View
Concise Results
Standard Results
Full Results
MULTISPECIES: preprotein translocase subunit SecY [Pasteurellaceae]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
15-431
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 641.74
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 15 TG EL KS R L LF V LG A LIV F R I GS F IPVPGID ASV L SE L VR QQ Q G TIIDMF NMFSGGALSR A SIFALGIMPYI S ASII I QLL 94
Cdd:COG0201 11 IP EL RK R I LF T LG I LIV Y R L GS H IPVPGID PAA L AQ L FA QQ S G GLLGLL NMFSGGALSR F SIFALGIMPYI T ASII M QLL 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 95 T A V H P A L A EL K KEGE A GR R KI SK YTRY A T LL LA FI Q SI GI S L A L PNMLA -- GLV PN P NM LFY VTS VI S L VT GTMFLMWLG 172
Cdd:COG0201 91 T V V I P K L E EL Q KEGE E GR K KI TQ YTRY L T VV LA LL Q AF GI A L G L RSGPP gg GLV ID P GI LFY LLT VI T L TA GTMFLMWLG 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 173 EQITERGIGNGISLIIFAGIVA D LPS VIG Q TI E QS R Q GE I S L L V LLL IA V V A F AV TY FVVFVE RG QRRI V V N YA S R QQ GR 252
Cdd:COG0201 171 EQITERGIGNGISLIIFAGIVA R LPS ALA Q IF E LV R T GE L S I L L LLL LL V L A L AV IA FVVFVE QA QRRI P V Q YA K R VV GR 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 253 M M APARQSH LPLKVNMAGVIP A IFASS II LFPATIAQ W FG T S E G fe WL FDLSQL L Q PG Q PLYIVL FTMAV IFF AF FYT GM 332
Cdd:COG0201 251 R M YGGQSTY LPLKVNMAGVIP I IFASS LL LFPATIAQ F FG G S S G -- WL QWIANY L S PG S PLYIVL YALLI IFF TY FYT AI 328
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 333 QY NP RDT ADNLKKSG A F V PG Y RPG EQ T SR Y I DKV M TRLTL I GA LYITFVCLV P Y I ITSLWK V S F QL GGTSLLIVV V V IM D 412
Cdd:COG0201 329 TF NP EEI ADNLKKSG G F I PG I RPG KP T AE Y L DKV L TRLTL V GA IFLALIAIL P E I LGAITG V P F YF GGTSLLIVV G V AL D 408
410
....*....|....*....
gi 491995449 413 FIA Q VQ S H L MSLQ Y DSV LK 431
Cdd:COG0201 409 TMK Q IE S Q L LMRH Y EGF LK 427
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
15-431
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 641.74
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 15 TG EL KS R L LF V LG A LIV F R I GS F IPVPGID ASV L SE L VR QQ Q G TIIDMF NMFSGGALSR A SIFALGIMPYI S ASII I QLL 94
Cdd:COG0201 11 IP EL RK R I LF T LG I LIV Y R L GS H IPVPGID PAA L AQ L FA QQ S G GLLGLL NMFSGGALSR F SIFALGIMPYI T ASII M QLL 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 95 T A V H P A L A EL K KEGE A GR R KI SK YTRY A T LL LA FI Q SI GI S L A L PNMLA -- GLV PN P NM LFY VTS VI S L VT GTMFLMWLG 172
Cdd:COG0201 91 T V V I P K L E EL Q KEGE E GR K KI TQ YTRY L T VV LA LL Q AF GI A L G L RSGPP gg GLV ID P GI LFY LLT VI T L TA GTMFLMWLG 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 173 EQITERGIGNGISLIIFAGIVA D LPS VIG Q TI E QS R Q GE I S L L V LLL IA V V A F AV TY FVVFVE RG QRRI V V N YA S R QQ GR 252
Cdd:COG0201 171 EQITERGIGNGISLIIFAGIVA R LPS ALA Q IF E LV R T GE L S I L L LLL LL V L A L AV IA FVVFVE QA QRRI P V Q YA K R VV GR 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 253 M M APARQSH LPLKVNMAGVIP A IFASS II LFPATIAQ W FG T S E G fe WL FDLSQL L Q PG Q PLYIVL FTMAV IFF AF FYT GM 332
Cdd:COG0201 251 R M YGGQSTY LPLKVNMAGVIP I IFASS LL LFPATIAQ F FG G S S G -- WL QWIANY L S PG S PLYIVL YALLI IFF TY FYT AI 328
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 333 QY NP RDT ADNLKKSG A F V PG Y RPG EQ T SR Y I DKV M TRLTL I GA LYITFVCLV P Y I ITSLWK V S F QL GGTSLLIVV V V IM D 412
Cdd:COG0201 329 TF NP EEI ADNLKKSG G F I PG I RPG KP T AE Y L DKV L TRLTL V GA IFLALIAIL P E I LGAITG V P F YF GGTSLLIVV G V AL D 408
410
....*....|....*....
