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Conserved domains on  [gi|493781941|ref|WP_006730326|]
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glycerol-3-phosphate acyltransferase [Lactobacillus iners]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK00220 super family cl42189
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-201 1.04e-55

glycerol-3-phosphate 1-O-acyltransferase PlsY;


The actual alignment was detected with superfamily member PRK14411:

Pssm-ID: 478012  Cd Length: 204  Bit Score: 175.35  E-value: 1.04e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK14411   1 MARFWATLIGYVFGNFLTAMIVGKIFLHKDPTKYGSGNPGTANMGAVFGKKWGILTCIGDLLKTLIALFIVYFIYHGHLN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFvIYSNC 160
Cdd:PRK14411  81 IAYAGLGVVLGHCFPIWNHFKGGKGVAVTAQVAVFYDWRAGLITLLIALVLTAIMQNLTIPPLVFMLLFSIYTF-WNNQE 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 493781941 161 AGILFFIGWCVMLYKFRNDLVAYCKGKGKRTDILFLFKRVL 201
Cdd:PRK14411 160 AGLVFLIITLIMIFKFRKDIVDFFTGHGKRVDILYTIKKKL 200
 
Name Accession Description Interval E-value
PRK14411 PRK14411
membrane protein; Provisional
 1-201 1.04e-55

membrane protein; Provisional


Pssm-ID: 184663  Cd Length: 204  Bit Score: 175.35  E-value: 1.04e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK14411   1 MARFWATLIGYVFGNFLTAMIVGKIFLHKDPTKYGSGNPGTANMGAVFGKKWGILTCIGDLLKTLIALFIVYFIYHGHLN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFvIYSNC 160
Cdd:PRK14411  81 IAYAGLGVVLGHCFPIWNHFKGGKGVAVTAQVAVFYDWRAGLITLLIALVLTAIMQNLTIPPLVFMLLFSIYTF-WNNQE 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 493781941 161 AGILFFIGWCVMLYKFRNDLVAYCKGKGKRTDILFLFKRVL 201
Cdd:PRK14411 160 AGLVFLIITLIMIFKFRKDIVDFFTGHGKRVDILYTIKKKL 200
PlsY COG0344
Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid ...
 1-177 2.32e-36

Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid transport and metabolism];


Pssm-ID: 440113 [Multi-domain]  Cd Length: 194  Bit Score: 125.59  E-value: 2.32e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:COG0344    2 MLLLLLLLLAYLLGSIPFGYLVGKLFGGIDIREHGSGNIGATNVLRVLGKKAGLLVLLLDALKGALAVLLARLLGGGPLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNC 160
Cdd:COG0344   82 LLLAGLAAVLGHNFPVFLGFKGGKGVATALGVLLALSPLVGLIALAVWLLVLLLTRYVSLGSLVAALAAPILALLLGGPL 161

                        170
                 ....*....|....*...
gi 493781941 161 A-GILFFIGWCVMLYKFR 177
Cdd:COG0344  162 AlLLLALLLALLVIYRHR 179
G3P_acyltransf pfam02660
Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl ...
 9-181 1.16e-33

Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate to form lysophosphatidic acid.


Pssm-ID: 460641 [Multi-domain]  Cd Length: 174  Bit Score: 117.98  E-value: 1.16e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941    9 VGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHISLAYCGLGL 88
Cdd:pfam02660   1 IAYLLGSIPFGYLIGKLLKGIDIREYGSGNPGATNVLRVLGKKAGILVLLLDALKGVLAVLLARLLFGGLLLELLAGLAA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   89 MLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNCAGILFFIG 168
Cdd:pfam02660  81 VLGHNFPVFLGFKGGKGVATTLGVLLALSPWDALIALAVFLLVLALTRYVSLGSLVAALLLPILLLLFGLPLVIFALLLA 160

