|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
17-490 |
1.45e-161 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 466.23 E-value: 1.45e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 17 DALARASQQHRLYACLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVAR-RQGTMVARVGLPAAS 95
Cdd:COG1167 6 DRDSSGPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRpGSGTFVAARLPAPAP 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 96 ATASPTHARPALARRVtglpdidADDEREPLPFLPGMPALDQFPLAPWRRAVERAWRRIGPAQLGHAPLGGNLRLRQAIA 175
Cdd:COG1167 86 APRAAAAVAAPALRRL-------LEAAPGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAIA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 176 EYLRvSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPVDADGLAPSA--EHW 253
Cdd:COG1167 159 RYLA-RRGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDAleAAL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 254 RAHPPRLVYITPSHQYPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLAALQSLGDDAPVVYLGTFSKTMF 333
Cdd:COG1167 238 RRHRPRAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIYIGSFSKTLA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 334 PTLRIGFVVASAALAPQLRHTIGALAPRGRLAEQLALADFIEAGHFTRHLRRMRRLYEERRDALQDALARHLGGALTVSG 413
Cdd:COG1167 318 PGLRLGYLVAPGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTG 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490667797 414 GAGGMHLSARLDAPVADVDVARAALARAITVRPLSRFCLPGTDRaayNGLVLGYGAVPTEQIDACVRRLGAAIDDAL 490
Cdd:COG1167 398 PPGGLHLWLELPEGVDAEALAAAALARGILVAPGSAFSADGPPR---NGLRLGFGAPSEEELEEALRRLAELLRELA 471
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
126-484 |
4.15e-59 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 198.72 E-value: 4.15e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 126 LPFLPGMPALDQFPLAPWrravERAWRRIGPAQLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCA 205
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLE----ALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 206 RTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPVDADGLAPSAEHW----RAHPPRLVYITPsHQYPLGAVMSVERRV 281
Cdd:cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELleaaKTPKTKLLYLNN-PNNPTGAVLSEEELE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 282 ALVANARAAGAWIVEDDYDSEFRHFGAPLAALQSLGDDAPVVYLGTFSKTM-FPTLRIGFVVASaalAPQLRHTIGALAP 360
Cdd:cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFgLPGLRIGYLIAP---PEELLERLKKLLP 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 361 RGRL----AEQLALADFIEAGHftRHLRRMRRLYEERRDALQDALARHLGgaLTVSGGAGGMHLSARLDAPVADVDVARA 436
Cdd:cd00609 233 YTTSgpstLSQAAAAAALDDGE--EHLEELRERYRRRRDALLEALKELGP--LVVVKPSGGFFLWLDLPEGDDEEFLERL 308
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 490667797 437 ALARAITVRPLSRFCLPGTdraayNGLVLGYGAvPTEQIDACVRRLGA 484
Cdd:cd00609 309 LLEAGVVVRPGSAFGEGGE-----GFVRLSFAT-PEEELEEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
146-486 |
5.39e-30 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 120.62 E-value: 5.39e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 146 AVERAWRRIGPAQLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGA 225
Cdd:COG0436 48 IREAAIEALDDGVTGYTPSAGIPELREAIAAYYKRRYGVDLDPDEILVTNGAKEALALALLALLNPGDEVLVPDPGYPSY 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 226 RAAFEAADLRLVPIPVDA-DGLAPSAEHWRAH-PPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDD-- 298
Cdd:COG0436 128 RAAVRLAGGKPVPVPLDEeNGFLPDPEALEAAiTPRtkaIVLNSPNN--PTGAVYSREELEALAELAREHDLLVISDEiy 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 299 ----YDsEFRHfgAPLAALQSLGDDapVVYLGTFSKT--MfPTLRIGFVVASAALAPQLR-----HTIGALAPrgrlaEQ 367
Cdd:COG0436 206 eelvYD-GAEH--VSILSLPGLKDR--TIVINSFSKSyaM-TGWRIGYAVGPPELIAALLklqsnLTSCAPTP-----AQ 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 368 LALADFIEAGhfTRHLRRMRRLYEERRDALQDALARhLGgaLTVSGGAGGMHLSARLDAPVAD-VDVARAALARA-ITVR 445
Cdd:COG0436 275 YAAAAALEGP--QDYVEEMRAEYRRRRDLLVEGLNE-IG--LSVVKPEGAFYLFADVPELGLDsEEFAERLLEEAgVAVV 349
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 490667797 446 PLSRFCLPGTD--RAAYnglvlgygAVPTEQIDACVRRLGAAI 486
Cdd:COG0436 350 PGSAFGPAGEGyvRISY--------ATSEERLEEALERLARFL 384
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
31-404 |
1.19e-21 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 97.04 E-value: 1.19e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 31 CLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVAR-RQGTMVARVGLPAASATASPTHARPALAr 109
Cdd:PRK15481 13 SIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQgRNGTVIRGSPSPVALEGGDPGTPLHDLA- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 110 rvTGLPDIDaddereplpFLPGMPALDQFPLAPwrraverawrrigPAQLGHAPLggNLRLRQAIAEYLrvsrgiGCDAQ 189
Cdd:PRK15481 92 --GGNPDPQ---------RLPDLSRYFARLSRT-------------PRLYGDAPV--SPELHAWAARWL------RDDCP 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 190 QVFITDGTQHGLDLCARTLAD---AGDTVWIEHPGYAGARAAFEAADLRLVPIPVDADGLAPSA-EHWRAHPPRLVYITP 265
