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Conserved domains on  [gi|491050727|ref|WP_004912378|]
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MULTISPECIES: amino acid permease [Providencia]

Protein Classification

amino acid permease( domain architecture ID 11438095)

amino acid permease facilitates the transport of amino acids; similar to Mycobacterium tuberculosis L-asparagine permease

Gene Ontology:  GO:0055085|GO:0006865|GO:0016020|GO:0015171
PubMed:  10931886|24038584|25043943
TCDB:  2.A.3.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-452 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


:

Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 604.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:COG1113   88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIVGGAAIMMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:COG1113  168 AFIVVGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 242 IRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPK 321
Cdd:COG1113  248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 322 AFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVPM 401
Cdd:COG1113  328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 491050727 402 WPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKKPA 452
Cdd:COG1113  408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-452 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 604.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:COG1113   88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIVGGAAIMMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:COG1113  168 AFIVVGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 242 IRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPK 321
Cdd:COG1113  248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 322 AFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVPM 401
Cdd:COG1113  328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 491050727 402 WPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKKPA 452
Cdd:COG1113  408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
proY PRK10580
putative proline-specific permease; Provisional
 1-457 0e+00

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 521.30  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   1 MQSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYAS 80
Cdd:PRK10580   1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  81 HYLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAI 160
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 161 IAMIVGGAAIMMFGFGQAAdHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAV 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGG-QPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSV 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 241 PIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAP 320
Cdd:PRK10580 240 PMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 321 KAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVP 400
Cdd:PRK10580 320 KIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVP 399

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 491050727 401 MWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKKPAKEAEV 457
Cdd:PRK10580 400 GGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAEA 456
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 2-450 3.43e-87

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 274.05  E-value: 3.43e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727    2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:TIGR01773   5 QSGLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADD 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:TIGR01773  85 AIGRWAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAII 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  162 AMIVGGAAiMMFGFGQAADhAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:TIGR01773 165 AFIILGAV-AIFGFAPGSE-VSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVI 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  242 IRILLFYVLTLFVLMCIYPWNQIG-QQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAP 320
Cdd:TIGR01773 243 WRIIVFYLGSIFIVVALLPWNSPNlLEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAP 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  321 KAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEiSQLKFPVP 400
Cdd:TIGR01773 323 RVFMKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANG-EAIKIRMW 401

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 491050727  401 MWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKK 450
Cdd:TIGR01773 402 LYPWLTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVFARR 451
AA_permease pfam00324
Amino acid permease;
15-451 9.99e-85

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 268.03  E-value: 9.99e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   15 HIRFMALGSAIGTGLFYGSAKAIETAGPA-VLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGARAGFFAGW 93
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   94 TYVFEMLIVCLADVTAFGVYMKLW--FPEV-AQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVGGAAI 170
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIpYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  171 MMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVL 250
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  251 TLFVLMCIYPWNQIG------QQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFT 324
Cdd:pfam00324 241 SLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  325 KLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVPMW-- 402
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAPlg 400

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 491050727  403 PVAPILAIAFMVFVFGVLGYFESTR-------------IALYVGVVWLVLLTIAYALWVKKP 451
Cdd:pfam00324 401 PLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVKNW 462
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-452 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 604.04  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:COG1113   88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIVGGAAIMMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:COG1113  168 AFIVVGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 242 IRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPK 321
Cdd:COG1113  248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 322 AFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVPM 401
Cdd:COG1113  328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 491050727 402 WPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKKPA 452
Cdd:COG1113  408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
proY PRK10580
putative proline-specific permease; Provisional
 1-457 0e+00

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 521.30  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   1 MQSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYAS 80
Cdd:PRK10580   1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  81 HYLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAI 160
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 161 IAMIVGGAAIMMFGFGQAAdHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAV 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGG-QPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSV 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 241 PIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAP 320
Cdd:PRK10580 240 PMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 321 KAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVP 400
Cdd:PRK10580 320 KIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVP 399

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 491050727 401 MWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKKPAKEAEV 457
Cdd:PRK10580 400 GGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAEA 456
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
1-450 1.36e-137

