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Conserved domains on  [gi|492842950|ref|WP_005996904|]
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heme o synthase [Xanthomonas vesicatoria]

Protein Classification

protoheme IX farnesyltransferase( domain architecture ID 10792362)

protoheme IX farnesyltransferase acts in step 1 of the conversion protoheme IX to heme O in heme O biosynthesis

EC:  2.5.1.141
Gene Ontology:  GO:0016765|GO:0008495|GO:0006783|GO:0016740|GO:0048034
PubMed:  7885224|34428995

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK04375 PRK04375
protoheme IX farnesyltransferase; Provisional
 1-296 1.06e-126

protoheme IX farnesyltransferase; Provisional


:

Pssm-ID: 235293  Cd Length: 296  Bit Score: 362.92  E-value: 1.06e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   1 MAVSARDYWDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRP 80
Cdd:PRK04375   6 SRATLKDYLALTKPRVISLNLFTALGGMLLAPPGVPPLLLL---LLTLLGIALVAGAAGALNNYIDRDIDAKMERTKNRP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  81 LVVGKVRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVT 160
Cdd:PRK04375  83 LVTGRISPREALIFGLVLGVLGFLLLGLFVNPLAAWLTLAGIFFYVVVYTLWLKRRTPQNIVIGGAAGAMPPLIGWAAVT 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 161 GlptTADWiNASILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGV 240
Cdd:PRK04375 163 G---SLSW-EALILFLIIFLWTPPHFWALAIFRKDDYAAAGIPMLPVVKGIRVTKRQILLYTVLLVAVSLLPVLLGMAGL 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 492842950 241 FYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVDHLLLPW 296
Cdd:PRK04375 239 LYLVVALLLGAWFLYYAWRLYRKDDRKWARKLFRYSINYLTLLFVALLVDHLLLLS 294
 
Name Accession Description Interval E-value
PRK04375 PRK04375
protoheme IX farnesyltransferase; Provisional
 1-296 1.06e-126

protoheme IX farnesyltransferase; Provisional


Pssm-ID: 235293  Cd Length: 296  Bit Score: 362.92  E-value: 1.06e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   1 MAVSARDYWDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRP 80
Cdd:PRK04375   6 SRATLKDYLALTKPRVISLNLFTALGGMLLAPPGVPPLLLL---LLTLLGIALVAGAAGALNNYIDRDIDAKMERTKNRP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  81 LVVGKVRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVT 160
Cdd:PRK04375  83 LVTGRISPREALIFGLVLGVLGFLLLGLFVNPLAAWLTLAGIFFYVVVYTLWLKRRTPQNIVIGGAAGAMPPLIGWAAVT 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 161 GlptTADWiNASILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGV 240
Cdd:PRK04375 163 G---SLSW-EALILFLIIFLWTPPHFWALAIFRKDDYAAAGIPMLPVVKGIRVTKRQILLYTVLLVAVSLLPVLLGMAGL 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 492842950 241 FYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVDHLLLPW 296
Cdd:PRK04375 239 LYLVVALLLGAWFLYYAWRLYRKDDRKWARKLFRYSINYLTLLFVALLVDHLLLLS 294
CyoE COG0109
Polyprenyltransferase (heme O synthase) [Coenzyme transport and metabolism, Lipid transport ...
 1-295 5.44e-118

Polyprenyltransferase (heme O synthase) [Coenzyme transport and metabolism, Lipid transport and metabolism];


Pssm-ID: 439879  Cd Length: 299  Bit Score: 340.96  E-value: 5.44e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   1 MAVSARDYWDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRP 80
Cdd:COG0109   12 LRSTLRDYLALTKPRIILLLLFTALAGMLLAAGGLPDLLLL---LLTLLGGALAAGAANALNNYIDRDIDALMKRTKNRP 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  81 LVVGKVRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVT 160
Cdd:COG0109   89 LPTGRISPREALIFGLVLGVLGLALLALFVNPLAALLGLLGIFFYVVVYTLWLKRRTPQNIVIGGAAGAMPPLIGWAAVT 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 161 GLPTTADWInasiLVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGV 240
Cdd:COG0109  169 GSLSLEALL----LFLIIFLWTPPHFWALALKRRDDYARAGVPMLPVVKGERRTKRQILLYTLLLVPVSLLPYLLGMAGL 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 492842950 241 FYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVDHLLLP 295
Cdd:COG0109  245 IYLVVALVLGAWFLYLAVRLYRRPDRKWARKLFKFSILYLTLLFLALLVDHLLLL 299
PT_UbiA_Cox10 cd13957
Protoheme IX farnesyltransferase; Protoheme IX farnesyltransferase (also called heme O ...
 9-285 6.81e-96