Cdd:PRK15481 140 VAFEIDLTSGAIDAIERLLCAhllPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKlERALAQGARAVILTP 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 266 SHQYPLGAVMSVERRVALVAN-ARAAGAWIVEDDydsefrHFgaplaALQSLGDDAPVVYLGT--------FSKTMFPTL 336
Cdd:PRK15481 220 RAHNPTGCSLSARRAAALRNLlARYPQVLVIIDD------HF-----ALLSSSPYHSVIPQTTqrwalirsVSKALGPDL 288
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490667797 337 RIGFVVASAALAPQLRHTigaLAPRGRLAEQLaLADFIEA----GHFTRHLRRMRRLYEERRDALQDALARH 404
Cdd:PRK15481 289 RLAFVASDSATSARLRLR---LNSGTQWVSHL-LQDLVYAcltdPEYQARLAQARLFYAQRRQKLARALQQY 356
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
163-482 |
7.34e-20 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 90.83 E-value: 7.34e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 163 PLGGNLRLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPV 241
Cdd:pfam00155 37 PTDGHPELREALAKFLGRSPVLKLDREaAVVFGSGAGANIEALIFLLANPGDAILVPAPTYASYIRIARLAGGEVVRYPL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 242 -DADGLAPSAEHWRA---HPPRLVYIT-PSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRhFGAPLAA--LQ 314
Cdd:pfam00155 117 yDSNDFHLDFDALEAalkEKPKVVLHTsPHN--PTGTVATLEELEKLLDLAKEHNILLLVDEAYAGFV-FGSPDAVatRA 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 315 SLGDDAPVVYLGTFSKTM-FPTLRIGFVVASAALAPQLRHTIG-----ALAPRGRLAeqlALADFIEaghFTRHLRRMRR 388
Cdd:pfam00155 194 LLAEGPNLLVVGSFSKAFgLAGWRVGYILGNAAVISQLRKLARpfyssTHLQAAAAA---ALSDPLL---VASELEEMRQ 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 389 LYEERRDALQDALARhLGgaLTVSGGAGGMHLSARLDaPVADVDVARAALARA-ITVRPLSRFCLPGTDRaaynglvLGY 467
Cdd:pfam00155 268 RIKERRDYLRDGLQA-AG--LSVLPSQAGFFLLTGLD-PETAKELAQVLLEEVgVYVTPGSSPGVPGWLR-------ITV 336
|
330
....*....|....*
gi 490667797 468 GAVPTEQIDACVRRL 482
Cdd:pfam00155 337 AGGTEEELEELLEAI 351
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
139-454 |
8.45e-18 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 84.41 E-value: 8.45e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 139 PLAPWRRAVErAWRRiGPAQLGHAPLGGNLRLRQAIAEYLrvsrgiGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIE 218
Cdd:COG0079 24 PYGPPPKVLE-AIAA-ALDALNRYPDPDATALREALAEYY------GVPPEQVLVGNGSDELIQLLARAFLGPGDEVLVP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 219 HPGYAGARAAFEAADLRLVPIPVDADgLAPSAEHWRA---HPPRLVYIT----PShqyplGAVMSVERRVALVANArAAG 291
Cdd:COG0079 96 EPTFSEYPIAARAAGAEVVEVPLDED-FSLDLDALLAaitERTDLVFLCnpnnPT-----GTLLPREELEALLEAL-PAD 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 292 AWIVEDdydsE-FRHFGAPLAALQSLGDDAP-VVYLGTFSKTM-FPTLRIGFVVASAALAPQLRH-----TIGALAprgR 363
Cdd:COG0079 169 GLVVVD----EaYAEFVPEEDSALPLLARYPnLVVLRTFSKAYgLAGLRLGYAIASPELIAALRRvrgpwNVNSLA---Q 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 364 LAEQLALADfieaghfTRHLRRMRRLYEERRDALQDALARhLGgaLTVSGGAGGMHLsARLDAPVAdvDVARAALARAIT 443
Cdd:COG0079 242 AAALAALED-------RAYLEETRARLRAERERLAAALRA-LG--LTVYPSQANFVL-VRVPEDAA--ELFEALLERGIL 308
|
330
....*....|.
gi 490667797 444 VRPLSRFCLPG 454
Cdd:COG0079 309 VRDFSSFGLPD 319
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
158-490 |
3.03e-15 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 77.47 E-value: 3.03e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 158 QLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLV 237
Cdd:PRK05764 61 KTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 238 PIPVDAD-GLAPSAEHWRAH-PPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDD------YDsefrhf 306
Cdd:PRK05764 141 FVPTGEEnGFKLTVEQLEAAiTPKtkaLILNSPSN--PTGAVYSPEELEAIADVAVEHDIWVLSDEiyeklvYD------ 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 307 GAPLAALQSLGDDAP--VVYLGTFSKT--MfpT-LRIGFVVASAALAPQLR----HTIG---ALAPRGRLAeqlAL---A 371
Cdd:PRK05764 213 GAEFTSIASLSPELRdrTITVNGFSKAyaM--TgWRLGYAAGPKELIKAMSklqsHSTSnptSIAQYAAVA---ALngpQ 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 372 DFIEaghftrhlrRMRRLYEERRDALQDALARHLGGALTVSGGAGGMHLSAR---LDAPVADVDVARAALARA-ITVRPL 447
Cdd:PRK05764 288 DEVE---------EMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSkllGKSITDSLEFAEALLEEAgVAVVPG 358
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 490667797 448 SRFCLPGTDRAAYnglvlgygAVPTEQIDACVRRLGAAIDDAL 490
Cdd:PRK05764 359 IAFGAPGYVRLSY--------ATSLEDLEEGLERIERFLESLK 393
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
160-342 |
1.54e-12 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 69.29 E-value: 1.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 160 GHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVP- 238
Cdd:TIGR01265 68 GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLy 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 239 --IP-----VDADGLAPSAEHWRAhppRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLA 311
Cdd:TIGR01265 148 dlLPekdweIDLDGLESLADEKTV---AIVVINPSN--PCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFI 222
|
170 180 190
....*....|....*....|....*....|..
