|
Name |
Accession |
Description |
Interval |
E-value |
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
27-588 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 862.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 27 SQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPF 106
Cdd:TIGR01816 2 AKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMPF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 107 SRLENGTIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNaDGAVVGCTALCI 185
Cdd:TIGR01816 82 SRTEDGKIYQRPFGGHTRDFGkGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLME-DGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 186 ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLL 265
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 266 NKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKE 345
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGV-GPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKD 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 346 PIPVIPTCHYMMGGIPTKVTGQALTvNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQESIAE 425
Cdd:TIGR01816 320 PIPVLPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKP 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 426 QGDLLDATEAEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDTSSE 505
Cdd:TIGR01816 399 GSDVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKV 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 506 FNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPE----SESMTRRSVNMEPKLRPAF 581
Cdd:TIGR01816 479 WNTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSYVDintgKVLLSYKPVIFKPLTVADF 558
|
....*..
gi 490997943 582 PPKIRTY 588
Cdd:TIGR01816 559 EPKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
24-588 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 794.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGN-THEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHM 102
Cdd:TIGR01812 16 VEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNvDPDDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHW 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 103 GLPFSRLENGTIYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKNHTTIFSEWYALDLVKNaDGAVVG 179
Cdd:TIGR01812 96 GVPFSRTPDGRIAQRPFGGHSKDrtcYAADKT----------GHALLHTLYEQCLKLGVSFFNEYFALDLIHD-DGRVRG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 180 CTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRG 259
Cdd:TIGR01812 165 VVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 260 EGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAH 339
Cdd:TIGR01812 245 EGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGSPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAG 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 340 VDPVKEPIPVIPTCHYMMGGIPTKVTGQALTvneqgeDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHL 419
Cdd:TIGR01812 325 VDPVKEPIPVRPTAHYSMGGIPTDYTGRVIC------ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 420 QESIAEQG----DLLDATEAEIDASLERLNRWNGnrnGEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLK 495
Cdd:TIGR01812 399 AEYAAKTGnpaaDIEEEAVKAEEALIDLLVESNG---GERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYK 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 496 NARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTR---RSVN 572
Cdd:TIGR01812 476 NVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYYDNPGTPRleyKPVT 555
|
570
....*....|....*.
gi 490997943 573 MEPklrpaFPPKIRTY 588
Cdd:TIGR01812 556 ITK-----YEPAERKY 566
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
7-588 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 753.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86
Cdd:PTZ00139 29 TYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAIQ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 87 YMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165
Cdd:PTZ00139 109 YMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGkGGQAYRCAAAADRTGHAMLHTLYGQSLKYDCNFFIEYF 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 166 ALDLVKNADGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG 245
Cdd:PTZ00139 189 ALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDLEFVQFHPTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 246 IAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDHLGKEVLES 325
Cdd:PTZ00139 269 IYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGC-GPNKDHIYLDLTHLPPETLHE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 326 RLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSL 405
Cdd:PTZ00139 348 RLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVPGLLAAGEAACASVHGANRLGANSL 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 406 LDLVVFGRAVGLHLQESIAEQGDLLDATEAEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKGLE 485
Cdd:PTZ00139 428 LDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQRTMQKHAAVFRIGESLQEGVE 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 486 QLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL-YLPESE 564
Cdd:PTZ00139 508 KIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNWMKHTLsYIRDVK 587
|
570 580 590
....*....|....*....|....*....|
gi 490997943 565 ----SMTRRSVNMEP--KLRPAFPPKIRTY 588
Cdd:PTZ00139 588 kgkvRLTYRPVITTPldNEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
7-588 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 681.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86
Cdd:PLN00128 50 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQ 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 87 YMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165
Cdd:PLN00128 130 YMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGkGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYF 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 166 ALDLVKNADGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG 245
Cdd:PLN00128 210 ALDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 246 IAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDHLGKEVLES 325
Cdd:PLN00128 290 IYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGV-GPEKDHIYLHLNHLPPEVLKE 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 326 RLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSL 405
Cdd:PLN00128 369 RLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSL 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 406 LDLVVFGRAVGLHLQEsIAEQGDLL-----DATEAEIdASLERLNrwngNRNGEDPV-EIRKALQECMQHNFSVFREGDA 479
Cdd:PLN00128 449 LDIVVFGRACANRVAE-IAKPGEKQkplpkDAGEKTI-AWLDKLR----NANGSLPTsKIRLNMQRVMQNNAAVFRTQET 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 480 MAKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL- 558
Cdd:PLN00128 523 LEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLg 602
|
570 580 590
....*....|....*....|....*....|...
gi 490997943 559 YLPESE-SMTRRSVNMEP--KLRPAFPPKIRTY 588
Cdd:PLN00128 603 YWEEGKvRLDYRPVHMNTldDEVETFPPKARVY 635
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
34-559 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 592.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 34 ALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGT 113
Cdd:PRK06069 35 AVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWSRRPDGR 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 114 IYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKNHTT-IFSEWYALDLVKNaDGAVVGCTALCIETGE 189
Cdd:PRK06069 115 ISQRPFGGMSFPrttFAADKT----------GFYIMHTLYSRALRFDNIhFYDEHFVTSLIVE-NGVFKGVTAIDLKRGE 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 190 VVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHG 269
Cdd:PRK06069 184 FKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKEG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 270 ERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWG-PHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIP 348
Cdd:PRK06069 264 ERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlCYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVTEPIP 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 349 VIPTCHYMMGGIPTKVTGQALTVNEQGedvvIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQESIAEQGD 428
Cdd:PRK06069 344 VRPAAHYTMGGIHTDVYGRVLTADGEW----VRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRIAGEQAAEYALKRPA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 429 L-LDATEAEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDTSSEFN 507
Cdd:PRK06069 420 PsSPVEKLAEKEEKRIFDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIYN 499
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 490997943 508 TQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLY 559
Cdd:PRK06069 500 TDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLA 551
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
34-588 |
1.21e-180 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 522.37 E-value: 1.21e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 34 ALLSKVFPTRSHTVSAQGGITVALGNTH-EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENG 112
Cdd:PRK05945 32 AVVAKTHPIRSHSVAAQGGIAASLKNVDpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRLPDG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 113 TIYQRPFGGQSKNfggeqaaRTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKnADGAVVGCTALCIETGEVVY 192
Cdd:PRK05945 112 RIAQRAFGGHSHN-------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLIL-EDNQAKGVVMYHIADGRLEV 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 193 FKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERF 272
Cdd:PRK05945 184 VRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGDRF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 273 MERYAPNAKDLAGRDVVARSIMIEIREGRGC--DG-PWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPV 349
Cdd:PRK05945 264 MADYAPSRMELAPRDITSRAITLEIRAGRGInpDGsAGGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEPMPV 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 350 IPTCHYMMGGIPTKVTGQALtvneQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQESIA----- 424
Cdd:PRK05945 344 RPTVHYCMGGIPVNTDGRVR----RSADGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEYVQgrklp 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 425 --EQGDLLDATEAEIDASLERLNRWNGNrngedpvEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDT 502
Cdd:PRK05945 420 evDEQRYLKEAKQRIQALLDQSGTYRIN-------QLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDK 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 503 SSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL--YLPESESMTRRSVNMEpklrpA 580
Cdd:PRK05945 493 GKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHTLayYSPAGIDIQYMPVVIT-----M 567
|
....*...