Protoheme IX farnesyltransferase; Protoheme IX farnesyltransferase (also called heme O synthase, heme A:farnesyltransferase, cytochrome c oxidase subunit X [Cox10]) converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of the heme B porphyrin ring with a hydroxyethyl farnesyl side group. It is localized at the mitochondrial inner membrane. Eukaryotic Cox10 is important for the maturation of the heme A prosthetic group of cytochrome c oxidase (COX), the terminal component of the mitochondrial respiratory chain, that catalyzes the electron transfer from reduced cytochrome c to oxygen. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.


Pssm-ID: 260120  Cd Length: 271  Bit Score: 283.95  E-value: 6.81e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   9 WDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRP 88
Cdd:cd13957    1 LELTKPRITLLVLLTALAGYLLAPGGVPDLLLL---LLTLLGTALVSASANALNQYIERDIDAKMKRTRNRPLPSGRISP 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  89 WQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTTADW 168
Cdd:cd13957   78 KHALIFGLVLGILGLALLALFVNPLTALLGLLGIFLYVFVYTPLKKRTTPLNTVIGGIAGAIPPLIGWAAATGSLDLGAW 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 169 inasILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGVFYLGGAVV 248
Cdd:cd13957  158 ----LLFLILFLWQPPHFWALAILYRDDYARAGIPMLPVVKGERRTKRQILLYTLLLVPLSLLLYLLGLTGWIYLVVALL 233

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 492842950 249 LNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFA 285
Cdd:cd13957  234 LGLYFLYLAIKLYRSPDDKWARKLFFASLIYLPLLFL 270
cyoE_ctaB TIGR01473
protoheme IX farnesyltransferase; This model describes protoheme IX farnesyltransferase, also ...
 6-290 4.42e-83

protoheme IX farnesyltransferase; This model describes protoheme IX farnesyltransferase, also called heme O synthase, an enzyme that creates an intermediate in the biosynthesis of heme A. Prior to the description of its enzymatic function, this protein was often called a cytochrome o ubiquinol oxidase assembly factor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 273645  Cd Length: 280  Bit Score: 251.40  E-value: 4.42e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950    6 RDYWDLTKPKVVALIVFTALVGMFLAipGVPTWAQVRAGILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGK 85
Cdd:TIGR01473   1 KDYLQLTKPRIISLLLITAFAGMWLA--PGGALVNPPLLLLTLLGTTLAAASANAFNMYIDRDIDKKMKRTRNRPLVTGR 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   86 VRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTt 165
Cdd:TIGR01473  79 ISPREALAFGLLLGVLGVAILAAFVNPLAALLGLFGIFFYVIVYTIWLKRRTPQNTVIGGFAGAVPPLIGWAAVTGSIS- 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  166 adwINASILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGVFYLGG 245
Cdd:TIGR01473 158 ---LGAWLLFAIIFLWQPPHFWALALKYKDDYRAAGIPMLPVVKGERITKRQIALYTAALLPVSLLLAFLGGTGWLYLIV 234

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 492842950  246 AVVLNAVFLWYAWRM-LDPPDELFSMKMFGYSIVYLMALFAFLMVD 290
Cdd:TIGR01473 235 ATLLGALFLYLAFKFyRDPTDRKKARKLFKFSLIYLALLFVALLID 280
UbiA pfam01040
UbiA prenyltransferase family;
20-265 4.83e-39

UbiA prenyltransferase family;