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 403.40  E-value: 1.36e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   1 MQSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGP-AVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYA 79
Cdd:COG0833    4 SEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  80 SHYLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIA 159
Cdd:COG0833   84 TRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVIT 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 160 IIAMIVGGAAIMmfgFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINA 239
Cdd:COG0833  164 VIAFIIVGLLMI---FGIIGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQ 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 240 VPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQA 319
Cdd:COG0833  241 VFWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 320 PKAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPE--EISQLKF 397
Cdd:COG0833  321 PKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQggDLEDLKY 400

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 491050727 398 PVPMWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKK 450
Cdd:COG0833  401 KAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKKT 453
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 5-450 4.10e-119

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 356.35  E-value: 4.10e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   5 SQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLG 84
Cdd:PRK11049  16 QSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  85 ARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMI 164
Cdd:PRK11049  96 PWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALI 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 165 VGGAAIMMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRI 244
Cdd:PRK11049 176 VVGLVMVAMHFQSPTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRI 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 245 LLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFT 324
Cdd:PRK11049 256 IMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFA 335

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 325 KLTKNGVPWMTVLVMVAVLLVGVVLNYVIPD--DVFVVIASIATFATIWVWLMILLSQFAMRKKmSPEEISQLKFPVPMW 402
Cdd:PRK11049 336 KLSKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVTTVSAILFMFVWTIILCSYLVYRKQ-RPHLHEKSIYKMPLG 414

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 491050727 403 PVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKK 450
Cdd:PRK11049 415 KLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKK 462
PRK10238 PRK10238
aromatic amino acid transporter AroP;
2-455 2.16e-117

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 351.56  E-value: 2.16e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:PRK10238   5 QHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYK 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:PRK10238  85 YWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIVGGAAIMmfgFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:PRK10238 165 AMIIFGGWLL---FSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVI 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 242 IRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPK 321
Cdd:PRK10238 242 YRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPK 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 322 AFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQlKFPVPM 401
Cdd:PRK10238 322 ALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVT-RFPALL 400

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 491050727 402 WPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYalWVKKPAKEA 455
Cdd:PRK10238 401 YPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGY--LFKEKTAKA 452
PRK10249 PRK10249
phenylalanine transporter; Provisional
 2-450 2.46e-110

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 333.88  E-value: 2.46e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:PRK10249  14 NQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYK 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:PRK10249  94 YWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAII 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIvgGAAIMMFGFGQAADHAvGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:PRK10249 174 GMI--GFGLWLLFSGHGGEKA-SIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVV 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 242 IRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPK 321
Cdd:PRK10249 251 YRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPK 330

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 322 AFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSpEEISQLKFPVPM 401
Cdd:PRK10249 331 FLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMR-RQGRETQFKALL 409

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 491050727 402 WPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKK 450
Cdd:PRK10249 410 YPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRRK 458
PRK10746 PRK10746
putative transport protein YifK; Provisional
 2-446 2.02e-106

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 323.69  E-value: 2.02e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:PRK10746   3 DNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:PRK10746  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIVGGAAIMMFGFGQAAdHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:PRK10746 163 VMIVIGLGVIFFGFGNGG-QSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVL 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 242 IRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPK 321
Cdd:PRK10746 242 WRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPA 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 322 AFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPD--DVFVVIASIATFATIWVWLMILLSQFAMRKKMSpEEISQLKFPV 399
Cdd:PRK10746 322 AMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNpqRVFVYVYSASVLPGMVPWFVILISQLRFRRAHK-AAIASHPFRS 400

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 491050727 400 PMWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYAL 446
Cdd:PRK10746 401 ILFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKV 447
PRK11387 PRK11387
S-methylmethionine permease;
1-446 1.37e-92

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 288.29  E-value: 1.37e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   1 MQSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPA-VLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYA 79
Cdd:PRK11387   6 SQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  80 SHYLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIA 159
Cdd:PRK11387  86 ARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVT 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 160 IIAMIV-GGAAimMFGFGQAAD--HAVGVSNLfIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRA 236
Cdd:PRK11387 166 ILAFIVlGGAA--IFGFIPMQDgsPAPGLRNL-TAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVA 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 237 INAVPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHE 316
Cdd:PRK11387 243 IRTTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNE 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 317 GQAPKAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKM--SPEEISQ 394
Cdd:PRK11387 323 GTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHlrDGKALSE 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|..
gi 491050727 395 LKFPVPMWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYAL 446
Cdd:PRK11387 403 LAYRAPWYPLTPILGFVLCLLACVGLAFDPSQRIALWCGIPFVALCYGAYYL 454
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 2-450 3.43e-87

