NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|493223921|ref|WP_006203013|]
View 

carboxyl transferase domain-containing protein [Brucella suis]

Protein Classification

carboxyltransferase domain-containing protein( domain architecture ID 1001328)

carboxyltransferase domain-containing protein catalyzes the transcarboxylation from biotin to an acyl-CoA acceptor molecule; similar to methylcrotonyl-CoA carboxylase subunit beta

CATH:  3.90.226.10
Gene Ontology:  GO:0016740|GO:0009374
PubMed:  8102604

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Carboxyl_trans super family cl47203
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
3-535 0e+00

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


The actual alignment was detected with superfamily member PLN02820:

Pssm-ID: 481543 [Multi-domain]  Cd Length: 569  Bit Score: 878.76  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921   3 VLKSEISTRSASFEANRKAMLAAIDMVAEASRIAIDGGGEKARDRHVSRGKLLPRERVAQLLDPGSPFLELGLTAAHGTY 82
Cdd:PLN02820  31 VLPDGVDRNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELY 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  83 GGAAPAAGIITGIGRVSGRECMIVCNDATVKGGTYYPMTVKKHLRAQEIAGENRLPCIYLVDSGGANLPNQDEVFPDRDH 162
Cdd:PLN02820 111 GEDLPSGGIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDH 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 163 FGRIFYNQAQMSAAGIPQVAVVMGSCTAGGAYVPAMSDETVIVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLS 242
Cdd:PLN02820 191 FGRIFYNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVS 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 243 GVADHLANDDAHALQIARAIAANL--ASEKRSFIPRGDGAA----PLYDPEELLGVVSADTRIPYDVREVIARLVDGSDF 316
Cdd:PLN02820 271 GVSDHFAQDELHALAIGRNIVKNLhlAAKQGMENTLGSKNPeykePLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEF 350
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 317 DEFKARYGTTLVCGFASVYGMPVGIIANNGVLFSEAALKGAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAK 396
Cdd:PLN02820 351 DEFKKNYGTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAK 430
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 397 LVTAVATANVPKITMLIGASYGAGNYGMAGRAYSPRFLWTWPNSRIAVMGGEQAAGVLATVKRDGIERTGGTWSAEEEAE 476
Cdd:PLN02820 431 MVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEA 510
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 493223921 477 FKRPTLEMFERQSHPLYASARLWDDGIVDPRKSREVLGLSLSATLNAPVEPTRFGIFRM 535
Cdd:PLN02820 511 FKAKTVEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
 
Name Accession Description Interval E-value
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
3-535 0e+00

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 878.76  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921   3 VLKSEISTRSASFEANRKAMLAAIDMVAEASRIAIDGGGEKARDRHVSRGKLLPRERVAQLLDPGSPFLELGLTAAHGTY 82
Cdd:PLN02820  31 VLPDGVDRNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELY 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  83 GGAAPAAGIITGIGRVSGRECMIVCNDATVKGGTYYPMTVKKHLRAQEIAGENRLPCIYLVDSGGANLPNQDEVFPDRDH 162
Cdd:PLN02820 111 GEDLPSGGIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDH 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 163 FGRIFYNQAQMSAAGIPQVAVVMGSCTAGGAYVPAMSDETVIVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLS 242
Cdd:PLN02820 191 FGRIFYNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVS 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 243 GVADHLANDDAHALQIARAIAANL--ASEKRSFIPRGDGAA----PLYDPEELLGVVSADTRIPYDVREVIARLVDGSDF 316
Cdd:PLN02820 271 GVSDHFAQDELHALAIGRNIVKNLhlAAKQGMENTLGSKNPeykePLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEF 350
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 317 DEFKARYGTTLVCGFASVYGMPVGIIANNGVLFSEAALKGAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAK 396
Cdd:PLN02820 351 DEFKKNYGTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAK 430
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 397 LVTAVATANVPKITMLIGASYGAGNYGMAGRAYSPRFLWTWPNSRIAVMGGEQAAGVLATVKRDGIERTGGTWSAEEEAE 476
Cdd:PLN02820 431 MVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEA 510
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 493223921 477 FKRPTLEMFERQSHPLYASARLWDDGIVDPRKSREVLGLSLSATLNAPVEPTRFGIFRM 535
Cdd:PLN02820 511 FKAKTVEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
21-533 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 796.93  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  21 AMLAAIDMVAEASRIAIDGGGEKARDRHVSRGKLLPRERVAQLLDPGSpFLELGLTAAHGTYG--GAAPAAGIITGIGRV 98
Cdd:COG4799    1 AMRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYDddDRVPGDGVVTGIGTV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  99 SGRECMIVCNDATVKGGTYYPMTVKKHLRAQEIAGENRLPCIYLVDSGGANLPNQDEVFpdrDHFGRIFYNQAqMSAAGI 178
Cdd:COG4799   80 DGRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESF---AGYGRIFYRNA-RSSGGI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 179 PQVAVVMGSCTAGGAYVPAMSDETVIVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLSGVADHLANDDAHALQI 258
Cdd:COG4799  156 PQISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALAL 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 259 ARAIAANLASEKRSFIPRGDGAAPLYDPEELLGVVSADTRIPYDVREVIARLVDGSDFDEFKARYGTTLVCGFASVYGMP 338
Cdd:COG4799  236 ARRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRP 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 339 VGIIANN-----GVLFSEAALKGAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAKLVTAVATANVPKITMLI 413
Cdd:COG4799  316 VGIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVIL 395
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 414 GASYGAGNYGMAGRAYSPRFLWTWPNSRIAVMGGEQAAGVLATVKRDgiertggtwSAEEEAEFKRPTLEMFERQSHPLY 493
Cdd:COG4799  396 RKAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELA---------AAEDPEALRAELIAEYEEQANPYY 466
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 493223921 494 ASARLWDDGIVDPRKSREVLGLSLSATLNAPVE--PTRFGIF 533
Cdd:COG4799  467 AAARGWIDDVIDPRDTRRVLARALEAAANKPEErpPKKHGVI 508
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
47-526 2.80e-174

