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Conserved domains on  [gi|491641871|ref|WP_005499399|]
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glutathione-dependent disulfide-bond oxidoreductase [Vibrio parahaemolyticus]

Protein Classification

thiol:disulfide oxidoreductase( domain architecture ID 11485490)

thiol:disulfide oxidoreductase is a glutathione S-transferase family protein similar to the disulfide-bond oxidoreducatase YghU

Gene Ontology:  GO:0016740

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11752 PRK11752
putative S-transferase; Provisional
1-263 0e+00

putative S-transferase; Provisional


:

Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 590.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871   1 MANEYTPPRVWTNDSENGGQWASINRPDSGARHEQELPVGEHPFQLYSMGTPNGQKVTIMFEELLAAGVKEAEYDAYLIK 80
Cdd:PRK11752   2 TDNTYQPPKVWTWDKSNGGAFANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLIR 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  81 IGDGDQFGSGFVAVNPNSKIPALVDRSGDEPINVFESGNILFYLAEKFGHFLPTEGAKRAEVMNWLFWLQGSAPYLGGGF 160
Cdd:PRK11752  82 IGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGGF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 161 GHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGNLVLGRAYDAAEFLDVESYKNVVR 240
Cdd:PRK11752 162 GHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQR 241
                        250       260
                 ....*....|....*....|...
gi 491641871 241 WAKAIDEREGVKRGRIVNRSWGE 263
Cdd:PRK11752 242 WAKEIAERPAVKRGRIVNRTWGE 264
 
Name Accession Description Interval E-value
PRK11752 PRK11752
putative S-transferase; Provisional
1-263 0e+00

putative S-transferase; Provisional


Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 590.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871   1 MANEYTPPRVWTNDSENGGQWASINRPDSGARHEQELPVGEHPFQLYSMGTPNGQKVTIMFEELLAAGVKEAEYDAYLIK 80
Cdd:PRK11752   2 TDNTYQPPKVWTWDKSNGGAFANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLIR 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  81 IGDGDQFGSGFVAVNPNSKIPALVDRSGDEPINVFESGNILFYLAEKFGHFLPTEGAKRAEVMNWLFWLQGSAPYLGGGF 160
Cdd:PRK11752  82 IGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGGF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 161 GHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGNLVLGRAYDAAEFLDVESYKNVVR 240
Cdd:PRK11752 162 GHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQR 241
                        250       260
                 ....*....|....*....|...
gi 491641871 241 WAKAIDEREGVKRGRIVNRSWGE 263
Cdd:PRK11752 242 WAKEIAERPAVKRGRIVNRTWGE 264
GST_C_YghU_like cd10292
C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and ...
138-255 5.60e-75

C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YghU-like subfamily; composed of the Escherichia coli YghU and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YghU is one of nine GST homologs in the genome of Escherichia coli. It is similar to Escherichia coli YfcG in that it has poor GSH transferase activity towards typical substrates. It shows modest reductase activity towards some organic hydroperoxides. Like YfcG, YghU also shows good disulfide bond oxidoreductase activity comparable to the activities of glutaredoxins and thioredoxins. YghU does not contain a redox active cysteine residue, and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YghU reveals two GSH molecules bound in its active site.


Pssm-ID: 198325 [Multi-domain]  Cd Length: 118  Bit Score: 224.65  E-value: 5.60e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 138 KRAEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGN 217
Cdd:cd10292    1 KRTETLNWLFWQMGSAPYLGGGFGHFYSYAPVKIEYAIDRFTMEAKRQLDVLDRQLATHKYLAGDEYTIADMAIWPWYGG 80
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 491641871 218 LVLGRAYDAAEFLDVESYKNVVRWAKAIDEREGVKRGR 255
Cdd:cd10292   81 LALGSLYDAAEFLDVDEYKHVQRWAKDIAARPAVKRGR 118
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
45-261 7.09e-52

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 168.54  E-value: 7.09e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  45 QLYSMGT-PNGQKVTIMFEEllaagvKEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsGDEPInvFESGNILFY 123
Cdd:COG0625    3 KLYGSPPsPNSRRVRIALEE------KGLPYELVPVDLAKGEQKSPEFLALNPLGKVPVLVD--DGLVL--TESLAILEY 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 124 LAEKFGH--FLPTEGAKRAEVMNWLFWLQGSAPYLGGGFghFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGG 201
Cdd:COG0625   73 LAERYPEppLLPADPAARARVRQWLAWADGDLHPALRNL--LERLAPEKDPAAIARARAELARLLAVLEARLAGGPYLAG 150
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 202 DEYSIADIATWPWYGNLvlgraydAAEFLDVESYKNVVRWAKAIDEREGVKRGRIVNRSW 261
Cdd:COG0625  151 DRFSIADIALAPVLRRL-------DRLGLDLADYPNLAAWLARLAARPAFQRALAAAEPD 203
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
181-249 2.09e-07