gi 490667797 312 ALQSLGDDAPVVYLGTFSKT-MFPTLRIGFVV 342
Cdd:TIGR01265 223 PMASFASIVPVLSLGGISKRwVVPGWRLGWII 254
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
32-88 |
2.30e-12 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 63.66 E-value: 2.30e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 490667797 32 LRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVARR-QGTMVAR 88
Cdd:COG1725 19 IKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRgKGTFVAE 76
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
161-344 |
2.99e-12 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 68.50 E-value: 2.99e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 161 HAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLR----- 235
Cdd:PLN00143 70 YAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEirhfd 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 236 LVP---IPVDADGL-APSAEHWRAhpprLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLA 311
Cdd:PLN00143 150 LLPekgWEVDLDAVeAIADENTIA----MVIINPGN--PCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223
|
170 180 190
....*....|....*....|....*....|....
gi 490667797 312 ALQSLGDDAPVVYLGTFSKT-MFPTLRIGFVVAS 344
Cdd:PLN00143 224 PMGLFASIVPVITLGSISKRwMIPGWGLGWLVTC 257
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
26-87 |
7.93e-12 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 60.54 E-value: 7.93e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490667797 26 HRLYACLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVAR-RQGTMVA 87
Cdd:cd07377 4 EQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRpGRGTFVA 66
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
156-484 |
9.36e-12 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 66.52 E-value: 9.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 156 PAQLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLR 235
Cdd:PRK07550 58 PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIR 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 236 LVPIPVDA-DGLAPSAEHWRAH-PPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRH-FGAP 309
Cdd:PRK07550 138 PVYLPCDEgPGLLPDPAAAEALiTPRtraIALVTPNN--PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSgGGAP 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 310 LAALQSLGDDAPVVYLGTFSKTM-FPTLRIGFVVASAALAPQ---LRHTIGALAPRgrlAEQLALADFIEagHFTRHLRR 385
Cdd:PRK07550 216 HDLFADPDWDDTLVHLYSFSKSYaLTGHRVGAVVASPARIAEiekFMDTVAICAPR---IGQIAVAWGLP--NLADWRAG 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 386 MRRLYEERRDALQDALARhLGGALTVSGGAggmhLSARLDAPVAD---VDVARAALARAITVrplsrfCLPGT----DRA 458
Cdd:PRK07550 291 NRAEIARRRDAFRAVFAR-LPGWELLASGA----YFAYVRHPFPDrpsREVARRLAKEAGIL------CLPGTmfgpGQE 359
|
330 340
....*....|....*....|....*.
gi 490667797 459 AYngLVLGYGAVPTEQIDACVRRLGA 484
Cdd:PRK07550 360 GY--LRLAFANADVAGIGELVERLRA 383
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
158-426 |
9.36e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 66.51 E-value: 9.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 158 QLGHAPLggnlrlRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLV 237
Cdd:PRK06108 60 NLGIPEL------REALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 238 PIPvdadgLAPSAEHWR--------AHPPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFrHF 306
Cdd:PRK06108 134 CVP-----LDFGGGGWTldldrllaAITPRtraLFINSPNN--PTGWTASRDDLRAILAHCRRHGLWIVADEVYERL-YY 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 307 GAPLAA---LQSLGDDAPVVYLGTFSKTMFPT-LRIGFVVASAALAPQLRHTI-----GALAPRGRLAEqLALAdfiEAG 377
Cdd:PRK06108 206 APGGRApsfLDIAEPDDRIIFVNSFSKNWAMTgWRLGWLVAPPALGQVLEKLIeyntsCVAQFVQRAAV-AALD---EGE 281
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 490667797 378 HFTRHL-RRMRRlyeeRRDALQDALARhLGGaLTVSGGAGGMHLSARLDA 426
Cdd:PRK06108 282 DFVAELvARLRR----SRDHLVDALRA-LPG-VEVAKPDGAMYAFFRIPG 325
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
160-342 |
5.57e-11 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 64.42 E-value: 5.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 160 GHAPLGGNLRLRQAIAEYLRVSRGIgCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPI 239
Cdd:TIGR01264 68 GYAPTVGALSAREAIASYYHNPDGP-IEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLY 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 240 PVDADglapsaEHWRAHPPRLVYI-----------TPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGA 308
Cdd:TIGR01264 147 NLLPD------KSWEIDLKQLESLidektaalivnNPSN--PCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA 218
|
170 180 190
....*....|....*....|....*....|....*
gi 490667797 309 PLAALQSLGDDAPVVYLGTFSKT-MFPTLRIGFVV 342
Cdd:TIGR01264 219 TFEPLASLSSTVPILSCGGLAKRwLVPGWRLGWII 253
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
161-486 |
2.65e-09 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 59.00 E-value: 2.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 161 HAPLGGNLRLRQAIAEYLrvsrgiGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGAR--AAFEAADLRLVP 238
Cdd:PRK06225 62 YPPPEGFPELRELILKDL------GLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDnfASRFGAEVIEVP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 239 IPVDADGLAPSAEHWRAH---PPRLVY-ITPSHqyPLGAVMSVERRVALVANARAAGAWIVeddYDSEFRHF--GAPLAA 312
Cdd:PRK06225 136 IYSEECNYKLTPELVKENmdeNTRLIYlIDPLN--PLGSSYTEEEIKEFAEIARDNDAFLL---HDCTYRDFarEHTLAA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 313 lqslgDDAP--VVYLGTFSKTM-FPTLRIGFVVASAALAPQLRHTI----GA--LAPRGRLAEQLALADFIEaghftrhl 383
Cdd:PRK06225 211 -----EYAPehTVTSYSFSKIFgMAGLRIGAVVATPDLIEVVKSIVindlGTnvIAQEAAIAGLKVKDEWID-------- 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 384 rRMRRLYEERRDALQDALARHLGGALTVSGGAGGMHLSARLDAPVADVDVARAALARAITVRplsrfclpgtdRAAYNGL 463
Cdd:PRK06225 278 -RIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVR-----------QGTYTSK 345
|
330 340
....*....|....*....|....*....