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 274.05  E-value: 3.43e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727    2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:TIGR01773   5 QSGLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADD 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:TIGR01773  85 AIGRWAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAII 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  162 AMIVGGAAiMMFGFGQAADhAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVP 241
Cdd:TIGR01773 165 AFIILGAV-AIFGFAPGSE-VSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVI 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  242 IRILLFYVLTLFVLMCIYPWNQIG-QQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAP 320
Cdd:TIGR01773 243 WRIIVFYLGSIFIVVALLPWNSPNlLEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAP 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  321 KAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEiSQLKFPVP 400
Cdd:TIGR01773 323 RVFMKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANG-EAIKIRMW 401

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 491050727  401 MWPVAPILAIAFMVFVFGVLGYFESTRIALYVGVVWLVLLTIAYALWVKK 450
Cdd:TIGR01773 402 LYPWLTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVFARR 451
AA_permease pfam00324
Amino acid permease;
15-451 9.99e-85

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 268.03  E-value: 9.99e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   15 HIRFMALGSAIGTGLFYGSAKAIETAGPA-VLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGARAGFFAGW 93
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   94 TYVFEMLIVCLADVTAFGVYMKLW--FPEV-AQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVGGAAI 170
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIpYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  171 MMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVL 250
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  251 TLFVLMCIYPWNQIG------QQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFT 324
Cdd:pfam00324 241 SLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  325 KLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVPMW-- 402
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAPlg 400

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 491050727  403 PVAPILAIAFMVFVFGVLGYFESTR-------------IALYVGVVWLVLLTIAYALWVKKP 451
Cdd:pfam00324 401 PLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVKNW 462
PRK15049 PRK15049
L-asparagine permease;
9-422 1.97e-77

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 249.92  E-value: 1.97e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   9 RGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGARAG 88
Cdd:PRK15049  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAA 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  89 FFAGWTYVFEMLIVCLADVTAFGVYMKLW--FPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVG 166
Cdd:PRK15049 108 YVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVV 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 167 GAaiMMFGFGQAAD-HAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRIL 245
Cdd:PRK15049 188 GT--VFLGSGQPLDgNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIG 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 246 LFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFTK 325
Cdd:PRK15049 266 LFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAK 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 326 LTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEISQLKFPVPMWPVA 405
Cdd:PRK15049 346 MSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFT 425

                        410
                 ....*....|....*..
gi 491050727 406 PILAIAFMVFVFGVLGY 422
Cdd:PRK15049 426 SWLTLLFLLSVLVLMAF 442
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 9-422 1.24e-76

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 247.20  E-value: 1.24e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727    9 RGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPA-VLLAYIIGGAAVFMVMRALGEMAVHRP-LAGSFSQYASHYLGAR 86
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAgLLIGYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDPA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   87 AGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVG 166
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIIL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  167 GAAIMMfgfGQAADHAvGVSNLFIHD--GFMPNGIGGVIASFAVVM----FAFGGIEVIGITASEAKNPETTIPRAINAV 240
Cdd:TIGR00913 162 SIILNC---GGGPNHG-YIGFRYWHDpgAFAGGTIGGRFKGVCSVFvtaaFSFGGTELVALTAGEAANPRKSIPRAAKRT 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  241 PIRILLFYVLTLFVLMCIYPWN---------QIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMY 311
Cdd:TIGR00913 238 FWRILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLY 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  312 GMAHEGQAPKAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEE 391
Cdd:TIGR00913 318 ALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQG 397

                         410       420       430
                  ....*....|....*....|....*....|...
gi 491050727  392 IS--QLKFPVPMWPVAPILAIAFMVFVFGVLGY 422
Cdd:TIGR00913 398 RSldELPYKSQTGPYGSYYALFFNILILIAQGY 430
PRK10836 PRK10836
lysine transporter; Provisional
 7-409 3.72e-73