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 48.05  E-value: 2.09e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 491641871  181 EVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWygnlvLGRAYDAAEFLDVESYKNVVRWAKAIDERE 249
Cdd:pfam00043  30 KVARVLSALEEVLKGQTYLVGDKLTLADIALAPA-----LLWLYELDPACLREKFPNLKAWFERVAARP 93
 
Name Accession Description Interval E-value
PRK11752 PRK11752
putative S-transferase; Provisional
1-263 0e+00

putative S-transferase; Provisional


Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 590.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871   1 MANEYTPPRVWTNDSENGGQWASINRPDSGARHEQELPVGEHPFQLYSMGTPNGQKVTIMFEELLAAGVKEAEYDAYLIK 80
Cdd:PRK11752   2 TDNTYQPPKVWTWDKSNGGAFANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLIR 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  81 IGDGDQFGSGFVAVNPNSKIPALVDRSGDEPINVFESGNILFYLAEKFGHFLPTEGAKRAEVMNWLFWLQGSAPYLGGGF 160
Cdd:PRK11752  82 IGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGGF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 161 GHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGNLVLGRAYDAAEFLDVESYKNVVR 240
Cdd:PRK11752 162 GHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQR 241
                        250       260
                 ....*....|....*....|...
gi 491641871 241 WAKAIDEREGVKRGRIVNRSWGE 263
Cdd:PRK11752 242 WAKEIAERPAVKRGRIVNRTWGE 264
GST_C_YghU_like cd10292
C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and ...
138-255 5.60e-75

C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YghU-like subfamily; composed of the Escherichia coli YghU and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YghU is one of nine GST homologs in the genome of Escherichia coli. It is similar to Escherichia coli YfcG in that it has poor GSH transferase activity towards typical substrates. It shows modest reductase activity towards some organic hydroperoxides. Like YfcG, YghU also shows good disulfide bond oxidoreductase activity comparable to the activities of glutaredoxins and thioredoxins. YghU does not contain a redox active cysteine residue, and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YghU reveals two GSH molecules bound in its active site.


Pssm-ID: 198325 [Multi-domain]  Cd Length: 118  Bit Score: 224.65  E-value: 5.60e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 138 KRAEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGN 217
Cdd:cd10292    1 KRTETLNWLFWQMGSAPYLGGGFGHFYSYAPVKIEYAIDRFTMEAKRQLDVLDRQLATHKYLAGDEYTIADMAIWPWYGG 80
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 491641871 218 LVLGRAYDAAEFLDVESYKNVVRWAKAIDEREGVKRGR 255
Cdd:cd10292   81 LALGSLYDAAEFLDVDEYKHVQRWAKDIAARPAVKRGR 118
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
45-261 7.09e-52

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 168.54  E-value: 7.09e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  45 QLYSMGT-PNGQKVTIMFEEllaagvKEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsGDEPInvFESGNILFY 123
Cdd:COG0625    3 KLYGSPPsPNSRRVRIALEE------KGLPYELVPVDLAKGEQKSPEFLALNPLGKVPVLVD--DGLVL--TESLAILEY 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 124 LAEKFGH--FLPTEGAKRAEVMNWLFWLQGSAPYLGGGFghFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGG 201
Cdd:COG0625   73 LAERYPEppLLPADPAARARVRQWLAWADGDLHPALRNL--LERLAPEKDPAAIARARAELARLLAVLEARLAGGPYLAG 150
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 202 DEYSIADIATWPWYGNLvlgraydAAEFLDVESYKNVVRWAKAIDEREGVKRGRIVNRSW 261
Cdd:COG0625  151 DRFSIADIALAPVLRRL-------DRLGLDLADYPNLAAWLARLAARPAFQRALAAAEPD 203
PRK13972 PRK13972
GSH-dependent disulfide bond oxidoreductase; Provisional
46-248 6.36e-45

GSH-dependent disulfide bond oxidoreductase; Provisional


Pssm-ID: 172475 [Multi-domain]  Cd Length: 215  Bit Score: 151.38  E-value: 6.36e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  46 LYSMGTPNGQKVTIMFEEllaAGVkeaEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDRS---GDEPINVFESGNILF 122
Cdd:PRK13972   4 LYFAPTPNGHKITLFLEE---AEL---DYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSpadGGEPLSLFESGAILL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 123 YLAEKFGHFLPTEGAKRAEVMNWLFW-LQGSAPYLGGGFgHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGG 201
Cdd:PRK13972  78 YLAEKTGLFLSHETRERAATLQWLFWqVGGLGPMLGQNH-HFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGG 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 491641871 202 DEYSIADIATWPWYGNLVLGRaydaaefLDVESYKNVVRWAKAIDER 248
Cdd:PRK13972 157 ENYSIADIACWPWVNAWTRQR-------IDLAMYPAVKNWHERIRSR 196
GST_C_Ure2p_like cd03178
C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; ...
138-253 2.31e-40

