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Conserved domains on  [gi|491117510|ref|WP_004975965|]
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MULTISPECIES: electron transfer flavoprotein-ubiquinone oxidoreductase [Acinetobacter]

Protein Classification

electron transfer flavoprotein-ubiquinone oxidoreductase( domain architecture ID 11428947)

electron transfer flavoprotein-ubiquinone oxidoreductase accepts electrons from ETF and reduces ubiquinone

CATH:  3.30.70.20|3.30.9.90|3.50.50.60
EC:  1.5.5.1
Gene Ontology:  GO:0004174|GO:0022900|GO:0046872|GO:0051539
SCOP:  4000064|4000127

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 466-568 8.72e-75

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


:

Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 8.72e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  466 GKLTFDRLSSVFVSNTVHEENQPAHLKLTDTSIPVNVNLPKWDEPAQRYCPAGVYEIMENDD-GSKRFQINAANCVHCKT 544
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEpGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 491117510  545 CDIKDPSQNITWVTPEGGGGPNYP 568
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
18-373 3.88e-63

Dehydrogenase (flavoprotein) [Energy production and conversion];


:

Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 208.67  E-value: 3.88e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  18 AGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHILSGAILePRAINELFPnwKEEGAPLNVPVTEDKtFFLMSPE 97
Cdd:COG0644    1 AGPAGSAAARRLAR-------AGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP--LGLDEPLERPVRGAR-FYSPGGK 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  98 KAQQAPHWmvpktmhnDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILYHaDGTVKgIQTGDmgigkdgepthnft 177
Cdd:COG0644   70 SVELPPGR--------GGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-DGRVV-VRTGD-------------- 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 178 pGYELHAKYTIFAEGCRGHLGKRLIQQFNLDKdadPQHYGIGIKELWEIDPAKH-KPGLVMHGAGwplsETGSSGGWWLY 256
Cdd:COG0644  126 -GEEIRADYVVDADGARSLLARKLGLKRRSDE---PQDYALAIKEHWELPPLEGvDPGAVEFFFG----EGAPGGYGWVF 197

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 257 HAENNQVTLGmivdlsytnphmypfmemqrwkthplikqyleggkrISYGaravtkggfNSLPKFTFPGGSLIGDDAGFL 336
Cdd:COG0644  198 PLGDGRVSVG------------------------------------IPLG---------GPRPRLVGDGVLLVGDAAGFV 232

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 491117510 337 NFAKIKGSHTAMKSGMLCGEAVFEAIAAGVAKGGDLA 373
Cdd:COG0644  233 DPLTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEALA 269
FAD_binding_2 super family cl46878
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 1-31 4.58e-04

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


The actual alignment was detected with superfamily member PRK07803:

Pssm-ID: 481218 [Multi-domain]  Cd Length: 626  Bit Score: 43.10  E-value: 4.58e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 491117510   1 MEHIEREsmEFDVVIVGAGPAGLSAAIKIRQ 31
Cdd:PRK07803   1 MTEVERH--SYDVVVIGAGGAGLRAAIEARE 29
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 466-568 8.72e-75

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 8.72e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  466 GKLTFDRLSSVFVSNTVHEENQPAHLKLTDTSIPVNVNLPKWDEPAQRYCPAGVYEIMENDD-GSKRFQINAANCVHCKT 544
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEpGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 491117510  545 CDIKDPSQNITWVTPEGGGGPNYP 568
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
18-373 3.88e-63

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 208.67  E-value: 3.88e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  18 AGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHILSGAILePRAINELFPnwKEEGAPLNVPVTEDKtFFLMSPE 97
Cdd:COG0644    1 AGPAGSAAARRLAR-------AGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP--LGLDEPLERPVRGAR-FYSPGGK 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  98 KAQQAPHWmvpktmhnDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILYHaDGTVKgIQTGDmgigkdgepthnft 177
Cdd:COG0644   70 SVELPPGR--------GGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-DGRVV-VRTGD-------------- 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 178 pGYELHAKYTIFAEGCRGHLGKRLIQQFNLDKdadPQHYGIGIKELWEIDPAKH-KPGLVMHGAGwplsETGSSGGWWLY 256
Cdd:COG0644  126 -GEEIRADYVVDADGARSLLARKLGLKRRSDE---PQDYALAIKEHWELPPLEGvDPGAVEFFFG----EGAPGGYGWVF 197

