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MULTISPECIES: TonB-dependent receptor plug domain-containing protein [Pseudoalteromonas]
Protein Classification
TonB-dependent receptor ( domain architecture ID 1003665 )
TonB-dependent receptor may act as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds
List of domain hits
Name
Accession
Description
Interval
E-value
TonB-Xanth-Caul super family
cl36973 TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
40-880
1.18e-50
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
TIGR01782 :Pssm-ID: 273804 [Multi-domain]
Cd Length: 845
Bit Score: 192.16
E-value: 1.18e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 40 IEE V VAV G T R lq G S AAAVVEERKNQAF V A D ILGS E QLSRTG D SDA A S AL R RV T G LTLV ---- D G KFIY VRGLG ER Y SSAR 115
Cdd:TIGR01782 1 LDA V QVT G Q R -- A S LEKAIDAKRDADS V V D VISA E DIGKLP D VNV A E AL Q RV P G VSIE rdqg E G RYVS VRGLG PS Y NRTT 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 116 LNG AY I P S P D LTRNVIP LD IF P ASIIESMA V Q K AYSP DM PAAFG GG NI D I RT KTA ---- PSEFTAGIEV G A g Y D T A SS D G 191
Cdd:TIGR01782 79 LNG RT I A S T D SGGRAFS LD LL P SELVSGVE V Y K TPTA DM DEGGI GG TV D L RT RSP fdyd GRTLSGSAQG G Y - N D L A GK D K 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 192 ftynrnengipselsqai STY RG DF S IGNI vsseg F E DG DL traeqatavnnallkslprdyelkeesldprynikahyg 271
Cdd:TIGR01782 158 ------------------ PGP RG AA S YSWT ----- F G DG QF --------------------------------------- 175
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 272 dsfeesyfggkv G F LL AGA Y knewdfeerfssvit Q DLENE E G NV ------ DC T TSLATSEDVSNS cy NT V KNSQVTTET 345
Cdd:TIGR01782 176 ------------ G V LL SAS Y --------------- Q KRDFA E D NV etenwg TY T SADGGAQGLYFP -- RG V RYRSYRNDR 226
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 346 E SYNGSL SL SY R LG - THSISAQQ LY IIDNE DE SEIA I SQSPAGSSTFS I AGDGI A NRN ------------- H E FN Y E E RQ 411
Cdd:TIGR01782 227 E RKGVNG SL QW R PS d ALELYLDT LY SKYDD DE TRQQ I EFRTLNGGSTV I TSNQT A TSG alvqgtvanlqil V E AR Y N E EK 306
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 412 LNI T QVM -- G QH T F l D YFGIGA D WQ Y TE A KATTDIPTSA --------- DF EF R --------- DTYNS D G S YAGSTIT G DD 471
Cdd:TIGR01782 307 ETT T SLT lg G EW T G - D RWTLDG D LG Y SK A TRDRPDRVTR fftaptpgy DF DY R ggptltlgt PADGD D A S NYTNPAN G EL 385
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 472 N R VIM SY TNM E ERVKS yggn LT L PLS F ESMEVEF K V G YDFSD R ARIFNT S SFAINNS G GS G I S --------- IND G STDA 542
Cdd:TIGR01782 386 R R TQI SY QKA E DSEDA ---- AQ L DAT F DGPFTSL K F G VRYRR R DKTNRG S RYRRSII G AT G A S glagvpsdl AGA G LDGG 461
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 543 L NNSGFL --- T D DFIDN NA VLV D FNEPTAPDADDYIAA ----- QKVD A G YA SFDVFYDQWI R ISG G I RYE EFK Q S S I G TS 614
Cdd:TIGR01782 462 L GGPLTG wdp A D LDAFL NA ARG D AAGGGTYTYASTAPN tytvt EDTT A A YA MANFDTGLRL R GNV G V RYE RTD Q T S D G WQ 541
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 615 S lifdeddlntfy D P DKIQA GSV IT -------- D D WY P A L SVT Y VGG DD YQV R LGYGE T VV RPDF REVVP - VTYY D PL T D 685
Cdd:TIGR01782 542 S ------------ Q P AANGT GSV LV pvsadrdy T D VL P S L NLA Y DLT DD LVL R FAASK T IT RPDF GDLAA n TSLS D DG T G 609
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 686 IRTFGRT G --- I K SSPIK N Y DL RY E Y Y GQA G NSF S V A A FYKDI --------- T APIETVLNIGDEDYSA S - FI NG ET A - E 751
Cdd:TIGR01782 610 GTVTVSG G npd L K PYESD N L DL SL E W Y FGP G GLL S A A V FYKDI knfivttts T ETNDGGGGLVVAGVLV S r PV NG GK A g K 689
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 752 VY G I E AEWL Q DLT F VS --- E G LFTSG N I T LS DSEA SID pal AGTLTNP K KRMT G H S EYVV N LQ L N Y DS ld G MH S SS L V YN 828
Cdd:TIGR01782 690 IR G V E LGYQ Q TFD F LP gpl S G FGVQA N Y T YV DSEA DPS --- VDGVQRR K LPLP G L S KNTA N AT L Y Y EK -- G GF S AR L S YN 764
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*.
