|
Name |
Accession |
Description |
Interval |
E-value |
| PTS-II-ABC-beta |
TIGR01995 |
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS ... |
9-611 |
2.45e-178 |
|
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.
Pssm-ID: 273919 [Multi-domain] Cd Length: 610 Bit Score: 518.45 E-value: 2.45e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 9 YEEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIGDAVEDVYDAVCVQLGM 88
Cdd:TIGR01995 1 YQDLAKAIIENVGGKENIESVTHCATRLRFTLKDDAKADTEKLKKISGVITVVKSGGQYQVVIGNDVNDVYQALMDVLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 89 QNgagSETKAEEEKKVNPAMRVLNMIVGAVLPCLNMICAGGIIKGLQTVLQMTGMIPSGSGMDLIISAMGDAIFFFLPVF 168
Cdd:TIGR01995 81 DD---QAEDDDSKGKKSILNKLIDLISGVFTPLLPALAGAGLLKAVLTLLTMTGLISADSQTYQILNAMGDAVFYFLPIL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 169 LGMNLAKALKGDGFLGALIGAILCYPTIN-----GVNLELFG-HTINATYTSSFLPVIAVTAVAIPLARWLNKYIPKVVA 242
Cdd:TIGR01995 158 LAITAAKRFKVNPYLAAAIGAALLHPTLVamvgsGKPVTFFGiPVTLMSYSSSVIPVILAVWLMSYVEKFLKKVIPGALK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 243 NFVTPVITLAVVIPFGFTLIGPAVNMAGSLVNTGITALLDTVPLLAGIIFSALYQVMVLFGIHTALTSFSFMSLLEGNPD 322
Cdd:TIGR01995 238 NFLTPLLVMLITVPLTLLIIGPLGNYAGEGISSGILFLYEVSPWLAGALLAALWPVLVMFGLHWAMIPIVINNIATQGFD 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 323 AVMAMSCLVC-FAQTGVVLGIYCKTRDRKLKSIALPAFISGLFGITEPAIYGVTLPRIKMFVLSCAGAGITGAIIMLTGT 401
Cdd:TIGR01995 318 PLILPASLAAnFAQGGAALAVMLRTKNKKLKALAGSATISALFGITEPAIYGVNLPLKKPFYAAMIGGAVGGAIIGIGSV 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 402 KMYS-FGLGVFAVLGMVNPEAP-NFIPPLLAVVVPFVVSFMLAYVLHKDeavpasDSAQITPGSETAAHEKFIIESPVPG 479
Cdd:TIGR01995 398 KAFTaFAPGLLGLPMFINPSDGaNFISALIAIVISFVVSFVLTYFIGFK------DQEDVVTQEAAALSKDESLYAPVAG 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 480 KVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLNGKPFKAHVG 559
Cdd:TIGR01995 472 EMLPLNEVPDEVFSSGAMGKGIAILPTEGEVVAPVDGTVTAVFPTKHAIGIRSDNGIEILIHVGIDTVELNGEGFEILVK 551
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 493832659 560 NGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVANESEVGKVAIENDKIVIGG 611
Cdd:TIGR01995 552 VGDHVKAGQLLLTFDLDKIKEAGYDPTTPVVVTNTKDFLDVIPTDKETVTAG 603
|
|
| PRK09824 |
PRK09824 |
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional |
7-593 |
7.71e-153 |
|
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Pssm-ID: 236627 [Multi-domain] Cd Length: 627 Bit Score: 453.78 E-value: 7.71e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 7 LNYEEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIGDAVEDVYDAVCVQL 86
Cdd:PRK09824 1 MEYTELAREIVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKNPGVIMVVESGGQFQVVIGNHVADVFLAVNSVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 87 GMQNGAgsETKAEEEKKVNPAMRVLNMIVGAVLPCLNMICAGGIIKGLQTVLQMTGMIPSGSGMDLIISAMGDAIFFFLP 166
Cdd:PRK09824 81 GLGEKA--QQAPENDKKGNLLNRFIDVISGIFTPLIGVMAATGILKGMLALALTFGWTTEQSGTYKILFAASDALFFFFP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 167 VFLGMNLAKALKGDGFLGALIGAILCYPTI----------NGVNLELFGHTIN-ATYTSSFLPVIAVTAVAIPLARWLNK 235