gi 491995449 413 FIA Q VQ S H L MSLQ Y DSV LK 431
Cdd:COG0201 409 TMK Q IE S Q L LMRH Y EGF LK 427
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
19-426
2.13e-141
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 410.14
E-value: 2.13e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 19 KSR LLF V LG A L IV FRIG S FIP V PGIDAS VLSE L VR Q Q qg T I IDMF N M FSGGAL SRA SIFALGI M PYI S ASIIIQLLT - A V 97
Cdd:TIGR00967 1 REK LLF T LG L L VL FRIG T FIP I PGIDAS AFQN L IQ Q N -- P I FGLL N T FSGGAL GQI SIFALGI S PYI T ASIIIQLLT g D V 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 98 H P A L AEL KKEGE A GRRKI SKY TRY A TL L LAFIQS I GI SLAL pnm LA G L V PN P NML FY VTS VI S L V TG T M FL MWLGEQIT E 177
Cdd:TIGR00967 79 P P L L QLQ KKEGE I GRRKI NQL TRY L TL I LAFIQS L GI VMTG --- MY G Y V GD P GAF FY LLI VI Q L T TG S M IV MWLGEQIT K 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 178 R GIGNGISL I IFAGI V A DL PS VIG Q TI E ------ QSRQGEISL L VL LL IAVVAFA V TYF VVFV ERGQ R R I VVNY A S RQ Q G 251
Cdd:TIGR00967 156 Y GIGNGISL L IFAGI A A TI PS GLL Q PT E vrqskv RDLISFLQN L PF LL YLIATII V FAV VVFV QQAR R K I PIQS A K RQ G G 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 252 R mm APARQSH LPLK V N M AGVIP A IFAS SIILF PATI A Q WFGTSE G FE W LFDLSQL L QPGQ P LYIV L FTMAV IFF A FFY TG 331
Cdd:TIGR00967 236 R -- RGSQSTY LPLK L N Y AGVIP V IFAS ALLSN PATI S Q FLNSNQ G GA W FLNPILS L SLSD P IGAI L YLILI IFF S FFY VE 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 332 M Q Y NP R D T A D NLKK S G A F V PG Y RPG EQ T SR Y IDK V MT RLT LI G A L YITFVC L V P YIITSLWKV -- S FQ LGGTSLLIVV V V 409
Cdd:TIGR00967 314 L Q L NP E D M A K NLKK Q G M F I PG I RPG KM T EK Y LKR V IP RLT FV G S L FLGLIA L L P NFLGAIGGL pt S KG LGGTSLLIVV G V 393
410
....*....|....*..
gi 491995449 410 IM D FIA Q VQ S H L M S LQ Y 426
Cdd:TIGR00967 394 AI D TYK Q LE S E L I S RN Y 410
SecY
pfam00344 SecY;
75-414
3.15e-140
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 404.13
E-value: 3.15e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 75 S I FALGIMPYI S ASII I QLL TA V h PA L A ELKKEGE A GR R KI SK YTRY A T LL LA F IQ S IGI S L A L pnmlag L V PNPNML FY 154
Cdd:pfam00344 1 S L FALGIMPYI T ASII M QLL GV V - IS L E ELKKEGE E GR K KI NQ YTRY L T VV LA L IQ A IGI V L S L ------ G V YGGGGG FY 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 155 VTS V IS L VT GTMFLMWLGEQIT ER GIGNGISLIIFAGIVA D LPS VIGQ - T I EQS R Q G EI S L L VL LL IAVVAF AV TYF VV F 233
Cdd:pfam00344 74 LLI V LQ L TA GTMFLMWLGEQIT KY GIGNGISLIIFAGIVA R LPS AFSG a L I ALF R L G AR S I L PN LL LLIITL AV IAL VV Y 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 234 VERGQ RRI V V N YA S R QQ G rmmap ARQ S H LPLK V N M AGVIP A IFASS IIL FPATIAQ W FG tsegfew L FDLSQL L Q PG Q PL 313
Cdd:pfam00344 154 LQQAE RRI P V Q YA K R VV G ----- GQS S Y LPLK L N Y AGVIP I IFASS LLS FPATIAQ F FG ------- L QFIAAA L D PG S PL 221
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 314 Y I VL FTMAV IFFA F FYT GMQY NP R D T A D NLKK S G A F V PG Y RPG EQ T SR Y I D K V MT R L TL I GAL YITFVCLV P YIITS L WK 393
Cdd:pfam00344 222 Y T VL YALLI IFFA Y FYT AITF NP K D I A E NLKK Q G G F I PG I RPG KP T AK Y L D R V IP R I TL L GAL FLGIIAVL P DLLGA L TG 301
330 340
....*....|....*....|.