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 257 HAENNQVTLGmivdlsytnphmypfmemqrwkthplikqyleggkrISYGaravtkggfNSLPKFTFPGGSLIGDDAGFL 336
Cdd:COG0644  198 PLGDGRVSVG------------------------------------IPLG---------GPRPRLVGDGVLLVGDAAGFV 232

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 491117510 337 NFAKIKGSHTAMKSGMLCGEAVFEAIAAGVAKGGDLA 373
Cdd:COG0644  233 DPLTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEALA 269
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
476-570 2.71e-47

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 159.98  E-value: 2.71e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 476 VFVSNTVHEENQPaHLKLTDTSIPVNVNLpkwDEPAQRYCPAGVYEImendDGSKRFQINAANCVHCKTCDIKDPSQNIT 555
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEI----VGDGRLQINYENCLECGTCRIKCPTQNIT 72

                         90
                 ....*....|....*
gi 491117510 556 WVTPEGGGGPNYPNM 570
Cdd:COG2440   73 WVYPEGGGGVNYRFG 87
PRK10015 PRK10015
oxidoreductase; Provisional
 10-414 3.16e-29

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 120.08  E-value: 3.16e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  10 EFDVVIVGAGPAGLSAAIKIRQLAiennlndLSVCVVEKGSEVGAHILSGAILEPRAINELFPNWKEEgAPLNVPVTEDK 89
Cdd:PRK10015   5 KFDAIVVGAGVAGSVAALVMARAG-------LDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  90 TFFLmSPEKAQQAPHWMVPKTMHNDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILYHADgTVKGIQTGDMgigkd 169
Cdd:PRK10015  77 ISFL-TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGN-KVTGVQAGDD----- 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 170 gepthnftpgyELHAKYTIFAEGCRGHLGKRLiqqfNLDKDADPQHYGIGIKELWEIDPA--KHKPGLVMH-GAGWPLSE 246
Cdd:PRK10015 150 -----------ILEANVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEqiNDRFNITGEeGAAWLFAG 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 247 TGSSG---GWWLYhAENNQVTLGMIVDL------SYTNPHMypfmeMQRWKTHPLIKQYLEGGKRISYGARAVTKGGFNS 317
Cdd:PRK10015 215 SPSDGlmgGGFLY-TNKDSISLGLVCGLgdiahaQKSVPQM-----LEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 318 LPKFTFPGGSLIGDDAGF-LNFA-KIKGSHTAMKSGMLCGEAVFEAiaagvakggdlaiarvTEGEDFFVKELTAYTEKF 395
Cdd:PRK10015 289 VPQLVNDGVMIVGDAAGFcLNLGfTVRGMDLAIASAQAAATTVIAA----------------KERADFSASSLAQYKREL 352

                        410
                 ....*....|....*....
gi 491117510 396 NNSWLKEELYSARNFgPAM 414
Cdd:PRK10015 353 EQSCVMRDMQHFRKI-PAL 370
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-358 4.04e-07

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 51.94  E-value: 4.04e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   11 FDVVIVGAGPAGLSAAikiRQLAIENnlndLSVCVVEKGSEVGaHILSGAILEPRAINELfpnwkEEGAPLNVPVTEDKT 90
Cdd:TIGR02032   1 YDVVVVGAGPAGASAA---YRLADKG----LRVLLLEKKSFPR-YKPCGGALSPRALEEL-----DLPGELIVNLVRGAR 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   91 FFLMSPEKAQ----QAPHWMVPKtMHNDgnyvislgnvvRWLGQKAEElevsifpgfAASEILYHADGTVKGIQTGDMGI 166
Cdd:TIGR02032  68 FFSPNGDSVEipieTELAYVIDR-DAFD-----------EQLAERAQE---------AGAELRLGTRVLDVEIHDDRVVV 126