Cdd:PRK09824 159 IILGYTAGKKFGGNPFTAMVIGGALVHPLMiaafeagqkaDALGLDFLGIPVTlLNYSSSVIPIIFSAWLCSILERRLNA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 236 YIPKVVANFVTPVITLAVVIPFGFTLIGPAVNMAGSLVNTGITALLDTVPLLAGIIFSALYQVMVLFGIHTALTSFSFMS 315
Cdd:PRK09824 239 WLPSAIKNFFTPLLCLMVIVPLTFLLIGPLATWLSELLAAGYQWLYQAVPAFAGAVMGAFWQVFVIFGLHWGLVPLMINN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 316 LLEGNPDAVMAMSCLVCFAQTGVVLGIYCKTRDRKLKSIALPAFISGLFGITEPAIYGVTLPRIKMFVLSCAGAGITGAI 395
Cdd:PRK09824 319 LTVLGHDTMLPLLMPAVMAQVGAALGVFLCTRDAQKKVVAGSAFLAGLFGITEPAVYGVNLPLKRPFIFGCISGALGAAI 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 396 IMLTGTKMYSFGLG-VFAVLGMVNPEAPNFI--PPLLAVVVPFVVSFMLAYVLH--KDEAVPASDSAQITPGSETAAHEK 470
Cdd:PRK09824 399 IGYAQTKVYSFGLPsIFTFMQTIPPTGIDFTvwASVIGTVIAIGCAFVGTVMFGfpTAKRQPAQVAPQEKTPEVITPPEQ 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 471 FIIESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLN 550
Cdd:PRK09824 479 GGICSPMTGEVVPLEQVADTTFASGLLGKGIAILPSVGEVRSPVAGRVASLFATLHAIGLESDDGVEVLIHVGIDTVKLD 558
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 493832659 551 GKPFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVAN 593
Cdd:PRK09824 559 GKFFTAHVNVGDKVNTGDLLIEFDIPAIREAGYDLTTPVLISN 601
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
101-554 |
8.19e-83 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 267.58 E-value: 8.19e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 101 EKKVNPAMRVLNMIVGAVLPCLNMICAGGIIKGLQTVLQMTGMIPSGSGMDL---IISAMGDAIFFFLPVFLGMNLAKAL 177
Cdd:COG1263 2 KKKKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEGSFLSGtyqILNAAGDAVFYFLPLLFAIGAAKGF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 178 KGDGFLGALIGAILCYPTI------NGVNLELFGHTINATYTSSFLPVIAVTAVAIPLARWLNKYIPKVVANFVTPVITL 251
Cdd:COG1263 82 GGNPALAAVIGYLLVHPTLlnayavAGGYISFLGIPTLIGYQGGVFPGILAGWLAAYLEKFLKKKLPDALGFFFVPILTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 252 AVVIPFGFTLIGPAVNMAGSLVNTGITALLDTVPLLAGIIFSALYQVMVLFGIHTALTSFSFMSLLEGNPDAVMAMSCLV 331
Cdd:COG1263 162 LIMVPLALLVIGPIWPPIGNGIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHGLNPIFWFLLGGTGDDGLFPILAAA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 332 CFAQTGVVLGIYCKTR-DRKLKSIALPAFISGLF-GITEPAIYGVTLPRIKMFVLSCAGAGITGAIIMLTGTKMYSFGL- 408
Cdd:COG1263 242 MFGQPGAALAVYLKAKpNKKVKGLAISAALTAFLtGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFSFGVg 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 409 GVFAVLGMVNPEAPNFIPPLLAVVVPFVVSFMLAYVLHKDEAVPASDSAQITPGSETAAhekfIIESPVPGKVVPISQVP 488
Cdd:COG1263 322 GLIDFPSILNPGATNLLLYLIGLVIAFVYYFVFTFLIGREDEEEEEKLATKADAKKEEA----EAAAAALGGGGGLLLLE 397
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 493832659 489 DETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLNGKPF 554
Cdd:COG1263 398 ADITVLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIIILVVVLEGLGE 463
|
|
| NagE |
COG2190 |
Phosphotransferase system IIA component [Carbohydrate transport and metabolism]; |
466-611 |
1.42e-61 |
|
Phosphotransferase system IIA component [Carbohydrate transport and metabolism];
Pssm-ID: 441793 [Multi-domain] Cd Length: 154 Bit Score: 201.12 E-value: 1.42e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 466 AAHEKFIIESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLE 545