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 238.57  E-value: 3.72e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   7 LARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPA-VLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGA 85
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  86 RAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIW---VLSIIFFigaINLCHVKTFGEMEFWLSIIKVIAIIA 162
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWsalFLGVIFL---LNYISVRGFGEAEYWFSLIKVTTVIV 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 163 MIVGGaAIMMFGFGQAADHAvGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPI 242
Cdd:PRK10836 170 FIIVG-VLMIIGIFKGAEPA-GWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFW 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 243 RILLFYVLTLFVLMCIYPW-------NQIGQQG-SPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMA 314
Cdd:PRK10836 248 RILLFYVFAILIISLIIPYtdpsllrNDVKDISvSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLA 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 315 HEGQAPKAFTKLTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKK--MSPEEI 392
Cdd:PRK10836 328 CDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGyvLQGHDL 407

                        410
                 ....*....|....*..
gi 491050727 393 SQLKFPVPMWPVAPILA 409
Cdd:PRK10836 408 NDLPYRSGFFPLGPIFA 424
PRK10197 PRK10197
GABA permease;
19-420 1.66e-64

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 214.87  E-value: 1.66e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  19 MALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGARAGFFAGWTYVFE 98
Cdd:PRK10197   2 LSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  99 MLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVGGAAIMMfGFGQA 178
Cdd:PRK10197  82 WVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAIS-GFYPY 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 179 ADhAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVLTLFVLMCI 258
Cdd:PRK10197 161 AE-VSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 259 YPWNQIGQQG-SPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFTKLTKNGVPWMTVL 337
Cdd:PRK10197 240 IPWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVL 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 338 VMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKMSPEEiSQLKFPVPMWPVAPILAIAFMVFVF 417
Cdd:PRK10197 320 LSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEG-SEIRLRMWLYPWLTWLVIGFITFVL 398


                 ...
gi 491050727 418 GVL 420
Cdd:PRK10197 399 VVM 401
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
2-456 3.47e-55

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 189.72  E-value: 3.47e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  82 YLGARAGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAII 161
Cdd:COG0531   84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 162 AMIVGGAAimmfgfgqaadhAVGVSNLfihDGFMPN--GIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINA 239
Cdd:COG0531  164 LFIVVGLF------------AFDPANF---TPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIIL 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 240 VPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQA 319
Cdd:COG0531  229 SLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLL 308

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 320 PKAFTKL-TKNGVPWmtvlVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILLSQFAMRKKmSPEEISQLKFP 398
Cdd:COG0531  309 PKVFAKVhPRFGTPV----NAILLTGVIALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRR-RPDLPRPFRVP 383

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 491050727 399 vpmWPVAPILAIAFMVFVFGVLGYfestrIALYVGVVWLVLLTIAYALWVKKPAKEAE 456
Cdd:COG0531  384 ---LPLIPILGILLCLFLLYLLGP-----GALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 7-422 2.10e-31

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 124.86  E-value: 2.10e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727    7 LARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGAR 86
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGKAGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGEL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   87 AGFFAGWTYVFEMLIVCLADVTAFGVYMKLWFPEVA----------------QWIWVLSIIFFIGAINLCHVKTFGEMEF 150
Cdd:TIGR00909  81 TAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPGVGldlpavltakpgnggvFNLPALLIVLFLTYILYLGAKESGKVND 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  151 WLSIIKVIAIIAMIVGGAAIMMfgfgqaadhavgvSNLFIHdgFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPE 230
Cdd:TIGR00909 161 ILVVLKVAALLLFAALGAIHFA-------------SNNYTP--FMPMGFGGVGAATALVFFAFIGFEAISTAAEEVKNPE 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  231 TTIPRAINAVPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMM 310
Cdd:TIGR00909 226 RDIPKAIILSLIVVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVL 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  311 YGMAHEGQAPKAFTKL-TKNGVPWMTVLVMVAVLLVGVVLNYVIPDDVFVVIASIATFATIWVWLMILlsqfamrKKMSP 389
Cdd:TIGR00909 306 FAMSRDGLLPGSLSKVhPKTGTPHMSIIIFSLTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIIL-------RRRRP 378

                         410       420       430
                  ....*....|....*....|....*....|...
gi 491050727  390 EeiSQLKFPVPMWPVAPILAIAFMVFVFGVLGY 422
Cdd:TIGR00909 379 D--IQRAFRCPLVPVLPVLVVSYCIYLLLNLGP 409
AA_permease_2 pfam13520
Amino acid permease;
18-444 3.70e-22