gi 490667797 464 VLGYG------AVPTEQIDACVRRLGAAI 486
Cdd:PRK06225 346 RFGDRyirvsfSIPREQVEVFCEEFPDVV 374
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
144-394 |
1.60e-08 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 56.42 E-value: 1.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 144 RRAVERAWRRigpaqlgHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYA 223
Cdd:PRK08361 56 KRALDEGWTH-------YTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFV 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 224 GARAAFEAADLRLVPIPV--------DADGLAPSAehwrAHPPRLVYIT-PSHqyPLGAVMSVERRVALVANARAAGAWI 294
Cdd:PRK08361 129 CYVEDAKIAEAKPIRIPLreenefqpDPDELLELI----TKRTRMIVINyPNN--PTGATLDKEVAKAIADIAEDYNIYI 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 295 VEDDYDSEFRHFGAPLAALQSLGDDAPVVyLGTFSKTMFPT-LRIGFVVASAALAPQL----RHTIGALAPRGRLAEQLA 369
Cdd:PRK08361 203 LSDEPYEHFLYEGAKHYPMIKYAPDNTIL-ANSFSKTFAMTgWRLGFVIAPEQVIKDMiklhAYIIGNVASFVQIAGIEA 281
|
250 260
....*....|....*....|....*
gi 490667797 370 LADfieaGHFTRHLRRMRRLYEERR 394
Cdd:PRK08361 282 LRS----KESWKAVEEMRKEYNERR 302
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
160-344 |
3.18e-08 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 55.70 E-value: 3.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 160 GHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLR---- 235
Cdd:PLN02656 68 GYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEvryv 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 236 -LVP---IPVDADGLAPSAEHwraHPPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLA 311
Cdd:PLN02656 148 dLLPekgWEVDLDAVEALADQ---NTVALVIINPGN--PCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFV 222
|
170 180 190
....*....|....*....|....*....|....
gi 490667797 312 ALQSLGDDAPVVYLGTFSKT-MFPTLRIGFVVAS 344
Cdd:PLN02656 223 PMGVFGSIVPVLTLGSLSKRwIVPGWRLGWFVTT 256
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
137-395 |
6.97e-08 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 54.43 E-value: 6.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 137 QFPLAPWRRAVERAWRRIGPAQLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVW 216
Cdd:PRK08363 42 KFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 217 IEHPGYAGARAAFEAADlrLVPI---PVDADGLAPSAEHWRA----HPPRLVYITPSHqyPLGAVMSVERRVALVANARA 289
Cdd:PRK08363 122 IPGPSYPPYTGLVKFYG--GVPVeyrTIEEEGWQPDIDDIRKkiteKTKAIAVINPNN--PTGALYEKKTLKEILDIAGE 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 290 AGAWIVEDD------YDSEFRHFGaplaalqSLGDDAPVVYLGTFSKTMFPT-LRIG---FVVASAALApQLRHTIGALA 359
Cdd:PRK08363 198 HDLPVISDEiydlmtYEGKHVSPG-------SLTKDVPVIVMNGLSKVYFATgWRLGyiyFVDPEGKLA-EVREAIDKLA 269
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 490667797 360 pRGRLAE----QLALADFIEAGhfTRHLRRMRRLYEERRD 395
Cdd:PRK08363 270 -RIRLCPntpaQFAAIAGLTGP--MDYLEEYMKKLKERRD 306
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
27-86 |
9.21e-08 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 48.76 E-value: 9.21e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490667797 27 RLYACLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVAR-RQGTMV 86
Cdd:pfam00392 4 QVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRqGRGTFV 64
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
156-446 |
1.13e-07 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 54.04 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 156 PAQLGHApLGGNLRLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADL 234
Cdd:PRK07681 61 KESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADkEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 235 RLVPIPV-DADGLAPSAEHWR---AHPPRLVYIT-PSHQYPLGAVMSVERRValVANARAAGAWIVEDDYDSEFRHFG-A 308
Cdd:PRK07681 140 TSYYMPLkKENDFLPDLELIPeeiADKAKMMILNfPGNPVPAMAHEDFFKEV--IAFAKKHNIIVVHDFAYAEFYFDGnK 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 309 PLAALQSLGDDAPVVYLGTFSKTM-FPTLRIGFVVASA----ALAPQLRHT-IGALAPrgrlAEQLALADFIEAGHFtrh 382
Cdd:PRK07681 218 PISFLSVPGAKEVGVEINSLSKSYsLAGSRIGYMIGNEeivrALTQFKSNTdYGVFLP----IQKAACAALRNGAAF--- 290