C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; Glutathione S-transferase (GST) C-terminal domain family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p, YfcG and YghU from Escherichia coli, and related GST-like proteins. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. YfcG and YghU are two of the nine GST homologs in the genome of Escherichia coli. They display very low or no GSH transferase, but show very good disulfide bond oxidoreductase activity. YghU also shows modest organic hydroperoxide reductase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198288 [Multi-domain]  Cd Length: 110  Bit Score: 135.84  E-value: 2.31e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 138 KRAEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGN 217
Cdd:cd03178    1 ERAEVLQWLFFQMSGLGPMFGQAGHFLYFAPEKIPYAIERYTDEVKRLYGVLDKRLSDRPYLAGEEYSIADIALYPWTHY 80
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 491641871 218 LVLGRaydaaeFLDVESYKNVVRWAKAIDEREGVKR 253
Cdd:cd03178   81 ADLGG------FADLSEYPNVKRWLERIAARPAVQK 110
GST_C_YfcG_like cd10291
C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and ...
138-254 2.29e-35

C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YfcG-like subfamily; composed of the Escherichia coli YfcG and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YfcG is one of nine GST homologs in Escherichia coli. It is expressed predominantly during the late stationary phase where the predominant form of GSH is glutathionylspermidine (GspSH), suggesting that YfcG might interact with GspSH. It has very low or no GSH transferase or peroxidase activity, but displays a unique disulfide bond reductase activity that is comparable to thioredoxins (TRXs) and glutaredoxins (GRXs). However, unlike TRXs and GRXs, YfcG does not contain a redox active cysteine residue and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YcfG reveals a bound GSSG molecule in its active site. The actual physiological substrates for YfcG are yet to be identified.


Pssm-ID: 198324 [Multi-domain]  Cd Length: 110  Bit Score: 123.15  E-value: 2.29e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 138 KRAEVMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYgn 217
Cdd:cd10291    1 ERYAVLQWLMWQMGGLGPMQGQAHHFKRYAPEKIPYAIKRYTNETKRLYGVLDRRLAKSKYLAGDEYSIADIAIWPWV-- 78
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 491641871 218 lvlgRAYDAAEfLDVESYKNVVRWAKAIDEREGVKRG 254
Cdd:cd10291   79 ----ARHEWQG-IDLADFPNLKRWFERLAARPAVQKG 110
GST_N_Ure2p_like cd03048
GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related ...
43-129 8.82e-35

GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and Schizosaccharomyces pombe GST-I. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes.


Pssm-ID: 239346 [Multi-domain]  Cd Length: 81  Bit Score: 120.73  E-value: 8.82e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  43 PFQLYSMGTPNGQKVTIMFEELlaagvkEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDRSGdEPINVFESGNILF 122
Cdd:cd03048    1 MITLYTHGTPNGFKVSIMLEEL------GLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNG-TPLTVFESGAILL 73

                 ....*..
gi 491641871 123 YLAEKFG 129
Cdd:cd03048   74 YLAEKYD 80
GST_C_Ure2p cd10293
C-terminal, alpha helical domain of fungal Ure2p Glutathione S-transferases; Glutathione ...
140-254 1.36e-13

C-terminal, alpha helical domain of fungal Ure2p Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Ure2p subfamily; composed of the Saccharomyces cerevisiae Ure2p and related fungal proteins. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198326 [Multi-domain]  Cd Length: 117  Bit Score: 65.91  E-value: 1.36e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 140 AEVMNWLFW-LQGSAPYLGGgFGHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLAN--NAFLGGDEYSIADIATWPWyg 216
Cdd:cd10293    3 YQAKQWLFFqASGQGPYWGQ-AGWFNVFHAEKVPSAIERYTNEIRRVLGVLETALAEryRVWLVGDKFTIADLAFVPW-- 79
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 491641871 217 NLVLGRAYDAAEFLDVESYKNVVRWAKAIDEREGVKRG 254
Cdd:cd10293   80 NNVVDMIFIDPELDIKKEFPHVYKWLKRMLARPAVKKA 117
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
60-129 3.75e-09

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 52.50  E-value: 3.75e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  60 MFEELlaagvkEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVdrsgDEPINVFESGNILFYLAEKFG 129
Cdd:cd03046   17 LLEEL------GLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLV----DGDLVLTESAAIILYLAEKYG 76
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
45-125 4.35e-09

