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Conserved domains on  [gi|491224520|ref|WP_005082808|]
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sensor domain-containing protein [Mycobacteroides abscessus]

Protein Classification

sensor domain-containing protein( domain architecture ID 10623922)

sensor domain-containing protein of unknown function similar to the extracellular domain of Mycobacterium PknH

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PknH_C pfam14032
PknH-like extracellular domain; This domain is functionally uncharacterized. It is found as ...
43-223 1.71e-31

PknH-like extracellular domain; This domain is functionally uncharacterized. It is found as the periplasmic domain of the bacterial protein kinase PknH. The domain is also found in isolation in numerous proteins, for example the lipoproteins lpqQ, lprH, lppH and lpqA from M. tuberculosis. This family of proteins is found in bacteria. Proteins in this family are typically between 214 and 268 amino acids in length. There are two completely conserved C residues that are likely to form a disulphide bond. A second pair of cysteines are less well conserved probably form a second disulphide bond. It seems likely that this domain functions to bind some as yet unknown ligand.


:

Pssm-ID: 433660  Cd Length: 188  Bit Score: 113.67  E-value: 1.71e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491224520   43 GKLGGRLLPAEEVRAVTGLPRLL---KVWDPVDSMFGSTDPslECGLGYSLAEVVQY--SGYSAARIEGYsQETEEVREY 117
Cdd:pfam14032   4 AALGGLLLTPAEVAAIVGAPDMSvteELTTPPDDSGSVDPP--ECLGAAGAGQPSVYagSGWTAVRGQTL-SDPGDDGAH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491224520  118 SVSDALVVFADADAAQREFRSFAGRMSKCDGVT-TQKRPHEDADFWKLSITSADtaDEVAWTRSVIGST--WACYMAARQ 194
Cdd:pfam14032  81 LVGQAVVAFPSADAAQAFFDSLVAQWRGCAGQTtTTTDPDGPTYDWTVGDVSAD--DGVLTATVTQEGGdgWRCQRALAV 158
                         170       180       190
                  ....*....|....*....|....*....|
gi 491224520  195 RANFVASSMFC-SHGSDNKAGDVLDRLMQK 223
Cdd:pfam14032 159 RNNVVVDVAVCgFGNGGDAAVEIADAIADK 188
 
Name Accession Description Interval E-value
PknH_C pfam14032
PknH-like extracellular domain; This domain is functionally uncharacterized. It is found as ...
43-223 1.71e-31

PknH-like extracellular domain; This domain is functionally uncharacterized. It is found as the periplasmic domain of the bacterial protein kinase PknH. The domain is also found in isolation in numerous proteins, for example the lipoproteins lpqQ, lprH, lppH and lpqA from M. tuberculosis. This family of proteins is found in bacteria. Proteins in this family are typically between 214 and 268 amino acids in length. There are two completely conserved C residues that are likely to form a disulphide bond. A second pair of cysteines are less well conserved probably form a second disulphide bond. It seems likely that this domain functions to bind some as yet unknown ligand.


Pssm-ID: 433660  Cd Length: 188  Bit Score: 113.67  E-value: 1.71e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491224520   43 GKLGGRLLPAEEVRAVTGLPRLL---KVWDPVDSMFGSTDPslECGLGYSLAEVVQY--SGYSAARIEGYsQETEEVREY 117
Cdd:pfam14032   4 AALGGLLLTPAEVAAIVGAPDMSvteELTTPPDDSGSVDPP--ECLGAAGAGQPSVYagSGWTAVRGQTL-SDPGDDGAH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491224520  118 SVSDALVVFADADAAQREFRSFAGRMSKCDGVT-TQKRPHEDADFWKLSITSADtaDEVAWTRSVIGST--WACYMAARQ 194
Cdd:pfam14032  81 LVGQAVVAFPSADAAQAFFDSLVAQWRGCAGQTtTTTDPDGPTYDWTVGDVSAD--DGVLTATVTQEGGdgWRCQRALAV 158
                         170       180       190
                  ....*....|....*....|....*....|
gi 491224520  195 RANFVASSMFC-SHGSDNKAGDVLDRLMQK 223
Cdd:pfam14032 159 RNNVVVDVAVCgFGNGGDAAVEIADAIADK 188
 
Name Accession Description Interval E-value
PknH_C pfam14032
PknH-like extracellular domain; This domain is functionally uncharacterized. It is found as ...
43-223 1.71e-31

PknH-like extracellular domain; This domain is functionally uncharacterized. It is found as the periplasmic domain of the bacterial protein kinase PknH. The domain is also found in isolation in numerous proteins, for example the lipoproteins lpqQ, lprH, lppH and lpqA from M. tuberculosis. This family of proteins is found in bacteria. Proteins in this family are typically between 214 and 268 amino acids in length. There are two completely conserved C residues that are likely to form a disulphide bond. A second pair of cysteines are less well conserved probably form a second disulphide bond. It seems likely that this domain functions to bind some as yet unknown ligand.


Pssm-ID: 433660  Cd Length: 188  Bit Score: 113.67  E-value: 1.71e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491224520   43 GKLGGRLLPAEEVRAVTGLPRLL---KVWDPVDSMFGSTDPslECGLGYSLAEVVQY--SGYSAARIEGYsQETEEVREY 117
Cdd:pfam14032   4 AALGGLLLTPAEVAAIVGAPDMSvteELTTPPDDSGSVDPP--ECLGAAGAGQPSVYagSGWTAVRGQTL-SDPGDDGAH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491224520  118 SVSDALVVFADADAAQREFRSFAGRMSKCDGVT-TQKRPHEDADFWKLSITSADtaDEVAWTRSVIGST--WACYMAARQ 194
Cdd:pfam14032  81 LVGQAVVAFPSADAAQAFFDSLVAQWRGCAGQTtTTTDPDGPTYDWTVGDVSAD--DGVLTATVTQEGGdgWRCQRALAV 158
                         170       180       190
                  ....*....|....*....|....*....|
gi 491224520  195 RANFVASSMFC-SHGSDNKAGDVLDRLMQK 223
Cdd:pfam14032 159 RNNVVVDVAVCgFGNGGDAAVEIADAIADK 188
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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