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 490667797 383 LRRMRRLYEERRDALQDALARHlggALTVSGGAGGMHLSARLDAPVADVDVARAALARA-ITVRP 446
Cdd:PRK07681 291 CEKNRGIYQERRDTLVDGFRTF---GWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRAnVVVTP 352
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
166-432 |
2.72e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 52.55 E-value: 2.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 166 GNLRLRQAIAEYLRvSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPVDA-D 244
Cdd:PRK07568 67 GIPELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIeE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 245 GLA-PSAEHWRAH-PPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLAALQSLGDD 319
Cdd:PRK07568 146 GFHlPSKEEIEKLiTPKtkaILISNPGN--PTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 320 AP-VVYLGTFSKTmFPT--LRIGFVVASaalAPQLRHTIGALApRGRLA----EQLALADFIEAGhfTRHLRRMRRLYEE 392
Cdd:PRK07568 224 EDrVIIIDSVSKR-YSAcgARIGCLISK---NKELIAAAMKLC-QARLSpptlEQIGAAALLDTP--ESYFDEVREEYKK 296
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 490667797 393 RRDALQDALARHLGgaLTVSGGAGGMHLSARLdaPVADVD 432
Cdd:PRK07568 297 RRDILYEELNKIPG--VVCEKPKGAFYIIAKL--PVDDAE 332
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
170-411 |
2.95e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 52.75 E-value: 2.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 170 LRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPVDAD-GLAP 248
Cdd:PRK08960 74 LREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDsRYQL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 249 SAE----HWRAHPPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDdydsEFRH---FGAPLAALQSLGDDAP 321
Cdd:PRK08960 154 TPAlverHWNADTVGALVASPAN--PTGTLLSRDELAALSQALRARGGHLVVD----EIYHgltYGVDAASVLEVDDDAF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 322 VvyLGTFSKTMFPT-LRIGFVVASAALAPQLRH-----TIGALAPrgrlAEQLALADFIEAGhfTRHLRRMRRLYEERRD 395
Cdd:PRK08960 228 V--LNSFSKYFGMTgWRLGWLVAPPAAVPELEKlaqnlYISASTP----AQHAALACFEPET--LAILEARRAEFARRRD 299
|
250
....*....|....*.
gi 490667797 396 ALQDALaRHLGGALTV 411
Cdd:PRK08960 300 FLLPAL-RELGFGIAV 314
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
88-344 |
6.86e-07 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 51.69 E-value: 6.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 88 RVGLPAAS-ATASPTHARPALARRVTGLpdIDADDEREPLPFLPGMPAldqfPLAPWRRAVERAWRRIGPAQLG----HA 162
Cdd:PLN00145 18 RFERANAAlAAAGALSIRAVLNRVKACV--DAGGGPRPVLPLGHGDPS----AFPCFRTAPEAEDAVAAALRSGkynsYS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 163 PLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLR-----LV 237
Cdd:PLN00145 92 TCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEvrhfdLL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 238 P---IPVDADGLAPSAEhwrAHPPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLAALQ 314
Cdd:PLN00145 172 PergWEVDLEGVEALAD---ENTVAMVIINPNN--PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMG 246
|
250 260 270
....*....|....*....|....*....|.
gi 490667797 315 SLGDDAPVVYLGTFSKT-MFPTLRIGFVVAS 344
Cdd:PLN00145 247 VFGEVAPVLTLGSISKRwVVPGWRLGWIATC 277
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
141-403 |
9.59e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 50.83 E-value: 9.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 141 APWRRAVERAWRRiGPAQlgHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHP 220
Cdd:PRK07337 46 EPVVEAAARALRR-GVTQ--YTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDP 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 221 GYAGARAAFEAADLRLVPIPVDAD-----GLAPSAEHWRAHPPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIV 295
Cdd:PRK07337 123 SYPCNRHFVAAAEGRPVLVPSGPAerfqlTAADVEAAWGERTRGVLLASPSN--PTGTSIAPDELRRIVEAVRARGGFTI 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 296 EDDYDSEFRHFGAPLAALqSLGDDapVVYLGTFSKTMFPT-LRIGFVVASAALAPQLRHTIGAL---APrgRLAEQLALA 371
Cdd:PRK07337 201 VDEIYQGLSYDAAPVSAL-SLGDD--VITINSFSKYFNMTgWRLGWLVVPEALVGTFEKLAQNLficAS--ALAQHAALA 275
|
250 260 270
....*....|....*....|....*....|..