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  167 GKDGEpthnftpGYELHAKYTIFAEGCRGHLGKRliqqfnLDKDADPQHYGIGIKELWEI--DPAKHKPGLVMHGAGWpl 244
Cdd:TIGR02032 127 IVRGS-------EGTVTAKIVIGADGSRSIVAKK------LGLKKEPREYGVAARAEVEMpdEEVDEDFVEVYIDRGI-- 191

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  245 setgSSGG-WWLYHAENNQVTLGMIVDLSYTNPHMYPFMEmqRW-KTHPLIKQYLEGGkriSYGARAVTKGGFNSLPKft 322
Cdd:TIGR02032 192 ----VPGGyGWVFPKGDGTANVGVGSRSAEEGEDPKKYLK--DFlARRPELKDAETVE---VCGALIPIGRPDEKLVR-- 260

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 491117510  323 fPGGSLIGDDAGFLNFAKIKGSHTAMKSGMLCGEAV 358
Cdd:TIGR02032 261 -GNVLLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 11-76 2.93e-06

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 49.24  E-value: 2.93e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 491117510   11 FDVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEV--GAHILSGAILEPRAINELFPNWKE 76
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQ-------LGGKVTLIEDEGTCpyGGCVLSKALLGAAEAPEIASLWAD 61
sdhA PRK07803
succinate dehydrogenase flavoprotein subunit; Reviewed
 1-31 4.58e-04

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236101 [Multi-domain]  Cd Length: 626  Bit Score: 43.10  E-value: 4.58e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 491117510   1 MEHIEREsmEFDVVIVGAGPAGLSAAIKIRQ 31
Cdd:PRK07803   1 MTEVERH--SYDVVVIGAGGAGLRAAIEARE 29
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 466-568 8.72e-75

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 8.72e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  466 GKLTFDRLSSVFVSNTVHEENQPAHLKLTDTSIPVNVNLPKWDEPAQRYCPAGVYEIMENDD-GSKRFQINAANCVHCKT 544
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEpGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 491117510  545 CDIKDPSQNITWVTPEGGGGPNYP 568
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
18-373 3.88e-63

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 208.67  E-value: 3.88e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  18 AGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHILSGAILePRAINELFPnwKEEGAPLNVPVTEDKtFFLMSPE 97
Cdd:COG0644    1 AGPAGSAAARRLAR-------AGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP--LGLDEPLERPVRGAR-FYSPGGK 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  98 KAQQAPHWmvpktmhnDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILYHaDGTVKgIQTGDmgigkdgepthnft 177
Cdd:COG0644   70 SVELPPGR--------GGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-DGRVV-VRTGD-------------- 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 178 pGYELHAKYTIFAEGCRGHLGKRLIQQFNLDKdadPQHYGIGIKELWEIDPAKH-KPGLVMHGAGwplsETGSSGGWWLY 256
Cdd:COG0644  126 -GEEIRADYVVDADGARSLLARKLGLKRRSDE---PQDYALAIKEHWELPPLEGvDPGAVEFFFG----EGAPGGYGWVF 197

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 257 HAENNQVTLGmivdlsytnphmypfmemqrwkthplikqyleggkrISYGaravtkggfNSLPKFTFPGGSLIGDDAGFL 336
Cdd:COG0644  198 PLGDGRVSVG------------------------------------IPLG---------GPRPRLVGDGVLLVGDAAGFV 232

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 491117510 337 NFAKIKGSHTAMKSGMLCGEAVFEAIAAGVAKGGDLA 373
Cdd:COG0644  233 DPLTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEALA 269
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
476-570 2.71e-47

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 159.98  E-value: 2.71e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 476 VFVSNTVHEENQPaHLKLTDTSIPVNVNLpkwDEPAQRYCPAGVYEImendDGSKRFQINAANCVHCKTCDIKDPSQNIT 555
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEI----VGDGRLQINYENCLECGTCRIKCPTQNIT 72

                         90
                 ....*....|....*
gi 491117510 556 WVTPEGGGGPNYPNM 570
Cdd:COG2440   73 WVYPEGGGGVNYRFG 87
PRK10015 PRK10015
oxidoreductase; Provisional
 10-414 3.16e-29