gi 490997943 581 FPPKIRTY 588
Cdd:PRK05945 568 FEPQERKY 575
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
34-568 |
2.25e-172 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 501.47 E-value: 2.25e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 34 ALLSKVFPTRSHTVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGT 113
Cdd:PRK09231 33 ALISKVYPMRSHTVAAEGGSAAVAQD--HDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPDGS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 114 IYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKnHTTI--FSEWYALDLVKNaDGAVVGCTALCIETG 188
Cdd:PRK09231 111 VNVRRFGGMKIErtwFAADKT----------GFHMLHTLFQTSLK-YPQIqrFDEHFVLDILVD-DGHVRGLVAMNMMEG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 189 EVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKH 268
Cdd:PRK09231 179 TLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKD 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 269 GERFMERYA---------PNAK--DLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTF 337
Cdd:PRK09231 259 GYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAY 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 338 AHVDPVKEPIPVIPTCHYMMGGIPTkvtgqaltvNEQGEdVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVG- 416
Cdd:PRK09231 339 VGVDPVKEPIPVRPTAHYTMGGIET---------DQNCE-TRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGe 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 417 ---LHLQESIAEQGDLLDATEAEIDASLERLNRWNGNrngEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRER 493
Cdd:PRK09231 409 qaaERAATAGPGNEAALDAQAADVEQRLKALVNQEGG---ENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKER 485
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490997943 494 LKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFD--FPDRDDENWLCHSLYLPESESMTR 568
Cdd:PRK09231 486 FKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDDVNFLKHTLAFYNADGTPR 562
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
7-588 |
3.61e-161 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 472.06 E-value: 3.61e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVAL-GNTH-EDNWEWHMYDTVKGSDYIGDQDA 84
Cdd:PRK06452 5 EYDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 85 IEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQS---KNFGGEQAartaaaadrtGHALLHTLYQQNLKNHTTIF 161
Cdd:PRK06452 85 AELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTyprTRFVGDKT----------GMALLHTLFERTSGLNVDFY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 162 SEWYALDLVKNaDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQF 241
Cdd:PRK06452 155 NEWFSLDLVTD-NKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 242 HPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWgphAKLKLDHLGKE 321
Cdd:PRK06452 234 HPTALYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGFPGGY---VGLDLTHLGEE 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 322 VLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQaltvneqgeDVVIPGLFAVGEIACVSVHGANRLG 401
Cdd:PRK06452 311 YIKERLALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVDIDGR---------NPDIVGLFSAGEAACVSVHGANRLG 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 402 GNSLLDLVVFGRAVGLHLQESIAEQGDLLDAT-EAEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAM 480
Cdd:PRK06452 382 SNSLLDTLVFGQVTGRTVVQFLKSNPGNPTSNyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGL 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 481 AKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL-Y 559
Cdd:PRK06452 462 LNAMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIaY 541
|
570 580 590
....*....|....*....|....*....|
gi 490997943 560 LP-ESESMTRRSVNMEpklrpAFPPKIRTY 588
Cdd:PRK06452 542 LRgNTVEVTFKPVKIT-----RWKPEPRVY 566
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
24-558 |
6.92e-157 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 459.57 E-value: 6.92e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 24 LQISQSGQTcALLSKVFPTRSHTVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMG 103
Cdd:COG0029 21 LKLAERGRV-TLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 104 LPFSRLENGTIYQRPFGGQSKN----FGGeqaartaaaadRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNADGAVV 178
Cdd:COG0029 98 VPFDRDEDGELALTREGGHSRRrilhAGD-----------ATGREIERALLEAVRAHpNITVLENHFAVDLITDADGRCV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 179 GCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV---LVTE 255
Cdd:COG0029 167 GAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 256 GCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREGrGCDGPWgphaklkLD--HLGKEVLESRLPGILEL 333
Cdd:COG0029 247 AVRGEGAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKT-GGDCVY-------LDisHLDAEFIRERFPTIYAR 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 334 SRTFaHVDPVKEPIPVIPTCHYMMGGIptkvtgqalTVNEQGE-DvvIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFG 412
Cdd:COG0029 318 CLEL-GIDITKEPIPVAPAAHYTMGGV---------ATDLDGRtS--IPGLYAVGEVACTGVHGANRLASNSLLEGLVFG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 413 RAVGLHLQESIAEQGDLLDATEAEIDASlerlnrwnGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRE 492
Cdd:COG0029 386 RRAAEDIAARLAESPLPPEIPEWDESVT--------DPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLRE 457
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490997943 493 RLKNARLDDTSsefntqrVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDEnWLCHSL 558
Cdd:COG0029 458 EIEEYANFRVS-------RDLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPA-WRRHTV 515
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
28-588 |
1.81e-146 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 437.87 E-value: 1.81e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 28 QSGQTCALLSKVFPTRSHTVSAQGGITVALGNT---HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGL 104
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAvkgEGDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 105 PFSRLENG-----------TIYQRPFGG---QSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLV 170
Cdd:PRK08626 106 PWTRVTAGprtvvingekvTITEKEEAHgliNARDFGGTKKWRTCYTADGTGHTMLYAVDNEAIKLGVPVHDRKEAIALI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 171 KNaDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGV-PVQDMEMWQFHPTGIAGA 249
Cdd:PRK08626 186 HD-GKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFHPTAIVPS 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 250 GVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPG 329
Cdd:PRK08626 265 GILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVKSPYGPHLWLDIRILGRKHIETNLRE 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 330 ILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNeqgedvvipGLFAVGEIACVSVHGANRLGGNSLLDLV 409
Cdd:PRK08626 345 VQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYGLK---------GLFSAGEAACWDMHGFNRLGGNSLAETV 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 410 VFGRAVG-----------LHLQESIAEqgDLLDATEAEIDASLERlnrwNGnrnGEDPVEIRKALQECMQHNFSVFREGD 478
Cdd:PRK08626 416 VAGMIVGkyvadfclgneLEIDTALVE--KFVKKQQDRIDELIAG----EG---KENVFEIKNEMQEIMMEKVGIFRNGP 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 479 AMAKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSL 558
Cdd:PRK08626 487 ELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRNDRDWLNRTL 566
|
570 580 590
....*....|....*....|....*....|...