Cdd:COG2190 1 KKSKTLTIYAPVSGEVVPLSEVPDPVFASKMMGDGVAIEPTGGKVVAPVDGTVTSVFPTKHAIGLTSDDGLEVLIHIGID 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 493832659 546 TVGLNGKPFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVANESEVGKVAIENDKIVIGG 611
Cdd:COG2190 81 TVKLNGEGFTVLVKEGDKVKAGDPLIEFDLDAIKAAGYSLITPVVVTNSDEYKSVELTKSGQVKAG 146
|
|
| PTS_EIIA_1 |
pfam00358 |
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; |
472-591 |
2.60e-57 |
|
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1;
Pssm-ID: 459779 [Multi-domain] Cd Length: 121 Bit Score: 188.36 E-value: 2.60e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 472 IIESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLNG 551
Cdd:pfam00358 2 EIYSPVSGEVIPLSEVPDPVFSQKMMGDGVAIEPSEGKVYAPVDGTVTTVFPTKHAIGITTDDGVEVLIHIGIDTVKLKG 81
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 493832659 552 KPFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLV 591
Cdd:pfam00358 82 EGFESLVKEGDKVKAGDLLLEFDLEAIKAAGYSTTTPVVV 121
|
|
| PRK09796 |
PRK09796 |
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional |
8-457 |
2.09e-52 |
|
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
Pssm-ID: 182081 Cd Length: 472 Bit Score: 186.93 E-value: 2.09e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 8 NYEEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIGDAVEDVYDAVcvqLG 87
Cdd:PRK09796 4 NYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEV---VS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 88 MQNGAGSETKAEEEKKVNP---AMRVLNMIVGAVLPCLNMICAGGIIKGLQTVLQMTGMIPSGSGMDLIISAMGDAIFFF 164
Cdd:PRK09796 81 LLPGDMQPAQPVGKPKLTLrriGAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 165 LPVFLGMNLAKALKGDGFLGALIGAILCYPTI--------NGVNLELFGHTINAT-YTSSFLPVIAVTAVAIPLARWLNK 235
Cdd:PRK09796 161 LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFielmakaaQGEHVEFALIPVTAVkYTYTVIPALVMTWCLSYIERWVDR 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 236 YIPKVVANFVTPVITLAVVIPFGFTLIGPavnmAGSLVNTGITALLDTV----PLLAGIIFSALYQVMVLFGIHTALTSF 311
Cdd:PRK09796 241 ITPAVTKNFLKPMLIVLIAAPLAILLIGP----IGIWIGSAISALVYTIhgylGWLSVAIMGALWPLLVMTGMHRVFTPT 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 312 SFMSLLE-GNPDAVMAMSCLVCFAQTGVVLGIYCKTRDRKLKSIALPAFISGLF-GITEPAIYGVTLPRIKMFVLSCAGA 389
Cdd:PRK09796 317 IIQTIAEtGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMaGISEPALYGVAIRLKRPLIASLISG 396
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 493832659 390 GITGAIIMLTGTKMYSFGL-GVFAVLGMVNPEAPNFIP-----PLLAVVVPFVVSFMLAYvlhkdEAVPASDSA 457
Cdd:PRK09796 397 FICGAVAGMAGLASHSMAApGLFTSVQFFDPANPMSIVwvfavMALAVVLSFILTLLLGF-----EDIPVEEAA 465
|
|
| PTS_IIA_glc |
cd00210 |
PTS_IIA, PTS system, glucose/sucrose specific IIA subunit. The bacterial phosphoenolpyruvate: ... |
473-596 |
3.00e-50 |
|
PTS_IIA, PTS system, glucose/sucrose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Pssm-ID: 238128 [Multi-domain] Cd Length: 124 Bit Score: 169.78 E-value: 3.00e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 473 IESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLNGK 552