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 120.08  E-value: 3.16e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  10 EFDVVIVGAGPAGLSAAIKIRQLAiennlndLSVCVVEKGSEVGAHILSGAILEPRAINELFPNWKEEgAPLNVPVTEDK 89
Cdd:PRK10015   5 KFDAIVVGAGVAGSVAALVMARAG-------LDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  90 TFFLmSPEKAQQAPHWMVPKTMHNDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILYHADgTVKGIQTGDMgigkd 169
Cdd:PRK10015  77 ISFL-TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGN-KVTGVQAGDD----- 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 170 gepthnftpgyELHAKYTIFAEGCRGHLGKRLiqqfNLDKDADPQHYGIGIKELWEIDPA--KHKPGLVMH-GAGWPLSE 246
Cdd:PRK10015 150 -----------ILEANVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEqiNDRFNITGEeGAAWLFAG 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 247 TGSSG---GWWLYhAENNQVTLGMIVDL------SYTNPHMypfmeMQRWKTHPLIKQYLEGGKRISYGARAVTKGGFNS 317
Cdd:PRK10015 215 SPSDGlmgGGFLY-TNKDSISLGLVCGLgdiahaQKSVPQM-----LEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 318 LPKFTFPGGSLIGDDAGF-LNFA-KIKGSHTAMKSGMLCGEAVFEAiaagvakggdlaiarvTEGEDFFVKELTAYTEKF 395
Cdd:PRK10015 289 VPQLVNDGVMIVGDAAGFcLNLGfTVRGMDLAIASAQAAATTVIAA----------------KERADFSASSLAQYKREL 352

                        410
                 ....*....|....*....
gi 491117510 396 NNSWLKEELYSARNFgPAM 414
Cdd:PRK10015 353 EQSCVMRDMQHFRKI-PAL 370
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 11-364 7.05e-23

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 101.53  E-value: 7.05e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  11 FDVVIVGAGPAGLSAAIkirQLAIENnlndLSVCVVEKGSEVGAHILSGAILEPRAINELFPNWKEEgAPLNVPVTEDKT 90
Cdd:PRK10157   6 FDAIIVGAGLAGSVAAL---VLAREG----AQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  91 FFlMSPEKAQQAPHWMVPKTMHNDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILyHADGTVKGIQTgdmgigkDG 170
Cdd:PRK10157  78 AF-MTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKVVGVEA-------DG 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 171 EPthnftpgyeLHAKYTIFAEGCRGHLGKRLiqqfNLDKDADPQHYGIGIKELWEIDPAKHKPGLVMHG--------AGW 242
Cdd:PRK10157 149 DV---------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGnqgaaclfAGS 215

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510 243 PLSetGSSGGWWLYHAENNqVTLGMIVDLSYTN------PHMypfmeMQRWKTHPLIKQYLEGGKRISYGARAVTKGGFN 316
Cdd:PRK10157 216 PTD--GLMGGGFLYTNENT-LSLGLVCGLHHLHdakksvPQM-----LEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGIN 287

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 491117510 317 SLPKFTFPGGSLIGDDAGF---LNFAkIKGSHTAMKSGMLCGEAVFEAIAA 364
Cdd:PRK10157 288 MLPELVGDGVLIAGDAAGMcmnLGFT-IRGMDLAIAAGEAAAKTVLSAMKS 337
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 9-59 2.37e-08

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 56.38  E-value: 2.37e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 491117510   9 MEFDVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAH-ILSG 59
Cdd:COG1053    2 HEYDVVVVGSGGAGLRAALEAAE-------AGLKVLVLEKVPPRGGHtAAAQ 46
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
7-84 1.86e-07

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 53.61  E-value: 1.86e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   7 ESMEFDVVIVGAGPAGLSAAikiRQLAIennLNDLSVCVVEKGSEVGAH-------ILSGAILEP---------RAINEL 70
Cdd:COG0579    1 MMEMYDVVIIGAGIVGLALA---RELSR---YEDLKVLVLEKEDDVAQEssgnnsgVIHAGLYYTpgslkarlcVEGNEL 74

                         90
                 ....*....|....
gi 491117510  71 FPNWKEEgapLNVP 84
Cdd:COG0579   75 FYELCRE---LGIP 85
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 8-53 1.94e-07