gi 490723786 829 VFGERI L AA G VA N -- R D D A Y EQ P FHS LDL VYT Y yp DFNSKIK -- FKVK NL LD E DQE 880
Cdd:TIGR01782 765 YRSDYL L DV G GS N in R L D R Y VD P RGQ LDL SAS Y -- QVSDHLS lg LQAS NL TN E PSR 818
Name
Accession
Description
Interval
E-value
TonB-Xanth-Caul
TIGR01782 TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
40-880
1.18e-50
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain]
Cd Length: 845
Bit Score: 192.16
E-value: 1.18e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 40 IEE V VAV G T R lq G S AAAVVEERKNQAF V A D ILGS E QLSRTG D SDA A S AL R RV T G LTLV ---- D G KFIY VRGLG ER Y SSAR 115
Cdd:TIGR01782 1 LDA V QVT G Q R -- A S LEKAIDAKRDADS V V D VISA E DIGKLP D VNV A E AL Q RV P G VSIE rdqg E G RYVS VRGLG PS Y NRTT 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 116 LNG AY I P S P D LTRNVIP LD IF P ASIIESMA V Q K AYSP DM PAAFG GG NI D I RT KTA ---- PSEFTAGIEV G A g Y D T A SS D G 191
Cdd:TIGR01782 79 LNG RT I A S T D SGGRAFS LD LL P SELVSGVE V Y K TPTA DM DEGGI GG TV D L RT RSP fdyd GRTLSGSAQG G Y - N D L A GK D K 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 192 ftynrnengipselsqai STY RG DF S IGNI vsseg F E DG DL traeqatavnnallkslprdyelkeesldprynikahyg 271
Cdd:TIGR01782 158 ------------------ PGP RG AA S YSWT ----- F G DG QF --------------------------------------- 175
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 272 dsfeesyfggkv G F LL AGA Y knewdfeerfssvit Q DLENE E G NV ------ DC T TSLATSEDVSNS cy NT V KNSQVTTET 345
Cdd:TIGR01782 176 ------------ G V LL SAS Y --------------- Q KRDFA E D NV etenwg TY T SADGGAQGLYFP -- RG V RYRSYRNDR 226
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 346 E SYNGSL SL SY R LG - THSISAQQ LY IIDNE DE SEIA I SQSPAGSSTFS I AGDGI A NRN ------------- H E FN Y E E RQ 411
Cdd:TIGR01782 227 E RKGVNG SL QW R PS d ALELYLDT LY SKYDD DE TRQQ I EFRTLNGGSTV I TSNQT A TSG alvqgtvanlqil V E AR Y N E EK 306
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 412 LNI T QVM -- G QH T F l D YFGIGA D WQ Y TE A KATTDIPTSA --------- DF EF R --------- DTYNS D G S YAGSTIT G DD 471
Cdd:TIGR01782 307 ETT T SLT lg G EW T G - D RWTLDG D LG Y SK A TRDRPDRVTR fftaptpgy DF DY R ggptltlgt PADGD D A S NYTNPAN G EL 385
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 472 N R VIM SY TNM E ERVKS yggn LT L PLS F ESMEVEF K V G YDFSD R ARIFNT S SFAINNS G GS G I S --------- IND G STDA 542
Cdd:TIGR01782 386 R R TQI SY QKA E DSEDA ---- AQ L DAT F DGPFTSL K F G VRYRR R DKTNRG S RYRRSII G AT G A S glagvpsdl AGA G LDGG 461
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 543 L NNSGFL --- T D DFIDN NA VLV D FNEPTAPDADDYIAA ----- QKVD A G YA SFDVFYDQWI R ISG G I RYE EFK Q S S I G TS 614
Cdd:TIGR01782 462 L GGPLTG wdp A D LDAFL NA ARG D AAGGGTYTYASTAPN tytvt EDTT A A YA MANFDTGLRL R GNV G V RYE RTD Q T S D G WQ 541
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 615 S lifdeddlntfy D P DKIQA GSV IT -------- D D WY P A L SVT Y VGG DD YQV R LGYGE T VV RPDF REVVP - VTYY D PL T D 685
Cdd:TIGR01782 542 S ------------ Q P AANGT GSV LV pvsadrdy T D VL P S L NLA Y DLT DD LVL R FAASK T IT RPDF GDLAA n TSLS D DG T G 609
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 686 IRTFGRT G --- I K SSPIK N Y DL RY E Y Y GQA G NSF S V A A FYKDI --------- T APIETVLNIGDEDYSA S - FI NG ET A - E 751
Cdd:TIGR01782 610 GTVTVSG G npd L K PYESD N L DL SL E W Y FGP G GLL S A A V FYKDI knfivttts T ETNDGGGGLVVAGVLV S r PV NG GK A g K 689
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 752 VY G I E AEWL Q DLT F VS --- E G LFTSG N I T LS DSEA SID pal AGTLTNP K KRMT G H S EYVV N LQ L N Y DS ld G MH S SS L V YN 828
Cdd:TIGR01782 690 IR G V E LGYQ Q TFD F LP gpl S G FGVQA N Y T YV DSEA DPS --- VDGVQRR K LPLP G L S KNTA N AT L Y Y EK -- G GF S AR L S YN 764
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*.
gi 490723786 829 VFGERI L AA G VA N -- R D D A Y EQ P FHS LDL VYT Y yp DFNSKIK -- FKVK NL LD E DQE 880
Cdd:TIGR01782 765 YRSDYL L DV G GS N in R L D R Y VD P RGQ LDL SAS Y -- QVSDHLS lg LQAS NL TN E PSR 818
ligand_gated_channel
cd01347 TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
69-905
2.06e-25
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain]
Cd Length: 635
Bit Score: 112.54
E-value: 2.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 69 DILGS E QLSRTGDSDA A SA LRR VT G LTLVD G ----- KF I YV RG L G ERYSSARLN G AYIP S PDLT R N V i P L DIF P ASI IE S 143
Cdd:cd01347 3 SVITA E DIEKQPATSL A DL LRR IP G VSVTR G ggggg ST I SI RG F G PDRTLVLVD G LPLA S SNYG R G V - D L NTI P PEL IE R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 144 MA V Q K AY S PDMPAAFG - GG NID I R TK TAPS EF ta G IE V G AGY DTAS S D gftynrnengipselsqai S TYR G D F SIGNIV 222
Cdd:cd01347 82 VE V L K GP S SALYGSGA i GG VVN I I TK RPTD EF -- G GS V T AGY GSDN S G ------------------- S SGG G G F DVSGAL 140
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 223 S segfedgdltraeqatavnnallkslprdyelkeesldprynikahygdsfeesy FG G KV G FL L A GAY KN ewdfeerfs 302
Cdd:cd01347 141 A ------------------------------------------------------- DD G AF G AR L Y GAY RD --------- 156
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 303 svitqdleneegnvdcttslatsedvs NSCYNTVKNSQVTTET E S YN GSLS L SY R L gthsisaqqlyiidnedeseiais 382
Cdd:cd01347 157 --------------------------- GDGTIDGDGQADDSDE E R YN VAGK L DW R P ------------------------ 185
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 383 qspagsstfsiagdgia NRNHEFN yeerqlnitqvmgqhtfldyfgig A D WQ Y TEAK A TTDIP T SADFEFRDTYNSDG S Y 462