Cdd:cd00210 1 LASPITGEIVPLDQVPDEVFASKMMGDGFAIKPSDGKVVAPVDGTIVQIFPTKHAIGIESDSGVEILIHIGIDTVKLNGE 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 493832659 553 PFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVANESE 596
Cdd:cd00210 81 GFTSHVEEGQRVKQGDKLLEFDLPAIKAAGLDDTTPVIVTNSDE 124
|
|
| PTBA |
TIGR00830 |
PTS system, glucose subfamily, IIA component; These are part of the The PTS Glucose-Glucoside ... |
473-593 |
6.04e-50 |
|
PTS system, glucose subfamily, IIA component; These are part of the The PTS Glucose-Glucoside (Glc) SuperFamily. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). The IIA, IIB and IIC domains of all of the permeases listed below are demonstrably homologous. These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. The three-dimensional structures of the IIA and IIB domains of the E. coli glucose permease have been elucidated. IIAglchas a complex b-sandwich structure while IIBglc is a split ab-sandwich with a topology unrelated to the split ab-sandwich structure of HPr. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273289 [Multi-domain] Cd Length: 121 Bit Score: 168.96 E-value: 6.04e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 473 IESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLNGK 552
Cdd:TIGR00830 1 IVSPISGEIVPLDQVPDEVFASKIVGDGFAILPTDGKVVAPVDGKIGKIFPTKHAFGIESDNGVEILIHIGIDTVKLNGE 80
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 493832659 553 PFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVAN 593
Cdd:TIGR00830 81 GFTSHVEEGDRVKKGDPLLEFDLKAIKKKGYSITTPVVVTN 121
|
|
| PRK11007 |
PRK11007 |
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional |
3-447 |
3.04e-42 |
|
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional
Pssm-ID: 182896 Cd Length: 473 Bit Score: 158.70 E-value: 3.04e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 3 KKKNLNYEEVAKnIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIGDAVEDVYDAV 82
Cdd:PRK11007 1 MMSKINQQDIDR-LIELVGGRENIATVSHCITRLRFVLNDPANADPKEIEQLPMVKGCFTNAGQFQVVIGTEVGDYYKAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 83 CVQLGMQNGAGSETKAEEEKKVNPAMRVLNMIVGAVLPCLNMICAGGIIKGLQTVLqmtGMIPSGSGMDLI-ISA----- 156
Cdd:PRK11007 80 IATTGQAEVDKEQAKKAARQNMKWHERLISHFAEIFFPLLPALISGGLILGFRNVI---GDIPMSDGQTLAqMYPfwqti 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 157 ------MGDAIFFFLPVFLGMNLAKALKGDGFLGALIGAILCYPTIngVNLELFGHTINATYTSSFLPVIAV--TAVAIP 228
Cdd:PRK11007 157 ydflwlIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQL--MNAYLLGQQLPEVWDFGLFSIEKVgyQAQVIP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 229 --LA--------RWLNKYIPKVVANFVTPVITLAVVIPFGFTLIGPAVNMAGSLVNTGITALL--DTVPLLAgIIFSALY 296
Cdd:PRK11007 235 alLAglalgfieTRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVKALMtgSFAPIGA-ALFGFLY 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 297 QVMVLFGIH--TALTSFSFMSLLEGNPdaVMAMSCLVCFAQTGVVLGIYCKTRDRKLKSIALPAFISGLFGITEPAIYGV 374
Cdd:PRK11007 314 APLVITGVHqtTLAIDLQMIQSMGGTP--VWPLIALSNIAQASAVVGIIIISRKHNEREISVPAAISAYLGVTEPAMYGI 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 375 TLP-RIKMFvlsCA--GAGITGAIIMLTGtkMYSFGLGVFAVLGMVNpeapnfIPP------LLAVVVPFVVSFMLAYVL 445
Cdd:PRK11007 392 NLKyRFPML---CAmiGSALAGLICGLNG--VMANGIGVGGLPGILS------IQPqywqvyALAMLVAIVVPIVLTSFI 460
|
..