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 53.33  E-value: 1.94e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 491117510   8 SMEFDVVIVGAGPAGLSAAIKIRQLAIennlndlSVCVVEKGSEVG 53
Cdd:COG2072    4 TEHVDVVVIGAGQAGLAAAYHLRRAGI-------DFVVLEKADDVG 42
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-358 4.04e-07

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 51.94  E-value: 4.04e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   11 FDVVIVGAGPAGLSAAikiRQLAIENnlndLSVCVVEKGSEVGaHILSGAILEPRAINELfpnwkEEGAPLNVPVTEDKT 90
Cdd:TIGR02032   1 YDVVVVGAGPAGASAA---YRLADKG----LRVLLLEKKSFPR-YKPCGGALSPRALEEL-----DLPGELIVNLVRGAR 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   91 FFLMSPEKAQ----QAPHWMVPKtMHNDgnyvislgnvvRWLGQKAEElevsifpgfAASEILYHADGTVKGIQTGDMGI 166
Cdd:TIGR02032  68 FFSPNGDSVEipieTELAYVIDR-DAFD-----------EQLAERAQE---------AGAELRLGTRVLDVEIHDDRVVV 126

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  167 GKDGEpthnftpGYELHAKYTIFAEGCRGHLGKRliqqfnLDKDADPQHYGIGIKELWEI--DPAKHKPGLVMHGAGWpl 244
Cdd:TIGR02032 127 IVRGS-------EGTVTAKIVIGADGSRSIVAKK------LGLKKEPREYGVAARAEVEMpdEEVDEDFVEVYIDRGI-- 191

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  245 setgSSGG-WWLYHAENNQVTLGMIVDLSYTNPHMYPFMEmqRW-KTHPLIKQYLEGGkriSYGARAVTKGGFNSLPKft 322
Cdd:TIGR02032 192 ----VPGGyGWVFPKGDGTANVGVGSRSAEEGEDPKKYLK--DFlARRPELKDAETVE---VCGALIPIGRPDEKLVR-- 260

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 491117510  323 fPGGSLIGDDAGFLNFAKIKGSHTAMKSGMLCGEAV 358
Cdd:TIGR02032 261 -GNVLLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 8-49 2.51e-06

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 50.09  E-value: 2.51e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 491117510   8 SMEFDVVIVGAGPAGLSAAIKIRQLaiennlnDLSVCVVEKG 49
Cdd:COG1249    1 MKDYDLVVIGAGPGGYVAAIRAAQL-------GLKVALVEKG 35
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 11-76 2.93e-06

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 49.24  E-value: 2.93e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 491117510   11 FDVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEV--GAHILSGAILEPRAINELFPNWKE 76
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQ-------LGGKVTLIEDEGTCpyGGCVLSKALLGAAEAPEIASLWAD 61
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 8-198 3.36e-06

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 49.17  E-value: 3.36e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   8 SMEFDVVIVGAGPAGLSAAIkirQLAiennLNDLSVCVVEKGSEVGAHIlSGAILEPRAINELfpnwKEEG-----APLN 82
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALAL---ALA----RAGIRVTVVERAPPPRPDG-RGIALSPRSLELL----RRLGlwdrlLARG 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510  83 VPVTEDKTFFLMSPEKAQQAPHWMVPktmhNDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEILYHADG-TVKgiqt 161
Cdd:COG0654   69 APIRGIRVRDGSDGRVLARFDAAETG----LPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGvTVT---- 140

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 491117510 162 gdmgigkdgepthnFTPGYELHAKYTIFAEG----CRGHLG 198
Cdd:COG0654  141 --------------LADGRTLRADLVVGADGarsaVRRLLG 167
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
11-53 4.03e-06

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 48.96  E-value: 4.03e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 491117510  11 FDVVIVGAGPAGLSAAIkirQLAIENnlndLSVCVVEKGsEVG 53
Cdd:COG0492    1 YDVVIIGAGPAGLTAAI---YAARAG----LKTLVIEGG-EPG 35
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 12-56 4.18e-06

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 49.21  E-value: 4.18e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 491117510   12 DVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHI 56
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAE-------AGLKVAVVEKGQPFGGAT 38
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 9-53 1.40e-05