Cdd:cd01347 186 ----------------- DDDTRLT ------------------------ L D AG Y QDQD A DGPGG T LPANGTGSSLGGGP S S 224
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 463 AGSTITGD D nrvims Y TNMEERVK S Y G GNLT L PLSFESMEV ef KVG Y DFS D RARIFNTSSFAI N NS GG SGISINDG S TDA 542
Cdd:cd01347 225 NTNGDRDW D ------ Y RDRYRKRA S L G LEHD L NDTGWTLRA -- NLS Y SYT D NDGDPLILNGGN N AA GG DLGRSGYS S ERD 296
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 543 LNNS GF LTD dfid N NA VLVDFNEP ---- TAPDADDYIAAQ K VD A G YA SFDVFYDQWIRISG G I RY EEFK Q S S IG T SSLIF 618
Cdd:cd01347 297 TTQL GF DAG ---- L NA PFGTGPVA htlt LGVEYRREELDE K QT A L YA QDTIELTDDLTLTL G L RY DHYD Q D S KD T IAGGT 372
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 619 DEDD lnt F Y D pdkiqagsvitd D W Y P A L SVT Y VGG D DYQVRLG Y GETVVR P DFR E VVP v TYYDPL T DIR tf G RTGI K SSP 698
Cdd:cd01347 373 TAKK --- S Y S ------------ H W S P S L GLV Y KLT D GLSLYAS Y SQGFRA P SLG E LYG - GGSHGG T AAV -- G NPNL K PEK 434
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 699 I K N Y D L RYE Y YGQA G NSF S V A A F YK DI TAP I ETVLNIGDEDYSASFI NG ET A EVY G I E A E WLQ DLT fvs E GL FTS G NI T L 778
Cdd:cd01347 435 S K Q Y E L GLK Y DPGD G LTL S A A L F RI DI KNE I VSTPTNTGLGLVTVYV NG GK A RIR G V E L E ASY DLT --- D GL GLT G SY T Y 511
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 779 S D S E ASIDPALAG tltnp KK R MT G HSEYVV NL Q L N Y D sldgmhssslvyn VFG E RIL A A G VANRDDAYEQ ---------- 848
Cdd:cd01347 512 T D T E VKRTDGATT ----- GN R LP G IPKHTA NL G L D Y E ------------- LPD E GLT A G G GVRYRGKQYA dtangnntvk 573
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490723786 849 -- PFHSL DL VYT Y YPDF N SKIKFK V K NL L D E D q EV T QSDIIVRS ---- KEQ G V T FD LS Y SY E F 905
Cdd:cd01347 574 vp GYTLV DL SAS Y QFTK N LTLRLG V N NL F D K D - YY T SLSVRGSG lygy YGP G R T YY LS V SY K F 635
CirA
COG1629 Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
40-885
1.22e-21
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain]
Cd Length: 644
Bit Score: 100.67
E-value: 1.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 40 I EEVV AVG TR LQG S AAA V veerknq AFVADILGS EQL SRTGDS D AASA LRRV T G LTLVD ---- GKF I YV RG L G ERYSSAR 115
Cdd:COG1629 1 L EEVV VTA TR TDE S LQD V ------- PGSVSVISR EQL EDQPAT D LGDL LRRV P G VSVTS aggg AGQ I SI RG F G GGGNRVL 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 116 -- LN G ay I P SP D LTRNVIP L DIFPASI IE SMA V QKAY S PDMPAAFG - GG N I D I R TK TAPSEFTAGIEVGA G ydtassdgf 192
Cdd:COG1629 74 vl VD G -- V P LN D PSGGDGG L SYIDPED IE RVE V LRGP S SALYGSGA l GG V I N I V TK KPKDGKGGEVSASY G --------- 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 193 T Y NRNE ngipselsqaist YRGDF S I GN ivssegfedgdltraeqatavnnallkslprdyelkeesldprynikahygd 272
Cdd:COG1629 143 S Y GTYR ------------- ASLSL S G GN ---------------------------------------------------- 157
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 273 sfeesyfg GK VGFL L AGA Y knewdfeerfssvitqdl ENEE G NV D cttslatsedvsnscyntvknsqv TTETES YN GSL 352
Cdd:COG1629 158 -------- GK LAYR L SAS Y ------------------ RDSD G YR D ------------------------ NSDSDR YN LRA 187
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 353 S L S Y R LG - THSISAQ - QLYII D NEDESEIAISQSPAGSSTFSIAGDGIANRNHEFNY eerqlnitqvmgqhtfld YFGIG 430
Cdd:COG1629 188 K L G Y Q LG d DTRLTLS a SYSDS D QDSPGYLTLAALRPRGAMDDGTNPYSNDTDDNTRD ------------------ RYSLS 249
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 431 ADWQYTEAKATTDIPTSADFEFR D TYNSDGSYAGSTI T GDD nrvimsy T NMEE R VKSYGGN LT LP L S F ES m EVEFK VG Y D 510
Cdd:COG1629 250 LEYEHLGDGLKLSASAYYRYDDT D LDSDFTPTPADGG T LEQ ------- T DFDN R TYGLELR LT YD L G F GG - KHTLL VG L D 321
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 511 FSDR arif NTSSFAINNSG GSG isindgstd A L NNSGFLT DD FIDNNAV lvdfneptapdaddyiaaqkvd A G YA SFDVF 590
Cdd:COG1629 322 YQRQ ---- DLDGSGYPLDL GSG --------- S L PTLTSGA DD DGTTTSL ---------------------- A L YA QDTYK 366
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 591 YDQWIRISG G I RY EEFKQ ssigtsslifded D LNTFYDPDKIQA GS VITDDWY P A L SV TY VGGDDYQVRLG Y GETVVR P D 670
Cdd:COG1629 367 LTDKLTLTA G L RY DYVSY ------------- D VDDTVTGTDSAS GS RSYSAFS P S L GL TY QLSPNLSLYAS Y SRGFRA P T 433
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 671 F R E V vpvty Y DPL TD IRTF G RTGI K SSPIK NY D L RYE Y YGQA G N - S F S V A A FY K D ITAP I ET V LNIG D EDY S ASFI N GET 749
Cdd:COG1629 434 F G E L ----- Y ANG TD PYSV G NPDL K PETST NY E L GLR Y RLLD G R l S L S L A L FY S D VDNE I LS V PLPN D SGF S TYYT N AGK 508
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 750 A EV YG I E A E WLQD LT fvs E GL FTSGNITLS D SE as I D PALA G TLTNPKK R MT G HSEYVV NL Q L N Y DSLD G M h S SS L VYNV 829
Cdd:COG1629 509 A RS YG V E L E LSYQ LT --- P GL SLNASYSYT D AK -- F D DDTD G SADLDGN R LP G VPPLTA NL G L T Y EFPG G W - S LG L GVRY 582
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 490723786 830 F G E R I L aa GV AN RDD a YEQPFHSL DL VYT Y YPDF N SKIKFK V K NL L D EDQEVTQ S D 885
Cdd:COG1629 583 V G D R Y L -- DD AN TQG - APGGYTLV DL GAG Y RFGD N LTLSLG V D NL F D KKYATSL S V 635
TonB_dep_Rec
pfam00593 TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
425-904
3.33e-17
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain]
Cd Length: 475
Bit Score: 85.59