gi 490997943 559 -YLPESESMtRRSVNMEP--KLRPAFPPKIRTY 588
Cdd:PRK08626 567 aSWPEGEAL-EPTLEYEPldVMKMELPPGFRGY 598
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
24-425 |
3.24e-135 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 401.13 E-value: 3.24e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVAlGNTH-----EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILE 98
Cdd:COG1053 20 LEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAA-GTNVqkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDW 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 99 LDHMGLPFSRLENGTIYQrpfggqsknFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNaDGAVV 178
Cdd:COG1053 99 LEAQGVPFSRTPDGRLPQ---------FGGHSVGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVD-DGRVV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 179 GCTALCiETGEVVYFKARATVLATGGAGRIYQS------------TTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGI 246
Cdd:COG1053 169 GVVARD-RTGEIVRIRAKAVVLATGGFGRNYEMraeylpeaegalSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 247 AGAGVLVTEGCRG-EGGYLLNKHGERFMERYAPnakdlagRDVVARSIMIEIREGRG--CD--GPWGPHAKLKLDHLGK- 320
Cdd:COG1053 248 PGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPAYlvLDlrHRRRLEEYLEAGYLVKa 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 321 EVLEsRLPGIL-----ELSRTF--------AHVD-------PVKE----PIPVIPTCHYMMGGIPTKVTGQALTVNEQge 376
Cdd:COG1053 321 DTIE-ELAAKLgidaaELAATVarynaaakAGVDprgtclgPIKEgpfyAIPVRPGVHYTMGGLRVDADARVLDADGT-- 397
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 490997943 377 dvVIPGLFAVGEiACVSVHGANRLGGNSLLDLVVFGRAVGLHLQESIAE 425
Cdd:COG1053 398 --PIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHAAEYAKA 443
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
30-551 |
5.98e-135 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 404.36 E-value: 5.98e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 30 GQTCALLSKVFPTRSH-TVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSR 108
Cdd:PRK06263 29 GKNVVIVSKGLFGKSGcTVMAEGGYNAVLNP--EDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDR 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 109 LENGTIYQRPFGGQSKN---FGGEQAartaaaadrtGHALLHTLYQQNLKNHTTIFSEWYALDLVKNADGAVVGCTALCI 185
Cdd:PRK06263 107 TEDGEIAQRPFGGQSFNrtcYAGDRT----------GHEMMMGLMEYLIKERIKILEEVMAIKLIVDENREVIGAIFLDL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 186 ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGI----AGAGVLVTEGCRGEG 261
Cdd:PRK06263 177 RNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEG 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 262 GYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDgpwgpHAKLKLD--HLGKEVLESRLPGILELSRTFAh 339
Cdd:PRK06263 257 GILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGTN-----HGGVYLDvtHLPDEVIEEKLETMLEQFLDVG- 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 340 VDPVKEPIPVIPTCHYMMGGIPtkvtgqaltVNEQGEdVVIPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAVGLHL 419
Cdd:PRK06263 331 VDIRKEPMEVAPTAHHFMGGIR---------INEDCE-TNIPGLFACGEVAG-GVHGANRLGGNALADTQVFGAIAGKSA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 420 QE--SIAEQGDLLDATEAEIDASLERLNRWNGNRNgedPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNA 497
Cdd:PRK06263 400 AKnaENNEFKKVNRSVEEDIARIKSEIKFLNGSIN---PYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDL 476
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 490997943 498 RLDDTsSEFNtqrvECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE 551
Cdd:PRK06263 477 KVNGI-VDFN----KALELENMILVAELVIKSALLRKESRGAHYREDYPETNDE 525
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
24-405 |
1.87e-118 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 356.60 E-value: 1.87e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTH--EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDH 101
Cdd:pfam00890 16 LAAAEAGLKVAVVEKGQPFGGATAWSSGGIDALGNPPQggIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 102 MGLPFSRLENGTIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNaDGAVVGCT 181
Cdd:pfam00890 96 LGVPFSRTEDGHLDLRPLGGLSATWRTPHDAADRRRGLGTGHALLARLLEGLRKAGVDFQPRTAADDLIVE-DGRVTGAV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 182 ALCIETGEVVYFKAR-ATVLATGGAGR---------IYQSTTNAHINTGDGVGMAIRAGVPVQD--MEMWQFHPTGIAG- 248
Cdd:pfam00890 175 VENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSLVGi 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 249 ---AGVLVtEGCRGEGGYLLNKHGERFMeryapnaKDLAGRDVVARSIM-IEIREGRgcdgpwGPHAKLKLDH-LGKEVL 323
Cdd:pfam00890 255 rlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGR------GANVYLDASGsLDAEGL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 324 ESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEQgedvVIPGLFAVGEIACVSVHGANRLGGN 403
Cdd:pfam00890 321 EATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLDADGQ----PIPGLYAAGEVACGGVHGANRLGGN 396
|
..
gi 490997943 404 SL 405
Cdd:pfam00890 397 SL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
5-583 |
3.21e-118 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 363.97 E-value: 3.21e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTH-EDNWEWHMYDTVKGSDYIGDQD 83
Cdd:PRK07803 6 RHSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVNpKDNWQVHFRDTMRGGKFLNNWR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 84 AIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRpfggqskNFGGEQAARTAAAADRTGHALLHTLYQ------QNLKNH 157
Cdd:PRK07803 86 MAELHAKEAPDRVWELETYGALFDRTKDGRISQR-------NFGGHTYPRLAHVGDRTGLELIRTLQQkivslqQEDHAE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 158 T-------TIFSEWYALDLVKNaDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAG 230
Cdd:PRK07803 159 LgdyeariKVFAECTITELLKD-GGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 231 VPVQDMEMWQFHPTGI----AGAGVLVTEGCRGEGGYLLNKHGERFMERYAP----------------------NAK--- 281
Cdd:PRK07803 238 ATLINMEFVQFHPTGMvwppSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqyaeteeeadrwykdndNNRrpp 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 282 DLAGRDVVARSIMIEIREGRGcdgpwGPHAKLKLD---HLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMG 358
Cdd:PRK07803 318 ELLPRDEVARAINSEVKAGRG-----SPHGGVYLDiasRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMG 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 359 GIPTKVTGQALTVneqgedvviPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAVGLHLQESIAEQGDLLDATEAEID 438
Cdd:PRK07803 393 GVEVDPDTGAATV---------PGLFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEEAVD 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 439 ASLER-LNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDTsSEFNTQRVECLELD 517
Cdd:PRK07803 463 AAAREaLAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVEGH-RQYNPGWHLALDLR 541
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 518 NLMETAYATAVSANFRTESRGAHSRFDFPDRDDE----NWLChslylpeSESMTRRSVNMEPKLRPAFPP 583
Cdd:PRK07803 542 NMLLVSECVARAALERTESRGGHTRDDHPGMDPEwrriNLVC-------RADPVGGHVTVTRQPQPPMRP 604
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
4-550 |
3.35e-106 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 331.68 E-value: 3.35e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 4 PVREFDAVVIGAGGAGMRAALQISQSGqTCALLSKVFPTRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQD 83
Cdd:PLN02815 26 STKYFDFLVIGSGIAGLRYALEVAEYG-TVAIITKDEPHESNTNYAQGGVSAVL--DPSDSVESHMRDTIVAGAFLCDEE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 84 AIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKN--------FGGEqaartaaaadrTGHALLhtlyqQNLK 155
Cdd:PLN02815 103 TVRVVCTEGPERVKELIAMGASFDHGEDGNLHLAREGGHSHHrivhaadmTGRE-----------IERALL-----EAVK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 156 NH--TTIFSEWYALDLVKNADGAVVGC---TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAG 230
Cdd:PLN02815 167 NDpnITFFEHHFAIDLLTSQDGGSIVChgaDVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQ 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 231 VPVQDMEMWQFHPTGIAGAGV------------LVTEGCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIR 298
Cdd:PLN02815 247 AVVSNMEFVQFHPTALADEGLpikpakarenafLITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLK 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 299 EGRgcdgpwGPHAKLKLDHLGKEVLESRLPGI----LELSrtfahVDPVKEPIPVIPTCHYMMGGIPTkvtgqaltvNEQ 374
Cdd:PLN02815 326 KRN------EKYVLLDISHKPREEILSHFPNIaaecLKRG-----LDITKQPIPVVPAAHYMCGGVRT---------GLQ 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 375 GEDVViPGLFAVGEIACVSVHGANRLGGNSLLDLVVFG-RAVglhlQESIAE-QGDLLDATEAEidASLERLNRWNGNRN 452
Cdd:PLN02815 386 GETNV-QGLYAAGEVACTGLHGANRLASNSLLEALVFArRAV----QPSIDHmARALRDVSAAA--AWARPVAPTALADS 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 453 GEDPV-----EIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKnARLDDTSSEFNTQRVECLELDNLMETAYATA 527
Cdd:PLN02815 459 VMDEIlewtaVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWE-AILFRHGWKPTMVGLEACEMRNLFCVAKLVV 537
|
570 580
....*....|....*....|...