gi 491995449 394 V S F QL GGTSLLIVV V V IM D FI 414
Cdd:pfam00344 302 V P F GF GGTSLLIVV G V AL D TY 322
secY
CHL00161 preprotein translocase subunit SecY; Validated
17-427
9.79e-106
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 319.64
E-value: 9.79e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 17 EL KS RLLF V LG A L IVF R I G S FIPVPGID ASV L SELV rq QQGTIIDMF N M FSGG ALSRASI FALGI M PYI S ASIIIQLLT A 96
Cdd:CHL00161 9 EL LN RLLF T LG L L LLI R L G T FIPVPGID HTQ L YPSL -- SNNPLLNLL N T FSGG GFFVIGL FALGI L PYI N ASIIIQLLT S 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 97 VH P A L AE L K KE - GEAGRRKI SK YTRY A TL LL A F IQSIGIS LA L PN mlag LVP N P N M L FYVTS V IS L VT G T M FLM WL G E Q I 175
Cdd:CHL00161 87 II P S L EK L Q KE e GEAGRRKI NQ YTRY L TL GW A I IQSIGIS FW L KP ---- YLF N W N L L LALEI V LA L TS G S M IVL WL S E L I 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 176 TE R G I GNG I SL I IF AG IV AD LP SVIGQTI e Q S RQGE I SL L VL LL IAVVA F AVTYFVV F VERGQ R R I VV n YASR Q Q G RMMA 255
Cdd:CHL00161 163 TE K G L GNG S SL L IF FN IV SN LP KLLQSLL - F S LSAN I TI L SI LL LLFLF F ITLIGII F LQEAI R K I PL - ISAK Q L G KSSR 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 256 P A RQ S H LPL KV N M AGV I P A IFAS SIILF P ATIAQ w FGTSEGFEW L FD L SQL L QPGQP LY I VL FTMAVI FF AF FY TGMQY N 335
Cdd:CHL00161 241 L A SN S Y LPL RL N Q AGV M P I IFAS ALLVL P GYLTN - ILLNQFLLP L LS L FLQ L ASFKI LY L VL YFVLIL FF SY FY STIVL N 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 336 P R D TAD NL K K SGAFV PG Y RPG EQ T SR Y ID K VMT RLTL I GAL YIT F VC L V P YI I T S LWKV S - F Q - LG G TSLLI V V V V IM D F 413
Cdd:CHL00161 320 P K D ISE NL Q K MAVSI PG I RPG KA T TK Y LK K TLN RLTL L GAL FLA F IA L L P NL I E S VLNL S v F K g LG T TSLLI L V G V AI D T 399
410
....*....|....