Pssm-ID: 460038 [Multi-domain]  Cd Length: 250  Bit Score: 137.36  E-value: 4.83e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   20 IVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRPWQVMVFASVLI 99
Cdd:pfam01040   1 LLIPALAGLALAAGGVPDLLLL---LLALLGTVLARAAANALNDYYDRDIDAIMPRTPNRPLPSGRISPREALIFALVLL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  100 AISMTMLVvWVNVITAVLTFASMIGYaVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPttadWINASILVLIIF 179
Cdd:pfam01040  78 ALGLLLLL-LLNPLTALLGLAALLLY-VLYTLRLKRRTLLGQLVGGLAFGLPPLLGWAAVTGSL----SPLALLLALALF 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  180 IWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVtLLPVAVGMSGVFYLGGAVVLNAVFLWYAWR 259
Cdd:pfam01040 152 LWTWAIALANDLRDREDDRKAGIKTLPVVLGRKAARILLALLLAVALLL-LLLLLLLLLGGLYLLLALLLAALALLYAAR 230


                  ....*.
gi 492842950  260 MLDPPD 265
Cdd:pfam01040 231 LLRLRD 236
 
Name Accession Description Interval E-value
PRK04375 PRK04375
protoheme IX farnesyltransferase; Provisional
 1-296 1.06e-126

protoheme IX farnesyltransferase; Provisional


Pssm-ID: 235293  Cd Length: 296  Bit Score: 362.92  E-value: 1.06e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   1 MAVSARDYWDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRP 80
Cdd:PRK04375   6 SRATLKDYLALTKPRVISLNLFTALGGMLLAPPGVPPLLLL---LLTLLGIALVAGAAGALNNYIDRDIDAKMERTKNRP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  81 LVVGKVRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVT 160
Cdd:PRK04375  83 LVTGRISPREALIFGLVLGVLGFLLLGLFVNPLAAWLTLAGIFFYVVVYTLWLKRRTPQNIVIGGAAGAMPPLIGWAAVT 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 161 GlptTADWiNASILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGV 240
Cdd:PRK04375 163 G---SLSW-EALILFLIIFLWTPPHFWALAIFRKDDYAAAGIPMLPVVKGIRVTKRQILLYTVLLVAVSLLPVLLGMAGL 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 492842950 241 FYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVDHLLLPW 296
Cdd:PRK04375 239 LYLVVALLLGAWFLYYAWRLYRKDDRKWARKLFRYSINYLTLLFVALLVDHLLLLS 294
CyoE COG0109
Polyprenyltransferase (heme O synthase) [Coenzyme transport and metabolism, Lipid transport ...
 1-295 5.44e-118

Polyprenyltransferase (heme O synthase) [Coenzyme transport and metabolism, Lipid transport and metabolism];


Pssm-ID: 439879  Cd Length: 299  Bit Score: 340.96  E-value: 5.44e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   1 MAVSARDYWDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRP 80
Cdd:COG0109   12 LRSTLRDYLALTKPRIILLLLFTALAGMLLAAGGLPDLLLL---LLTLLGGALAAGAANALNNYIDRDIDALMKRTKNRP 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  81 LVVGKVRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVT 160
Cdd:COG0109   89 LPTGRISPREALIFGLVLGVLGLALLALFVNPLAALLGLLGIFFYVVVYTLWLKRRTPQNIVIGGAAGAMPPLIGWAAVT 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 161 GLPTTADWInasiLVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGV 240
Cdd:COG0109  169 GSLSLEALL----LFLIIFLWTPPHFWALALKRRDDYARAGVPMLPVVKGERRTKRQILLYTLLLVPVSLLPYLLGMAGL 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 492842950 241 FYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVDHLLLP 295
Cdd:COG0109  245 IYLVVALVLGAWFLYLAVRLYRRPDRKWARKLFKFSILYLTLLFLALLVDHLLLL 299
PT_UbiA_Cox10 cd13957
Protoheme IX farnesyltransferase; Protoheme IX farnesyltransferase (also called heme O ...
 9-285 6.81e-96

Protoheme IX farnesyltransferase; Protoheme IX farnesyltransferase (also called heme O synthase, heme A:farnesyltransferase, cytochrome c oxidase subunit X [Cox10]) converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of the heme B porphyrin ring with a hydroxyethyl farnesyl side group. It is localized at the mitochondrial inner membrane. Eukaryotic Cox10 is important for the maturation of the heme A prosthetic group of cytochrome c oxidase (COX), the terminal component of the mitochondrial respiratory chain, that catalyzes the electron transfer from reduced cytochrome c to oxygen. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.