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 98.15  E-value: 3.70e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   18 FMALGSAIGTGLFYGSAkaIETAGPAVLLAYIIG-GAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGARAGFFAGWTYV 96
Cdd:pfam13520   8 ALVIGSVIGSGIFVAPL--VASGGPALIVWGWIAaIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNW 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   97 FE-MLIVCLADVTAFGVYMKLWFPEVAQWIWVLSIIF-----FIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVGGAAI 170
Cdd:pfam13520  86 FAyVLGLASSASVAASYLLSALGPDLVPTTWLTYGIAiailiIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGLV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  171 MMFGFGQAadhavgvSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPetTIPRAINAVPIRILLFYVL 250
Cdd:pfam13520 166 TADGGGFN-------LLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKR--NVPKAIFIGVIIVGVLYIL 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  251 TLFVLMCIYPWNQI---GQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAP--KAFTK 325
Cdd:pfam13520 237 VNIAFFGVVPDDEIalsSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAK 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  326 LTKNGVPWMTVLVMVAVLLVGVVLNYVIPDDvFVVIASIATFATIWVWLMILLSQFAMRKKMspeeiSQLKFPVPMWPVA 405
Cdd:pfam13520 317 VNKFGSPIRAIILTAILSLILLLLFLLSPAA-YNALLSLSAYGYLLSYLLPIIGLLILRKKR-----PDLGRIPGRWPVA 390

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 491050727  406 pILAIAFMVFVFgVLGYFESTRIALYVGVVWLVLLTIAY 444
Cdd:pfam13520 391 -IFGILFSLFLI-VALFFPPVGPATGSSLNYAIILIVAF 427
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 3-332 4.53e-21

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 96.04  E-value: 4.53e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727    3 STSQLARGLSARHIRFMALGSAIGTGLF-YGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASH 81
Cdd:TIGR00906  22 EESKMKRCLTTWDLMALGIGSTIGAGIYvLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   82 YLGARAGFFAGWTYVFEMLIVCLADVTAFG----------------VYMKLWFPEVAQWiwvLSIIFFIGAINLCHVKTF 145
Cdd:TIGR00906 102 TVGELWAFITGWNLILEYVIGTAAVARSWSayfdellnkqigqfrrTYFKLNYDGLAEY---PDFFAVCLILLLAVLLSF 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  146 GEMEFwlSIIKVIAIIAMIVGGAAIMMFGFGQAADHAVGVSNLFIHDGFMPNGIGGVIASFAVVMFAFGGIEVIGITASE 225
Cdd:TIGR00906 179 GVKES--AWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEKGAGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEE 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  226 AKNPETTIPRAINAVPIRILLFYVLTLFVLMCIYPWNQIGQQgSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFG 305
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335

                         330       340
                  ....*....|....*....|....*...
gi 491050727  306 AGRMMYGMAHEGQAPKAFTKL-TKNGVP 332
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQInSKTKTP 363
frlA PRK11357
amino acid permease;
2-326 1.09e-10

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 63.34  E-value: 1.09e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   2 QSTSQLARGLSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVL--LAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYA 79
Cdd:PRK11357   1 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  80 SHYLGARAGFFAGWTYVF-----EMLIVCLADVTAFGVYMKlWFPEVAQWIWVLSIIFFIgAINLCHVKTFGEMEFWLSI 154
Cdd:PRK11357  81 KNAGSRPLAFLSGWASFWandapSLSIMALAIVSNLGFLTP-IDPLLGKFIAAGLIIAFM-LLHLRSVEGGAAFQTLITI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 155 IKVIAIIAMIVGGAAIMMFG-FGQAADHAVGVSNlfihdgfmpnGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTI 233
Cdd:PRK11357 159 AKIIPFTIVIGLGIFWFKAEnFAAPTTTAIGATG----------SFMALLAGISATSWSYTGMASICYMTGEIKNPGKTM 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 234 PRAINAVPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSL-GIQSAANIlnIVVITAAI---SAINSDIFGAGRM 309
Cdd:PRK11357 229 PRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpALGSTAGI--FVAITAMIvilGSLSSCVMYQPRL 306