gi 491995449 414 IA Q V Q SH L M S LQ Y D 427
Cdd:CHL00161 400 SR Q I Q TY L I S NN Y E 413
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
15-431
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 641.74
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 15 TG EL KS R L LF V LG A LIV F R I GS F IPVPGID ASV L SE L VR QQ Q G TIIDMF NMFSGGALSR A SIFALGIMPYI S ASII I QLL 94
Cdd:COG0201 11 IP EL RK R I LF T LG I LIV Y R L GS H IPVPGID PAA L AQ L FA QQ S G GLLGLL NMFSGGALSR F SIFALGIMPYI T ASII M QLL 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 95 T A V H P A L A EL K KEGE A GR R KI SK YTRY A T LL LA FI Q SI GI S L A L PNMLA -- GLV PN P NM LFY VTS VI S L VT GTMFLMWLG 172
Cdd:COG0201 91 T V V I P K L E EL Q KEGE E GR K KI TQ YTRY L T VV LA LL Q AF GI A L G L RSGPP gg GLV ID P GI LFY LLT VI T L TA GTMFLMWLG 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 173 EQITERGIGNGISLIIFAGIVA D LPS VIG Q TI E QS R Q GE I S L L V LLL IA V V A F AV TY FVVFVE RG QRRI V V N YA S R QQ GR 252
Cdd:COG0201 171 EQITERGIGNGISLIIFAGIVA R LPS ALA Q IF E LV R T GE L S I L L LLL LL V L A L AV IA FVVFVE QA QRRI P V Q YA K R VV GR 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 253 M M APARQSH LPLKVNMAGVIP A IFASS II LFPATIAQ W FG T S E G fe WL FDLSQL L Q PG Q PLYIVL FTMAV IFF AF FYT GM 332
Cdd:COG0201 251 R M YGGQSTY LPLKVNMAGVIP I IFASS LL LFPATIAQ F FG G S S G -- WL QWIANY L S PG S PLYIVL YALLI IFF TY FYT AI 328
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 333 QY NP RDT ADNLKKSG A F V PG Y RPG EQ T SR Y I DKV M TRLTL I GA LYITFVCLV P Y I ITSLWK V S F QL GGTSLLIVV V V IM D 412
Cdd:COG0201 329 TF NP EEI ADNLKKSG G F I PG I RPG KP T AE Y L DKV L TRLTL V GA IFLALIAIL P E I LGAITG V P F YF GGTSLLIVV G V AL D 408
410
....*....|....*....
gi 491995449 413 FIA Q VQ S H L MSLQ Y DSV LK 431
Cdd:COG0201 409 TMK Q IE S Q L LMRH Y EGF LK 427
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
19-426
2.13e-141
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 410.14
E-value: 2.13e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 19 KSR LLF V LG A L IV FRIG S FIP V PGIDAS VLSE L VR Q Q qg T I IDMF N M FSGGAL SRA SIFALGI M PYI S ASIIIQLLT - A V 97
Cdd:TIGR00967 1 REK LLF T LG L L VL FRIG T FIP I PGIDAS AFQN L IQ Q N -- P I FGLL N T FSGGAL GQI SIFALGI S PYI T ASIIIQLLT g D V 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 98 H P A L AEL KKEGE A GRRKI SKY TRY A TL L LAFIQS I GI SLAL pnm LA G L V PN P NML FY VTS VI S L V TG T M FL MWLGEQIT E 177
Cdd:TIGR00967 79 P P L L QLQ KKEGE I GRRKI NQL TRY L TL I LAFIQS L GI VMTG --- MY G Y V GD P GAF FY LLI VI Q L T TG S M IV MWLGEQIT K 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 178 R GIGNGISL I IFAGI V A DL PS VIG Q TI E ------ QSRQGEISL L VL LL IAVVAFA V TYF VVFV ERGQ R R I VVNY A S RQ Q G 251
Cdd:TIGR00967 156 Y GIGNGISL L IFAGI A A TI PS GLL Q PT E vrqskv RDLISFLQN L PF LL YLIATII V FAV VVFV QQAR R K I PIQS A K RQ G G 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 252 R mm APARQSH LPLK V N M AGVIP A IFAS SIILF PATI A Q WFGTSE G FE W LFDLSQL L QPGQ P LYIV L FTMAV IFF A FFY TG 331
Cdd:TIGR00967 236 R -- RGSQSTY LPLK L N Y AGVIP V IFAS ALLSN PATI S Q FLNSNQ G GA W FLNPILS L SLSD P IGAI L YLILI IFF S FFY VE 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 332 M Q Y NP R D T A D NLKK S G A F V PG Y RPG EQ T SR Y IDK V MT RLT LI G A L YITFVC L V P YIITSLWKV -- S FQ LGGTSLLIVV V V 409
Cdd:TIGR00967 314 L Q L NP E D M A K NLKK Q G M F I PG I RPG KM T EK Y LKR V IP RLT FV G S L FLGLIA L L P NFLGAIGGL pt S KG LGGTSLLIVV G V 393
410
....*....|....*..
gi 491995449 410 IM D FIA Q VQ S H L M S LQ Y 426
Cdd:TIGR00967 394 AI D TYK Q LE S E L I S RN Y 410
SecY
pfam00344 SecY;
75-414
3.15e-140
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 404.13
E-value: 3.15e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 75 S I FALGIMPYI S ASII I QLL TA V h PA L A ELKKEGE A GR R KI SK YTRY A T LL LA F IQ S IGI S L A L pnmlag L V PNPNML FY 154
Cdd:pfam00344 1 S L FALGIMPYI T ASII M QLL GV V - IS L E ELKKEGE E GR K KI NQ YTRY L T VV LA L IQ A IGI V L S L ------ G V YGGGGG FY 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 155 VTS V IS L VT GTMFLMWLGEQIT ER GIGNGISLIIFAGIVA D LPS VIGQ - T I EQS R Q G EI S L L VL LL IAVVAF AV TYF VV F 233
Cdd:pfam00344 74 LLI V LQ L TA GTMFLMWLGEQIT KY GIGNGISLIIFAGIVA R LPS AFSG a L I ALF R L G AR S I L PN LL LLIITL AV IAL VV Y 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 234 VERGQ RRI V V N YA S R QQ G rmmap ARQ S H LPLK V N M AGVIP A IFASS IIL FPATIAQ W FG tsegfew L FDLSQL L Q PG Q PL 313
Cdd:pfam00344 154 LQQAE RRI P V Q YA K R VV G ----- GQS S Y LPLK L N Y AGVIP I IFASS LLS FPATIAQ F FG ------- L QFIAAA L D PG S PL 221
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 314 Y I VL FTMAV IFFA F FYT GMQY NP R D T A D NLKK S G A F V PG Y RPG EQ T SR Y I D K V MT R L TL I GAL YITFVCLV P YIITS L WK 393
Cdd:pfam00344 222 Y T VL YALLI IFFA Y FYT AITF NP K D I A E NLKK Q G G F I PG I RPG KP T AK Y L D R V IP R I TL L GAL FLGIIAVL P DLLGA L TG 301
330 340
....*....|....*....|.
gi 491995449 394 V S F QL GGTSLLIVV V V IM D FI 414
Cdd:pfam00344 302 V P F GF GGTSLLIVV G V AL D TY 322
secY
CHL00161 preprotein translocase subunit SecY; Validated
17-427
9.79e-106
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 319.64
E-value: 9.79e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 17 EL KS RLLF V LG A L IVF R I G S FIPVPGID ASV L SELV rq QQGTIIDMF N M FSGG ALSRASI FALGI M PYI S ASIIIQLLT A 96
Cdd:CHL00161 9 EL LN RLLF T LG L L LLI R L G T FIPVPGID HTQ L YPSL -- SNNPLLNLL N T FSGG GFFVIGL FALGI L PYI N ASIIIQLLT S 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 97 VH P A L AE L K KE - GEAGRRKI SK YTRY A TL LL A F IQSIGIS LA L PN mlag LVP N P N M L FYVTS V IS L VT G T M FLM WL G E Q I 175
Cdd:CHL00161 87 II P S L EK L Q KE e GEAGRRKI NQ YTRY L TL GW A I IQSIGIS FW L KP ---- YLF N W N L L LALEI V LA L TS G S M IVL WL S E L I 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 176 TE R G I GNG I SL I IF AG IV AD LP SVIGQTI e Q S RQGE I SL L VL LL IAVVA F AVTYFVV F VERGQ R R I VV n YASR Q Q G RMMA 255
Cdd:CHL00161 163 TE K G L GNG S SL L IF FN IV SN LP KLLQSLL - F S LSAN I TI L SI LL LLFLF F ITLIGII F LQEAI R K I PL - ISAK Q L G KSSR 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 256 P A RQ S H LPL KV N M AGV I P A IFAS SIILF P ATIAQ w FGTSEGFEW L FD L SQL L QPGQP LY I VL FTMAVI FF AF FY TGMQY N 335
Cdd:CHL00161 241 L A SN S Y LPL RL N Q AGV M P I IFAS ALLVL P GYLTN - ILLNQFLLP L LS L FLQ L ASFKI LY L VL YFVLIL FF SY FY STIVL N 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 336 P R D TAD NL K K SGAFV PG Y RPG EQ T SR Y ID K VMT RLTL I GAL YIT F VC L V P YI I T S LWKV S - F Q - LG G TSLLI V V V V IM D F 413
Cdd:CHL00161 320 P K D ISE NL Q K MAVSI PG I RPG KA T TK Y LK K TLN RLTL L GAL FLA F IA L L P NL I E S VLNL S v F K g LG T TSLLI L V G V AI D T 399
410
....*....|....