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 47.92  E-value: 1.40e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 491117510   9 MEFDVVIVGAGPAGLSAAIkirQLAiennLNDLSVCVVEKGSEVG 53
Cdd:COG1233    2 MMYDVVVIGAGIGGLAAAA---LLA----RAGYRVTVLEKNDTPG 39
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 9-49 1.68e-05

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 47.48  E-value: 1.68e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 491117510   9 MEFDVVIVGAGPAGLSAAIKIRQLAiennlndLSVCVVEKG 49
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAKLG-------KKVALIEKG 35
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 10-205 1.68e-05

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 47.32  E-value: 1.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   10 EFDVVIVGAGPAGLSAAIKIRQLAIennlndlSVCVVEKGSEvgAHILS-GAILEPRAInELFPN------WKEEGAPLN 82
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGV-------RVVLVERHAT--TSVLPrAHGLNQRTM-ELLRQagledrILAEGVPHE 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   83 VpvtedKTFFLMSP------EKAQQAPHW-MVPKTMhndgnyvislgnVVRWLGQKAEELEVSIFpgFAASEILYHADGT 155
Cdd:pfam01494  71 G-----MGLAFYNTrrradlDFLTSPPRVtVYPQTE------------LEPILVEHAEARGAQVR--FGTEVLSLEQDGD 131

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 491117510  156 -VKGIQTGdmgiGKDGEpthnftpGYELHAKYTIFAEGCRGHLGKRLIQQF 205
Cdd:pfam01494 132 gVTAVVRD----RRDGE-------EYTVRAKYLVGCDGGRSPVRKTLGIEF 171
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
8-52 3.61e-05

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 46.26  E-value: 3.61e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 491117510   8 SMEFDVVIVGAGPAGLSAAIKirqLAiennLNDLSVCVVEKGSEV 52
Cdd:COG2509   28 SLKYDVVIVGAGPAGLFAALE---LA----EAGLKPLVLERGKDV 65
PRK09126 PRK09126
FAD-dependent hydroxylase;
8-51 6.34e-05

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 45.32  E-value: 6.34e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 491117510   8 SMEFDVVIVGAGPAGLSAAikiRQLAIENnlndLSVCVVEKGSE 51
Cdd:PRK09126   1 MMHSDIVVVGAGPAGLSFA---RSLAGSG----LKVTLIERQPL 37
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 12-156 6.86e-05

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 45.08  E-value: 6.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   12 DVVIVGAGPAGLSAAikiRQLAiennLNDLSVCVVEKGSEVGAH-------ILSGAI--LEPRAI-------NELFPNWK 75
Cdd:pfam01266   1 DVVVIGGGIVGLSTA---YELA----RRGLSVTLLERGDDPGSGasgrnagLIHPGLryLEPSELarlaleaLDLWEELE 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   76 EEGAPlNVPVTEDKTFFLMSPEKAQQAPHWMvpktmhndgNYVISLGNVVRWLGQKAEELEVSIFPGFAASeILYHADGT 155
Cdd:pfam01266  74 EELGI-DCGFRRCGVLVLARDEEEEALEKLL---------AALRRLGVPAELLDAEELRELEPLLPGLRGG-LFYPDGGH 142


                  .
gi 491117510  156 V 156
Cdd:pfam01266 143 V 143
HI0933_like pfam03486
HI0933-like protein;
11-59 8.77e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 45.26  E-value: 8.77e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 491117510   11 FDVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHIL-SG 59
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAK-------RGRRVLLIEKGKKLGRKILiSG 43
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 12-53 9.16e-05

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 45.21  E-value: 9.16e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 491117510  12 DVVIVGAGPAGLSAAIKIRQLAIEnnlndlsVCVVEKGSEVG 53
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKAGHE-------VTVLEASDRVG 37
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
7-53 1.05e-04

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 44.76  E-value: 1.05e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 491117510   7 ESMEFDVVIVGAGPAGLSAAIkirQLAiennLNDLSVCVVEKGSEVG 53
Cdd:PRK05249   2 HMYDYDLVVIGSGPAGEGAAM---QAA----KLGKRVAVIERYRNVG 41
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
9-53 1.29e-04

