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Conserved domains on  [gi|491623624|ref|WP_005481164|]
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MULTISPECIES: F0F1 ATP synthase subunit delta [Vibrio]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-177 7.63e-85

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 247.39  E-value: 7.63e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   1 MSDLTTIARPYAKAAFDFAVDKGQLDQWGQMLSFAAEVAKNEQMNELLTSSFSAEKMAEIFVAVCGEQVDAHGQNLLKVM 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  81 AENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVI 160
Cdd:PRK05758  81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*..
gi 491623624 161 DDSARGRLNRLSDALQS 177
Cdd:PRK05758 161 DGSVRGKLERLKDALKS 177
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-177 7.63e-85

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 247.39  E-value: 7.63e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   1 MSDLTTIARPYAKAAFDFAVDKGQLDQWGQMLSFAAEVAKNEQMNELLTSSFSAEKMAEIFVAVCGEQVDAHGQNLLKVM 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  81 AENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVI 160
Cdd:PRK05758  81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*..
gi 491623624 161 DDSARGRLNRLSDALQS 177
Cdd:PRK05758 161 DGSVRGKLERLKDALKS 177
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-175 5.81e-72

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 214.48  E-value: 5.81e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624    7 IARPYAKAAFDFAVDKGQLDQWGQMLSFAAEVAKN-EQMNELLTS-SFSAEKMAEIFVAVCGEQVDAHGQNLLKVMAENG 84
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNnKELKKFLSNpLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   85 RLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLER-KVKLNCSVDETLLGGVIIRAGDLVIDDS 163
Cdd:TIGR01145  81 RLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAaKVKLNCKVDKDLIGGVIIRIGDRVIDGS 160

                         170
                  ....*....|..
gi 491623624  164 ARGRLNRLSDAL 175
Cdd:TIGR01145 161 VRGQLKRLSRQL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-177 3.84e-67

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 202.31  E-value: 3.84e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   1 MSdLTTIARPYAKAAFDFAVDKGQLDQWGQML-SFAAEVAKNEQMNELLTS-SFSAEKMAEIFVAVCGEQVDAHGQNLLK 78
Cdd:COG0712    1 MA-LSTIARRYAKALFELAKEKGALDEVEEELfALAALLAENPELRALLSSpVISAEEKKELLEALFGGKLSPETLNFLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  79 VMAENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDL 158
Cdd:COG0712   80 LLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDK 159

                        170
                 ....*....|....*....
gi 491623624 159 VIDDSARGRLNRLSDALQS 177
Cdd:COG0712  160 VIDGSVRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-175 1.03e-60

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 185.80  E-value: 1.03e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624    7 IARPYAKAAFDFAVDKGQLDQWGQML-SFAAEVAKNEQMNELLTS-SFSAEKMAEIFVAVCGEQVDAHGQNLLKVMAENG 84
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELeALEAALAENPDLAAFLSNpTISAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   85 RLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLER-KVKLNCSVDETLLGGVIIRAGDLVIDDS 163
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 491623624  164 ARGRLNRLSDAL 175
Cdd:pfam00213 161 VKGKLERLKRAL 172
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-177 7.63e-85

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 247.39  E-value: 7.63e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   1 MSDLTTIARPYAKAAFDFAVDKGQLDQWGQMLSFAAEVAKNEQMNELLTSSFSAEKMAEIFVAVCGEQVDAHGQNLLKVM 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  81 AENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVI 160
Cdd:PRK05758  81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*..
gi 491623624 161 DDSARGRLNRLSDALQS 177
Cdd:PRK05758 161 DGSVRGKLERLKDALKS 177
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-175 5.81e-72

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 214.48  E-value: 5.81e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624    7 IARPYAKAAFDFAVDKGQLDQWGQMLSFAAEVAKN-EQMNELLTS-SFSAEKMAEIFVAVCGEQVDAHGQNLLKVMAENG 84
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNnKELKKFLSNpLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   85 RLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLER-KVKLNCSVDETLLGGVIIRAGDLVIDDS 163
Cdd:TIGR01145  81 RLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAaKVKLNCKVDKDLIGGVIIRIGDRVIDGS 160

                         170
                  ....*....|..
gi 491623624  164 ARGRLNRLSDAL 175
Cdd:TIGR01145 161 VRGQLKRLSRQL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-177 3.84e-67

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 202.31  E-value: 3.84e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   1 MSdLTTIARPYAKAAFDFAVDKGQLDQWGQML-SFAAEVAKNEQMNELLTS-SFSAEKMAEIFVAVCGEQVDAHGQNLLK 78
Cdd:COG0712    1 MA-LSTIARRYAKALFELAKEKGALDEVEEELfALAALLAENPELRALLSSpVISAEEKKELLEALFGGKLSPETLNFLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  79 VMAENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDL 158
Cdd:COG0712   80 LLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDK 159

                        170
                 ....*....|....*....
gi 491623624 159 VIDDSARGRLNRLSDALQS 177
Cdd:COG0712  160 VIDGSVRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-175 1.03e-60

