVFTFTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 140 FVIGHLIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASP- 218
Cdd:TIGR02141 83 AVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNi 162
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 490666341 219 --TLQTLPVRIWTTLRQDLTPIVAAASSLLVGLTTVLMLAGALLRR 262
Cdd:TIGR02141 163 pgETQTIPLAIYDAVESDYELAHQLSLVLLAISLIVLLLVELLNKR 208
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
2-260 |
5.69e-11 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 61.21 E-value: 5.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 2 LLDFDRLGGLRWALMAVGGAVALFLLLPIAFIVelsfgdsqWLIFPPPgwtLEWYRQLFTDPGWLGSLLTSFELAVIVTF 81
Cdd:TIGR00969 6 SARFRFIKWGKLSLGIALLYVFLILILPVAALF--------VQAFSKG---LGQFWQNATDPIAVSAYNLTLLMALIAVP 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 82 FSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNG------------TMAGFVIGHLIIAL 149
Cdd:TIGR00969 75 LNGVFGLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGswlasfgiqiifTWPGMALAMIFVSL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 150 PFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASP---TLQTLPVR 226
Cdd:TIGR00969 155 PFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNipgKTLTLPLL 234
|
250 260 270
....*....|....*....|....*....|....
gi 490666341 227 IWTTLRQDLTPIVAAASSLLVGLTTVLMLAGALL 260
Cdd:TIGR00969 235 IEERLEQYDYPGAYVIAAVLLLVSLVTLFLINAL 268
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
69-252 |
4.06e-08 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 51.90 E-value: 4.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 69 LLTSFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGF----VIGH 144
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLglpaLILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 145 LIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLP 224
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPG 160
|
170 180
....*....|....*....|....*...
gi 490666341 225 VRIWTTLRQDLTPIVAAASSLLVGLTTV 252
Cdd:cd06261 161 TGLLLIFAILFPGDLGVAAAVALILLLL 188
|
|
| YnjC |
COG4135 |
ABC-type uncharacterized transport system YnjBCD, permease component [General function ... |
5-205 |
6.83e-08 |
|
ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];
Pssm-ID: 443310 [Multi-domain] Cd Length: 564 Bit Score: 52.95 E-value: 6.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 5 FDRLGGLRWALMAVGGAVALFLLLPIAFIVELSFGDSQWliFP---PPGWTLE-WYRQLftdPGWLGSLLTSFELAVIVT 80
Cdd:COG4135 295 GLGDPALRRLGLALMLLIALLSLLGLALLLLWSFAGRWR--FPdalPSSWTLRfWQRAA---PGLLEPLGNTLLLALASA 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 81 FFSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSL 160
Cdd:COG4135 370 LIALVLVLACLEAEARRGRRPGRRALWLLYLPLLVPQIAFLFGLQVLLLRLGLDGTWLAVIWAHLVFVLPYVFLSLAGPW 449
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 490666341 161 VSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLAS 205
Cdd:COG4135 450 RALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILTAAAVGFAVS 494
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
11-202 |
7.53e-08 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 52.76 E-value: 7.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 11 LRWALMA-VGGAVALFLLLPIAFIVELSF--GDSQWLifpppgwTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMG 87
Cdd:TIGR03262 2 IARLLLAgMILALLLFLLLPLLALLTKSVydSDGDFI-------GLANFAEYFATPGLLQSLGNSLTVSAIVTAIVVPLA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 88 LLASLALVRGEFRGRNAVQAFFLTPMVL-PVVVLAVALYAFTLRIGLNGTMAGF--------VIGHLIIALPFSIISISN 158
Cdd:TIGR03262 75 FAFAYALTRSRIPGKGAFRLVALLPLLApSLLPAISLIYLFGNQGLLKGLLGGFsiygfwgiVIGEVFYTFPHALMILVT 154
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 490666341 159 SLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSF 202
Cdd:TIGR03262 155 ALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVF 198
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
7-242 |
1.40e-07 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 51.54 E-value: 1.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 7 RLGGLRWALMAVGgAVALFLLLPIAFIVELSFGDSQwlifpppGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLM 86
Cdd:PRK15050 21 RLRPLLWLLLPLL-VLAPLVVYPLVRVVLQSLTGEH-------GLGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 87 GLLASLALVRGEFRGRNAVQAF---------FLTPMVLPV------VVLAVALYAFTLRIG-LN--GTMAGFVIGHLIIA 148
Cdd:PRK15050 93 GVLLALVLAFVPFPGASLVGRFidtfvafpsFLITLAFTFlygsagSVNIALQRLFGLEAPpLDflYSPGGVILAEITFY 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 149 LPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMASPTLQTLPVRIW 228
Cdd:PRK15050 173 TPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTGAKDVVTLPVLIY 252
|
250
....*....|....