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 52.19  E-value: 4.35e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  45 QLYSMGT-PNGQKVTIMFEEllaagvKEAEYDAYLIKIGDGDQFGsgFVAVNPNSKIPALVDrsGDEPInvFESGNILFY 123
Cdd:cd00570    2 KLYYFPGsPRSLRVRLALEE------KGLPYELVPVDLGEGEQEE--FLALNPLGKVPVLED--GGLVL--TESLAILEY 69

                 ..
gi 491641871 124 LA 125
Cdd:cd00570   70 LA 71
GST_C_GTT1_like cd03189
C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione ...
140-249 6.35e-08

C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 198298 [Multi-domain]  Cd Length: 123  Bit Score: 50.38  E-value: 6.35e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 140 AEVMNWLFWL---QGSA--PYLGGGFGHFYAYAPEKFEYPINRFTM----------EVKRQLDVLDKRLANNAFLGGDEY 204
Cdd:cd03189    6 AEYADYLYWLhfaEGSLmpPLLLKLVFGKIGEAPPPFFRPISRKIAdkplqafinpELKRHLDFLEDHLAKHPYFAGDEL 85
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 491641871 205 SIADIATWpwygnLVLGRAydAAEFLDVESYKNVVRWAKAIDERE 249
Cdd:cd03189   86 TAADIMMS-----FPLEAA--LARGPLLEQYPNIAAYLERIEARP 123
PLN02395 PLN02395
glutathione S-transferase
70-253 6.41e-08

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 52.17  E-value: 6.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  70 KEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsGDEPInvFESGNILFYLAEKFGH----FLPTEGAKRAEVMNW 145
Cdd:PLN02395  23 KGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVD--GDYKI--FESRAIMRYYAEKYRSqgpdLLGKTIEERGQVEQW 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 146 L-FWLQGSAPYLGG-----GFGHFYAYAPEkfEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGNLV 219
Cdd:PLN02395  99 LdVEATSYHPPLLNltlhiLFASKMGFPAD--EKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLV 176
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 491641871 220 --LGRAYdaaeflDVESYKNVVRWAKAIDEREGVKR 253
Cdd:PLN02395 177 gpIGKAY------LIKDRKHVSAWWDDISSRPAWKE 206
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
181-249 2.09e-07

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 48.05  E-value: 2.09e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 491641871  181 EVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWygnlvLGRAYDAAEFLDVESYKNVVRWAKAIDERE 249
Cdd:pfam00043  30 KVARVLSALEEVLKGQTYLVGDKLTLADIALAPA-----LLWLYELDPACLREKFPNLKAWFERVAARP 93
GST_C_Phi cd03187
C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione ...
186-253 3.05e-07

C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 198296 [Multi-domain]  Cd Length: 118  Bit Score: 47.99  E-value: 3.05e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 491641871 186 LDVLDKRLANNAFLGGDEYSIADIATWPwYGNLVLGRAYDAAefldVESYKNVVRWAKAIDEREGVKR 253
Cdd:cd03187   54 LDVYEARLSKSKYLAGDSFTLADLSHLP-NLHYLMATPSKKL----FDSRPHVKAWWEDISARPAWKK 116
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
73-128 3.12e-07

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 46.85  E-value: 3.12e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 491641871  73 EYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsGDepINVFESGNILFYLAEKF 128
Cdd:cd03050   25 PFEECPIDLRKGEQLTPEFKKINPFGKVPAIVD--GD--FTLAESVAILRYLARKF 76
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
142-245 5.65e-07

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 47.11  E-value: 5.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 142 VMNWLFWLQGSAPYLGGGFGHFYAYAPEKFEYPINRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWygnLVLG 221
Cdd:cd00299    1 VRALEDWADATLAPPLVRLLYLEKVPLPKDEAAVEAAREELPALLAALEQLLAGRPYLAGDQFSLADVALAPV---LARL 77
                         90       100
                 ....*....|....*....|....
gi 491641871 222 RAYDAAEFLDvESYKNVVRWAKAI 245
Cdd:cd00299   78 EALGPYYDLL-DEYPRLKAWYDRL 100
GST_C_GTT2_like cd03182
C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione ...
182-251 8.20e-07

C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the Saccharomyces cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 198291 [Multi-domain]  Cd Length: 116  Bit Score: 46.93  E-value: 8.20e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 491641871 182 VKRQLDVLDKRLANNAFLGGDEYSIADIATwpwYGNLVLGRAYDaaefLDV-ESYKNVVRWAKAIDEREGV 251
Cdd:cd03182   53 VIDFLPVLDKRLAESPYVAGDRFSIADITA---FVALDFAKNLK----LPVpEELTALRRWYERMAARPSA 116
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
175-244 1.15e-06

