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Conserved domains on  [gi|491099746|ref|WP_004961346|]
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immunity protein Tsi6 family protein [Serratia odorifera]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tsi6 pfam18660
Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas ...
 4-86 2.22e-40

Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas aeruginosa. The Tsi6 immunity protein adopts an all-alpha-helical fold that binds to a surface of Tse6.


:

Pssm-ID: 408442  Cd Length: 83  Bit Score: 128.56  E-value: 2.22e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491099746    4 TAIDYVNAALAVVKERQNTLPSFPLYQSALNQIQYIKDILEGNNNDKSKLHTITLGAYASKEFATTDPELAQHLSNVNYI 83
Cdd:pfam18660   1 TALDYVDRALALVQKRLKALPGFPIYQSIEQQLQYLRDVLEGEEKDKSKLHTLTFGAYAVKEFEETDPELARALSDANYI 80


                  ...
gi 491099746   84 ASQ 86
Cdd:pfam18660  81 ASQ 83
 
Name Accession Description Interval E-value
Tsi6 pfam18660
Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas ...
 4-86 2.22e-40

Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas aeruginosa. The Tsi6 immunity protein adopts an all-alpha-helical fold that binds to a surface of Tse6.


Pssm-ID: 408442  Cd Length: 83  Bit Score: 128.56  E-value: 2.22e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491099746    4 TAIDYVNAALAVVKERQNTLPSFPLYQSALNQIQYIKDILEGNNNDKSKLHTITLGAYASKEFATTDPELAQHLSNVNYI 83
Cdd:pfam18660   1 TALDYVDRALALVQKRLKALPGFPIYQSIEQQLQYLRDVLEGEEKDKSKLHTLTFGAYAVKEFEETDPELARALSDANYI 80


                  ...
gi 491099746   84 ASQ 86
Cdd:pfam18660  81 ASQ 83
 
Name Accession Description Interval E-value
Tsi6 pfam18660
Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas ...
 4-86 2.22e-40

Tsi6; Tsi6 inhibits the NADase activity of Tse6, an integral membrane toxin from Pseudomonas aeruginosa. The Tsi6 immunity protein adopts an all-alpha-helical fold that binds to a surface of Tse6.


Pssm-ID: 408442  Cd Length: 83  Bit Score: 128.56  E-value: 2.22e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491099746    4 TAIDYVNAALAVVKERQNTLPSFPLYQSALNQIQYIKDILEGNNNDKSKLHTITLGAYASKEFATTDPELAQHLSNVNYI 83
Cdd:pfam18660   1 TALDYVDRALALVQKRLKALPGFPIYQSIEQQLQYLRDVLEGEEKDKSKLHTLTFGAYAVKEFEETDPELARALSDANYI 80


                  ...
gi 491099746   84 ASQ 86
Cdd:pfam18660  81 ASQ 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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