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 44.48  E-value: 1.29e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 491117510   9 MEFDVVIVGAGPAGLSAAikiRQLAiennLNDLSVCVVEKGSEVG 53
Cdd:COG3380    2 SMPDIAIIGAGIAGLAAA---RALQ----DAGHEVTVFEKSRGVG 39
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 8-49 1.41e-04

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 44.37  E-value: 1.41e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 491117510   8 SMEFDVVIVGAGPAGLSAAIKIRQLaiennlnDLSVCVVEKG 49
Cdd:PRK06416   2 AFEYDVIVIGAGPGGYVAAIRAAQL-------GLKVAIVEKE 36
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
15-61 1.44e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 40.21  E-value: 1.44e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 491117510   15 IVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHILSGAI 61
Cdd:pfam13450   1 IVGAGLAGLVAAALLAK-------RGFRVLVLEKRDRLGGNAYSYRV 40
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 7-50 2.35e-04

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 43.94  E-value: 2.35e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 491117510   7 ESMEFDVVIVGAGPAGLSAAIKIRQLaiennlndLSVCVVEKGS 50
Cdd:COG0029    1 ERLKTDVLVIGSGIAGLSAALKLAER--------GRVTLLTKGE 36
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
1-77 2.66e-04

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 43.76  E-value: 2.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491117510   1 MEHIERESMEFDVVIVGAGPAGLSAAIKIRQLAiennlNDLSVCVVEKgsevgAHIL-SGAI---LEprAINE-LFPNWK 75
Cdd:PRK06854   2 MANPEVVEVDTDILIIGGGMAGCGAAFEAKEWA-----PDLKVLIVEK-----ANIKrSGAVaqgLS--AINAyIGEGET 69


                 ..
gi 491117510  76 EE 77
Cdd:PRK06854  70 PE 71
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 9-67 3.34e-04

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 42.46  E-value: 3.34e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 491117510    9 MEFDVVIVGAGPAGLSAAikiRQLAIEnnlNDLSVCVVEKGSEVGAHILSGAILEPRAI 67
Cdd:pfam01946  16 AESDVVIVGAGSSGLTAA---YYLAKN---RGLKVAIIERSVSPGGGAWLGGQLFSAMV 68
sdhA PRK07803
succinate dehydrogenase flavoprotein subunit; Reviewed
 1-31 4.58e-04

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236101 [Multi-domain]  Cd Length: 626  Bit Score: 43.10  E-value: 4.58e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 491117510   1 MEHIEREsmEFDVVIVGAGPAGLSAAIKIRQ 31
Cdd:PRK07803   1 MTEVERH--SYDVVVIGAGGAGLRAAIEARE 29
PLN02568 PLN02568
polyamine oxidase
 13-58 4.95e-04

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 42.89  E-value: 4.95e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 491117510  13 VVIVGAGPAGLSAAIKIRQLAIENnlNDLSVCVVEKGSEVGAHILS 58
Cdd:PLN02568   8 IVIIGAGMAGLTAANKLYTSSAAN--DMFELTVVEGGDRIGGRINT 51
GlpB COG3075
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
9-61 6.18e-04

Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 442309  Cd Length: 415  Bit Score: 42.47  E-value: 6.18e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 491117510   9 MEFDVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSevGA-HILSGAI 61
Cdd:COG3075    1 MKFDVVVIGGGLAGLTAAIRAAE-------AGLRVAIVSAGQ--SAlHFSSGSL 45
sdhA PRK06069
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
7-64 7.04e-04

succinate dehydrogenase/fumarate reductase flavoprotein subunit;


Pssm-ID: 235689 [Multi-domain]  Cd Length: 577  Bit Score: 42.35  E-value: 7.04e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 491117510   7 ESMEFDVVIVGAGPAGLSAAIKirqlAIENNLNDLSVCVVEKGSEVGAHILS-----GAILEP 64
Cdd:PRK06069   2 EVLKYDVVIVGSGLAGLRAAVA----AAERSGGKLSVAVVSKTQPMRSHSVSaeggtAAVLYP 60
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
9-61 8.00e-04