                         170
                  ....*....|...
gi 493781941  169 wCVMLYKFRNDLV 181
Cdd:pfam02660 161 -LLVIWRHRENIK 172
TIGR00023 TIGR00023
acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of ...
 1-177 3.00e-22

acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of acylphosphate:glycerol 3-phosphate acyltransferase, and integral membrane protein about 200 amino acids in length, called PlsY in Streptococcus pneumoniae, YneS in Bacillus subtilis, and YgiH in E. coli. It is found in a single copy in a large number of bacteria, including the Mycoplasmas but not Mycobacteria or spirochetes, for example. Its partner is PlsX (see TIGR00182), and the pair can replace PlsB for synthesizing 1-acylglycerol-3-phosphate. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272860 [Multi-domain]  Cd Length: 196  Bit Score: 89.34  E-value: 3.00e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941    1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:TIGR00023   3 LLIVFLLLIGYLIGSIPFAYLVGKILKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILKGMLAVALSFLLGLFDFL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNC 160
Cdd:TIGR00023  83 PGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLIMLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLPY 162

                         170
                  ....*....|....*..
gi 493781941  161 AGILFFIGWCVMLYKFR 177
Cdd:TIGR00023 163 LYIPVTLLLIFVIYRHR 179
 
Name Accession Description Interval E-value
PRK14411 PRK14411
membrane protein; Provisional
 1-201 1.04e-55

membrane protein; Provisional


Pssm-ID: 184663  Cd Length: 204  Bit Score: 175.35  E-value: 1.04e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK14411   1 MARFWATLIGYVFGNFLTAMIVGKIFLHKDPTKYGSGNPGTANMGAVFGKKWGILTCIGDLLKTLIALFIVYFIYHGHLN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFvIYSNC 160
Cdd:PRK14411  81 IAYAGLGVVLGHCFPIWNHFKGGKGVAVTAQVAVFYDWRAGLITLLIALVLTAIMQNLTIPPLVFMLLFSIYTF-WNNQE 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 493781941 161 AGILFFIGWCVMLYKFRNDLVAYCKGKGKRTDILFLFKRVL 201
Cdd:PRK14411 160 AGLVFLIITLIMIFKFRKDIVDFFTGHGKRVDILYTIKKKL 200
PlsY COG0344
Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid ...
 1-177 2.32e-36

Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid transport and metabolism];


Pssm-ID: 440113 [Multi-domain]  Cd Length: 194  Bit Score: 125.59  E-value: 2.32e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:COG0344    2 MLLLLLLLLAYLLGSIPFGYLVGKLFGGIDIREHGSGNIGATNVLRVLGKKAGLLVLLLDALKGALAVLLARLLGGGPLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNC 160
Cdd:COG0344   82 LLLAGLAAVLGHNFPVFLGFKGGKGVATALGVLLALSPLVGLIALAVWLLVLLLTRYVSLGSLVAALAAPILALLLGGPL 161

                        170
                 ....*....|....*...
gi 493781941 161 A-GILFFIGWCVMLYKFR 177
Cdd:COG0344  162 AlLLLALLLALLVIYRHR 179
G3P_acyltransf pfam02660
Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl ...
 9-181 1.16e-33

Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate to form lysophosphatidic acid.


Pssm-ID: 460641 [Multi-domain]  Cd Length: 174  Bit Score: 117.98  E-value: 1.16e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941    9 VGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHISLAYCGLGL 88
Cdd:pfam02660   1 IAYLLGSIPFGYLIGKLLKGIDIREYGSGNPGATNVLRVLGKKAGILVLLLDALKGVLAVLLARLLFGGLLLELLAGLAA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   89 MLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNCAGILFFIG 168
Cdd:pfam02660  81 VLGHNFPVFLGFKGGKGVATTLGVLLALSPWDALIALAVFLLVLALTRYVSLGSLVAALLLPILLLLFGLPLVIFALLLA 160

                         170
                  ....*....|...
gi 493781941  169 wCVMLYKFRNDLV 181
Cdd:pfam02660 161 -LLVIWRHRENIK 172
PRK00220 PRK00220
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-124 8.01e-28

glycerol-3-phosphate 1-O-acyltransferase PlsY;