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 185.80  E-value: 1.03e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624    7 IARPYAKAAFDFAVDKGQLDQWGQML-SFAAEVAKNEQMNELLTS-SFSAEKMAEIFVAVCGEQVDAHGQNLLKVMAENG 84
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELeALEAALAENPDLAAFLSNpTISAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   85 RLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLER-KVKLNCSVDETLLGGVIIRAGDLVIDDS 163
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 491623624  164 ARGRLNRLSDAL 175
Cdd:pfam00213 161 VKGKLERLKRAL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 4-176 3.78e-36

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 123.78  E-value: 3.78e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   4 LTTIARPYAKAAFDFAVDKGQLDQWGQML-SFAAEVAKNEQMNELLTS-SFSAEKMAEIFVAVCG-EQVDAHGQNLLKVM 80
Cdd:PRK13429   3 LNAIARRYAKALFQLAKEKGQLDSVYEELkQLAELLEDSPELRDALSNpVLSAEEKKAVLEKLLGkLKVSPEVLNFLKLL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  81 AENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVI 160
Cdd:PRK13429  83 ADRRRLGILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTGKKVELDTAVDPSLIGGVVVKIGDKVL 162

                        170
                 ....*....|....*.
gi 491623624 161 DDSARGRLNRLSDALQ 176
Cdd:PRK13429 163 DASVRTQLRRLKETLK 178
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 7-175 3.21e-20

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 82.73  E-value: 3.21e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   7 IARPYAKAAFDFAVDKGQLDQWGQ----MLSFAAEVakNEQMNELLTSSFSAEKMAEIFVAVCGEQVDAHGQNLLKVMAE 82
Cdd:CHL00119   8 IAQPYAEALLEFAKEKNIMEQITAdiqlILTFLNES--PELKKFLANPLISKNAKKEVIKKTFGSQINENTLKFLMVLVD 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  83 NGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLE-RKVKLNCSVDETLLGGVIIRAGDLVID 161
Cdd:CHL00119  86 RGRIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNaKEIKLVITVDPSLIGGFLIKIGSKVID 165

                        170
                 ....*....|....
gi 491623624 162 DSARGRLNRLSDAL 175
Cdd:CHL00119 166 TSIKGQLKQLASHL 179
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 4-172 3.47e-14

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 66.70  E-value: 3.47e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   4 LTTIARPYAKAAFDFAVDKGQLDQWGQMLSFAAEV---AKNEQMNELLTSSFSAEKMAEIFVAVcGEQVDAHGQNLLKVM 80
Cdd:PRK13441   3 YSAIASKYARALLNVAIELEKEEEYGEFLDLVCQIyesAKEFFDNPIVKPEKKVSLIKEIMKEF-GQEMDEFFENFLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  81 AENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVI 160
Cdd:PRK13441  82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEETIDESLIAGAVVEFEGKRL 161

                        170
                 ....*....|..
gi 491623624 161 DDSARGRLNRLS 172
Cdd:PRK13441 162 DVTVQGRLKKIA 173
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 1-145 1.56e-13

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 65.00  E-value: 1.56e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624   1 MSDLttIARPYAKAAFDfAVDKGQLDQWGQMLSFAAEVAKNEQMNELLTSSF-SAEKMAEIFVAVCGEQvDAHGQNLLKV 79
Cdd:PRK08474   1 MEEL--IAKRYAKALLS-SLSSDELNDIYSNLKILSSAFADEKFKEIISSPEiSKEQKIEFLLSFVDNA-NAKFQNFIKL 76

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 491623624  80 MAENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDE 145
Cdd:PRK08474  77 LAENKRLELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLKQKKSD 142
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 102-177 4.05e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 65.35  E-value: 4.05e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 491623624 102 EHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVIDDSARGRLNRLSDALQS 177
Cdd:PRK13430 196 ARRGRSVATVTTAVPLSDEQKQRLAAALSRIYGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAGRLERLRRRLAG 271
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 11-171 5.19e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 63.53  E-value: 5.19e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  11 YAKAAFDFAVDKGQLDQWGQMLSFAAEV-AKNEQMNELLTSSFSAEKMA-----EIFVAvcgeQVDAHGQNLLKVMAENG 84
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEIlKNNKDLIKLLTSYFIDKEEKfkiidKIFSA----KIDIYLVNFLKILAKNN 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  85 RLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVIDDSA 164
Cdd:PRK13436  87 LFIYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLVNKIDPKLIAGIKIKVDNKVFENSI 166


                 ....*..
gi 491623624 165 RGRLNRL 171
Cdd:PRK13436 167 KSKLKEL 173
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 75-175 2.13e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 56.87  E-value: 2.13e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491623624  75 NLLKVMAENGRLAALPDVCEQFFILKKEHEKEIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIR 154
Cdd:PRK13434  73 NFLGVLLNKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFKSEFILEVSEDKNLLGGFVVQ 152

                         90       100
                 ....*....|....*....|.
gi 491623624 155 AGDLVIDDSARGRLNRLSDAL 175
Cdd:PRK13434 153 FNDLKIEKSIASQLGEIKKAM 173
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 106-168 4.82e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 42.80  E-value: 4.82e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 491623624 106 EIDVEVISASELSDEQLANIGSKLEARLERKVKLNCSVDETLLGGVIIRAGDLVIDDSARGRL 168
Cdd:PRK13428 374 EVVAQVSAAAELSDAQRTRLTEVLSRIYGRPVSVQLHIDPELLGGLSIAVGDEVIDGTLSSRL 436
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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