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 45.00  E-value: 1.15e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  175 INRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWYGNLvlgrAYDAAEFLDVESYKNVVRWAKA 244
Cdd:pfam13410   2 LERAREQLRAALDALEARLADGPGLLGDRPTLADIALAPVLARL----DAAYPGLDLREGYPRLRAWLER 67
GST_C_EF1Bgamma_like cd03181
Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of ...
142-241 3.08e-06

Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins; Glutathione S-transferase (GST) C-terminal domain family, Gamma subunit of Elongation Factor 1B (EF1Bgamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds to membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression. Also included in this subfamily is the GST_C-like domain at the N-terminus of human valyl-tRNA synthetase (ValRS) and its homologs. Metazoan ValRS forms a stable complex with Elongation Factor-1H (EF-1H), and together, they catalyze consecutive steps in protein biosynthesis, tRNA aminoacylation and its transfer to EF.


Pssm-ID: 198290 [Multi-domain]  Cd Length: 123  Bit Score: 45.24  E-value: 3.08e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 142 VMNWLFWLQGSAPYLgggfghfyAYAPEKFEypinrftMEVKRQLDVLDKRLANNAFLGGDEYSIADIATwpwYGNLVLG 221
Cdd:cd03181   20 AATWVLPLLGIAPYN--------KKAVDKAK-------EDLKRALGVLEEHLLTRTYLVGERITLADIFV---ASALLRG 81
                         90       100
                 ....*....|....*....|...
gi 491641871 222 RAYdaaeFLDVE---SYKNVVRW 241
Cdd:cd03181   82 FET----VLDPEfrkKYPNVTRW 100
GST_C_Beta cd03188
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione ...
139-253 4.15e-06

C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.


Pssm-ID: 198297 [Multi-domain]  Cd Length: 113  Bit Score: 44.93  E-value: 4.15e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 139 RAEVMNWLFWLQGSapyLGGGFGHFyaYAPEKFEYPINRFTME------VKRQLDVLDKRLANNAFLGGDEYSIAD---- 208
Cdd:cd03188    3 RARLLEWLNFIASE---LHKAFGPL--FYPARWADDALAEEVKaaarerLERRLAYLDAQLAGGPYLLGDQFSVADaylf 77
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 491641871 209 -IATWpwygnlvlGRAYDaaefLDVESYKNVVRWAKAIDEREGVKR 253
Cdd:cd03188   78 vVLRW--------ARAVG----LDLSDWPHLAAYLARVAARPAVQA 111
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
43-126 4.45e-06

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 43.83  E-value: 4.45e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871   43 PFQLYSM-GTPNGQKVTImfeeLLAAgvKEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsGDEPInvFESGNIL 121
Cdd:pfam02798   2 VLTLYGIrGSPRAHRIRW----LLAE--KGVEYEIVPLDFGAGPEKSPELLKLNPLGKVPALED--GGKKL--TESRAIL 71

                  ....*
gi 491641871  122 FYLAE 126
Cdd:pfam02798  72 EYIAR 76
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
52-127 7.29e-06

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 43.00  E-value: 7.29e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 491641871   52 PNGQKVTIMFEEllaagvKEAEYDAYLIKIgDGDQFGSGFVAVNPNSKIPALVDRSGDepiNVFESGNILFYLAEK 127
Cdd:pfam13409   3 PFSHRVRLALEE------KGLPYEIELVDL-DPKDKPPELLALNPLGTVPVLVLPDGT---VLTDSLVILEYLEEL 68
GST_C_5 cd03196
C-terminal, alpha helical domain of an unknown subfamily 5 of Glutathione S-transferases; ...
166-213 8.61e-06

C-terminal, alpha helical domain of an unknown subfamily 5 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198305 [Multi-domain]  Cd Length: 115  Bit Score: 44.07  E-value: 8.61e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 491641871 166 YAPEKFEYPiNRF---TMEVKRQ-----LDVLDKRLANNAFLGGDEYSIADIATWP 213
Cdd:cd03196   23 PHLDRYKYA-DRYpedDEEEYRAqaeefLAELEARLSQHAYLFGDRPSLADYAIFP 77
PLN02473 PLN02473
glutathione S-transferase
53-253 2.64e-05