Pssm-ID: 234691 [Multi-domain]  Cd Length: 198  Bit Score: 103.71  E-value: 8.01e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK00220   3 MIALLLILLAYLLGSIPFALLVGKLFGLPDPREHGSGNPGATNVLRIGGKKAAIATLLGDALKGTLAVLLAYLFGLDPIS 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFC 124
Cdd:PRK00220  83 LGLIALAAVLGHIFPVFFKFKGGKGVATAAGVLLGIGPLLALIL 126
TIGR00023 TIGR00023
acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of ...
 1-177 3.00e-22

acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of acylphosphate:glycerol 3-phosphate acyltransferase, and integral membrane protein about 200 amino acids in length, called PlsY in Streptococcus pneumoniae, YneS in Bacillus subtilis, and YgiH in E. coli. It is found in a single copy in a large number of bacteria, including the Mycoplasmas but not Mycobacteria or spirochetes, for example. Its partner is PlsX (see TIGR00182), and the pair can replace PlsB for synthesizing 1-acylglycerol-3-phosphate. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272860 [Multi-domain]  Cd Length: 196  Bit Score: 89.34  E-value: 3.00e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941    1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:TIGR00023   3 LLIVFLLLIGYLIGSIPFAYLVGKILKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILKGMLAVALSFLLGLFDFL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNC 160
Cdd:TIGR00023  83 PGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLIMLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLPY 162

                         170
                  ....*....|....*..
gi 493781941  161 AGILFFIGWCVMLYKFR 177
Cdd:TIGR00023 163 LYIPVTLLLIFVIYRHR 179
PRK14419 PRK14419
membrane protein; Provisional
 1-165 2.86e-16

membrane protein; Provisional


Pssm-ID: 237709 [Multi-domain]  Cd Length: 199  Bit Score: 73.47  E-value: 2.86e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK14419   2 LMALLIILLAYLLGSFPSGYLAGRWLKGIDLREIGSGSTGATNVLRNVGKGPALFVFIIDVGKGVLAVLLAYALGLQPWL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIYSNC 160
Cdd:PRK14419  82 QVLAGLAALLGHIWPVWLGFKGGKAVATGLGMLLALSWPVGLASLGIFLIVLALSRIVSLSSISAAIALPLLMFLLNIPL 161


                 ....*
gi 493781941 161 AGILF 165
Cdd:PRK14419 162 PYILF 166
PRK14399 PRK14399
membrane protein; Provisional
 4-167 7.91e-13

membrane protein; Provisional


Pssm-ID: 237702  Cd Length: 258  Bit Score: 65.27  E-value: 7.91e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   4 LIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGD----IVKAILALILVLIVCPMHI 79
Cdd:PRK14399  12 ILASVFGYFLGSISWSIIIVKKVGNIDIRTVGSGNPGATNTVRILGKKWGLVVAFLDalkvLFTAIFAILLSMIPNELFS 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  80 SLAYC--GLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGIFCIIIELLLMIILKNLAVSPVISLLIYSIAMFVIY 157
Cdd:PRK14399  92 QTSYFipCIFALIGHCWPIYYKFKGGKAVSCFLGLLFVVNYLYLIIFLIVWFISVAISRKVSVASIFSAATILLIMWIPY 171