gi 490666341 229 TTLRQDLTPIVAAA 242
Cdd:PRK15050 253 SKAIVDFDYPTACA 266
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
69-260 |
1.06e-06 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 48.38 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 69 LLTSFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAvalYAFTLRIGLNGTMAGFVIGHL--- 145
Cdd:PRK09421 11 VLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTG---YLLLISMGRRGFIGQWLYEWFgis 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 146 -------------IIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVS 212
Cdd:PRK09421 88 fafswrgaalaaaVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGAT 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 490666341 213 IFMASPT---LQTLPVRIWTTLRqdlTPIVAAASSLLVGLTTVLMLAGALL 260
Cdd:PRK09421 168 ITFVSNIpgeTQTIPSAMYTLIQ---TPGGESAAARLCIISIAIALASLLL 215
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
58-234 |
9.18e-06 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 45.78 E-value: 9.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 58 QLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLASLALVRGEFRGRNAVQAFF------------LTPMVLPVVVLAVALY 125
Cdd:CHL00187 46 QKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVdlpfalptsvagLTLATVYGDNGWIGHL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 126 AFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTALEDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLAS 205
Cdd:CHL00187 126 LSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRA 205
|
170 180 190
....*....|....*....|....*....|...
gi 490666341 206 WDE----VVVSIFMASPTLqTLPVRIWTTLRQD 234
Cdd:CHL00187 206 IGEygsiVIISSNIPFKDL-VASVLIFQSLEQY 237
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
88-262 |
1.18e-03 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 38.82 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 88 LLASLALVRGEFRGRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNGTMAGFVIGHLIIALPFSIISISNSLVSFDTAL 167
Cdd:pfam00528 3 PLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 168 EDAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASW-DEVVVSIFMASPTLQTLPVR-IWTTLRQDLTPIVAAASSL 245
Cdd:pfam00528 83 VEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALgGAVLLEFLGSWPGLGLLLIEaILGYDYPEIQGPVLAAALI 162
|
170
....*....|....*..
gi 490666341 246 LVGLTTVLMLAGALLRR 262
Cdd:pfam00528 163 LLLLNLLVDILQRLLDP 179
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
22-216 |
1.84e-03 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 38.97 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 22 VALFLLLPI-AFIVELSfgdsqwlifpppGWTLEWYRQLFTDPGWLGSLLTSFELAVIVTFFSVLMGLLASLALVRGEFR 100
Cdd:PRK10971 24 VCLILLLPLsALVMQLS------------QMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFP 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490666341 101 GRNAVQAFFLTPMVLPVVVLAVALYAFTLRIGLNG------------TMAGFVIGHLIIALPFSIISISNSLVSFDTALE 168
Cdd:PRK10971 92 GRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGewlakfdikvtyTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYE 171
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 490666341 169 DAALVCGASPLEVKLRVTLPAIKLGLFAAAIFSFLASWDEVVVSIFMA 216
Cdd:PRK10971 172 EAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIA 219
|
|
| |