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 500.63  E-value: 2.80e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921   47 RHVSRGKLLPRERVAQLLDPGSpFLELGLTAAHGTYGGA---APAAGIITGIGRVSGRECMIVCNDATVKGGTYYPMTVK 123
Cdd:pfam01039   1 PEHPRGKLTARERIDLLLDPGS-FGELEDLFFHRATEFGrkrIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGPAKGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  124 KHLRAQEIAGENRLPCIYLVDSGGANlpnQDEVFPDRDHFGRIFYNQAQMSAaGIPQVAVVMGSCTAGGAYVPAMSDETV 203
Cdd:pfam01039  80 KILRAMEIAIKTGLPLIGINDSGGAR---IQEGVENLRGSGKIFGRNSLASG-VIPQISLIMGPCAGGGAYLPALGDFVI 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  204 IVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLSGVADHLANDDAHALQIARAIAANL---ASEKRSFIPRGDGA 280
Cdd:pfam01039 156 MVEGTSPMFLTGPPVIKKVTGEEVTSEELGGATQHMTISGVSHLTALDDEDALELIRKWLSYLpkpAPNNREPVPIVPTK 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  281 APLYDPEELLGVVSADTRIPYDVREVIARLVDGSDFDEFKARYGTTLVCGFASVYGMPVGIIANN-----GVLFSEAALK 355
Cdd:pfam01039 236 DPPDRDAPLVSIVPDDPKKPYDVREVIAGIVDEGEFFEIKPGYAKTVVTGFARLGGIPVGVVANQprvgaGVLFPDSADK 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  356 GAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAKLVTAVATANVPKITMLIGASYGAGNYGMAGRAYSPRFLW 435
Cdd:pfam01039 316 AARFIRDCDAFNLPLVILADVPGFLPGQRQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYVVMDSKINGADINF 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  436 TWPNSRIAVMGGEQAAGVLATVKRDGIERTGgtwsaEEEAEFKRPTLEMFERQ-SHPLYASARLWDDGIVDPRKSREVLG 514
Cdd:pfam01039 396 AWPTARIAVMGPEGAVEIKFRKEKAAAEMRG-----KDLAATRKQKIAEYEEElSPPYVAAARGFADAVIDPGRTRAKLV 470
                         490
                  ....*....|..
gi 493223921  515 LSLSATLNAPVE 526
Cdd:pfam01039 471 IALAALWTKPRF 482
 
Name Accession Description Interval E-value
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
3-535 0e+00