E-value: 3.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 425 DYFGI G A D WQYTEAKATTDIPTSADFEFRDTYNSDGS Y A G STITGD D NRVIM - S Y TNMEERVK S YGGN L T L P L SFE S MEV 503
Cdd:pfam00593 13 TLLTL G Y D YSRYTDGLDLGLTLDGYGNDGGYLGDRPL Y Y G RDYSDT D RKRLS l G Y DYDLGDGL S WLST L R L G L RYS S LDG 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 504 EFKVGYDFSDR A RIFNTSSFAINNS G GS G ISINDGSTDALNNS G FLTD ---- D FIDNNAVLV D FNE P TA P DADD Y IAAQK 579
Cdd:pfam00593 93 DYTSNSSGLSG A GDYLSDDRLYGLY G LD G DLELSLDLSHDLLL G VELR tagl D YRRLDDDAY D PYD P AN P SSSS Y SDTTT 172
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 580 VDA G - Y ASFDVFYDQWIRISG G I RY EEFKQSS igtsslifdeddlnt FYDPDKIQAG S VITDDWY P A L SVT Y VGG D DYQV 658
Cdd:pfam00593 173 DSY G l Y LQDNIKLTDRLTLTL G L RY DHYSTDG --------------- DDGNGGGDNF S RSYSAFS P R L GLV Y KPT D NLSL 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 659 RLG Y GETVVR P DFR E VVP v TYYDPLTDIRTF G RTGI K SSPIK NY D L RYE Y YGQAGN s F S V A A FY K DI TAP I ETV - LNI G D 737
Cdd:pfam00593 238 YAS Y SRGFRA P SLG E LYG - SGSGGGGGAVAG G NPDL K PETSD NY E L GLK Y DDGRLS - L S L A L FY I DI KNL I TSD p DGP G L 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 738 EDYSASFI N GET A EVY G I E A E WLQD L tfv SEGLFTS G NI T LS D SEASI D PALA G tltnpk KRMTGHSEYVV NL Q L N YD SL 817
Cdd:pfam00593 316 GGTVYTYT N VGK A RIR G V E L E LSGR L --- WGLGLSG G GY T YT D ADDDA D ADDT G ------ NPLPNVPRHTA NL G L T YD FP 386
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 818 D G M -- HSSSLV Y NVF GER IL aagv ANRDDAYEQ P - FHSL DL VYT Y YPDF N SKIKFK V K NL L D EDQE --- VTQSDIIVRSK 891
Cdd:pfam00593 387 L G G wg ARLGAR Y VGS GER RY ---- GDAANTFKT P g YTLV DL SAG Y RLNK N LTLRLG V N NL F D KYYK ryy SSGGGNLGGYP 462
490
....*....|...
gi 490723786 892 EQ G V TF D L SY SY E 904
Cdd:pfam00593 463 GP G R TF Y L GL SY K 475
Name
Accession
Description
Interval
E-value
TonB-Xanth-Caul
TIGR01782 TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
40-880
1.18e-50
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain]
Cd Length: 845
Bit Score: 192.16
E-value: 1.18e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 40 IEE V VAV G T R lq G S AAAVVEERKNQAF V A D ILGS E QLSRTG D SDA A S AL R RV T G LTLV ---- D G KFIY VRGLG ER Y SSAR 115
Cdd:TIGR01782 1 LDA V QVT G Q R -- A S LEKAIDAKRDADS V V D VISA E DIGKLP D VNV A E AL Q RV P G VSIE rdqg E G RYVS VRGLG PS Y NRTT 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 116 LNG AY I P S P D LTRNVIP LD IF P ASIIESMA V Q K AYSP DM PAAFG GG NI D I RT KTA ---- PSEFTAGIEV G A g Y D T A SS D G 191
Cdd:TIGR01782 79 LNG RT I A S T D SGGRAFS LD LL P SELVSGVE V Y K TPTA DM DEGGI GG TV D L RT RSP fdyd GRTLSGSAQG G Y - N D L A GK D K 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 192 ftynrnengipselsqai STY RG DF S IGNI vsseg F E DG DL traeqatavnnallkslprdyelkeesldprynikahyg 271
Cdd:TIGR01782 158 ------------------ PGP RG AA S YSWT ----- F G DG QF --------------------------------------- 175
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 272 dsfeesyfggkv G F LL AGA Y knewdfeerfssvit Q DLENE E G NV ------ DC T TSLATSEDVSNS cy NT V KNSQVTTET 345
Cdd:TIGR01782 176 ------------ G V LL SAS Y --------------- Q KRDFA E D NV etenwg TY T SADGGAQGLYFP -- RG V RYRSYRNDR 226
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 346 E SYNGSL SL SY R LG - THSISAQQ LY IIDNE DE SEIA I SQSPAGSSTFS I AGDGI A NRN ------------- H E FN Y E E RQ 411
Cdd:TIGR01782 227 E RKGVNG SL QW R PS d ALELYLDT LY SKYDD DE TRQQ I EFRTLNGGSTV I TSNQT A TSG alvqgtvanlqil V E AR Y N E EK 306
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 412 LNI T QVM -- G QH T F l D YFGIGA D WQ Y TE A KATTDIPTSA --------- DF EF R --------- DTYNS D G S YAGSTIT G DD 471
Cdd:TIGR01782 307 ETT T SLT lg G EW T G - D RWTLDG D LG Y SK A TRDRPDRVTR fftaptpgy DF DY R ggptltlgt PADGD D A S NYTNPAN G EL 385
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 472 N R VIM SY TNM E ERVKS yggn LT L PLS F ESMEVEF K V G YDFSD R ARIFNT S SFAINNS G GS G I S --------- IND G STDA 542
Cdd:TIGR01782 386 R R TQI SY QKA E DSEDA ---- AQ L DAT F DGPFTSL K F G VRYRR R DKTNRG S RYRRSII G AT G A S glagvpsdl AGA G LDGG 461
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 543 L NNSGFL --- T D DFIDN NA VLV D FNEPTAPDADDYIAA ----- QKVD A G YA SFDVFYDQWI R ISG G I RYE EFK Q S S I G TS 614
Cdd:TIGR01782 462 L GGPLTG wdp A D LDAFL NA ARG D AAGGGTYTYASTAPN tytvt EDTT A A YA MANFDTGLRL R GNV G V RYE RTD Q T S D G WQ 541
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 615 S lifdeddlntfy D P DKIQA GSV IT -------- D D WY P A L SVT Y VGG DD YQV R LGYGE T VV RPDF REVVP - VTYY D PL T D 685
Cdd:TIGR01782 542 S ------------ Q P AANGT GSV LV pvsadrdy T D VL P S L NLA Y DLT DD LVL R FAASK T IT RPDF GDLAA n TSLS D DG T G 609
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 686 IRTFGRT G --- I K SSPIK N Y DL RY E Y Y GQA G NSF S V A A FYKDI --------- T APIETVLNIGDEDYSA S - FI NG ET A - E 751
Cdd:TIGR01782 610 GTVTVSG G npd L K PYESD N L DL SL E W Y FGP G GLL S A A V FYKDI knfivttts T ETNDGGGGLVVAGVLV S r PV NG GK A g K 689
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 752 VY G I E AEWL Q DLT F VS --- E G LFTSG N I T LS DSEA SID pal AGTLTNP K KRMT G H S EYVV N LQ L N Y DS ld G MH S SS L V YN 828
Cdd:TIGR01782 690 IR G V E LGYQ Q TFD F LP gpl S G FGVQA N Y T YV DSEA DPS --- VDGVQRR K LPLP G L S KNTA N AT L Y Y EK -- G GF S AR L S YN 764
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*.
gi 490723786 829 VFGERI L AA G VA N -- R D D A Y EQ P FHS LDL VYT Y yp DFNSKIK -- FKVK NL LD E DQE 880
Cdd:TIGR01782 765 YRSDYL L DV G GS N in R L D R Y VD P RGQ LDL SAS Y -- QVSDHLS lg LQAS NL TN E PSR 818
ligand_gated_channel
cd01347 TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
69-905
2.06e-25
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain]
Cd Length: 635
Bit Score: 112.54
E-value: 2.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 69 DILGS E QLSRTGDSDA A SA LRR VT G LTLVD G ----- KF I YV RG L G ERYSSARLN G AYIP S PDLT R N V i P L DIF P ASI IE S 143
Cdd:cd01347 3 SVITA E DIEKQPATSL A DL LRR IP G VSVTR G ggggg ST I SI RG F G PDRTLVLVD G LPLA S SNYG R G V - D L NTI P PEL IE R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 144 MA V Q K AY S PDMPAAFG - GG NID I R TK TAPS EF ta G IE V G AGY DTAS S D gftynrnengipselsqai S TYR G D F SIGNIV 222
Cdd:cd01347 82 VE V L K GP S SALYGSGA i GG VVN I I TK RPTD EF -- G GS V T AGY GSDN S G ------------------- S SGG G G F DVSGAL 140
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 223 S segfedgdltraeqatavnnallkslprdyelkeesldprynikahygdsfeesy FG G KV G FL L A GAY KN ewdfeerfs 302
Cdd:cd01347 141 A ------------------------------------------------------- DD G AF G AR L Y GAY RD --------- 156
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 303 svitqdleneegnvdcttslatsedvs NSCYNTVKNSQVTTET E S YN GSLS L SY R L gthsisaqqlyiidnedeseiais 382
Cdd:cd01347 157 --------------------------- GDGTIDGDGQADDSDE E R YN VAGK L DW R P ------------------------ 185
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 383 qspagsstfsiagdgia NRNHEFN yeerqlnitqvmgqhtfldyfgig A D WQ Y TEAK A TTDIP T SADFEFRDTYNSDG S Y 462
Cdd:cd01347 186 ----------------- DDDTRLT ------------------------ L D AG Y QDQD A DGPGG T LPANGTGSSLGGGP S S 224
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 463 AGSTITGD D nrvims Y TNMEERVK S Y G GNLT L PLSFESMEV ef KVG Y DFS D RARIFNTSSFAI N NS GG SGISINDG S TDA 542
Cdd:cd01347 225 NTNGDRDW D ------ Y RDRYRKRA S L G LEHD L NDTGWTLRA -- NLS Y SYT D NDGDPLILNGGN N AA GG DLGRSGYS S ERD 296
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 543 LNNS GF LTD dfid N NA VLVDFNEP ---- TAPDADDYIAAQ K VD A G YA SFDVFYDQWIRISG G I RY EEFK Q S S IG T SSLIF 618
Cdd:cd01347 297 TTQL GF DAG ---- L NA PFGTGPVA htlt LGVEYRREELDE K QT A L YA QDTIELTDDLTLTL G L RY DHYD Q D S KD T IAGGT 372
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 619 DEDD lnt F Y D pdkiqagsvitd D W Y P A L SVT Y VGG D DYQVRLG Y GETVVR P DFR E VVP v TYYDPL T DIR tf G RTGI K SSP 698
Cdd:cd01347 373 TAKK --- S Y S ------------ H W S P S L GLV Y KLT D GLSLYAS Y SQGFRA P SLG E LYG - GGSHGG T AAV -- G NPNL K PEK 434
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 699 I K N Y D L RYE Y YGQA G NSF S V A A F YK DI TAP I ETVLNIGDEDYSASFI NG ET A EVY G I E A E WLQ DLT fvs E GL FTS G NI T L 778
Cdd:cd01347 435 S K Q Y E L GLK Y DPGD G LTL S A A L F RI DI KNE I VSTPTNTGLGLVTVYV NG GK A RIR G V E L E ASY DLT --- D GL GLT G SY T Y 511
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 779 S D S E ASIDPALAG tltnp KK R MT G HSEYVV NL Q L N Y D sldgmhssslvyn VFG E RIL A A G VANRDDAYEQ ---------- 848
Cdd:cd01347 512 T D T E VKRTDGATT ----- GN R LP G IPKHTA NL G L D Y E ------------- LPD E GLT A G G GVRYRGKQYA dtangnntvk 573
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490723786 849 -- PFHSL DL VYT Y YPDF N SKIKFK V K NL L D E D q EV T QSDIIVRS ---- KEQ G V T FD LS Y SY E F 905
Cdd:cd01347 574 vp GYTLV DL SAS Y QFTK N LTLRLG V N NL F D K D - YY T SLSVRGSG lygy YGP G R T YY LS V SY K F 635
CirA
COG1629 Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
40-885
1.22e-21
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain]
Cd Length: 644
Bit Score: 100.67
E-value: 1.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 40 I EEVV AVG TR LQG S AAA V veerknq AFVADILGS EQL SRTGDS D AASA LRRV T G LTLVD ---- GKF I YV RG L G ERYSSAR 115
Cdd:COG1629 1 L EEVV VTA TR TDE S LQD V ------- PGSVSVISR EQL EDQPAT D LGDL LRRV P G VSVTS aggg AGQ I SI RG F G GGGNRVL 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 116 -- LN G ay I P SP D LTRNVIP L DIFPASI IE SMA V QKAY S PDMPAAFG - GG N I D I R TK TAPSEFTAGIEVGA G ydtassdgf 192
Cdd:COG1629 74 vl VD G -- V P LN D PSGGDGG L SYIDPED IE RVE V LRGP S SALYGSGA l GG V I N I V TK KPKDGKGGEVSASY G --------- 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 193 T Y NRNE ngipselsqaist YRGDF S I GN ivssegfedgdltraeqatavnnallkslprdyelkeesldprynikahygd 272
Cdd:COG1629 143 S Y GTYR ------------- ASLSL S G GN ---------------------------------------------------- 157
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 273 sfeesyfg GK VGFL L AGA Y knewdfeerfssvitqdl ENEE G NV D cttslatsedvsnscyntvknsqv TTETES YN GSL 352
Cdd:COG1629 158 -------- GK LAYR L SAS Y ------------------ RDSD G YR D ------------------------ NSDSDR YN LRA 187
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 353 S L S Y R LG - THSISAQ - QLYII D NEDESEIAISQSPAGSSTFSIAGDGIANRNHEFNY eerqlnitqvmgqhtfld YFGIG 430
Cdd:COG1629 188 K L G Y Q LG d DTRLTLS a SYSDS D QDSPGYLTLAALRPRGAMDDGTNPYSNDTDDNTRD ------------------ RYSLS 249
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 431 ADWQYTEAKATTDIPTSADFEFR D TYNSDGSYAGSTI T GDD nrvimsy T NMEE R VKSYGGN LT LP L S F ES m EVEFK VG Y D 510
Cdd:COG1629 250 LEYEHLGDGLKLSASAYYRYDDT D LDSDFTPTPADGG T LEQ ------- T DFDN R TYGLELR LT YD L G F GG - KHTLL VG L D 321
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 511 FSDR arif NTSSFAINNSG GSG isindgstd A L NNSGFLT DD FIDNNAV lvdfneptapdaddyiaaqkvd A G YA SFDVF 590
Cdd:COG1629 322 YQRQ ---- DLDGSGYPLDL GSG --------- S L PTLTSGA DD DGTTTSL ---------------------- A L YA QDTYK 366
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 591 YDQWIRISG G I RY EEFKQ ssigtsslifded D LNTFYDPDKIQA GS VITDDWY P A L SV TY VGGDDYQVRLG Y GETVVR P D 670
Cdd:COG1629 367 LTDKLTLTA G L RY DYVSY ------------- D VDDTVTGTDSAS GS RSYSAFS P S L GL TY QLSPNLSLYAS Y SRGFRA P T 433
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 671 F R E V vpvty Y DPL TD IRTF G RTGI K SSPIK NY D L RYE Y YGQA G N - S F S V A A FY K D ITAP I ET V LNIG D EDY S ASFI N GET 749
Cdd:COG1629 434 F G E L ----- Y ANG TD PYSV G NPDL K PETST NY E L GLR Y RLLD G R l S L S L A L FY S D VDNE I LS V PLPN D SGF S TYYT N AGK 508
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 750 A EV YG I E A E WLQD LT fvs E GL FTSGNITLS D SE as I D PALA G TLTNPKK R MT G HSEYVV NL Q L N Y DSLD G M h S SS L VYNV 829
Cdd:COG1629 509 A RS YG V E L E LSYQ LT --- P GL SLNASYSYT D AK -- F D DDTD G SADLDGN R LP G VPPLTA NL G L T Y EFPG G W - S LG L GVRY 582
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 490723786 830 F G E R I L aa GV AN RDD a YEQPFHSL DL VYT Y YPDF N SKIKFK V K NL L D EDQEVTQ S D 885
Cdd:COG1629 583 V G D R Y L -- DD AN TQG - APGGYTLV DL GAG Y RFGD N LTLSLG V D NL F D KKYATSL S V 635
FepA
COG4771 Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
16-862
7.74e-20
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain]
Cd Length: 612
Bit Score: 94.54
E-value: 7.74e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 16 L GLVAHSTSLI AAQA DEQ L T - NEQ E I EEVV AVG TR LQ gsaaavv EERKNQAFVADILGS E QLSRT G DS D A A S ALR RVT G L 94
Cdd:COG4771 2 L LASLLLLLAL AAQA ADA L A e DAT E L EEVV VTA TR TE ------- QSLSDAPASVSVITA E EIEKL G AT D L A D ALR LLP G V 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 95 TLVD ------ GKF I YV RGLG ERYSSARLN G AYIPS P D L T r NVIP L DIF P ASI IE SMA V QK ay S P d MP A AF G ---- GG N I D 164
Cdd:COG4771 75 SVTR sggrgg SSG I SI RGLG GDRVLVLID G VPVNN P A L G - GGGD L SYI P PDD IE RIE V IR -- G P - AS A LY G sdai GG V I N 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 165 I R TK TAPS E FTAGIEV G A G ydtassdgftynrnengipsel S QAIS TY R G DF S I G nivssegfedgdltraeqatavnna 244
Cdd:COG4771 151 I I TK KPTD E LEGSVSL G Y G ---------------------- S NGNG TY S G SL S L G ------------------------- 183
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 245 llkslprdyelkeesldprynikahygdsfees YF G G K VG FLL A G A Y knewdfeerfssvitqdl ENEE G NV D cttslat 324
Cdd:COG4771 184 --------------------------------- GP G D K LS FLL S G S Y ------------------ RDRD G YL D ------- 205
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 325 sedvsnscy NTVKNSQVTTET E S YN GSLS L S YRL G - T H SI S AQQL Y IIDNE D ESEIAISQSPAG S STFSIAGDGIANR N H 403
Cdd:COG4771 206 --------- YRNGGFVGNSGY E R YN LNAK L G YRL S d N H RL S LSGG Y SRQDR D GGPPTLGDTEIS S DNAGDRDTTTDRG N Y 276
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 404 EFN Y eerqlnitqvmg QHTFL D YFGIGADWQY T EAKA T TDIPTSADFE F R D T ynsdgsyagstitgddnrvimsytnmee 483
Cdd:COG4771 277 SLR Y ------------ NGDLG D NLDLSLYYSR T DRDS T NGSLGGSTGS F S D S ---------------------------- 316
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 484 RVKS YG GN L T L PLSF e SMEVEFKV G YDF sdrarifntssfa INNSGG S GISINDGSTDALNNSG F LT D DF idnnavlv DF 563
Cdd:COG4771 317 DDTT YG LE L D L TYPL - GGNHTLTL G AEY ------------- RYDDLD S SSFLGGADASRDTYGL F AQ D EW -------- KL 374
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 564 NE ptapdaddyiaaqkvdagyasfdvfydq WIRISG G I RY EEFKQS sigtsslifdeddlntfydpdkiqa G SVITDDWY 643
Cdd:COG4771 375 TD ---------------------------- KLTLTA G L RY DYYSTF ------------------------- G ASNYTAFS 401
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 644 P A L SVT Y VGG D DYQV R LG YG ETVVR P DFR E VVP vt YYDPLTDIRTF G RTGI K SSPIK NY D L RY EY YGQA G N - S F S VAA FY 722
Cdd:COG4771 402 P R L GLR Y DLS D NLTL R AS YG RGFRA P SLA E LYG -- SGTGTPGRYVL G NPDL K PETSD NY E L GL EY RLGN G G l S L S LTG FY 479
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 723 K DI TAP I ET V LNIGDEDYSASFI N GET A EV YG I E A E WLQD L T fvs E GL FTSGNI T LS DS EASID palagtlt NPKKRMTG 802
Cdd:COG4771 480 T DI KDL I VL V PVGPGPGDVLQYE N VGK A RT YG L E L E LKYR L G --- K GL TLTASY T YL DS KIDDG -------- DTGEPLPN 548
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 803 HSEYVV NL Q L N Y DSLDGMHSSS L VYNVF G ERILA ag VAN R DDA Y EQPFHS LDL VYT Y YPD 862
Cdd:COG4771 549 VPPHKA NL G L D Y RLPKWWLLLL L TRYYG G RYVTP -- PSG R LEG Y TPGYTL LDL RAS Y KLT 606
TonB_dep_Rec
pfam00593 TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
425-904
3.33e-17
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain]
Cd Length: 475
Bit Score: 85.59
E-value: 3.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 425 DYFGI G A D WQYTEAKATTDIPTSADFEFRDTYNSDGS Y A G STITGD D NRVIM - S Y TNMEERVK S YGGN L T L P L SFE S MEV 503
Cdd:pfam00593 13 TLLTL G Y D YSRYTDGLDLGLTLDGYGNDGGYLGDRPL Y Y G RDYSDT D RKRLS l G Y DYDLGDGL S WLST L R L G L RYS S LDG 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 504 EFKVGYDFSDR A RIFNTSSFAINNS G GS G ISINDGSTDALNNS G FLTD ---- D FIDNNAVLV D FNE P TA P DADD Y IAAQK 579
Cdd:pfam00593 93 DYTSNSSGLSG A GDYLSDDRLYGLY G LD G DLELSLDLSHDLLL G VELR tagl D YRRLDDDAY D PYD P AN P SSSS Y SDTTT 172
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 580 VDA G - Y ASFDVFYDQWIRISG G I RY EEFKQSS igtsslifdeddlnt FYDPDKIQAG S VITDDWY P A L SVT Y VGG D DYQV 658
Cdd:pfam00593 173 DSY G l Y LQDNIKLTDRLTLTL G L RY DHYSTDG --------------- DDGNGGGDNF S RSYSAFS P R L GLV Y KPT D NLSL 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 659 RLG Y GETVVR P DFR E VVP v TYYDPLTDIRTF G RTGI K SSPIK NY D L RYE Y YGQAGN s F S V A A FY K DI TAP I ETV - LNI G D 737
Cdd:pfam00593 238 YAS Y SRGFRA P SLG E LYG - SGSGGGGGAVAG G NPDL K PETSD NY E L GLK Y DDGRLS - L S L A L FY I DI KNL I TSD p DGP G L 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 738 EDYSASFI N GET A EVY G I E A E WLQD L tfv SEGLFTS G NI T LS D SEASI D PALA G tltnpk KRMTGHSEYVV NL Q L N YD SL 817
Cdd:pfam00593 316 GGTVYTYT N VGK A RIR G V E L E LSGR L --- WGLGLSG G GY T YT D ADDDA D ADDT G ------ NPLPNVPRHTA NL G L T YD FP 386
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 818 D G M -- HSSSLV Y NVF GER IL aagv ANRDDAYEQ P - FHSL DL VYT Y YPDF N SKIKFK V K NL L D EDQE --- VTQSDIIVRSK 891
Cdd:pfam00593 387 L G G wg ARLGAR Y VGS GER RY ---- GDAANTFKT P g YTLV DL SAG Y RLNK N LTLRLG V N NL F D KYYK ryy SSGGGNLGGYP 462
490
....*....|...
gi 490723786 892 EQ G V TF D L SY SY E 904
Cdd:pfam00593 463 GP G R TF Y L GL SY K 475
FecA
COG4772 Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
486-878
9.86e-13
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain]
Cd Length: 681
Bit Score: 71.88
E-value: 9.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 486 K SYG G -- N LT LPLSFESMEVEFK VG YDF ---- S DR ARIF NT SSFAINNS G GS gisi N D GSTD A LNNSGFLTDD F I dnnav 559
Cdd:COG4772 320 R SYG I ep R LT HRFELGGVPHTLE VG LRY hree E DR KQYV NT YGQGRSGA G LR ---- R D RRFS A DALAAYAQNR F E ----- 390
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 560 lvdfneptapdaddyiaaqkvdagyasfdv FYDQW i RISG G I RYE EFKQSSIGTS S LIFDE DD lntfydpdkiq A GS VIT 639
Cdd:COG4772 391 ------------------------------ LTGRL - TLTP G L RYE HIRRDRTDRY S TRTGG DD ----------- S GS NSY 428
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 640 DDWY P A L SVT Y VGG D DY Q VRLGYGETVVR P D F REVV pvtyydpltd IRTF G RTGI K SSPIK NY D L RYEYYGQA G N S FS VA 719
Cdd:COG4772 429 SEFL P G L GLL Y QLT D NL Q LYANVSRGFEP P T F GDLA ---------- YGNG G NPDL K PEKSW NY E L GTRGRIGN G L S AE VA 498
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 720 A FY K D ITAPIETVLNI G DED ys AS F I N GETAEVY G I E AEWLQ DL - TFVSE GL FTSGNI T LS D S E -- ASID P AL AG tltnp 796
Cdd:COG4772 499 L FY I D YDNELGSCSAA G GDR -- ST F T N AGETRHQ G L E LALDY DL l KGGGL GL PLFAAY T YT D A E ft SDFG P VF AG ----- 571
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 797 k K R MTGHSEYVVNLQ L N Y D ------ S L D G MHS S S l VYNVFGER i L A A G VANRDDA Y eqpf HS LDL V -- Y TYYPDF ns KIK 868
Cdd:COG4772 572 - N R LPYVPRHQLTAG L G Y E hggwta N L N G RYV S E - QFTDAANT - V A D G SFGKIPS Y ---- TV LDL S as Y DFGKNL -- SLF 642
410
....*....|
gi 490723786 869 FK V K NL L D ED 878
Cdd:COG4772 643 AG V N NL F D KR 652
Plug
pfam07715 TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
62-163
4.38e-08
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain]
Cd Length: 107
Bit Score: 51.89
E-value: 4.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 62 KNQAFVADILGS E QLSRT G DSDA A S ALR R V T G LTLVD G ----- KF I YV RG L G ERYSSARLN G ay I P SPDLTRNVIP L DIF 136
Cdd:pfam07715 3 RDTPGSVSVVTA E DIEDQ G ATNL A D ALR G V P G VSVSS G ggggg SS I SI RG F G SNRVLVLVD G -- V P LNSGGGGSVD L NSI 80
90 100
....*....|....*....|....*..