Pssm-ID: 260120  Cd Length: 271  Bit Score: 283.95  E-value: 6.81e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   9 WDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRP 88
Cdd:cd13957    1 LELTKPRITLLVLLTALAGYLLAPGGVPDLLLL---LLTLLGTALVSASANALNQYIERDIDAKMKRTRNRPLPSGRISP 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  89 WQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTTADW 168
Cdd:cd13957   78 KHALIFGLVLGILGLALLALFVNPLTALLGLLGIFLYVFVYTPLKKRTTPLNTVIGGIAGAIPPLIGWAAATGSLDLGAW 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 169 inasILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGVFYLGGAVV 248
Cdd:cd13957  158 ----LLFLILFLWQPPHFWALAILYRDDYARAGIPMLPVVKGERRTKRQILLYTLLLVPLSLLLYLLGLTGWIYLVVALL 233

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 492842950 249 LNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFA 285
Cdd:cd13957  234 LGLYFLYLAIKLYRSPDDKWARKLFFASLIYLPLLFL 270
cyoE_ctaB TIGR01473
protoheme IX farnesyltransferase; This model describes protoheme IX farnesyltransferase, also ...
 6-290 4.42e-83

protoheme IX farnesyltransferase; This model describes protoheme IX farnesyltransferase, also called heme O synthase, an enzyme that creates an intermediate in the biosynthesis of heme A. Prior to the description of its enzymatic function, this protein was often called a cytochrome o ubiquinol oxidase assembly factor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 273645  Cd Length: 280  Bit Score: 251.40  E-value: 4.42e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950    6 RDYWDLTKPKVVALIVFTALVGMFLAipGVPTWAQVRAGILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGK 85
Cdd:TIGR01473   1 KDYLQLTKPRIISLLLITAFAGMWLA--PGGALVNPPLLLLTLLGTTLAAASANAFNMYIDRDIDKKMKRTRNRPLVTGR 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   86 VRPWQVMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTt 165
Cdd:TIGR01473  79 ISPREALAFGLLLGVLGVAILAAFVNPLAALLGLFGIFFYVIVYTIWLKRRTPQNTVIGGFAGAVPPLIGWAAVTGSIS- 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  166 adwINASILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGVFYLGG 245
Cdd:TIGR01473 158 ---LGAWLLFAIIFLWQPPHFWALALKYKDDYRAAGIPMLPVVKGERITKRQIALYTAALLPVSLLLAFLGGTGWLYLIV 234

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 492842950  246 AVVLNAVFLWYAWRM-LDPPDELFSMKMFGYSIVYLMALFAFLMVD 290
Cdd:TIGR01473 235 ATLLGALFLYLAFKFyRDPTDRKKARKLFKFSLIYLALLFVALLID 280
UbiA pfam01040
UbiA prenyltransferase family;
20-265 4.83e-39

UbiA prenyltransferase family;


Pssm-ID: 460038 [Multi-domain]  Cd Length: 250  Bit Score: 137.36  E-value: 4.83e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   20 IVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRPWQVMVFASVLI 99
Cdd:pfam01040   1 LLIPALAGLALAAGGVPDLLLL---LLALLGTVLARAAANALNDYYDRDIDAIMPRTPNRPLPSGRISPREALIFALVLL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  100 AISMTMLVvWVNVITAVLTFASMIGYaVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPttadWINASILVLIIF 179
Cdd:pfam01040  78 ALGLLLLL-LLNPLTALLGLAALLLY-VLYTLRLKRRTLLGQLVGGLAFGLPPLLGWAAVTGSL----SPLALLLALALF 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  180 IWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVtLLPVAVGMSGVFYLGGAVVLNAVFLWYAWR 259
Cdd:pfam01040 152 LWTWAIALANDLRDREDDRKAGIKTLPVVLGRKAARILLALLLAVALLL-LLLLLLLLLGGLYLLLALLLAALALLYAAR 230


