MULTISPECIES: Trm112 family protein [Corynebacterium]
Protein Classification
Trm112 family protein( domain architecture ID 10006712)
Trm112 family protein with similarity to Schizosaccharomyces pombe multifunctional methyltransferase subunit trm112, which acts as an activator of both rRNA/tRNA and protein methyltransferases
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Trm112 | COG2835 | RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; |
3-56 | 1.80e-21 | ||
RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; : Pssm-ID: 442083 [Multi-domain] Cd Length: 60 Bit Score: 78.00 E-value: 1.80e-21
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| Name | Accession | Description | Interval | E-value | ||
| Trm112 | COG2835 | RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; |
3-56 | 1.80e-21 | ||
RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; Pssm-ID: 442083 [Multi-domain] Cd Length: 60 Bit Score: 78.00 E-value: 1.80e-21
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| Trm112p | pfam03966 | Trm112p-like protein; The function of this family is uncertain. The bacterial members are ... |
4-43 | 5.94e-12 | ||
Trm112p-like protein; The function of this family is uncertain. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C terminus contains the strongest conservation. Trm112p is required for tRNA methylation in S. cerevisiae and is found in complexes with 2 tRNA methylases (TRM9 and TRM11) also with putative methyltransferase YDR140W. The zinc-finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast. The crystal structure of Ynr046w has been determined to 1.7 A resolution. It comprises a zinc-binding domain built from both the N- and C-terminal sequences and an inserted domain, absent from bacterial and archaeal orthologs of the protein, composed of three alpha-helices. Pssm-ID: 397869 Cd Length: 44 Bit Score: 53.32 E-value: 5.94e-12
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| PRK11827 | PRK11827 | protein YcaR; |
3-52 | 8.65e-07 | ||
protein YcaR; Pssm-ID: 183328 Cd Length: 60 Bit Score: 40.74 E-value: 8.65e-07
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| Name | Accession | Description | Interval | E-value | ||
| Trm112 | COG2835 | RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; |
3-56 | 1.80e-21 | ||
RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; Pssm-ID: 442083 [Multi-domain] Cd Length: 60 Bit Score: 78.00 E-value: 1.80e-21
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| Trm112p | pfam03966 | Trm112p-like protein; The function of this family is uncertain. The bacterial members are ... |
4-43 | 5.94e-12 | ||
Trm112p-like protein; The function of this family is uncertain. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C terminus contains the strongest conservation. Trm112p is required for tRNA methylation in S. cerevisiae and is found in complexes with 2 tRNA methylases (TRM9 and TRM11) also with putative methyltransferase YDR140W. The zinc-finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast. The crystal structure of Ynr046w has been determined to 1.7 A resolution. It comprises a zinc-binding domain built from both the N- and C-terminal sequences and an inserted domain, absent from bacterial and archaeal orthologs of the protein, composed of three alpha-helices. Pssm-ID: 397869 Cd Length: 44 Bit Score: 53.32 E-value: 5.94e-12
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| PRK11827 | PRK11827 | protein YcaR; |
3-52 | 8.65e-07 | ||
protein YcaR; Pssm-ID: 183328 Cd Length: 60 Bit Score: 40.74 E-value: 8.65e-07
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