                        330
                 ....*....|....*..
gi 491050727 310 MYGMAHEGQAPKAFTKL 326
Cdd:PRK11357 307 EYAMAKDNLFFKCFGHV 323
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 22-320 1.90e-09

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 59.76  E-value: 1.90e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   22 GSAIGTGLFYGSAKAIETAGpAVLLAYIIGGA-AVFMVMRAL--GEMAVHRPLAGSFSQYASHYLGARAGFFAGWtyvFE 98
Cdd:TIGR00911  55 GTIIGSGIFVSPKGVLKNAG-SVGLALIMWAVcGIFSIVGALvyAELGTTIPKSGGEYNYILEVFGPLLAFLRLW---IE 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   99 MLIV----CLADVTAFG------VYMKLWFPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVGGa 168
Cdd:TIGR00911 131 LLVIrpgsQAVNALNFAiyiltpVFPDCEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITG- 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  169 aIMMFGFGQAADHavGVSNLFihDGFMPNgIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFY 248
Cdd:TIGR00911 210 -WVQLGKGGVESL--NPKNAF--EGTETS-AGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIY 283

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 491050727  249 VLTLFVLMCIYPWNQIGQQGSPFVQIFDSLgIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAP 320
Cdd:TIGR00911 284 VLTNIAYFTVLSPEELLASLAVAVDFGERL-LGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLP 354
PRK11021 PRK11021
putative transporter; Provisional
 23-332 2.05e-07

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 52.99  E-value: 2.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  23 SAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPLAGSFSQYASHYLGARAGFFAGWTYVFEMLIV 102
Cdd:PRK11021  13 SLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWLFLSVIPVG 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 103 CLADVT-AFGVYMKLW-FPEVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIkVIAIIAMIVGGAAIMMFGFGQAAD 180
Cdd:PRK11021  93 LPAALQiAAGFGQALFgWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALL-IVALVVAIWWAGDIKPADIPFPAP 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 181 HAVGVSNLFihdgfmpngiggviASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVLTLFVLMCIYP 260
Cdd:PRK11021 172 GSIEWSGLF--------------AALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPA 237

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 491050727 261 WNQIGQQGSPFVQIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFTKLTKNGVP 332
Cdd:PRK11021 238 YGDKQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSARGVP 309
PRK10644 PRK10644
arginine/agmatine antiporter;
18-332 9.35e-07

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 50.94  E-value: 9.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  18 FMALGSAIGTGLFYGSAKAIETAGPAVL--LAYIIGGAAVFMVMRALGEMAvhrPLAGSFSQYASHYLGARAGFFAGWTY 95
Cdd:PRK10644  17 LMVAGNIMGSGVFLLPANLASTGGIAIYgwLVTIIGALGLSMVYAKMSSLD---PSPGGSYAYARRCFGPFLGYQTNVLY 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  96 VFEMLIVCLADVTAFGVYMKLWFP----EVAQWIWVLSIIFFIGAINLCHVKTFGEMEFWLSIIKVIAIIAMIVGGaaim 171
Cdd:PRK10644  94 WLACWIGNIAMVVIGVGYLSYFFPilkdPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG---- 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 172 MFGF-GQAADHAVGVSNLfihdgfmpNGIGGVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVL 250
Cdd:PRK10644 170 WFWFrGETYMAAWNVSGL--------GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVL 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 251 TLFVLMCIYPWNQIGQQGSPFVqifDSLGIQSAANILNIVVITAAISAINSD---IFGAGRMMYGMAHEGQAPKAFTKLT 327
Cdd:PRK10644 242 SSTAIMGMIPNAALRVSASPFG---DAARMALGDTAGAIVSFCAAAGCLGSLggwTLLAGQTAKAAADDGLFPPIFARVN 318


                 ....*
gi 491050727 328 KNGVP 332
Cdd:PRK10644 319 KAGTP 323
potE PRK10655
putrescine transporter; Provisional
 39-332 4.63e-04