gi 490667797 372 DFiEAGHFTRHLRRmRRLYEERRDALQDALAR 403
Cdd:PRK07337 276 CF-EPDTLAIYERR-RAEFKRRRDFIVPALES 305
|
|
| PRK09082 |
PRK09082 |
methionine aminotransferase; Validated |
160-403 |
1.29e-06 |
|
methionine aminotransferase; Validated
Pssm-ID: 181642 [Multi-domain] Cd Length: 386 Bit Score: 50.68 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 160 GH---APLGGNLRLRQAIAEYLRVSRGIGCDA-QQVFITDGTQHGLdLCART-LADAGDTVWIEHPGYAGARAAFEAADL 234
Cdd:PRK09082 59 GHnqyPPMTGVAALREAIAAKTARLYGRQYDAdSEITVTAGATEAL-FAAILaLVRPGDEVIVFDPSYDSYAPAIELAGG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 235 RLVPIPVDADGLAPSAEHWRA---HPPRLVYITPSHQyPLGAVMSVERRVALVANARAAGAWIVEDD------YDSEfRH 305
Cdd:PRK09082 138 RAVRVALQPPDFRVDWQRFAAaisPRTRLIILNTPHN-PSGTVWSAADMRALWQLIAGTDIYVLSDEvyehivFDGA-GH 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 306 fgAPLAALQSLGDDAPVVylGTFSKTMFPT-LRIGFVVASAALAPQLRHTIGALAPRGRLAEQLALADFIEAGhfTRHLR 384
Cdd:PRK09082 216 --ASVLRHPELRERAFVV--SSFGKTYHVTgWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAE--PEHYL 289
|
250
....*....|....*....
gi 490667797 385 RMRRLYEERRDALQDALAR 403
Cdd:PRK09082 290 ELPAFYQAKRDRFRAALAN 308
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
28-86 |
3.04e-06 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 44.49 E-value: 3.04e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 28 LYACLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVARRQ-GTMV 86
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGsGTFV 60
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
146-475 |
6.38e-06 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 48.27 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 146 AVERAWRRI----GPAQLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTV------ 215
Cdd:PRK06836 50 AVKEALRELaeeeDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVivfapy 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 216 ------WIEHPGyagaraafeaadLRLVPIPVDADGLAPSAEHWRAHpprlvyITP--------SHQYPLGAVMSVERRV 281
Cdd:PRK06836 130 fveyrfYVDNHG------------GKLVVVPTDTDTFQPDLDALEAA------ITPktkaviinSPNNPTGVVYSEETLK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 282 ALVANARAAGA------WIVEDDYDSEFRHFGAPLAALQSLGDDAPVVYlgTFSKTM-FPTLRIGFVVASAAlAPQLRHT 354
Cdd:PRK06836 192 ALAALLEEKSKeygrpiYLISDEPYREIVYDGAEVPYIFKYYDNSIVVY--SFSKSLsLPGERIGYIAVNPE-MEDADDL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 355 IGALAPRGRlaeqlALAdFIEA-GHFTRHLRRMRRL------YEERRDALQDALARhLGgaLTVSGGAGGMHLSARldAP 427
Cdd:PRK06836 269 VAALVFANR-----ILG-FVNApALMQRVVAKCLDAtvdvsiYKRNRDLLYDGLTE-LG--FECVKPQGAFYLFPK--SP 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 490667797 428 VADvDVA--RAALARAITVRPLSRFCLPGTDRAAYnglvlgygAVPTEQI 475
Cdd:PRK06836 338 EED-DVAfcEKAKKHNLLLVPGSGFGCPGYFRLSY--------CVDTETI 378
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
26-88 |
8.41e-06 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 47.16 E-value: 8.41e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490667797 26 HRLYACLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVARR-QGTMVAR 88
Cdd:COG2188 8 LQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQgRGTFVAE 71
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
14-89 |
9.30e-06 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 46.84 E-value: 9.30e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490667797 14 TARDALARASQQHRLYACLRAAILNGTLEAGTYLmSSRALAETLRIARNTVLYAYERLAAEGFVVARRQ-GTMVARV 89
Cdd:COG1802 2 TSPSPLRRESLAEQVYEALREAILSGELPPGERL-SEAELAERLGVSRTPVREALRRLEAEGLVEIRPNrGARVAPL 77
|
|
| PRK07324 |
PRK07324 |
transaminase; Validated |
166-403 |
1.90e-05 |
|
transaminase; Validated
Pssm-ID: 235989 Cd Length: 373 Bit Score: 46.85 E-value: 1.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 166 GNLRLRQAIAE-YLRVSrgigcdAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAgaraafeaadlRLVPIP---- 240
Cdd:PRK07324 63 GSPEFKEAVASlYQNVK------PENILQTNGATGANFLVLYALVEPGDHVISVYPTYQ-----------QLYDIPeslg 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 241 --VD------ADGLAPSAEHWRA--HP-PRLVYITPSHQyPLGAVMSVERRVALVANARAAGAWIVEDDYdseFRHFGAP 309
Cdd:PRK07324 126 aeVDywqlkeENGWLPDLDELRRlvRPnTKLICINNANN-PTGALMDRAYLEEIVEIARSVDAYVLSDEV---YRPLDED 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 310 laalqslGDDAPVVYL-------GTFSKTM-FPTLRIGFVVASAALAPQLR-----HTIGAlaprGRLAEQLALadfIEA 376
Cdd:PRK07324 202 -------GSTPSIADLyekgistNSMSKTYsLPGIRVGWIAANEEVIDILRkyrdyTMICA----GVFDDMLAS---LAL 267
|
250 260
....*....|....*....|....*..