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 42.14  E-value: 8.00e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 491117510   9 MEFDVVIVGAGPAGLSAAIKIRQLaiennlnDLSVCVVEKGSevGA-HILSGAI 61
Cdd:PRK05329   1 MKFDVLVIGGGLAGLTAALAAAEA-------GKRVALVAKGQ--GAlHFSSGSI 45
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
1-67 8.17e-04

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 42.20  E-value: 8.17e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 491117510   1 MEHIERESMEFDVVIVGAGPAGLSAAIkirQLAIEnnlnDLSVCVVEKgsevgahiLSGAILEPRAI 67
Cdd:PRK06183   1 MAAQHPDAHDTDVVIVGAGPVGLTLAN---LLGQY----GVRVLVLER--------WPTLYDLPRAV 52
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
14-59 9.07e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 41.96  E-value: 9.07e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 491117510  14 VIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVGAHIL-SG 59
Cdd:COG2081    1 IVIGAGAAGLMAAITAAE-------RGARVLLLEKNPKVGRKILiSG 40
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
9-49 1.09e-03

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 41.43  E-value: 1.09e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 491117510   9 MEFDVVIVGAGPAGLSAAikiRQLAiennLNDLSVCVVEKG 49
Cdd:COG0665    1 ATADVVVIGGGIAGLSTA---YHLA----RRGLDVTVLERG 34
PRK07208 PRK07208
hypothetical protein; Provisional
 12-53 2.14e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 40.64  E-value: 2.14e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 491117510  12 DVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVG 53
Cdd:PRK07208   6 SVVIIGAGPAGLTAAYELLK-------RGYPVTVLEADPVVG 40
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 8-49 2.65e-03

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 40.58  E-value: 2.65e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 491117510   8 SMEFDVVIVGAGPAGLSAAikiRQLAiENnlNDLSVCVVEKG 49
Cdd:COG2303    2 LEEYDYVIVGAGSAGCVLA---NRLS-ED--AGLRVLLLEAG 37
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
12-54 2.71e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 40.32  E-value: 2.71e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 491117510  12 DVVIVGAGPAGLSAAIKIRQLAIEnnlnDLSVCVVEKGSEVGA 54
Cdd:COG4529    7 RIAIIGGGASGTALAIHLLRRAPE----PLRITLFEPRPELGR 45
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
4-58 2.97e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 40.29  E-value: 2.97e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 491117510   4 IERESMEFDVVIVGAGPAGLSAAIKIRQLaiennlnDLSVCVVEKGSEVGAHILS 58
Cdd:COG1231    1 MSRRARGKDVVIVGAGLAGLAAARELRKA-------GLDVTVLEARDRVGGRVWT 48
PRK12843 PRK12843
FAD-dependent oxidoreductase;
5-53 4.44e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 39.72  E-value: 4.44e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 491117510   5 ERESMEFDVVIVGAGPAGLSAAIKIRQLAiennlndLSVCVVEKGSEVG 53
Cdd:PRK12843  11 ERWDAEFDVIVIGAGAAGMSAALFAAIAG-------LKVLLVERTEYVG 52
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 12-53 4.77e-03

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 39.51  E-value: 4.77e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 491117510   12 DVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVG 53
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAAR-------AGAKVLLVERRGFLG 35
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
10-53 4.78e-03

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 39.63  E-value: 4.78e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 491117510  10 EFDVVIVGAGPAGLSAAIKIRQlaiennlNDLSVCVVEKGSEVG 53
Cdd:PRK07843   7 EYDVVVVGSGAAGMVAALTAAH-------RGLSTVVVEKAPHYG 43
Fer4_7 pfam12838
4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to ...
 512-545 5.79e-03

4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.


Pssm-ID: 463724 [Multi-domain]  Cd Length: 51  Bit Score: 35.19  E-value: 5.79e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 491117510  512 QRYCPAGVYEIME--NDDGSKRFQINAANCVHCKTC 545
Cdd:pfam12838   8 VAACPVGAITLDEvgEKKGTKTVVIDPERCVGCGAC 43
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 11-27 6.46e-03

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 39.37  E-value: 6.46e-03
                         10
                 ....*....|....*..
gi 491117510  11 FDVVIVGAGPAGLSAAI 27
Cdd:PRK15317 212 YDVLVVGGGPAGAAAAI 228
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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