                  ....*.
gi 492842950  260 MLDPPD 265
Cdd:pfam01040 231 LLRLRD 236
PLN02776 PLN02776
prenyltransferase
 11-289 7.20e-29

prenyltransferase


Pssm-ID: 215415  Cd Length: 341  Bit Score: 112.92  E-value: 7.20e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  11 LTKPKVVALIVFTALVGMFLAIPGVPTWAQVRAGILGFVgiwLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRPWQ 90
Cdd:PLN02776   1 LSKARLSALVVATSGAGFVLGSGEAIDLPGLGWTCAGTM---LCAASANTLNQVFEVKNDSKMKRTMRRPLPSGRISVPH 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  91 VMVFASVLIAISMTMLVVWVNVITAVLTFASMIGYAVIYTvYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTTADWIN 170
Cdd:PLN02776  78 AVAWAVVVGAAGVALLAYKTNMLTAGLGAGNILLYAFVYT-PLKQIHPANTWVGAVVGAIPPLMGWAAASGQLDAGAMVL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 171 ASILvliiFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGV-PHTRKQILIYTIVLAIVTLLPVAVGMSGVFYLGGAVVL 249
Cdd:PLN02776 157 AAAL----YFWQMPHFMALAYMCRDDYAAGGYRMLSLADATgRRTALVALRNCLYLAPLGFLAYDWGVTSSPFALEAALL 232

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 492842950 250 NAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMV 289
Cdd:PLN02776 233 TAYLAASAASFYREPTNANARKMFHGSLLYLPAFMALLLL 272
UbiA COG0382
4-hydroxybenzoate polyprenyltransferase [Coenzyme transport and metabolism]; 4-hydroxybenzoate ...
 6-287 5.84e-18

4-hydroxybenzoate polyprenyltransferase [Coenzyme transport and metabolism]; 4-hydroxybenzoate polyprenyltransferase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440151  Cd Length: 280  Bit Score: 81.81  E-value: 5.84e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   6 RDYWDLT---KPKVVALIVFTALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLV 82
Cdd:COG0382    1 RAYLRLLrldRPIGILLLLWPTLWALFLAAGGLPDLLLL---LLAVLGTVLMRSAGYVINDYFDREIDRINERKPNRPLA 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  83 VGKVRPWQVMVFASVLIAISMtMLVVWVNVITAVLTFASMIGyAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGL 162
Cdd:COG0382   78 SGRISLREALLLAIVLLLLAL-ALALLLNPLTFLLALAALAL-AWAYSLFLKRFTLLGNLVLGLLFGLGILMGFAAVTGS 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 163 PTTADWinasILVLIIFIWTpphfWALAIF----RRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMS 238
Cdd:COG0382  156 LPLSAW----LLALAAFLWT----LAYDTIydleDREGDRKIGIKTLAILFGVRDALIIAGVLYALAVLLLLLLGLLAGL 227

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 492842950 239 GVFYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFL 287
Cdd:COG0382  228 GLLYLLGLLAALLLLYLSQLWLLRPRKKDPARALKLFKLNMLLGLLLFL 276
PT_UbiA_COQ2 cd13959
4-Hydroxybenzoate polyprenyltransferase; 4-Hydroxybenzoate polyprenyltransferase, also known ...
 11-290 6.60e-16

4-Hydroxybenzoate polyprenyltransferase; 4-Hydroxybenzoate polyprenyltransferase, also known as Coq2, catalyzes the prenylation of p-hydroxybenzoate with an all-trans polyprenyl group, an important step in ubiquinone (CoQ) biosynthesis. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.


Pssm-ID: 260122 [Multi-domain]  Cd Length: 272  Bit Score: 75.97  E-value: 6.60e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  11 LTKPKVVALIVFTALVGMFLAIPGVPTWAqVRAGILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRPWQ 90
Cdd:cd13959    3 LDKPIGTLLLLPPALWGLLLAAGGLPLPL-LKLLLLFLLGAFLMRSAGCTINDIADRDIDAKVPRTKNRPLASGAISVKE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  91 VMVFASVLIAISmTMLVVWVNVITAVLTFASMIGyAVIYTvYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPttadWIN 170
Cdd:cd13959   82 ALLFLAVQLLLG-LALLLQLNPLTILLSPIALLL-VLIYP-LMKRFTYWPQLVLGLAFGWGPLMGWAAVTGSL----PLP 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 171 ASILVLIIFIWTpphfwalAIFR-------RADYAKAAIPMLPVTHGVpHTRKQI-LIYTIVLAIVTLLPVAVGMSGVFY 242
Cdd:cd13959  155 ALLLYLAVIFWT-------AGYDtiyahqdREDDRKIGVKSTAVLFGD-RTKLILaLLLHLFVALLLLAGGLAGLGWPYY 226

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 492842950 243 LGGAVVlnAVFLWYAWRMLDPPDELFSMKMFGYSIVYLMALFAFLMVD 290
Cdd:cd13959  227 LGLGAA--AHLLWQEHRLDLPDPLRSCLAFFLSNGWVGLLLFAGLLLD 272
PT_UbiA cd13956
UbiA family of prenyltransferases (PTases); Many characterized members of the UbiA ...
 17-287 2.42e-11

UbiA family of prenyltransferases (PTases); Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.