gi 490667797 377 GHFTRHLRRMRRLYEERRDALQDALAR 403
Cdd:PRK07324 268 EHRDAILERNRKIVRTNLAILDEWVAK 294
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
166-401 |
2.21e-05 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 46.64 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 166 GNLRLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIE---HPGYAGAraafeaadLRL---VP 238
Cdd:PRK07683 66 GLLELRKAACNFVKDKYDLHYSPEsEIIVTIGASEAIDIAFRTILEPGTEVILPapiYPGYEPI--------IRLcgaKP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 239 IPVD--ADGLAPSAEHWR-AHPPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEF----RHFGa 308
Cdd:PRK07683 138 VFIDtrSTGFRLTAEALEnAITEKtrcVVLPYPSN--PTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELvyeqPHTS- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 309 pLAALQSLGDDAPVVylGTFSKTMFPT-LRIGFVVASAALAPQLR--HTIGALAPRGrlAEQLALADFIEAGhfTRHLRR 385
Cdd:PRK07683 215 -IAHFPEMREKTIVI--NGLSKSHSMTgWRIGFLFAPSYLAKHILkvHQYNVTCASS--ISQYAALEALTAG--KDDAKM 287
|
250
....*....|....*.
gi 490667797 386 MRRLYEERRDALQDAL 401
Cdd:PRK07683 288 MRHQYKKRRDYVYNRL 303
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
166-415 |
4.38e-05 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 45.88 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 166 GNLRLRQAIAEYLRVSRGIGCD-AQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADlrLVPIPVD-- 242
Cdd:PRK07682 58 GLLELRQEIAKYLKKRFAVSYDpNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAG--GVPVPVAtt 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 243 -ADGLAPSAEHW-RAHPPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDD------YDSEFRHFgaplA 311
Cdd:PRK07682 136 lENEFKVQPAQIeAAITAKtkaILLCSPNN--PTGAVLNKSELEEIAVIVEKHDLIVLSDEiyaeltYDEAYTSF----A 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 312 ALQSLGDDapVVYLGTFSKTMFPT-LRIGFVVASAAL-APQLR-HTIGAL-APRgrlAEQLALADFIEAGhfTRHLRRMR 387
Cdd:PRK07682 210 SIKGMRER--TILISGFSKGFAMTgWRLGFIAAPVYFsEAMLKiHQYSMMcAPT---MAQFAALEALRAG--NDDVIRMR 282
|
250 260
....*....|....*....|....*...
gi 490667797 388 RLYEERRDALQDALaRHLGGALTVSGGA 415
Cdd:PRK07682 283 DSYRKRRNFFVTSF-NEIGLTCHVPGGA 309
|
|
| PRK08175 |
PRK08175 |
aminotransferase; Validated |
169-402 |
1.23e-04 |
|
aminotransferase; Validated
Pssm-ID: 181268 [Multi-domain] Cd Length: 395 Bit Score: 44.32 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 169 RLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGAR--AAFEAADLRLVPIPVDADG 245
Cdd:PRK08175 71 RLRRAISRWYQDRYDVDIDPEsEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIygAVIAGAQVRSVPLVEGVDF 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 246 LAPSAEHWRAHPPR---LVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVED-DY-DSEFRHFGAPlAALQSLGDDA 320
Cdd:PRK08175 151 FNELERAIRESYPKpkmMILGFPSN--PTAQCVELEFFEKVVALAKRYDVLVVHDlAYaDIVYDGWKAP-SIMQVPGAKD 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 321 PVVYLGTFSKTM-FPTLRIGFVVASAALAPQLR-----HTIGALAPRgrlaeQLALADFIEAGHftRHLRRMRRLYEERR 394
Cdd:PRK08175 228 VAVEFFTLSKSYnMAGWRIGFMVGNPELVSALAriksyHDYGTFTPL-----QVAAIAALEGDQ--QCVRDIAEQYKRRR 300
|
....*...
gi 490667797 395 DALQDALA 402
Cdd:PRK08175 301 DVLVKGLH 308
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
18-95 |
1.74e-04 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 43.00 E-value: 1.74e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490667797 18 ALARASQQHRLYACLRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVARR-QGTMVARVGLPAAS 95
Cdd:COG2186 2 PIRRRSLAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQgGGTFVREPSPWALL 80
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
161-341 |
1.92e-04 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 43.95 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 161 HAPLGGNLRLRQAIAEYLRVSRGIGCDAQQVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLR----- 235
Cdd:PLN02187 104 YGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEvrkfd 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 236 LVP---IPVDADGLAPSAEHwraHPPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDD-YDSEFrhFG-APL 310
Cdd:PLN02187 184 LLPekeWEIDLEGIEAIADE---NTVAMVVINPNN--PCGNVYSHDHLKKVAETARKLGIMVISDEvYDRTI--FGdNPF 256
|
170 180 190
....*....|....*....|....*....|..
gi 490667797 311 AALQSLGDDAPVVYLGTFSKT-MFPTLRIGFV 341
Cdd:PLN02187 257 VSMGKFASIVPVLTLAGISKGwVVPGWKIGWI 288
|
|
| PRK08068 |
PRK08068 |
transaminase; Reviewed |
144-415 |
6.39e-04 |
|
transaminase; Reviewed
Pssm-ID: 181219 Cd Length: 389 Bit Score: 42.22 E-value: 6.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 144 RRAVERawrrigPAQLGHAPLGGNLRLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGY 222
Cdd:PRK08068 55 QEAAEN------PANHKYSPFRGYPFLKEAAADFYKREYGVTLDPEtEVAILFGGKAGLVELPQCLMNPGDTILVPDPGY 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 223 AGARAAFEAADLRLVPIPVDAD-GLAPSAEhwrAHPP------RLVYIT-PSHqyPLGAVMSVERRVALVANARAAGAWI 294
Cdd:PRK08068 129 PDYLSGVALARAQFETMPLIAEnNFLPDYT---KIPEevaekaKLMYLNyPNN--PTGAVATKAFFEETVAFAKKHNIGV 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 295 VED------DYDSEfrhfgAPLAALQSLGDDAPVVYLGTFSKT--MfPTLRIGFVVASAALAPQLR----HTIGALAPrg 362
Cdd:PRK08068 204 VHDfaygaiGFDGQ-----KPVSFLQTPGAKDVGIELYTLSKTfnM-AGWRVAFAVGNESVIEAINllqdHLFVSLFG-- 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 490667797 363 rlAEQLALADFIEAGHftRHLRRMRRLYEERRDALQDAlARHLGGALTVSGGA 415
Cdd:PRK08068 276 --AIQDAAIEALLSDQ--SCVAELVARYESRRNAFISA-CREIGWEVDAPKGS 323
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
163-351 |
1.15e-03 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 41.25 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 163 PLGGNLRLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPV 241
Cdd:PRK07309 65 GMAGLLELRQAAADFVKEKYNLDYAPEnEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 242 DADGLAPSAEHWRA----HPPRLVYIT---PSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLAALQ 314
Cdd:PRK07309 145 TENDFVLTPEMLEKaileQGDKLKAVIlnyPAN--PTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIA 222
|
170 180 190
....*....|....*....|....*....|....*...