gi 491995449 414 IA Q V Q SH L M S LQ Y D 427
Cdd:CHL00161 400 SR Q I Q TY L I S NN Y E 413
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
21-432
4.63e-39
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 145.14
E-value: 4.63e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 21 RL LF VLGA L IVFRI GS F I PV P G idas V LSELVRQQQGTIIDMFNMFS GG A L SRAS IF A LG IM P YISAS II I QL LT av HPA 100
Cdd:PRK12417 15 KI LF TCFI L FIYIL GS N I SI P F ---- V SYNDMLGGHESFLKIAAANT GG D L RTLN IF S LG LG P WMTSM II L QL FS -- YRK 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 101 LAE L K K EG eag RRKISKYT R YA TL LL A F IQS IGIS L A LP NMLA gl VPNP N M L fyv TSVIS LVTGTMFL M WL GEQITER GI 180
Cdd:PRK12417 89 RDG L M K QT --- IEEQHYRE R IL TL II A V IQS LAVI L S LP SKER -- ISQT N I L --- LNTLI LVTGTMFL V WL SDLNARY GI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 181 G n G ISL I IFAGIVADL P SVIGQT I EQ S R qgeisl L V LL L IAVVAFAVTY F VV F V E RGQR RI VV N YASRQQGRM M apar Q S 260
Cdd:PRK12417 161 G - G PMP I VLVSMIKSI P QDVIEY I DA S H ------ I V II L LILLVIITLF F LY F I E LVEY RI PY N DIMNHNRFK M ---- Y S 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 261 H L PL K V N M AG VI P AIFAS S IIL FP AT ---- I AQW F GTSE G FEWLF D L sql L QP G Q PL YIVLFTMAVIFFAF F YTGMQY N P 336
Cdd:PRK12417 230 Y L SI K L N P AG GM P IMYSM S LLV FP QY iiil I LSI F PNNS G ISADM D M --- L SF G S PL GVTVYLILQFLLSY F FSFVNI N T 306
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 337 RDT A DNLK KSG AFV PG YR PG EQ T S RY IDKVMT R LTLI GAL YI T FVCLV P YII T SLWKVSFQLGGT S LLIVVV V I M D F -- I 414
Cdd:PRK12417 307 KQI A KDML KSG NYI PG VY PG KD T E RY LNYIAR R FSWF GAL FV T VIAGI P LYF T LFDPHLSTEIYF S GQFMMF V G M S F ni A 386
410
....*....|....*...
gi 491995449 415 AQVQSH L MSLQ Y DSV L KK 432
Cdd:PRK12417 387 DEIRAL L YFDK Y KPL L NQ 404
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
21-430
1.29e-37
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 141.03
E-value: 1.29e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 21 RL LF VLGA LI VFRI GS F IP V P GIDA S vl SELVRQQQGTIIDMFNMFS GG A L SRA SIF A LG IM P YISAS II I QL LTAVHPA 100
Cdd:TIGR02920 5 KI LF TCFI LI IYVL GS Y IP I P FVEV S -- KQDMEGVKNSFFKIAIANT GG N L TTL SIF S LG LG P WMTSM II L QL FSFTKSD 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 101 LAELKKEG E AGR R K iskyt R YA TL LL A F IQ SIG I SLALP N MLA gl VPNP NML F yvt SVIS LVTGT MF L M WL GEQITER GI 180
Cdd:TIGR02920 83 GFDAQSPK E QQY R E ----- R FL TL II A I IQ GLA I IHSFT N KNG -- LSDF NML L --- ATLI LVTGT CL L V WL ADLNAKY GI 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 181 G n G ISL I IFAGIVADL PS VIGQTIEQ S RQGE I S LL V LL LIAVV afavt YFVV F V ER GQR RI V VN yasrqqg RMMAPA R -- 258
Cdd:TIGR02920 153 G - G SMP I VLVSMLKNI PS NVFELFQM S YIWL I A LL I LL TLVAL ----- FLLA F I ER AEY RI P VN ------- DISLHN R sn 219
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 259 - Q S H LP L K V N M AG VIPAIFAS S IILF P AT ---- IAQW F GT S EG few LFDLSQLLQPGQ P LY I VLFTMAVIFFAF F Y T GMQ 333
Cdd:TIGR02920 220 l M S Y LP I K L N P AG GMMYMYVM S LLML P QY iiil LGRI F PN S SL --- INNWVFQFSFSS P VG I LIYLILQMLLSY F F T FVN 296
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 334 Y NP RDTADNLK KSG AFV PG YR PG EQ T S RY IDKVMT R LTLI G ALYIT F VCLV P - Y IITSLWKVSFQLGGTSLLIVVVVIMD 412
Cdd:TIGR02920 297 I NP KEISKSFR KSG NYI PG IA PG KD T Q RY LNRLAR R FCWF G GVFNA F QLGI P l Y FALFVPHLLTEAYIPGQFMMITGMSF 376
410
....*....|....*....