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 878.76  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921   3 VLKSEISTRSASFEANRKAMLAAIDMVAEASRIAIDGGGEKARDRHVSRGKLLPRERVAQLLDPGSPFLELGLTAAHGTY 82
Cdd:PLN02820  31 VLPDGVDRNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELY 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  83 GGAAPAAGIITGIGRVSGRECMIVCNDATVKGGTYYPMTVKKHLRAQEIAGENRLPCIYLVDSGGANLPNQDEVFPDRDH 162
Cdd:PLN02820 111 GEDLPSGGIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDH 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 163 FGRIFYNQAQMSAAGIPQVAVVMGSCTAGGAYVPAMSDETVIVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLS 242
Cdd:PLN02820 191 FGRIFYNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVS 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 243 GVADHLANDDAHALQIARAIAANL--ASEKRSFIPRGDGAA----PLYDPEELLGVVSADTRIPYDVREVIARLVDGSDF 316
Cdd:PLN02820 271 GVSDHFAQDELHALAIGRNIVKNLhlAAKQGMENTLGSKNPeykePLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEF 350
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 317 DEFKARYGTTLVCGFASVYGMPVGIIANNGVLFSEAALKGAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAK 396
Cdd:PLN02820 351 DEFKKNYGTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAK 430
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 397 LVTAVATANVPKITMLIGASYGAGNYGMAGRAYSPRFLWTWPNSRIAVMGGEQAAGVLATVKRDGIERTGGTWSAEEEAE 476
Cdd:PLN02820 431 MVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEA 510
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 493223921 477 FKRPTLEMFERQSHPLYASARLWDDGIVDPRKSREVLGLSLSATLNAPVEPTRFGIFRM 535
Cdd:PLN02820 511 FKAKTVEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
21-533 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 796.93  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  21 AMLAAIDMVAEASRIAIDGGGEKARDRHVSRGKLLPRERVAQLLDPGSpFLELGLTAAHGTYG--GAAPAAGIITGIGRV 98
Cdd:COG4799    1 AMRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYDddDRVPGDGVVTGIGTV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  99 SGRECMIVCNDATVKGGTYYPMTVKKHLRAQEIAGENRLPCIYLVDSGGANLPNQDEVFpdrDHFGRIFYNQAqMSAAGI 178
Cdd:COG4799   80 DGRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESF---AGYGRIFYRNA-RSSGGI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 179 PQVAVVMGSCTAGGAYVPAMSDETVIVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLSGVADHLANDDAHALQI 258
Cdd:COG4799  156 PQISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALAL 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 259 ARAIAANLASEKRSFIPRGDGAAPLYDPEELLGVVSADTRIPYDVREVIARLVDGSDFDEFKARYGTTLVCGFASVYGMP 338
Cdd:COG4799  236 ARRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRP 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 339 VGIIANN-----GVLFSEAALKGAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAKLVTAVATANVPKITMLI 413
Cdd:COG4799  316 VGIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVIL 395
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921 414 GASYGAGNYGMAGRAYSPRFLWTWPNSRIAVMGGEQAAGVLATVKRDgiertggtwSAEEEAEFKRPTLEMFERQSHPLY 493
Cdd:COG4799  396 RKAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELA---------AAEDPEALRAELIAEYEEQANPYY 466
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 493223921 494 ASARLWDDGIVDPRKSREVLGLSLSATLNAPVE--PTRFGIF 533
Cdd:COG4799  467 AAARGWIDDVIDPRDTRRVLARALEAAANKPEErpPKKHGVI 508
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
47-526 2.80e-174

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 500.63  E-value: 2.80e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921   47 RHVSRGKLLPRERVAQLLDPGSpFLELGLTAAHGTYGGA---APAAGIITGIGRVSGRECMIVCNDATVKGGTYYPMTVK 123
Cdd:pfam01039   1 PEHPRGKLTARERIDLLLDPGS-FGELEDLFFHRATEFGrkrIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGPAKGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  124 KHLRAQEIAGENRLPCIYLVDSGGANlpnQDEVFPDRDHFGRIFYNQAQMSAaGIPQVAVVMGSCTAGGAYVPAMSDETV 203
Cdd:pfam01039  80 KILRAMEIAIKTGLPLIGINDSGGAR---IQEGVENLRGSGKIFGRNSLASG-VIPQISLIMGPCAGGGAYLPALGDFVI 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  204 IVRGQGTIFLAGPPLVKAATGEVVSAEDLGGGDVHTRLSGVADHLANDDAHALQIARAIAANL---ASEKRSFIPRGDGA 280
Cdd:pfam01039 156 MVEGTSPMFLTGPPVIKKVTGEEVTSEELGGATQHMTISGVSHLTALDDEDALELIRKWLSYLpkpAPNNREPVPIVPTK 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  281 APLYDPEELLGVVSADTRIPYDVREVIARLVDGSDFDEFKARYGTTLVCGFASVYGMPVGIIANN-----GVLFSEAALK 355
Cdd:pfam01039 236 DPPDRDAPLVSIVPDDPKKPYDVREVIAGIVDEGEFFEIKPGYAKTVVTGFARLGGIPVGVVANQprvgaGVLFPDSADK 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  356 GAHFIELCCQRNIPLVFLQNITGFMVGRKYEAEGIAKHGAKLVTAVATANVPKITMLIGASYGAGNYGMAGRAYSPRFLW 435
Cdd:pfam01039 316 AARFIRDCDAFNLPLVILADVPGFLPGQRQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYVVMDSKINGADINF 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493223921  436 TWPNSRIAVMGGEQAAGVLATVKRDGIERTGgtwsaEEEAEFKRPTLEMFERQ-SHPLYASARLWDDGIVDPRKSREVLG 514
Cdd:pfam01039 396 AWPTARIAVMGPEGAVEIKFRKEKAAAEMRG-----KDLAATRKQKIAEYEEElSPPYVAAARGFADAVIDPGRTRAKLV 470
                         490
                  ....*....|..
gi 493223921  515 LSLSATLNAPVE 526
Cdd:pfam01039 471 IALAALWTKPRF 482
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH