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Conserved domains on  [gi|490987206|ref|WP_004848939|]
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MULTISPECIES: DUF4387 domain-containing protein [Klebsiella]

Protein Classification

DUF4387 domain-containing protein( domain architecture ID 10626800)

DUF4387 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4387 pfam14330
Domain of unknown function (DUF4387); This family of proteins is functionally uncharacterized. ...
 5-102 2.10e-59

Domain of unknown function (DUF4387); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are approximately 110 amino acids in length. There is a conserved RSKN sequence motif.


:

Pssm-ID: 464137  Cd Length: 98  Bit Score: 176.95  E-value: 2.10e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490987206    5 LCSLAQVIRSKNAGPYELVLDILFKTREDYQRVKRSEQLTPQLIAGLYNVKPDFIHRIIWFDPANAVKIVMPRDIISGNV 84
Cdd:pfam14330   1 LSDLARVIRSKNAGPFEITFDIIFKDRETYERVKASGALTPELIAKLYGIDPEDIVSIVFFDPALAIKITIPRPIPSGSL 80

                          90
                  ....*....|....*...
gi 490987206   85 GDNDVYGAQQHAPLLSIE 102
Cdd:pfam14330  81 GERDVHGAQQHAPLLDLE 98
 
Name Accession Description Interval E-value
DUF4387 pfam14330
Domain of unknown function (DUF4387); This family of proteins is functionally uncharacterized. ...
 5-102 2.10e-59

Domain of unknown function (DUF4387); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are approximately 110 amino acids in length. There is a conserved RSKN sequence motif.


Pssm-ID: 464137  Cd Length: 98  Bit Score: 176.95  E-value: 2.10e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490987206    5 LCSLAQVIRSKNAGPYELVLDILFKTREDYQRVKRSEQLTPQLIAGLYNVKPDFIHRIIWFDPANAVKIVMPRDIISGNV 84
Cdd:pfam14330   1 LSDLARVIRSKNAGPFEITFDIIFKDRETYERVKASGALTPELIAKLYGIDPEDIVSIVFFDPALAIKITIPRPIPSGSL 80

                          90
                  ....*....|....*...
gi 490987206   85 GDNDVYGAQQHAPLLSIE 102
Cdd:pfam14330  81 GERDVHGAQQHAPLLDLE 98
 
Name Accession Description Interval E-value
DUF4387 pfam14330
Domain of unknown function (DUF4387); This family of proteins is functionally uncharacterized. ...
 5-102 2.10e-59

Domain of unknown function (DUF4387); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are approximately 110 amino acids in length. There is a conserved RSKN sequence motif.


Pssm-ID: 464137  Cd Length: 98  Bit Score: 176.95  E-value: 2.10e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490987206    5 LCSLAQVIRSKNAGPYELVLDILFKTREDYQRVKRSEQLTPQLIAGLYNVKPDFIHRIIWFDPANAVKIVMPRDIISGNV 84
Cdd:pfam14330   1 LSDLARVIRSKNAGPFEITFDIIFKDRETYERVKASGALTPELIAKLYGIDPEDIVSIVFFDPALAIKITIPRPIPSGSL 80

                          90
                  ....*....|....*...
gi 490987206   85 GDNDVYGAQQHAPLLSIE 102
Cdd:pfam14330  81 GERDVHGAQQHAPLLDLE 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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