Pssm-ID: 260119 [Multi-domain]  Cd Length: 271  Bit Score: 62.75  E-value: 2.42e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  17 VALIVFTALVGMFLAIPGVPTWAQVRAGILGFVGIWLAASAAAAINQLLDAKIDAqmARTSWRPLVVGKVRPWQVMVFAS 96
Cdd:cd13956    7 YTLLYVLAPALAGAALAGAFAGPLPALLLLALLAVFLGAGAGYALNDYTDRELDA--INKPDRPLPSGRLSPRQALAFAA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  97 VLIAISMtMLVVWVNVITAVLTFASMIGyAVIYTVYLKRATSQNIVIGGLAGATPPMLGWAAVTGLPTTADWInasILVL 176
Cdd:cd13956   85 ALLLVGL-ALALALGPLALLLLLAGLLL-GLAYSLGLKRLKLGGWGVLGYATGLALLPGLGAVAAGGLVPLAL---LLAL 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 177 IIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILI-YTIVLAIVTLLPVAVGMSGVFYLGGAVVLNAVFLW 255
Cdd:cd13956  160 VFLLLGLGINLYNDLPDVEGDRAAGIRTLPVRLGPRRARRLAAGlLLAALILVVLLAVAGLLGPLALLALLAVALLALRA 239

                        250       260       270
                 ....*....|....*....|....*....|..
gi 492842950 256 YAWRMLDPPDELFSMKMFGYSIVYLMALFAFL 287
Cdd:cd13956  240 RFARADRLPALPRGFLLLAVYRLLLFAALLLA 271
ubiA PRK12882
prenyltransferase; Reviewed
 4-287 6.74e-08

prenyltransferase; Reviewed


Pssm-ID: 183811  Cd Length: 276  Bit Score: 52.67  E-value: 6.74e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   4 SARDYWDLTKPKVVALIVFTALVGMFLAIPGVPtwAQVRAGILGFVgIWLAASAAAAINQLLDAKIDAqMARTSwRPLVV 83
Cdd:PRK12882   3 TVRGYLELTRPVNAVVAGVAAFIGAFIAGGILS--SPSLTGLAFAA-VFLATGAGNAINDYFDREIDR-INRPD-RPIPS 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  84 GKVRPWQVMVFASVLIAISmTMLVVWVNVITAVLT-FASMIgyAVIYTVYLKR-ATSQNIVIGGLAGATppMLGWAAVTG 161
Cdd:PRK12882  78 GAVSPRGALAFSILLFAAG-VALAFLLPPLCLAIAlFNSLL--LVLYAETLKGtPGLGNASVAYLTGST--FLFGGAAVG 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 162 LPTTADwinasilVLIIFIWTpphfwALAIFRR---------ADYAKAAIPMLPVTHGVphtRKQILIYTIVLAI---VT 229
Cdd:PRK12882 153 TEGLLA-------LLVLFALA-----ALATLAReiikdvediEGDRAEGARTLPILIGV---RKALYVAAAFLLVavaAS 217

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 492842950 230 LLPVAVGMSGVFYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIvyLMALFAFL 287
Cdd:PRK12882 218 PLPYLLSTFGLWYLVLVAPADLVMLAAAYRSLKKTDPTASQKLLKYGM--FLALAAFI 273
PT_UbiA_DGGGPS cd13961
Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Digeranylgeranylglyceryl phosphate ...
 8-287 1.83e-07

Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Digeranylgeranylglyceryl phosphate synthase (DGGGPS) transfers a geranylgeranyl group from geranylgeranyl diphosphate to (S)-3-O-geranylgeranylglyceryl phosphate to form (S)-2,3-di-O-geranylgeranylglyceryl phosphate, as part of the isoprenoid ether lipid biosynthesis. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.