gi 490997943 528 VSANFRTESRGAHSRFDFPDRDD 550
Cdd:PLN02815 538 SSALARKESRGLHYTTDYPELVE 560
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
24-554 |
7.60e-98 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 309.98 E-value: 7.60e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEW-HMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHM 102
Cdd:PRK08641 20 IKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRM 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 103 GLPFSRLENGTIYQRPFGGQSKN---FGGeqaartaaaaDRTGHALLHTLYQQ----NLKNHTTIFSEWYALDLVKNADG 175
Cdd:PRK08641 100 GVMFNRTPEGLLDFRRFGGTLHHrtaFAG----------ATTGQQLLYALDEQvrryEVAGLVTKYEGWEFLGAVLDDEG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 176 AVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV--LV 253
Cdd:PRK08641 170 VCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLM 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 254 TEGCRGEGGYL-LNKHGER--FMERYAPNAKDLAGRDVVARSI-MIEIREGRGCDGPwgPHAKLKLDHLGKEVLESRLPG 329
Cdd:PRK08641 250 SESARGEGGRVwTYKDGKPwyFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGINGE--NMVYLDLSHKDPKELDIKLGG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 330 ILELSRTFAHVDPVKEPIPVIPTCHYMMGGiptkvtgqaLTVN-EQGEDvvIPGLFAVGEiaC-VSVHGANRLGGNSLLD 407
Cdd:PRK08641 328 ILEIYEKFTGDDPRKVPMKIFPAVHYSMGG---------LWVDyDQMTN--IPGLFAAGE--CdYSYHGANRLGANSLLS 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 408 LVVFGRAVGLHLQESIAEQGDLLDAT-----EAEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAK 482
Cdd:PRK08641 395 AIYGGMVAGPNAVEYIKGLGKSADDVsssvfEQALKQEQEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLE 474
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490997943 483 GLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWL 554
Cdd:PRK08641 475 TDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDENWL 546
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
7-546 |
9.00e-96 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 301.33 E-value: 9.00e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 7 EFDAVVIGAGGAGMRAALQISQSGQTcALLSKVFPTRSHTVSAQGGITVALGNTheDNWEWHMYDTVKGSDYIGDQDAIE 86
Cdd:TIGR00551 2 EMDVVVIGSGAAGLSAALALAEKGRV-SVITKASVTDSNSYYAQGGIAAALAET--DSIDAHVEDTLAAGAGICDEEAVW 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 87 YMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKNfggeqaaRTAAAADRTGHALLHTLYQQ-NLKNHTTIFSEWY 165
Cdd:TIGR00551 79 FVVSDGSEAVQFLVSHGVTFDRNEQGGVALTREGGHSYP-------RIFHAGDATGREIIPTLEKHaRSEPNVNIIEGEF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 166 ALDLVKNaDGAVVGCTALCIETGEVvyFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG 245
Cdd:TIGR00551 152 ALDLLIE-TGRCAGVFVQGSGTLET--LHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 246 IAGAGV---LVTEGCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREGRGcdgpwgphAKLKLDHLGKEV 322
Cdd:TIGR00551 229 LIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEGGG--------DCVFLDASGIEN 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 323 LESRLPGILELSRTfAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvneqgedvVIPGLFAVGEIACVSVHGANRLGG 402
Cdd:TIGR00551 300 FKDRFPTIYAVCRG-AGIDPEREPIPVAPGAHYTMGGISVDAFGRT----------TIPGLYAIGETACTGLHGANRLAS 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 403 NSLLDLVVFGRAVGLHL-QESIAEQGDLLDATEAEI--DASLER--LNRWngnrngedpveiRKALQECMQHNFSVFREG 477
Cdd:TIGR00551 369 NSLLECLVFGLRAARTIsREPPYASREYQSGVWDEPrsENPLDRheLQHK------------MSSLRSVLWNHAGIVRLE 436
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490997943 478 DAMAKGLEQLKAIRErlknarlddtssefntQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFP 546
Cdd:TIGR00551 437 WSLREALRKLVEIQD----------------EVDERMELSNLKLVAKLVTISALKREESRGAHYRLDYP 489
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
34-558 |
1.27e-94 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 300.42 E-value: 1.27e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 34 ALLSKVFPTRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSR----- 108
Cdd:PRK07395 35 GLITKDTLKTSASDWAQGGIAAAI--APDDSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRhgqhl 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 109 ---LENGtiYQRPfggqsknfggeqaaRTAAAADRTGHALLHTLYQQNL-KNHTTIFSEWYALDLvkNADGAVVGCTALC 184
Cdd:PRK07395 113 altLEAA--HSRP--------------RVLHAADTTGRAIVTTLTEQVLqRPNIEIISQALALSL--WLEPETGRCQGIS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 185 I-ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV---LVTEGCRGE 260
Cdd:PRK07395 175 LlYQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 261 GGYLLNKHGERFMERYAPnAKDLAGRDVVARSIMIEIREgRGCDgPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAhV 340
Cdd:PRK07395 255 GAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATD-PATAHVWLDLRPIPAERIRRRFPNIIRVCQKWG-I 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 341 DPVKEPIPVIPTCHYMMGGIPTKVTGQaltvneqgedVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGlHLQ 420
Cdd:PRK07395 331 DVFQEPIPVAPAAHYWMGGVVTDLNNQ----------TSIPGLYAVGETASTGVHGANRLASNSLLECLVFAAQLA-QLE 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 421 ESIAEqgdLLDATEAEIDASLERLNrWNgnrNGEDPVE-IRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARL 499
Cdd:PRK07395 400 LPIEP---PASPDLPPISFIIDASQ-WK---NEQEQIQrIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPL 472
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490997943 500 D--------DTSSEFNTQRVE-----CLELDNLMETAYATAVSANFRTESRGAHSRFDFPDrDDENWLCHSL 558
Cdd:PRK07395 473 SqflanlppGQTVSFNGPDAEqqlrlWAETRNLLDIAYLILKSALFRTESRGGHYRLDYPQ-TDPAWQVHTL 543
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
9-556 |
6.91e-91 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 290.33 E-value: 6.91e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYM 88
Cdd:PRK07804 18 DVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 89 CKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKN----FGGEQAARTAAaadrtgHALLHTLYQQNLknhTTIFSEw 164
Cdd:PRK07804 96 VAEGPRAVRELVALGARFDESPDGRWALTREGGHSRRrivhAGGDATGAEVQ------RALDAAVRADPL---DIREHA- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 165 YALDLVKNADGAVVGCTALCIETGE-----VVYfkARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMW 239
Cdd:PRK07804 166 LALDLLTDGTGAVAGVTLHVLGEGSpdgvgAVH--APAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 240 QFHPTG-IAGAGV-----LVTEGCRGEGGYLLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREgRGCDGPWgphakl 313
Cdd:PRK07804 244 QFHPTVlFLGPAAggqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TGDDHVY------ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 314 kLDHLGKEVLESRLPGILELSRTfAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAltvneqgedvVIPGLFAVGEIACVS 393
Cdd:PRK07804 316 -LDARGIEGFARRFPTITASCRA-AGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT----------SVPGLYAAGEVACTG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 394 VHGANRLGGNSLLDLVVFGRAVGLHLQESIAEQGdlldatEAEIDASLERlnrwngnRNGEDPVEIRKALQECMQHNFSV 473
Cdd:PRK07804 384 VHGANRLASNSLLEGLVVGERAGAAAAAHAAAAG------RPRATPAVGP-------EPGLLPALDRAELQRAMTRGAGV 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 474 FREGDAMAKGLEQLKAIRERLKNARLDDtssefntqrvecLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDEnW 553
Cdd:PRK07804 451 LRSAAGLARAADRLAAGAPARVVPGRAD------------WEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDE-W 517
|
...