gi 490723786 137 PASI IE SMA V Q K AYS pdm P A AF G G G N I 163
Cdd:pfam07715 81 DPED IE RVE V L K GPA --- S A LY G S G A I 104
BtuB
COG4206 Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
43-215
5.68e-06
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain]
Cd Length: 276
Bit Score: 49.10
E-value: 5.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 43 VV AVG TRL Q gsaaavv EERKNQAFVADILGS E Q L S R T G DSDA A S ALRRV T G LTLVD ------ GKF I YV RGLG ERYSSARL 116
Cdd:COG4206 1 VV VTA TRL E ------- QSKSDLTGSVTVIDA E E L E R S G ATSL A D ALRRV P G VQVSS sggpgs AAS I SI RGLG SNQTLVLI 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 117 N G ay I P SP D LTRNVIP L DIF P ASI IE SMA V Q K AYS pdm P A AF G ---- GG N I D I R TK TAPSE F TAGIEVGA G YDTASSDGF 192
Cdd:COG4206 74 D G -- V P LN D PSLGGVD L SLI P PDD IE RIE V L K GAA --- S A LY G sdai GG V I N I T TK KGKKG F KGSVSASY G SFGTRRLSA 148
170 180
....*....|....*....|...
gi 490723786 193 TYNRNENGI ps EL S QAI S TY R G D 215
Cdd:COG4206 149 SLSGGAGKF -- SY S LSA S YR R S D 169
TonB-siderophor
TIGR01783 TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
445-905
4.36e-05
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain]
Cd Length: 651
Bit Score: 47.41
E-value: 4.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 445 P T SADFEFRDT Y N SDG SYA G stitgddnrvi M S Y T NMEERVKSYGGNLT L PLS FE SMEV E FKVGYDF S DRA R IF N tssfa 524
Cdd:TIGR01783 259 D T DSNQVQASG Y S SDG GLF G ----------- R S L T VVNVKQDRVQIDAG L DGE FE TGPI E HDLLLGV S YGQ R TT N ----- 322
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 525 i NNSGGSGI S I N DG S TD A LNNSGFLTD D F idnnavlvdfne P TAPDADDY iaa Q K VDA G Y A SFDVFYDQWIRISG G I RY E 604
Cdd:TIGR01783 323 - RFNNTGYP S D N IY S LT A TSSARTDIG D S ------------ P KDRALSST --- T K ALN G V A LQRILLADKWTLTL G G RY D 386
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 605 EFKQS S IGTSSLIFDED D LNT F Y dpdkiqagsvitddwy P A L S V T Y VGG DD YQVRLG Y G E tvvrp D F R evv P VT YY DPLT 684
Cdd:TIGR01783 387 SVDVK S NNGVAGSTGKR D DSQ F T ---------------- P S L G V A Y KPT DD WSLYAS Y A E ----- S F K --- P GG YY PKGA 442
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 685 D irt FGRTGIKSSPI KNY D L RYE Y YGQAGNSFSV A A F YKDIT apietvl N IGDE D YSASFI -- N GETAEVY G I E A E WLQD 762
Cdd:TIGR01783 443 G --- NSGDILEPEKG KNY E L GVR Y DLGDSLLATA A L F RITKD ------- N QLVQ D PVNGTF sv N AGKTRNR G V E L E ARGY 512
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 763 LT F vse GL FT S GNI T LS D S E ASI D PAL agtl TNPKKRMTGHSEYVVN L QLN Y DSLD G MHSSS L VYN V F -- G ERILAA G VA 840
Cdd:TIGR01783 513 LT P --- GL SL S AGY T YT D A E FTE D TNG ---- DTQGNTVPFVPKHTAS L WAS Y APPV G DNGLT L GGG V Q yt G KAYVDG G NT 585
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 841 NRDDA Y E qp FHS L DLV Y TYYPDF N SKIKFK V K NL L D E D ----- QEVTQ S DI I V rs KEQGV T FD LS Y SY E F 905
Cdd:TIGR01783 586 GKVPS Y T -- VVD L SVR Y DLTKKK N LTLALN V N NL F D R D yytsg YRWGP S AY I Y -- PGAPR T VG LS V SY D F 651
OMP_b-brl_3
pfam14905 Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...
431-814
1.09e-04
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain]
Cd Length: 407
Bit Score: 45.73
E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 431 A D WQ Y T eaka TTDIPTSA D FEFR D TY N SD G SYAGSTIT gddnrvim SYT N MEERVKS Y GGN L -- T L PL SFESM eve FKV G 508
Cdd:pfam14905 12 F D AD Y S ---- NYNNDSDS D YTNS D YN N PG G LEPFNDSL -------- QRN N SPSNINI Y TAQ L dy T K PL GKKGK --- LEA G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 509 YDF S D R arifntssfai NN S ggsgisi ND GSTDA L N N SGFLT D DFID N navlvdfneptapdad D YIAAQKVD A G YAS FD 588
Cdd:pfam14905 77 AKY S F R ----------- NN D ------- ND YDYEN L D N GEWVP D PSRS N ---------------- D FDYKENIY A A YAS YS 122
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 589 VFYDQ W i RISG G I R Y E efk QSS I GTS S LIFD E DDLNTF ydpdkiqagsvit DDWY P AL S VT Y VGG D D -- Y Q VR L G Y GETV 666
Cdd:pfam14905 123 KKFGK W - SYQA G L R A E --- YTD I DGD S VTTN E TFKRNY ------------- FNLF P SA S LS Y KLN D N ns L Q LS L Y Y RRII 185
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490723786 667 V RP DFREVV P - VT Y Y DP LT d IRT f G RTGI K SSPIKNYD L R Y E Y Y gqag NSF S VAAF Y KDITAP I ETVLNIG D E D --- Y S a 742
Cdd:pfam14905 186 N RP SYWDLN P f RN Y S DP YN - YSQ - G NPNL K PEYTNSFE L G Y T Y K ---- WKL S LSLS Y RYTNDV I QQTFITD D N D nvt Y T - 258
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490723786 743 SFI N GETAEV YG I E AEWLQDL T fvs EGLFTS GN ITLSDSEAS ID PA L AGTLT N PK krmtghse YVV NL QLNY 814
Cdd:pfam14905 259 TYE N LGKSNS YG L E LSASFNP T --- KWWSLN GN LNGYYNKYK ID GS L NSDFS N FG -------- FNW NL NNTF 319
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