Pssm-ID: 260124  Cd Length: 270  Bit Score: 51.35  E-value: 1.83e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   8 YWDLTKPKVVALIVFTALVGMFLAIPGVPTWAQVRAgILGFVGIWLAASAAAAINQLLDAKIDaqMARTSWRPLVVGKVR 87
Cdd:cd13961    2 YLELIRPPNLLMAALAQYLGALFALGPLLSLNDLEL-LLLFLSVFLIAAAGYIINDYFDVEID--RINKPDRPIPSGRIS 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  88 PWQVMVFASVLIAISMtMLVVWVNVITAVLTFASMIGyAVIYTVYLKRAT-SQNIVIGGLAGAtPPMLGWAAVTGLptta 166
Cdd:cd13961   79 RREALILSILLNALGL-ILAFLLSPLALLIALLNSLL-LWLYSHKLKRTPlIGNLLVALLTGL-PFLFGGLAAGNL---- 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 167 dwiNASILVLIIFIWtpphfwaLAIFRR----------ADYAKAAIpMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVG 236
Cdd:cd13961  152 ---LLIILLLALFAF-------LITLGReivkdiedveGDRAEGAR-TLPIVYGIKKAKKIAALLLLLAILLSPLPYLLG 220

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 492842950 237 MSGVFYLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYsIVYLMALFAFL 287
Cdd:cd13961  221 GLGILYLILIIIADLLFLYSAIRLAKSPKDYSKLSKLLK-LAMLLGLLAFL 270
ubiA PRK12884
prenyltransferase; Reviewed
 5-288 2.58e-05

prenyltransferase; Reviewed


Pssm-ID: 183812  Cd Length: 279  Bit Score: 44.95  E-value: 2.58e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950   5 ARDYWDLTKPKVVALIVFTALVGMFLAIPGVPTWAqvraGILGFVGIWLAASAAAAINQLLDAKIDAQMARTswRPLVVG 84
Cdd:PRK12884   4 MKAYLELLRPEHGLMAGIAVVLGAIIALGGLPLDE----ALLGFLTAFFASGSANALNDYFDYEVDRINRPD--RPIPSG 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  85 KVRPWQVMVFASVLIAISMTM--LVVWVNVITAVLtfasMIGYAVIYTVYLKRA-TSQNIVIGGLAGATPPMLGWAAvtG 161
Cdd:PRK12884  78 RISRREALLLAILLFILGLIAayLISPLAFLVVIL----VSVLGILYNWKLKEYgLIGNLYVAFLTGMTFIFGGIAV--G 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 162 LPTTADWinasILVLIIFIWTPPHFWALAIFRRADYAKAAIPMLPVTHGVPHTRKQILIYTIVLAIVTLLPVAVGMSGVF 241
Cdd:PRK12884 152 ELNEAVI----LLAAMAFLMTLGREIMKDIEDVEGDRLRGARTLAILYGEKIAGRIAAALFILAVLLSPLPYLFGIFNIL 227

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 492842950 242 YLGGAVVLNAVFLWYAWRMLDPPDELFSMKMFGYSIV-YLMALFAFLM 288
Cdd:PRK12884 228 YLAPVLVADLIFLYSAYSLLRSQDRETIRKVRKITLTaMLLALVAFAL 275
ubiA PRK12888
4-hydroxybenzoate octaprenyltransferase;
24-265 5.18e-05

4-hydroxybenzoate octaprenyltransferase;


Pssm-ID: 183814  Cd Length: 284  Bit Score: 43.94  E-value: 5.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  24 ALVGMFLAiPGVPTWAQVRAGILGFVGiwlAASAAAAINQLLDAKIDAQMARTSWRPLVVGKV--RPWQVMVFASVLIAI 101
Cdd:PRK12888  25 ALTAMFAS-DGSVHWADLLLVTVAMVG---ARTFAMAANRIIDREIDARNPRTAGRELVTGAVsvRTAWTGALVALAVFL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 102 SMTMLVVWVNVITAVLTFASMIGYAviytvYLKRATSQNIVIGGLAGATPPMLGWAAVTGlptTADWiNASILVLIIFIW 181
Cdd:PRK12888 101 GAAALLNPLCLALAPLAVAPLVVYP-----YAKRFTNFPHAILGLAQAVGPVGAWIAVTG---TWSW-PAVLLGLAVGLW 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 182 TPPHFWALAIFRRADYAKAAIPMLPVTHGVPHT-RKQILIYTIVLAIVTLLPVAVGMSGVFYLGgaVVLNAVFLWYAWRM 260
Cdd:PRK12888 172 IGGFDLIYACQDAEVDRRIGVRSVPARFGVRAAlWASRVAHVVTFALFVWFGLAVGFGALWWIG--LAITAGAFAYEHAI 249