                        170
                 ....*....|
gi 493781941 158 SNcaGILFFI 167
Cdd:PRK14399 172 LY--GVSYFI 179
PRK14397 PRK14397
membrane protein; Provisional
 1-114 9.78e-13

membrane protein; Provisional


Pssm-ID: 237700  Cd Length: 222  Bit Score: 64.49  E-value: 9.78e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK14397   1 MGSLLWIATAYVMGSIPFGLVFARTFCGIDPRTGGSRNVGATNVARLCGTKWGVLTLVCDVLKGAVPVAVAMSISDSPVF 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 493781941  81 LAYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIVI 114
Cdd:PRK14397  81 HSLTALAALLGHLYSCFLGFRGGKAVATTIGVFI 114
PRK14405 PRK14405
membrane protein; Provisional
 1-113 6.99e-10

membrane protein; Provisional


Pssm-ID: 237706  Cd Length: 202  Bit Score: 56.27  E-value: 6.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   1 MYNLIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHIS 80
Cdd:PRK14405   2 ILLLLAVVLSYLLGSVSFSYLIAKKIKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVVKGIAAVWIGRLLTGDGAA 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 493781941  81 L--AYCGLGLMLGHAFPFWNKFNGGKCVAVSLPIV 113
Cdd:PRK14405  82 WfpALAGLAAIIGHNWPIYFGFRGGKGIATTIGVV 116
PRK14417 PRK14417
membrane protein; Provisional
 4-116 1.16e-09

membrane protein; Provisional


Pssm-ID: 184668  Cd Length: 232  Bit Score: 55.96  E-value: 1.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   4 LIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHISLAY 83
Cdd:PRK14417   6 LIMIPAGYLVGAIPMAYLLSRWRRGIDIRRYGSGNVGASNVIKTAGKRLGLAVFVFDVSKGALMILLAGWLGLELWQQIV 85

                         90       100       110
                 ....*....|....*....|....*....|...
gi 493781941  84 CGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFF 116
Cdd:PRK14417  86 VGLATIAGHNWPVFLRFNGGRGIATSLGVALVM 118
PRK14414 PRK14414
glycerol-3-phosphate acyltransferase;
4-122 1.21e-07

glycerol-3-phosphate acyltransferase;


Pssm-ID: 184665  Cd Length: 210  Bit Score: 49.89  E-value: 1.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941   4 LIALIVGYLFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHISLAY 83
Cdd:PRK14414   8 IIALIAAYFIGSTPAPYLAGRIFKGIDIRTVGSKNMGSMNVFYNVGFWPGILVLAVDIGKGALAMAVANWLGEGLGIQML 87

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 493781941  84 CGLGLMLGHAFPFWNKFNGGKCVAVSLPIVIFFdWQWGI 122
Cdd:PRK14414  88 CALMAIAGHNYPVWLKFKGGKGGATAIGILAYM-MPEGI 125
PRK14401 PRK14401
membrane protein; Provisional
 39-118 2.08e-05

membrane protein; Provisional


Pssm-ID: 184658  Cd Length: 187  Bit Score: 43.58  E-value: 2.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  39 PGTANVGSIFGKKWGLLTCVGDIVKAILALILVLIVCPMHISLAycGLGLMLGHAFPFWNKFNGGKCVAvslPIVIFFDW 118
Cdd:PRK14401  35 PGGSGTYRQFGPGAALLVAAADILKGVAAALLARWLAPPATWLA--GAAVVAGHCWPVFFRFRGGGGIA---PTLGFFLV 109
PRK14416 PRK14416
membrane protein; Provisional
 12-122 3.85e-03

membrane protein; Provisional


Pssm-ID: 184667  Cd Length: 200  Bit Score: 36.77  E-value: 3.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493781941  12 LFGNILCAFIVCKIKFGMNPTQIGSHNPGTANVGSIFGKKWGLLTCVGDIVKAILALIL---VLIVCPMHISLAycGLGL 88
Cdd:PRK14416   1 LLGSIPSAYLVTRRLTGRDIRQMGGGNVGGLNTFREVGTGAGIAVVFIDLVKGALAVSVsyyLLTQNAQWVILT--GFAA 78

                         90       100       110
                 ....*....|....*....|....*....|....
gi 493781941  89 MLGHAFPFWNKFNGGKCVAVSLPIVIFFDWQWGI 122
Cdd:PRK14416  79 VIGHNWSVWLDFKGGKGLGPAFGAMLFLLPVYGL 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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