gi 490667797 315 SLGDDAPVVYLGtFSKTMFPT-LRIGFVVASAALAPQL 351
Cdd:PRK07309 223 EYLPDQTILING-LSKSHAMTgWRIGLIFAPAEFTAQL 259
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
131-222 |
1.55e-03 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 40.93 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 131 GMPALDQFPLAPwrRAVERAWRRIGPAQL--GHAPLGGNLRLRQAIAEYLRV------SRGIGCDAQQVFITDGTQHGLD 202
Cdd:PTZ00433 41 GDPTLDGNLLTP--AIQTKALVEAVDSQEcnGYPPTVGSPEAREAVATYWRNsfvhkeSLKSTIKKDNVVLCSGVSHAIL 118
|
90 100
....*....|....*....|
gi 490667797 203 LCARTLADAGDTVWIEHPGY 222
Cdd:PTZ00433 119 MALTALCDEGDNILVPAPGF 138
|
|
| PRK09147 |
PRK09147 |
succinyldiaminopimelate transaminase; Provisional |
260-449 |
1.63e-03 |
|
succinyldiaminopimelate transaminase; Provisional
Pssm-ID: 236393 Cd Length: 396 Bit Score: 40.63 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 260 LVYI-TPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSE--FRHFGAPLAALQS---LG--DDAPVVYLGTFSK- 330
Cdd:PRK09147 169 LLFVcSPGN--PTGAVLPLDDWKKLFALSDRYGFVIASDECYSEiyFDEAAPPLGLLEAaaeLGrdDFKRLVVFHSLSKr 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 331 TMFPTLRIGFVVASAA-LAPQLRHTI---GALAPRGRLAEQLALADfiEAghftrHLRRMRRLYEERRDALQDALARhlg 406
Cdd:PRK09147 247 SNVPGLRSGFVAGDAAlLKKFLLYRTyhgCAMPPAVQAASIAAWND--EA-----HVRENRALYREKFDAVTPILAP--- 316
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 490667797 407 gALTVSGGAGGMHLSARldAPVADVDVARAALARA-ITVRP---LSR 449
Cdd:PRK09147 317 -VLDVQLPDAGFYLWAK--VPGDDTEFARRLYADYnVTVLPgsyLAR 360
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
170-403 |
4.87e-03 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 39.28 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 170 LRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARA--AFEAADLRLVPIPVDADGL 246
Cdd:PRK09148 73 LRRAQAAYYARRFGVKLNPDtQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFgfIMAGGVIRSVPAEPDEEFF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 247 aPSAEHWRAH----PPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPL-AALQSLGDDAP 321
Cdd:PRK09148 153 -PALERAVRHsipkPIALIVNYPSN--PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPpSVLQVPGAKDV 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 322 VVYLGTFSKTM-FPTLRIGFVVASAALapqlrhtIGALAprgrlaeqlALADFIEAGHFT--------------RHLRRM 386
Cdd:PRK09148 230 TVEFTSMSKTFsMAGWRMGFAVGNERL-------IAALT---------RVKSYLDYGAFTpiqvaataalngpqDCIAEM 293
|
250
....*....|....*..
gi 490667797 387 RRLYEERRDALQDALAR 403
Cdd:PRK09148 294 RELYKKRRDVLVESFGR 310
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
32-83 |
8.65e-03 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 38.21 E-value: 8.65e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 490667797 32 LRAAILNGTLEAGTYLMSSRALAETLRIARNTVLYAYERLAAEGFVVARRQG 83
Cdd:PRK10421 11 VRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGG 62
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
166-320 |
9.21e-03 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 38.59 E-value: 9.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 166 GNLRLRQAIAEYLRVSRGIGCDAQ-QVFITDGTQHGLDLCARTLADAGDTVWIEHPGYAGARAAFEAADLRLVPIPVDAD 244
Cdd:PRK06207 79 GDADIRELLAARLAAFTGAPVDAAdELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490667797 245 G--------LAPSAEHWRAHPPRLVYITPSHqyPLGAVMSVERRVALVANARAAGAWIVEDDYDSEFRHFGAPLAALQSL 316
Cdd:PRK06207 159 SadkragldLDQLEEAFKAGVRVFLFSNPNN--PAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRAL 236
|
....
gi 490667797 317 GDDA 320
Cdd:PRK06207 237 PIDP 240
|
|
| |
