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Conserved domains on  [gi|490994164|ref|WP_004855895|]
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MULTISPECIES: ATPase AAA [Klebsiella]

Protein Classification

AAA family ATPase( domain architecture ID 11428957)

AAA family ATPase containing an AAA (ATPases Associated with various cellular Activities) domain, may function as an ATP-dependent endonuclease or the ATPase component of an ABC-type transporter

CATH:  3.40.50.300
Gene Ontology:  GO:0005524|GO:0016887
PubMed:  15037234|18208389|17897320|18466635|16072036|11916378|15037233
SCOP:  2000039

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG0645 COG0645
Predicted kinase, contains AAA domain [General function prediction only];
12-156 4.14e-10

Predicted kinase, contains AAA domain [General function prediction only];


:

Pssm-ID: 440410 [Multi-domain]  Cd Length: 164  Bit Score: 55.69  E-value: 4.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490994164  12 VILINGIPASGKSTVTRQLSAAFNLPQLTIDGIKEP-FMACFTGIDRTfnRQLGCAAYEVIWSIVGQS-PAGCIWLIDAW 89
Cdd:COG0645    1 LILVCGLPGSGKSTLARALAERLGAVRLRSDVVRKRlFGAGLAPLERS--PEATARTYARLLALARELlAAGRSVILDAT 78

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490994164  90 FGFQP-RDTLQQLLQHAGVEkVLEVWNHISPELAVSRYASRLQDRKPGHPGEEylpELAQLAQQAEPM 156
Cdd:COG0645   79 FLRRAqREAFRALAEEAGAP-FVLIWLDAPEEVLRERLEARNAEGGDSDATWE---VLERQLAFEEPL 142
 
Name Accession Description Interval E-value
COG0645 COG0645
Predicted kinase, contains AAA domain [General function prediction only];
12-156 4.14e-10

Predicted kinase, contains AAA domain [General function prediction only];


Pssm-ID: 440410 [Multi-domain]  Cd Length: 164  Bit Score: 55.69  E-value: 4.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490994164  12 VILINGIPASGKSTVTRQLSAAFNLPQLTIDGIKEP-FMACFTGIDRTfnRQLGCAAYEVIWSIVGQS-PAGCIWLIDAW 89
Cdd:COG0645    1 LILVCGLPGSGKSTLARALAERLGAVRLRSDVVRKRlFGAGLAPLERS--PEATARTYARLLALARELlAAGRSVILDAT 78

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490994164  90 FGFQP-RDTLQQLLQHAGVEkVLEVWNHISPELAVSRYASRLQDRKPGHPGEEylpELAQLAQQAEPM 156
Cdd:COG0645   79 FLRRAqREAFRALAEEAGAP-FVLIWLDAPEEVLRERLEARNAEGGDSDATWE---VLERQLAFEEPL 142
AAA_18 pfam13238
AAA domain;
13-36 1.22e-03

AAA domain;


Pssm-ID: 433052 [Multi-domain]  Cd Length: 128  Bit Score: 37.41  E-value: 1.22e-03
                          10        20
                  ....*....|....*....|....
gi 490994164   13 ILINGIPASGKSTVTRQLSAAFNL 36
Cdd:pfam13238   1 ILITGTPGVGKTTLAKELSKRLGF 24
CMPK cd02020
Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine ...
 12-37 3.32e-03

Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.


Pssm-ID: 238978 [Multi-domain]  Cd Length: 147  Bit Score: 36.31  E-value: 3.32e-03
                         10        20
                 ....*....|....*....|....*.
gi 490994164  12 VILINGIPASGKSTVTRQLSAAFNLP 37
Cdd:cd02020    1 IIAIDGPAGSGKSTVAKLLAKKLGLP 26
 
Name Accession Description Interval E-value
COG0645 COG0645
Predicted kinase, contains AAA domain [General function prediction only];
12-156 4.14e-10

Predicted kinase, contains AAA domain [General function prediction only];


Pssm-ID: 440410 [Multi-domain]  Cd Length: 164  Bit Score: 55.69  E-value: 4.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490994164  12 VILINGIPASGKSTVTRQLSAAFNLPQLTIDGIKEP-FMACFTGIDRTfnRQLGCAAYEVIWSIVGQS-PAGCIWLIDAW 89
Cdd:COG0645    1 LILVCGLPGSGKSTLARALAERLGAVRLRSDVVRKRlFGAGLAPLERS--PEATARTYARLLALARELlAAGRSVILDAT 78

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490994164  90 FGFQP-RDTLQQLLQHAGVEkVLEVWNHISPELAVSRYASRLQDRKPGHPGEEylpELAQLAQQAEPM 156
Cdd:COG0645   79 FLRRAqREAFRALAEEAGAP-FVLIWLDAPEEVLRERLEARNAEGGDSDATWE---VLERQLAFEEPL 142
AAA_18 pfam13238
AAA domain;
13-36 1.22e-03

AAA domain;


Pssm-ID: 433052 [Multi-domain]  Cd Length: 128  Bit Score: 37.41  E-value: 1.22e-03
                          10        20
                  ....*....|....*....|....
gi 490994164   13 ILINGIPASGKSTVTRQLSAAFNL 36
Cdd:pfam13238   1 ILITGTPGVGKTTLAKELSKRLGF 24
CMPK cd02020
Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine ...
 12-37 3.32e-03

Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.


Pssm-ID: 238978 [Multi-domain]  Cd Length: 147  Bit Score: 36.31  E-value: 3.32e-03
                         10        20
                 ....*....|....*....|....*.
gi 490994164  12 VILINGIPASGKSTVTRQLSAAFNLP 37
Cdd:cd02020    1 IIAIDGPAGSGKSTVAKLLAKKLGLP 26
AAA_33 pfam13671
AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the ...
 12-155 3.65e-03

AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.


Pssm-ID: 463952 [Multi-domain]  Cd Length: 143  Bit Score: 36.13  E-value: 3.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490994164   12 VILINGIPASGKSTVTRQLSAAfnLP-----------QLTIDGiKEPFMACFTGIDRTFNRQLGCAAyeviwsIVGQSPA 80
Cdd:pfam13671   1 LILLVGLPGSGKSTLARRLLEE--LGavrlssdderkRLFGEG-RPSISYYTDATDRTYERLHELAR------IALRAGR 71

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490994164   81 GCIWliDAWFGFQP-RDTLQQLLQHAGVEKVLeVWNHISPELAVSRYASR-LQDRKPGHPGEEylpELAQLAQQAEP 155
Cdd:pfam13671  72 PVIL--DATNLRRDeRARLLALAREYGVPVRI-VVFEAPEEVLRERLAARaRAGGDPSDVPEE---VLDRQKARFEP 142
AroK COG0703
Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the ...
 12-37 8.51e-03

Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440467 [Multi-domain]  Cd Length: 165  Bit Score: 35.10  E-value: 8.51e-03
                         10        20
                 ....*....|....*....|....*.
gi 490994164  12 VILInGIPASGKSTVTRQLSAAFNLP 37
Cdd:COG0703    1 IVLI-GMMGAGKSTVGRLLAKRLGLP 25
Udk COG0572
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway ...
 11-34 9.27e-03

Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440337 [Multi-domain]  Cd Length: 206  Bit Score: 35.59  E-value: 9.27e-03
                         10        20
                 ....*....|....*....|....
gi 490994164  11 TVILINGIPASGKSTVTRQLSAAF 34
Cdd:COG0572    8 RIIGIAGPSGSGKTTFARRLAEQL 31
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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