glutathione S-transferase


Pssm-ID: 166114 [Multi-domain]  Cd Length: 214  Bit Score: 44.21  E-value: 2.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  53 NGQKVTIMFEEllaagvKEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsGDepINVFESGNILFYLAEKFG--- 129
Cdd:PLN02473  13 NPQRVLLCFLE------KGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIED--GD--LKLFESRAIARYYATKYAdqg 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 130 -HFLPTEGAKRAEVMNWLfwlQGSAPYlgggfghFYAYA----------PEKFE----YPINRFTMEVKRQLDVLDKRLA 194
Cdd:PLN02473  83 tDLLGKTLEHRAIVDQWV---EVENNY-------FYAVAlplvinlvfkPRLGEpcdvALVEELKVKFDKVLDVYENRLA 152
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 491641871 195 NNAFLGGDEYSIADIATWPWYGNLVLGRAYDAAefldVESYKNVVRWAKAIDEREGVKR 253
Cdd:PLN02473 153 TNRYLGGDEFTLADLTHMPGMRYIMNETSLSGL----VTSRENLNRWWNEISARPAWKK 207
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
59-128 3.73e-05

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 40.98  E-value: 3.73e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  59 IMFEELlaagvkEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDRSGdEPInvFESGNILFYLAEKF 128
Cdd:cd03057   16 IALEEL------GLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDG-EVL--TESAAILQYLADLH 76
GST_C_AaRS_like cd10289
Glutathione S-transferase C-terminal-like, alpha helical domain of various Aminoacyl-tRNA ...
181-245 5.02e-05

Glutathione S-transferase C-terminal-like, alpha helical domain of various Aminoacyl-tRNA synthetases and similar domains; Glutathione S-transferase (GST) C-terminal domain family, Aminoacyl-tRNA synthetase (AaRS)-like subfamily; This model characterizes the GST_C-like domain found in the N-terminal region of some eukaryotic AaRSs, as well as similar domains found in proteins involved in protein synthesis including Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 2 (AIMP2), AIMP3, and eukaryotic translation Elongation Factor 1 beta (eEF1b). AaRSs comprise a family of enzymes that catalyze the coupling of amino acids with their matching tRNAs. This involves the formation of an aminoacyl adenylate using ATP, followed by the transfer of the activated amino acid to the 3'-adenosine moiety of the tRNA. AaRSs may also be involved in translational and transcriptional regulation, as well as in tRNA processing. AaRSs in this subfamily include GluRS from lower eukaryotes, as well as GluProRS, MetRS, and CysRS from higher eukaryotes. AIMPs are non-enzymatic cofactors that play critical roles in the assembly and formation of a macromolecular multi-tRNA synthetase protein complex found in higher eukaryotes. The GST_C-like domain is involved in protein-protein interactions, mediating the formation of aaRS complexes such as the MetRS-Arc1p-GluRS ternary complex in lower eukaryotes and the multi-aaRS complex in higher eukaryotes, that act as molecular hubs for protein synthesis. AaRSs from prokaryotes, which are active as dimers, do not contain this GST_C-like domain.


Pssm-ID: 198322 [Multi-domain]  Cd Length: 82  Bit Score: 41.14  E-value: 5.02e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 491641871 181 EVKRQLDVLDKRLANNAFLGGDEYSIADIATWpwygnLVLGRAYDAAEFLDVESYKNVVRWAKAI 245
Cdd:cd10289   20 ELEALLKSLNSYLASRTFLVGYSLTLADVAVF-----SALYPSGQKLSDKEKKKFPHVTRWFNHI 79
GST_C_2 cd03180
C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; ...
137-216 6.09e-05

C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198289 [Multi-domain]  Cd Length: 110  Bit Score: 41.50  E-value: 6.09e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 137 AKRAEVMNWLFWLQGS-APYLGGGFGHFYAYAPEKFEYP-INRFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIA---- 210
Cdd:cd03180    1 AQRALADRWMDWQTSTlNPAFRYAFWGLVRTPPEQRDPAaIAASLAACNKLMAILDAQLARQAYLAGDRFTLADIAlgcs 80

                 ....*.
gi 491641871 211 TWPWYG 216
Cdd:cd03180   81 VYRWLE 86
PRK10542 PRK10542
glutathionine S-transferase; Provisional
88-252 1.07e-04

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 42.36  E-value: 1.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  88 GSGFVAVNPNSKIPALVDrsgDEPINVFESGNILFYLAEKFG--HFL-PTEGAKRAEVMNWLFWLqgsAPYLGGGFGH-F 163
Cdd:PRK10542  40 GDDYLAINPKGQVPALLL---DDGTLLTEGVAIMQYLADSVPdrQLLaPVGSLSRYHTIEWLNYI---ATELHKGFTPlF 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 164 YAYAPEKFEyPINRFTMEvkRQLDVLDKRLANNAFLGGDEYSIADIatwpwYGNLVLGRAYdaAEFLDVESYKNVVRWAK 243
Cdd:PRK10542 114 RPDTPEEYK-PTVRAQLE--KKFQYVDEALADEQWICGQRFTIADA-----YLFTVLRWAY--AVKLNLEGLEHIAAYMQ 183

                 ....*....
gi 491641871 244 AIDEREGVK 252
Cdd:PRK10542 184 RVAERPAVA 192
GST_N_2 cd03047
GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with ...
53-125 1.54e-04

GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.


Pssm-ID: 239345 [Multi-domain]  Cd Length: 73  Bit Score: 39.22  E-value: 1.54e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 491641871  53 NGQKVTIMFEELlaaGVKEAEYDAylikigdGDQFGS----GFVAVNPNSKIPALVDrsGDEPInvFESGNILFYLA 125
Cdd:cd03047   11 NVQKVLWLLDEL---GLPYERIDA-------GGQFGGldtpEFLAMNPNGRVPVLED--GDFVL--WESNAILRYLA 73
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
43-127 2.57e-04

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 38.79  E-value: 2.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  43 PFQLYSM-GTPNGQKVTIMFEEllaagvKEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVDrsgdEPINVFESGNIL 121
Cdd:cd03053    1 VLKLYGAaMSTCVRRVLLCLEE------KGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALED----GDLKLFESRAIT 70

                 ....*.
gi 491641871 122 FYLAEK 127
Cdd:cd03053   71 RYLAEK 76
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
168-247 5.19e-04

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 39.05  E-value: 5.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 168 PEKFEYpinrftmeVKRQLDVLDKRLANNAFLGGDEYSIADIAtwpwygnLVLGRA-YDAAEFlDVESYKNVVRWAKAID 246
Cdd:cd03177   37 EEKLDK--------LEEALEFLETFLEGSDYVAGDQLTIADLS-------LVATVStLEVVGF-DLSKYPNVAAWYERLK 100

                 .
gi 491641871 247 E 247
Cdd:cd03177  101 A 101
GST_C_AIMP3 cd10305
Glutathione S-transferase C-terminal-like, alpha helical domain of Aminoacyl tRNA synthetase ...
139-255 7.17e-04

Glutathione S-transferase C-terminal-like, alpha helical domain of Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 3; Glutathione S-transferase (GST) C-terminal domain family, Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein (AIMP) 3 subfamily; AIMPs are non-enzymatic cofactors that play critical roles in the assembly and formation of a macromolecular multi-tRNA synthetase protein complex that functions as a molecular hub to coordinate protein synthesis. There are three AIMPs, named AIMP1-3, which play diverse regulatory roles. AIMP3, also called p18 or eukaryotic translation elongation factor 1 epsilon-1 (EEF1E1), contains a C-terminal domain with similarity to the C-terminal alpha helical domain of GSTs. It specifically interacts with methionyl-tRNA synthetase (MetRS) and is translocated to the nucleus during DNA synthesis or in response to DNA damage and oncogenic stress. In the nucleus, it interacts with ATM and ATR, which are upstream kinase regulators of p53. It appears to work against DNA damage in cooperation with AIMP2, and similar to AIMP2, AIMP3 is also a haploinsufficient tumor suppressor. AIMP3 transgenic mice have shorter lifespans than wild-type mice and they show characteristics of progeria, suggesting that AIMP3 may also be involved in cellular and organismal aging.


Pssm-ID: 198338 [Multi-domain]  Cd Length: 101  Bit Score: 38.04  E-value: 7.17e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 139 RAEVMNWL-FWLQGSAPylgggfghfyayAPEKFEypinrftmeVKRQLDVLDKRLANNAFLGGDEYSIADIATWpwYGn 217
Cdd:cd10305    4 RAQVDQWLeYRVTQVAP------------ASDKAD---------AKSLLKELNSYLQDRTYLVGHKLTLADVVLY--YG- 59
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 491641871 218 lvLGRAYDAAEFLDVESYKNVVRWAKAIDEREGVKRGR 255
Cdd:cd10305   60 --LHPIMKDLSPQEKEQYLNVSRWFDHVQHLPGIRQHL 95
GST_C_Theta cd03183
C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione ...
138-211 1.34e-03

C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is the subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from the aryl or alkyl sulfate esters.