gi 490997943 554 LCH 556
Cdd:PRK07804 518 ARS 520
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
41-588 |
1.20e-88 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 286.36 E-value: 1.20e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 41 PTRSHTVSAQGGITVALGNTHEDNWEW-HMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRpf 119
Cdd:TIGR01811 33 PRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLMDAMGVPFAREYGGLLDTR-- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 120 ggqskNFGGEQAARTAAAADRTGHALLHTLYQQnLKNH-----TTIFSEWYALDLVKNADGAVVGCTALCIETGEVVYFK 194
Cdd:TIGR01811 111 -----SFGGVQVSRTAYARGQTGQQLLLALDSA-LRRQiaaglVEKYEGWEMLDIIVVDGNRARGIIARNLVTGEIETHS 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 195 ARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAG------VLVTEGCRGEG------- 261
Cdd:TIGR01811 185 ADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGtwqsklRLMSESLRNDGriwtpke 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 262 ---GYLLNK--HGER--FMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAKLKLDH----LGKEVLESRLPGI 330
Cdd:TIGR01811 265 kndNRDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGV-GPGENAVYLDFSDaderLGRKEIDAKYGNL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 331 LELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTkvtgqaltvnEQGEDVVIPGLFAVGEiACVSVHGANRLGGNSLLDLVV 410
Cdd:TIGR01811 344 FEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWV----------DYDQMTNIPGLFAAGE-CDFSQHGANRLGANSLLSAIA 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 411 FGRAVGLHLQE---SIAEQGDLLDATEAEIDASL----ERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKG 483
Cdd:TIGR01811 413 DGYFALPFTIPnylGPELSSEDMPEDAPEFQAALaeeqERFDRLLKMRGDENPYYLHRELGEIMTENCGVSRNNEKLLKT 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 484 LEQLKAIRERL-KNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFP------DRDDENWLCH 556
Cdd:TIGR01811 493 DEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEFPtpdgeaERNDEEFLKV 572
|
570 580 590
....*....|....*....|....*....|....*.
gi 490997943 557 SLYLPESES----MTRRSVNMEpklrpAFPPKIRTY 588
Cdd:TIGR01811 573 TAWEFQGENdapeFHYEELDFE-----LVPPRKRDY 603
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
42-553 |
1.16e-87 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 280.72 E-value: 1.16e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 42 TRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGG 121
Cdd:PRK08071 37 RNSNSHLAQGGIAAAV--ATYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGPLHLGKEGA 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 122 QSKN----FGGEQAartaaaadrtGHALLHTLYQQnLKNHTTIFSEWYALDLVKNaDGAVVGCTALcIETGEVVYFKARA 197
Cdd:PRK08071 115 HRKRrilhAGGDAT----------GKNLLEHLLQE-LVPHVTVVEQEMVIDLIIE-NGRCIGVLTK-DSEGKLKRYYADY 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 198 TVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGV---LVTEGCRGEGGYLLNKHGERFME 274
Cdd:PRK08071 182 VVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGRcvgLVSEAVRGEGAVLINEDGRRFMM 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 275 RYAPnAKDLAGRDVVARSIMIEIREGRgcdgpwgphaKLKLDHLGKEVLESRLPGILELSRTfAHVDPVKEPIPVIPTCH 354
Cdd:PRK08071 262 GIHP-LADLAPRDVVARAIHEELLSGE----------KVYLNISSIQNFEERFPTISALCEK-NGVDIETKRIPVVPGAH 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 355 YMMGGIptkvtgqalTVNEQGEdVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQESIAEQGDLldaTE 434
Cdd:PRK08071 330 FLMGGV---------KTNLDGE-TSIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATKPRLN---PF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 435 AEIDASLERLNrwngnrngedPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDTSsefntqrVECL 514
Cdd:PRK08071 397 AEKEKKFIVLN----------HLPTKEEIQEKMMKYVGIVRTEQSLSEAKRWLEKYGVRNMILDHDALT-------NEEI 459
|
490 500 510
....*....|....*....|....*....|....*....
gi 490997943 515 ELDNLMETAYATAVSANFRTESRGAHSRFDFPDRddeNW 553
Cdd:PRK08071 460 ELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR---NW 495
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
49-551 |
7.84e-82 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 265.62 E-value: 7.84e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 49 AQGGITVALGNthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKN--- 125
Cdd:PRK07512 50 AQGGIAAALGP--DDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRLALGLEAAHSRRriv 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 126 -FGGEQAartaaaadrtGHALLHTLYQQNLKN-HTTIFSEWYALDLVKnADGAVVGctALCIETGEVVYFKARATVLATG 203
Cdd:PRK07512 128 hVGGDGA----------GAAIMRALIAAVRATpSITVLEGAEARRLLV-DDGAVAG--VLAATAGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 204 GAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAG---VLVTEGCRGEGGYLLNKHGERFMERYAPNA 280
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDIGRdpaPLATEALRGEGAILINEDGERFMADIHPGA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 281 kDLAGRDVVARSIMIEIREGRGcdgpwgphakLKLD---HLGKEvLESRLPGILELSRTfAHVDPVKEPIPVIPTCHYMM 357
Cdd:PRK07512 275 -ELAPRDVVARAVFAEIAAGRG----------AFLDaraALGAH-FATRFPTVYAACRS-AGIDPARQPIPVAPAAHYHM 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 358 GGIPTKVTGQAltvneqgedvVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGlhlqESIAEQGD-----LLDA 432
Cdd:PRK07512 342 GGIAVDADGRS----------SLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAA----EDIAGTPAaaaapLSAA 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 433 TEAEIDASlerlnrwngnrngeDPVEIRKAlqecMQHNFSVFREGDAMAKGLEQLKAIRERLKNARlddtssefntqrve 512
Cdd:PRK07512 408 AAPALDPA--------------DLALLRPI----MSRHVGVLRDADGLRRAIAALLPLEAGAGPAA-------------- 455
|
490 500 510
....*....|....*....|....*....|....*....
gi 490997943 513 cleldNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE 551
Cdd:PRK07512 456 -----DPATVALLIAVAALAREESRGAHFRTDFPLTAPA 489
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
34-551 |
6.52e-76 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 250.99 E-value: 6.52e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 34 ALLSKVFPTRSHTVSAQGGITVALGNTheDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENgt 113
Cdd:PRK09077 34 AVLSKGPLSEGSTFYAQGGIAAVLDET--DSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQ-- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 114 iYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLyQQNLKNH--TTIFSEWYALDLV-----KNADGAVVGCTALCIE 186
Cdd:PRK09077 110 -ANGEEGYHLTREGGHSHRRILHAADATGKAVQTTL-VERARNHpnITVLERHNAIDLItsdklGLPGRRVVGAYVLNRN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 187 TGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGI---AGAGVLVTEGCRGEGGY 263
Cdd:PRK09077 188 KERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLyhpQARSFLITEALRGEGAY 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 264 LLNKHGERFMERYAPNAkDLAGRDVVARSIMIEIREgRGCDgpwgpHAKLKLDHLGKEVLESRLPGILELSRTFAhVDPV 343
Cdd:PRK09077 268 LKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGAD-----CVYLDISHKPADFIRQHFPTIYERCLELG-IDIT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 344 KEPIPVIPTCHYMMGGIPTKVTGQAltvneqgeDvvIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGlhlqESI 423
Cdd:PRK09077 340 KEPIPVVPAAHYTCGGVMVDLHGRT--------D--LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAA----EDI 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 424 AEQGDLLDATEAeidaslerLNRWNGNR--NGEDPVEIrkalqecmQHNFSVFREgdAM---------AKGLEQLKAiRE 492