gi 491995449 413 F IA - QVQSH L MSLQ Y DSV L 430
Cdd:TIGR02920 377 N IA d EIRTI L YFDR Y KPL L 395
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
18-417
1.26e-15
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 78.73
E-value: 1.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 18 L K SR L LFVLGA LI VFR I GSF IP VP GI D asvlselvr Q QQGTIIDMFNMFSG G al S RASIFA LGI M P YIS A S II I QLL ta V 97
Cdd:PRK08568 26 F K EK L KWTAIV LI LYF I LTN IP LY GI S --------- Q SSQDLFELLRIIFA G -- S FGTLLQ LGI G P IVT A G II L QLL -- V 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 98 HPA L AE L KKEGEAG R RKISKYTRYATLLLAFIQ sigisl A L P NM LAG ------- L VPN P NMLFYV ts VIS L VT G TMFLMW 170
Cdd:PRK08568 93 GSK L IN L DLSDPED R ALFQGLQKLLAIVMIALE ------ A A P FV LAG afgpatg L AST P LLALLI -- FLQ L FL G GILIIL 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 171 L G E QITER GIG N GISL I I F AG I ------------------- V ADL P SVIGQTIEQSRQGEIS L LVLL L IAVVAFA --- VT 228
Cdd:PRK08568 165 L D E LVSKW GIG S GISL F I L AG V sqtifvglfnwltggqglp V GFI P ALFSAITSGNLTLALL L TTRG L LLLGLIT tiv IF 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 229 YF VV FV E RGQRR I VVNYASRQQG R M maparqs HL PLK VNMAG V I P A I FASSI --- I LFPATIA Q ----- WF GT SEG ---- 296
Cdd:PRK08568 245 LI VV YL E SMRVE I PLSHGRVRGA R G ------- RY PLK FIYVS V L P V I LVRAL qan I QLFGQLL Q rlgip IL GT YDS sgas 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 297 --------------- FE W LF D LSQLL qpgqp L Y IVLFTMAV I F FA F F Y --- TG M qy N P RDT A DN L KK SG AFV PG Y R pge Q 358
Cdd:PRK08568 318 pisglayylspphsp YD W IQ D PLRAI ----- I Y ALFMIVLS I L FA I F W vet TG L -- D P KTQ A RQ L QN SG MQI PG F R --- R 387
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 491995449 359 TSRY I D KV MT R ---- L T L IG ALYITFVCLVPYIITS L W kvsfql GGT S LL IV V VVIMDFIAQV 417
Cdd:PRK08568 388 NPKV I E KV LE R yipp V T V IG GAIVGLLAVLADLLGA L G ------ GGT G LL LT V SIVYQLYEEI 444
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
18-192
3.36e-03
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 39.60
E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 18 L K SRL L FVLG AL I VF RIGSF IP VP GI DA S VL S E lvrqqqgtii DMFN M FSGG A LS R ASIFA LGI M P YISA S III QLL TAV 97
Cdd:PTZ00219 30 F K EKV L WTAI AL F VF LVCCQ IP LY GI RS S SS S D ---------- PFYW M RVIL A SN R GTLME LGI S P IVTS S MVM QLL AGS 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491995449 98 H pa LAELKKEGEAG R RKISKYTRYAT LL LAFIQ sigisl A LPNMLA G LVPNPNMLFYVTS --- VIS L VTGTMFLMW L G E Q 174
Cdd:PTZ00219 100 K -- IIDVDQNNKED R ALFEGAQKLLG LL ITLGE ------ A VAYVWS G MYGDISEIGAGNA ili ILQ L FFAGIVVIL L D E L 171
170
....*....|....*....
gi 491995449 175 ITE - R G I G N GISL I I FAG I 192
Cdd:PTZ00219 172 LQK g Y G L G S GISL F I ATN I 190
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