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 42.32  E-value: 4.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  39 TAGPAVLLAYIIGGAAVFMvmralgemavHRPlaGSFSQYASHYLGARAGFFAGWTYVFEMLIVCLA-DVTAFGvYMKLW 117
Cdd:PRK10655  47 TAVGSMALAYAFAKCGMFS----------RKS--GGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAiAISAVG-YGTEL 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 118 FPevAQWIWVLSIIFFIGAINLCHVKTFGEMEFW--LSIIKVIAIIAMIVGGAAIMMFGFGqaadhavgvSNLFIhDGFM 195
Cdd:PRK10655 114 FG--ATLSPVQICLATIGVLWLCTVANFGGARITgqISSVTVWGVIIPVVGLSIIGWFWFS---------PSLYV-AAWN 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 196 PNGIG---GVIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFV 272
Cdd:PRK10655 182 PHHLPffsAVGSSIAMTLWAFLGLESACANSDAVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFG 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 273 QIFDSLGIQSAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFTKLTKNGVP 332
Cdd:PRK10655 262 LAFAQMFNPTVGKIVMALMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKIFSRVTKVDAP 321
cadB PRK10435
cadaverine/lysine antiporter;
202-332 1.70e-03

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 40.50  E-value: 1.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 202 VIASFAVVMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGIQ 281
Cdd:PRK10435 189 IIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGN 268

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 491050727 282 SAANILNIVVITAAISAINSDIFGAGRMMYGMAHEGQAPKAFTKLTKNGVP 332
Cdd:PRK10435 269 WAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDKNGIP 319
2A0309 TIGR00912
spore germination protein (amino acid permease); This model describes spore germination ...
 11-280 2.85e-03

spore germination protein (amino acid permease); This model describes spore germination protein GerKB and paralogs from Bacillus subtilis, Clostridium tetani, and other known or predicted endospore-forming members of the Firmicutes (low-GC Gram positive bacteria). Members show some similarity to amino acid permeases. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273333  Cd Length: 359  Bit Score: 39.96  E-value: 2.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   11 LSARHIRFMALGSAIGTGLFYGSAKAIETAGPAVLLAYIIGGAAVFMVMRALGEMAVHRPlAGSFSQYASHYLGARAGFF 90
Cdd:TIGR00912   3 ISSKQLIFLISSTMIGSGLLTLPALVSQSAGQDGWISIILGGLIIIFLLCLMIKIMSKFP-EKNFSEILSKYLGKILGRL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727   91 AGWTYVFEMLIVCLADVTAFGVYMKLWfPEVAQWIWVLSIIFFIGAINL-CHVKTFgemefwLSIIKVIAIIAMIVGGAA 169
Cdd:TIGR00912  82 LSILFILYFFLIAAYLIRIFADFIKTY-LLPRTPIIVIIILIIIVSIYIvRKGIEV------LLRTAEILLIIFLILFIL 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727  170 IMMFgfgqAADHAVGVSNLFI--HDGFMPNgiggVIASFAVVMFAFGGIEVIGITASEAKNpETTIPRAINAVPIRILLF 247
Cdd:TIGR00912 155 VLIL----LAPKLGNIKNLLPvlENGLSPI----LKGAYPVVTFAFGEIEIFFLLFPLLSK-KKKIKKSIIKAIIIGVLL 225

                         250       260       270
                  ....*....|....*....|....*....|...
gi 491050727  248 YVLTLFVLMCIYPWNQIGQQGSPFVQIFDSLGI 280
Cdd:TIGR00912 226 YILTTFVSISVFGGNVTKNLYWPTLELIKLINI 258
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
 116-264 4.72e-03

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 39.15  E-value: 4.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491050727 116 LWFPEVAQWIWVLSIIFFIgAINLCHVKTFGEMEFWLSI--IKVIAI-IAMIVGGAAIMMFGFGQAADHAVGVSnlFIHD 192
Cdd:PRK15238 126 FLGLNSTQVVGILAVIWMI-LVTFVASKGINKIAKVTSIggIAVMLLnIVLLLVSIIILILNGGHFAQPIGVSS--FVTS 202

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 491050727 193 gfmPN-GIGGVIA--SFAV-VMFAFGGIEVIGITASEAKNPETTIPRAINAVPIRILLFYVLTLFVLMCIYPWNQI 264
Cdd:PRK15238 203 ---PNpAYQSPIAvlSFVVfAIFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYSLAIFLWGVSTNWQQV 275
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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