Cdd:PRK09077 406 LSRLPKAPMPPT--------LPAWDESRvtDSDEEVVI--------QHNWHELRL--FMwdyvgivrtTKRLERALH-RI 466
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490997943 493 RLKNARLDDTSSEFntqRV--ECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE 551
Cdd:PRK09077 467 RLLQQEIDEYYANF---RVsnNLLELRNLVQVAELIVRCAMERKESRGLHYTLDYPELLPE 524
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
35-413 |
1.33e-70 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 233.81 E-value: 1.33e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 35 LLSKVFPTRSHTVSAQGGITVALGnthEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTI 114
Cdd:PRK06175 31 MVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDEKELS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 115 YQRPfGGQSKNfggeqaaRTAAAADRTGHALLHTLYQQNLK-NHTTIFSEWYALDLVKNaDGAVVGctALCIETGEVVYF 193
Cdd:PRK06175 108 YTKE-GAHSVN-------RIVHFKDNTGKKVEKILLKKVKKrKNITIIENCYLVDIIEN-DNTCIG--AICLKDNKQINI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 194 KARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPT-----GIAGAGVLVTEGCRGEGGYLLNKH 268
Cdd:PRK06175 177 YSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTafyeeTIEGKKFLISESVRGEGGKLLNSK 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 269 GERFMERYAPnakdlagRDVVARSIMIEIREGRgcdgpwGPHAKLKLDHLGKEVLESRLPGILE--LSRTfahVDPVKEP 346
Cdd:PRK06175 257 GERFVDELLP-------RDVVTKAILEEMKKTG------SNYVYLDITFLDKDFLKNRFPTIYEecLKRG---IDITKDA 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490997943 347 IPVIPTCHYMMGGIptKVTGQALTVNEQgedvvipgLFAVGEIACVSVHGANRLGGNSLLDLVVFGR 413
Cdd:PRK06175 321 IPVSPAQHYFMGGI--KVDLNSKTSMKN--------LYAFGEVSCTGVHGANRLASNSLLEGLVFSK 377
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
460-588 |
1.46e-56 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 186.49 E-value: 1.46e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 460 RKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGA 539
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 490997943 540 HSRFDFPDRDDENWLCHSLYLPESES----MTRRSVNMEPKlrpaFPPKIRTY 588
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDggprLEYEPVTFTTL----FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
41-546 |
7.18e-50 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 179.23 E-value: 7.18e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 41 PTRSHTVSAQGGITVALgnTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPF--SRLENGTIYQRP 118
Cdd:PRK08401 34 IKKSNSYLAQAGIAFPI--LEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLEFegNELEGGHSFPRV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 119 FGGQSKNfggeqaartaaaadrtGHALLHTLYQQnLKNHTTIFSEWYALDL-VKNADGAVVgctalcIETGEVVYFKAra 197
Cdd:PRK08401 112 FTIKNET----------------GKHIIKILYKH-ARELGVNFIRGFAEELaIKNGKAYGV------FLDGELLKFDA-- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 198 TVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGA-GV-LVTEGCRGEGGYLLNKHGERFMer 275
Cdd:PRK08401 167 TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKrGTyLISEAVRGAGAKLVTGDGERFV-- 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 276 yapnaKDLAGRDVVARSIMIEIREGRGcdgpwgphakLKLDHLGKEVLESRLPGILELSRTfAHVDPVKEPIPVIPTCHY 355
Cdd:PRK08401 245 -----NELETRDIVARAIYRKMQEGKG----------VFLDATGIEDFKRRFPQIYAFLRK-EGIDPSRDLIPVTPIAHY 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 356 MMGGIPTKV---TGqaltvneqgedvvIPGLFAVGEIACVSVHGANRLGGNSLLDLVVfgraVGLHLQESIA-EQGDLLD 431
Cdd:PRK08401 309 TIGGISVDTfyrTG-------------IKNLYAIGEAASNGFHGANRLASNSLLECIV----SGLEVARTISrERPKLRE 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 432 ATEAeidaslerlnRWNGNRNGEdpVEirkALQECMQHNFSVFREGDAMAKGLEQLKAIRErlknarlddtssefnTQRV 511
Cdd:PRK08401 372 VKEP----------PYHGYELGD--VD---SIREILWNHAGIVRSEESLREGLKKLEGIEA---------------DPRL 421
|
490 500 510
....*....|....*....|....*....|....*
gi 490997943 512 ECLeldnlmetAYATAVSANFRTESRGAHSRFDFP 546
Cdd:PRK08401 422 KLL--------AKGVLECALAREESRGAHYREDFP 448
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
38-556 |
7.43e-43 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 162.68 E-value: 7.43e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 38 KVF-----PTRSHTVSAQGGITVAlGNTHEDN---WEwHMYDTVKGSDYIGDQDAIEYMCKTGPEAIlelDHM---GLPF 106
Cdd:PRK07573 62 KVFcyqdsPRRAHSIAAQGGINAA-KNYQNDGdsvYR-LFYDTVKGGDFRAREANVYRLAEVSVNII---DQCvaqGVPF 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 107 SRLENGTIYQRPFGG-Q-SKNF---G--GEQaartaaaadrtghaLLHTLYQ----QNLKNHTTIFSEWYALDLVKnADG 175
Cdd:PRK07573 137 AREYGGLLANRSFGGaQvSRTFyarGqtGQQ--------------LLLGAYQalsrQIAAGTVKMYTRTEMLDLVV-VDG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 176 AVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAhinTGDGVGMAIRA---GVPVQDMEMWQFHPTGIAGAG-- 250
Cdd:PRK07573 202 RARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNA---MGSNATAIWRAhkkGAYFANPCFTQIHPTCIPVSGdy 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 251 ----VLVTEGCRGEGGYLLNKH------------GER--FMERYAPNAKDLAGRDVVARSIMIEIREGRGCdGPWGPHAK 312
Cdd:PRK07573 279 qsklTLMSESLRNDGRIWVPKKkgdkrkpndipeEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGV-GPTGLGVY 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 313 LKL----DHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGiptkvtgqaLTV--NEQGEdvvIPGLFAV 386
Cdd:PRK07573 358 LDFadaiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGG---------LWVdyNLMST---IPGLFVI 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 387 GEiACVSVHGANRLGGNSLLD-LV----VFGRAVGLHL-----QESIAEQGDLLDATEAEIDASLERLNRWNGNRNgedP 456
Cdd:PRK07573 426 GE-ANFSDHGANRLGASALMQgLAdgyfVLPYTIGNYLadtigTPKVSTDHPEFKEAEAEVQDRIDRLLNIKGKRT---V 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 457 VEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERL-KNARLDDTSSEFNTQ-----RV-ECLELDNLMetayatAVS 529
Cdd:PRK07573 502 DSFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQElekagRVaDFLELGELM------CRD 575
|
570 580 590
....*....|....*....|....*....|...
gi 490997943 530 ANFRTESRGAHSRFDF--PD----RDDENWlCH 556
Cdd:PRK07573 576 ALHREESCGGHFREEHqtEDgealRDDENF-AY 607
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
62-416 |
3.84e-36 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 140.55 E-value: 3.84e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 62 EDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAI-LELDHMGLPFSRLENgtiyqrpFGGQSKNfggeqAARTAAAADR 140
Cdd:TIGR01813 60 EDSPELFIKDTLKGGRGINDPELVRILAEESKDAVdWLQDGVGARLDDLIQ-------LGGHSVP-----RAHRPTGGAA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 141 TGHALLHTLYQQNLKNHTTIFSEWYALDLVKNADGAVVGCTALcIETGEVVYFKARATVLATGGAGRIYQ---------- 210
Cdd:TIGR01813 128 SGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVK-GKGKGIYIKAAKAVVLATGGFGSNKEmiakydptlk 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 211 --STTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTG-IAGAGVLVTEGCRGEGGYLLNKHGERFMEryapnakDLAGRD 287
Cdd:TIGR01813 207 hlGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTGERFMN-------ELATRD 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 288 VVARSIMieIREGRG----CDGPWGPHAKLKLDHLGKEVLEsRLPGILELS----------------------------- 334
Cdd:TIGR01813 280 KVSDAIL--AQPGKDayliFDDDVYKKAKMVDNYYRLGVAY-KGDSLEELAkqfgipaaalkqtikdyngyvasgkdtpf 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 335 --RTFAHVDPVKEPIPVI---PTCHYMMGGIptKVTGQALTVNEQGEdvVIPGLFAVGEiacVS--VHGANRLGGNSLLD 407
Cdd:TIGR01813 357 grPMDMPTDLSKAPYYAIkvtPGVHHTMGGV--KINTKAEVLDANGK--PIPGLFAAGE---VTggVHGANRLGGNAIAD 429
|
....*....