Pssm-ID: 198292 [Multi-domain]  Cd Length: 126  Bit Score: 37.96  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 138 KRA---EVMNW-----------LFWLQGSAPYLGGgfghfyayaPEKFEYPINRFTMEVKRQLDVLDKR-LANNAFLGGD 202
Cdd:cd03183    1 KRArvdEYLAWqhtnlrlgcaaYFWQKVLLPLFGG---------TPVSPEKVKKAEENLEESLDLLENKfLKDKPFLAGD 71

                 ....*....
gi 491641871 203 EYSIADIAT 211
Cdd:cd03183   72 EISIADLSA 80
GST_C_7 cd03206
C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases; ...
142-241 1.37e-03

C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198315 [Multi-domain]  Cd Length: 100  Bit Score: 37.20  E-value: 1.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871 142 VMNWLFWlqgSAPYLGGGFGHfyAYAPEKFEYPIN--RFTMEVKRQLDVLDKRLANNAFLGGDEYSIADIATWPWygnlv 219
Cdd:cd03206    1 VQRWLSF---AAGEIAHGPAA--ARLIHLFGAPLDpeRARAISHRLLRLLDQHLAGRDWLAGDRPTIADVACYPY----- 70
                         90       100
                 ....*....|....*....|..
gi 491641871 220 LGRAYDAAefLDVESYKNVVRW 241
Cdd:cd03206   71 IALAPEGG--VSLEPYPAIRAW 90
GST_N_4 cd03056
GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with ...
91-125 3.08e-03

GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239354 [Multi-domain]  Cd Length: 73  Bit Score: 35.63  E-value: 3.08e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 491641871  91 FVAVNPNSKIPALVdrsgDEPINVFESGNILFYLA 125
Cdd:cd03056   43 FLALNPNGEVPVLE----LDGRVLAESNAILVYLA 73
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
65-124 3.37e-03

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 35.62  E-value: 3.37e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871  65 LAAGVKEAEYDAYLIKIGDGDQFGSGFVAVNPNSKIPALVdrsgDEPINVFESGNILFYL 124
Cdd:cd03042   17 IALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLV----IDGLVLTQSLAIIEYL 72
GST_C_Omega cd03184
C-terminal, alpha helical domain of Class Omega Glutathione S-transferases; Glutathione ...
180-252 3.50e-03

C-terminal, alpha helical domain of Class Omega Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.


Pssm-ID: 198293 [Multi-domain]  Cd Length: 124  Bit Score: 36.53  E-value: 3.50e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 491641871 180 MEVKRQLDVLDKRLA--NNAFLGGDEYSIADIATWPWYGNLVLGRAYDAAEFlDVESYKNVVRWAKAIDEREGVK 252
Cdd:cd03184   35 EELRSALENLEEELAkrGTPFFGGNSPGMVDYMIWPWFERLEALKLLDGYEL-CLDRFPKLKKWMAAMKQDPAVK 108
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
46-129 4.93e-03

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 35.28  E-value: 4.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491641871   46 LYSM-GTPNGQKVTIMFEELlaaGVKeaeYDAYLIKIGDGDQfgsGFVAVNPNSKIPALVDrsgDEPInVFESGNILFYL 124
Cdd:pfam13417   1 LYGFpGSPYARRVRIALNEK---GLP---YEFVPIPPGDHPP---ELLAKNPLGKVPVLED---DGGI-LCESLAIIDYL 67

                  ....*
gi 491641871  125 AEKFG 129
Cdd:pfam13417  68 EELYP 72
GST_C_GluProRS_N cd10309
Glutathione S-transferase C-terminal-like, alpha helical domain of bifunctional ...
189-245 8.35e-03

Glutathione S-transferase C-terminal-like, alpha helical domain of bifunctional Glutamyl-Prolyl-tRNA synthetase; Glutathione S-transferase (GST) C-terminal domain family, bifunctional GluRS-Prolyl-tRNA synthetase (GluProRS) subfamily; This model characterizes the GST_C-like domain found in the N-terminal region of GluProRS from higher eukaryotes. Aminoacyl-tRNA synthetases (aaRSs) comprise a family of enzymes that catalyze the coupling of amino acids with their matching tRNAs. This involves the formation of an aminoacyl adenylate using ATP, followed by the transfer of the activated amino acid to the 3'-adenosine moiety of the tRNA. AaRSs may also be involved in translational and transcriptional regulation, as well as in tRNA processing. The GST_C-like domain of GluProRS may be involved in protein-protein interactions, mediating the formation of the multi-aaRS complex in higher eukaryotes. The multi-aaRS complex acts as a molecular hub for protein synthesis. AaRSs from prokaryotes, which are active as dimers, do not contain this GST_C-like domain.


Pssm-ID: 198342 [Multi-domain]  Cd Length: 81  Bit Score: 34.60  E-value: 8.35e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 491641871 189 LDKRLANNAFLGGDEYSIADIATWpwygnlvlGRAYDAAEFLDV-ESYKNVVRWAKAI 245
Cdd:cd10309   29 LDKALSLRTYLVGNSLTLADFAVW--------AALRGNGEWLASkEKYVNVTRWFKFI 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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