                 ....*
gi 492842950 261 LDPPD 265
Cdd:PRK12888 250 VSPTD 254
ubiA PRK13106
prenyltransferase; Reviewed
 24-138 1.84e-04

prenyltransferase; Reviewed


Pssm-ID: 237283  Cd Length: 300  Bit Score: 42.41  E-value: 1.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  24 ALVGMFLAIPGVPTWAQVragILGFVGIWLAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVR---PWQVMVFASVLIA 100
Cdd:PRK13106  34 AYLGAFVAIKGIPPISTL---ILIFLALFFLRTAGMTNDNLADLEIDAKNPRTKNRPLVTGAIKiseAKALITAGLILFF 110

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 492842950 101 ISmtmlVVWVNVITAVLtfaSMIGYAVIYTV-YLKRATS 138
Cdd:PRK13106 111 AS----AYLVNRWALLL---SPIVALIAMSYpYMKRYTA 142
ubiA PRK12886
prenyltransferase; Reviewed
 24-293 5.58e-04

prenyltransferase; Reviewed


Pssm-ID: 237247  Cd Length: 291  Bit Score: 40.83  E-value: 5.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  24 ALVGMFLAIPGVPTWAQVRAGILGFVGiwlAASAAAAINQLLDAKIDAQMARTSWRPLVVGKVRPWQVMVFasVLIAISM 103
Cdd:PRK12886  27 AGIGAVLAALGLPGASQLDWILMAMVG---ARTAAMGFNRLIDAEIDARNPRTAGRAIPAGLISKGSAILF--IVLSSLL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 104 TMLVVW-VNVITAVLTFASmIGYAVIYTvYLKRATSQNIVIGGLAGATPPMLGWAAVTGlptTADWInASILVLIIFIWT 182
Cdd:PRK12886 102 MLFAAWfLNPLCLYLSPPA-LFFLLLYS-YCKRFTALAHVVLGFCLALAPLGAWIAIRG---TIELP-AILLGLAVLFWV 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950 183 PPhFWALAIFRRADY-AKAAIPMLPVTHGVPHTRK-QILIYTIVLAIVTLLPVAVGMsGVFYLGGAVVLNAVFLWYAWRM 260
Cdd:PRK12886 176 AG-FDILYALQDLEFdRKEGLHSIPAKLGVNGSLWiARVFHLLMIGFLFALGISAGL-GPWFLAGLAVTGILLLYEHWLL 253

                        250       260       270
                 ....*....|....*....|....*....|...
gi 492842950 261 LDPPDELFSMKMFGYSIVYLMALFAFLMVDHLL 293
Cdd:PRK12886 254 RGGDLTRLDAAFFNMNGYISVTLFAATLFDRLF 286
PLN02809 PLN02809
4-hydroxybenzoate nonaprenyltransferase
 61-161 2.16e-03

4-hydroxybenzoate nonaprenyltransferase


Pssm-ID: 178405  Cd Length: 289  Bit Score: 38.90  E-value: 2.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 492842950  61 INQLLDAKIDAQMARTSWRPLVVGKVRPWQVMVFASVLIAISMTMLVVwVNVITAVLTFASMigyAVIYTVYL-KRATSQ 139
Cdd:PLN02809  64 INDLLDRDIDKKVERTKLRPIASGALTPFQGVGFLGAQLLLGLGILLQ-LNNYSRILGASSL---LLVFTYPLmKRFTFW 139

                         90       100
                 ....*....|....*....|..
gi 492842950 140 NIVIGGLAGATPPMLGWAAVTG 161
Cdd:PLN02809 140 PQAFLGLTFNWGALLGWAAVKG 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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