gi 490997943 408 LVVFGRAVG 416
Cdd:TIGR01813 430 CIVFGRIAG 438
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
76-575 |
5.18e-36 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 142.11 E-value: 5.18e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 76 SDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRpfggQSKNFGgeqaarTAAAADRTGHALLHTLYQQnLK 155
Cdd:PRK08275 80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGDYAVK----KVHHMG------SYVLPMPEGHDIKKVLYRQ-LK 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 156 NHTTIFSEWY-ALDLVKNADGAVVGCTALCIETGEVVYFKARATVLATGGAGRI-----------YQSTTNAhintGDGV 223
Cdd:PRK08275 149 RARVLITNRImATRLLTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLglpasgylfgtYENPTNA----GDGY 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 224 GMAIRAGVPVQDMEMWQFHP-----TGIAGAGVlvtegcRGE-GGYLLNKHGERFMERYAPNAKdlagrdvvarsIMIEI 297
Cdd:PRK08275 225 AMAYHAGAELANLECFQINPlikdyNGPACAYV------TGPlGGYTANAKGERFIECDYWSGQ-----------MMWEF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 298 -REGRGCDGPwgphAKLKLDHLGKEV---LESRLPGILELSRTFAHV--------DPVKEPIPVIPTChymmggiptkvT 365
Cdd:PRK08275 288 yQELQSGNGP----VFLKLDHLAEETiqtIETILHTNERPSRGRFHEgrgtdyrqQMVEMHISEIGFC-----------S 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 366 GQALT---VNEQGEDVViPGLFAVGEIACVsvhganrlGGNSLLDLVVFGRAVGLHLQESIAEQgDLLDATEAEIDASLE 442
Cdd:PRK08275 353 GHSASgvwVNEKAETTV-PGLYAAGDMASV--------PHNYMLGAFTYGWFAGENAAEYVAGR-DLPEVDAAQVEAERA 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 443 RLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAMAKGLEQLKAIRERLKNARLDDTSsefNTQRVecLELDNLMET 522
Cdd:PRK08275 423 RVLAPLHREDGLPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARDPH---ELMRA--LEVSSIRDC 497
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 490997943 523 AYATAVSANFRTESRGA--HSRFDFPDRDDENWLCHS-LYLPESESMTRRSVNMEP 575
Cdd:PRK08275 498 AEMAARASLFRTESRWGlyHYRVDFPERNDAEWFCHThLRKDEDGRMVSFKRPVEP 553
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
7-426 |
2.18e-29 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 121.87 E-value: 2.18e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHE-----DNWEWHMYDTVKGSDYIGD 81
Cdd:PRK06481 61 KYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKaqgiaDSNDKFYEETLKGGGGTND 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 82 QDAIEYMCKTGPEAILELDHMGLpfsRLENGTIYqrpfGGQSknfggEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161
Cdd:PRK06481 141 KALLRYFVDNSASAIDWLDSMGI---KLDNLTIT----GGMS-----EKRTHRPHDGSAVGGYLVDGLLKNVQERKIPLF 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 162 SEWYALDLVKNaDGAVVGCTALcIETGEVVYFKARATVLATGGAGRIYQ------------STTNAHINTGDGVGMAIRA 229
Cdd:PRK06481 209 VNADVTKITEK-DGKVTGVKVK-INGKETKTISSKAVVVTTGGFGANKDmiakyrpdlkgyVTTNQEGSTGDGIKMIEKL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 230 GVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFM-----------------ERYAPNAKDLAGRDVVaRS 292
Cdd:PRK06481 287 GGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKDRV-KA 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 293 IMIEIREGRGCDGPwgphaklKLDHLGKE--VLESRLPGIL-------------ELSRTFA-HVDPVKEP---IPVIPTC 353
Cdd:PRK06481 366 IAQYEEKGFVEEGK-------TIDELAKKinVPAETLTKTLdtwnkavknkkdeAFGRTTGmDNDLSTGPyyaIKIAPGI 438
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490997943 354 HYMMGGIPTKVTGQALTVNEQGedvvIPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAVGLHLQESIAEQ 426
Cdd:PRK06481 439 HYTMGGVKINTNTEVLKKDGSP----ITGLYAAGEVTG-GLHGENRIGGNSVADIIIFGRQAGTQSAEFAKAQ 506
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
142-416 |
1.68e-24 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 108.71 E-value: 1.68e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 142 GHALLHTLYQQ---NLKNHTTIFSEWYALDLVKNA----DGA----VVGC--TALCIETGEVVYFKARATVLATGG---- 204
Cdd:PTZ00306 543 GFTIMRTLEDHirtKLSGRVTIMTETTVTSLLSESsarpDGVreirVTGVryKQASDASGQVMDLLADAVILATGGfsnd 622
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 205 ----------AGRIYQ-STTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAG-------AGVLVTEGCRGEGGYLLN 266
Cdd:PTZ00306 623 htpnsllreyAPQLSGfPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkdpsnrTKYLGPEALRGSGGVLLN 702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 267 KHGERFMeryapNAKDLagRDVVARSIMIEIREGRGCDGPWGPHAKL-----KLdhLGKEVLE----------------- 324
Cdd:PTZ00306 703 KNGERFV-----NELDL--RSVVSQAIIAQGNEYPGSGGSKFAYCVLneaaaKL--FGKNSLGfywkrlglfqrvddvkg 773
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 325 -SRLPG--ILELSRT---FAHVDPVKEPIP---------------------VIPTCHYMMGG--------IPTKVTGQAL 369
Cdd:PTZ00306 774 lAKLIGcpVENLHRTletYERLSTKKVACPltgkvvfpcvvgtqgpyyvafVTPSIHYTMGGclispsaeMQMEDNSVNI 853
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 490997943 370 TVNEQGedvvIPGLFAVGEIACvSVHGANRLGGNSLLDLVVFGRAVG 416
Cdd:PTZ00306 854 FEDRRP----ILGLFGAGEVTG-GVHGGNRLGGNSLLECVVFGKIAG 895
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
152-572 |
7.38e-21 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 96.53 E-value: 7.38e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 152 QNLKNHTTIFsewyalDLVKNaDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQ--STTNAH-------INTGDG 222
Cdd:PRK06854 148 DNVLNRVFIT------DLLVD-DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRprSPGEGRgrmwyppFNTGSG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 223 VGMAIRAGVPVQDMEMwQFHPT----GIA--GAGVLvtegcrGEGGYLLNKHGERFMERYAPNAKDLAGRDVVAR----- 291
Cdd:PRK06854 221 YAMGIRAGAEMTTFEN-RFIPLrfkdGYGpvGAWFL------LFKAKAVNALGEEYEAKNAAELKKYVPYADYKPiptcl 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 292 ---SIMIEIREGRgcdgpwGP-----HAKLKLDHLGKEVLESRL---PGILELSRTfAHVDPVKEPIPVIPTCHYMMGGI 360
Cdd:PRK06854 294 rnyATVEENKAGR------GPiymdtEEALQDKHLESELWEDFLdmtPGQALLWAA-QNIEPEEENSEIMGTEPYIVGSH 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 361 PT------------------KVTGQALTVNeqgedvvipGLFAVGEIACVSVH----GA---NRLGGNSLLDLVVFGRAV 415
Cdd:PRK06854 367 SGasgywvsgpedwvpeeykWGYNRMTTVE---------GLFAAGDVVGGSPHkfssGSfaeGRIAAKAAVRYILDNKDE 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 416 GLHLQESIAEqgDLLDateaEIDASLERLNRWNG-------NRNGEDPVEIRKALQECM-----------QHNfsvfreG 477
Cdd:PRK06854 438 KPEIDDDQIE--ELKK----EIYAPLERYEEFKDystdpdvNPNYISPEQLEERLQKIMdeyaggistnyTTN------E 505
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 478 DAMAKGLEQLKAIRERLKNARLDDTSsefntQRVECLELDNLMETAYATAVSANFRTESR--GAHSRFDFPDRDDENWLC 555
Cdd:PRK06854 506 KLLEIALELLEMLEEDSEKLAARDLH-----ELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDENWKC 580
|
490
....*....|....*....
gi 490997943 556 --HSLYLPESESMTRRSVN 572
Cdd:PRK06854 581 fvNSRYDPGTGEWTIRKLP 599
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
170-579 |
7.45e-21 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 97.23 E-value: 7.45e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 170 VKNADGAVVGCTALCIETGEVVYFKARATVLATGGAGRI-----------YQSTTNAhintGDGVGMAIRAGVPVQDMEM 238
Cdd:PRK13800 169 VLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLglpasgylygtYENPTNA----GDGYSMAYHAGAELSGIEC 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 239 WQFHP-----TGIAGAGVlvtegCRGEGGYLLNKHGERFMEryapnakdlagRDVVARSIMIEIRegRGCDGPWGPhAKL 313
Cdd:PRK13800 245 FQINPlikdyNGPACAYV-----ANPFGGYQVNAQGERFVD-----------SDYWSGQMMAEVK--REIESARGP-IYL 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 314 KLDHLGKEVLeSRLPGILELSR-----TFaHVD--------PVKEPIPVIPTChymmGGiptkVTGQALTVNEQGEDVVi 380
Cdd:PRK13800 306 KVSHLPEETL-SALESILHTTErptrgTF-HANrghdyrthDIEMHISEIGLC----SG----HSASGVWVDEHARTTV- 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 381 PGLFAVGEIACVSvHganrlggNSLLDLVVFGRAVGLHLQESIAEQGDLLDATEAEIDASLERLNRWNGNRNGEDPVEIR 460
Cdd:PRK13800 375 PGLYAAGDLACVP-H-------NYMIGAFVFGDLAGAHAAGTLAEVPAPGELPADQLAEAHELIYRPLRHPDGPPQPQVE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 461 KALQECMQHNFSVFREGDAMAKGLEQLKAIRERLK--NARlddTSSEFntqrVECLELDNLMETAYATAVSANFRTESRG 538
Cdd:PRK13800 447 YKLRRFVNDYVAPPKTAAKLSIAVETFERMAAEIAgmGAR---TPHEL----MRCAEVSFIRDCAEMAARSSLTRTESRW 519
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 490997943 539 A--HSRFDFPDRDDENWLCHsLYLPESES----MTRRSVnmEPKLRP 579
Cdd:PRK13800 520 GlyHDRADLPERDDASWGYH-LNLRKGDDgemeFLKRPV--APYFVP 563
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
166-418 |
1.18e-05 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 47.96 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 166 ALDLVKNADGAVVGCTALCIetGEVVYFKAR-ATVLATGG---------------AGRIYQSTTNahiNTGDGVGMAIRA 229
Cdd:PRK07121 200 ATRLIVDDDGRVVGVEARRY--GETVAIRARkGVVLAAGGfamnremvaryapayAGGLPLGTTG---DDGSGIRLGQSA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 230 GVPVQDMEM---WQFhptgIAGAGVLVTegcrgegGYLLNKHGERF--------------MERYAPNAKDLAGRDVVARS 292
Cdd:PRK07121 275 GGATAHMDQvfaWRF----IYPPSALLR-------GILVNARGQRFvnedtygarigqfiLEQPGGTAYLIVDEALFEEA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 293 IMIEiregRGCDGPWGPHAKlKLDHLgkEVLESRL---PGILElsRTFAH--------VDPV--KEP------------- 346
Cdd:PRK07121 344 RAQL----RPQIDGRTPGAW-KAETV--EELARKLgipPGGLQ--ATVDAynraaaggEDPPfhKQPewlrpldtgpfaa 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 347 ----IPVIPTCHYMMGGIPTKV-TGQALtvNEQGEdvVIPGLFAVGEIAC-------VSvhganrlgGNSLLDLVVFGRA 414
Cdd:PRK07121 415 idlsLGKAPTPGFTLGGLRVDEdTGEVL--RADGA--PIPGLYAAGRCASgiasngyVS--------GLSLADCSFFGRR 482
|
....
gi 490997943 415 VGLH 418
Cdd:PRK07121 483 AGRH 486
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
174-278 |
3.24e-05 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 46.95 E-value: 3.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 174 DGAVVGCTALciETGEVVYFKAR-ATVLATGG-----AGRI-YQS-------TTNAHINTGDGVGMAIRAGVPVQDMEMW 239
Cdd:PRK07843 238 DGRVTGVHAA--ESGEPQLIRARrGVILASGGfehneQMRAkYQRapigtewTVGAKANTGDGILAGEKLGAALDLMDDA 315
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 490997943 240 QFHPTgiagagVLVTEG---CRGE----GGYLLNKHGERFMERYAP 278
Cdd:PRK07843 316 WWGPT------IPLPGGpwfALSErnlpGSIIVNMSGKRFMNESAP 355
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
142-418 |
4.60e-05 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 46.29 E-value: 4.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNaDGAVVGCTAlcIETGEVVYFKARATVL-ATGGAG------RIYQ---- 210
Cdd:PRK12844 207 GAALIGRMLEAALAAGVPLWTNTPLTELIVE-DGRVVGVVV--VRDGREVLIRARRGVLlASGGFGhnaemrKRYQpqpn 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 211 --STTNAHI-NTGDGVGMAIRAGVPVQDMEM--W---QFHPTGIAGAGVLVTEGCRgEGGYLLNKHGERFMER---YAPN 279
Cdd:PRK12844 284 sgDWTNANPgDTGEVIEAAMRLGAALDLMDEawWvpgAPLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEV 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 280 AKDLAGRDVV-ARSIMIEIREGRgcdGPWGPHAKLKLDhlgKEVLES----RLPGILELSR-----------------TF 337
Cdd:PRK12844 363 GRAMYAQDAVpAWMIMDSRYRKR---YLFGTIPPGPTP---QEWLDSgymkRADTIEELAGktgidpaglaatverfnGF 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 338 A------------------HVDPVKEP----IPVIPTCHYMMGGIPTKV-TGQALTVNEQG-----EDVVIPGLFAVGEi 389
Cdd:PRK12844 437 AatgtdpdfhrgesaydryYGDPTNKPnpslGPLDKPPFYAVRMVPGDVgTSGGLLTDEHArvlreDGSVIPGLYATGN- 515
|
330 340 350
....*....|....*....|....*....|
gi 490997943 390 ACVSVHGANRLG-GNSLLDLVVFGRAVGLH 418
Cdd:PRK12844 516 CTASVMGRTYPGaGASIGNSFVFGYIAALH 545
|
|
| PRK12837 |
PRK12837 |
FAD-binding protein; |
174-291 |
1.13e-03 |
|
FAD-binding protein;
Pssm-ID: 237222 [Multi-domain] Cd Length: 513 Bit Score: 41.74 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997943 174 DGAVVGctALCIETGEVVYFKARATV-LATGGAgriyqsTTNAHINTGDGV--------------GMAIRAGVPV----- 233
Cdd:PRK12837 204 DGRVVG--AVVERGGERRRVRARRGVlLAAGGF------EQNDDMRARYGVpgsardtmggpgntGLAHQAAIAVgadtd 275
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490997943 234 -QDMEMWQ---FHPTGIAGAGVLVTegcrgeGGYLLNKHGERFMERYAPnaKDLAGRDVVAR 291
Cdd:PRK12837 276 lMDQAWWSpglTHPDGRSAFALWFT------GGIFVDQHGERFVNESAP--YDRLGRAVIAE 329
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
357-422 |
4.24e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 39.88 E-value: 4.24e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490997943 357 MGGIPTKVTGQALtvNEQGEdvVIPGLFAVGEIACV---SVHGANRLGGNSLLDLVVFGRAVGLHLQES 422
Cdd:PRK12834 485 LGGLETDLDSRVL--GADGT--PLPGLYAAGEAAGFgggGVHGYNALEGTFLGGCIFSGRAAGRAAARA 549
|
|
| |