gi 493832659 446 HK 447
Cdd:PRK11007 461 YK 462
|
|
| pts-Glc |
TIGR00852 |
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ... |
158-433 |
5.23e-39 |
|
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273299 Cd Length: 289 Bit Score: 145.15 E-value: 5.23e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 158 GDAIFFFLPVFLGMNLAKALKGDGFLGALIGAILCYPTIN-------GVNLELFGHTINAT-YTSSFLPVIAVTAVAIPL 229
Cdd:TIGR00852 1 GSAAFFFLPLLFAIGAAKGFGGNPYLGAALAGILVHPVLNnamgvgaQAVGNFFGFEIAKVgYTGVVGPIIVGAIALALH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 230 ARWLNKYIPKVVANFVTPVITLAVVIPFGFTLIGPAVNMAGS-LVNTGITALLDTVPLLAGIIFSALYQVMVLFGIHTAL 308
Cdd:TIGR00852 81 ERFLDKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGRVWPPvGISALLHWLYSAGGALGGAIFGFLYRLLVPTGLHHIF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 309 TSFSFMSLLEGNPDA---VMAMSCLVCFAQTGVVLGIYCKTRDRKLKSIALPAFISGLFGITEPAIYGVTLPRIKMFVLS 385
Cdd:TIGR00852 161 YAIFIQLIAGGTVIGggqVIPGDALANMAQGGAALAVFFTAGDAKFKSIGLPAAFSAGLGITEPAMYGVALRERRPFVAG 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 493832659 386 CAGAGITGAIIMLTGTKMYSFGLGVFAVLGMVNPEAPNFIPPLLAVVV 433
Cdd:TIGR00852 241 LIGSALLTAFLTGITEPLEFLFLFGAPGLYSIHAVLAGSIFTVAIGMG 288
|
|
| murP |
PRK09586 |
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed |
10-443 |
2.62e-32 |
|
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
Pssm-ID: 181971 [Multi-domain] Cd Length: 476 Bit Score: 130.18 E-value: 2.62e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 10 EEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIG----DAVEDVYDAVCVQ 85
Cdd:PRK09586 6 SELLNTILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILSDDQVQVVLGpgkaQRAAKAMNELLGE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 86 LGMQNGAGSETKAE-----EEKKVNPAMRVLNMIVGAVLPCLNMICAGGIIKGLQTVLQMT---GMIPSGSGMDLI--IS 155
Cdd:PRK09586 86 AAAPVQDLAEIAAQnkrqlKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIEQVmhvPADAQGTLPDALnyMK 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 156 AMGDAIFFFLPVFLGMNLAKALKGDGFLGALIGA--ILCYPT------INGVNlELFGHTINATYTssflpVIAVTAVAI 227
Cdd:PRK09586 166 VFSKGLFTFLSILIGYNAQQAFGGTGVNGAIIASlfLLGYNPaattgyYAGFH-DFFGLPIDPRGN-----IIGVLIAAI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 228 PLA---RWLNKYIPKVVANFVTPVITLAVVIPFGFTLIGPAvnmaGSLVNTGITAL---LDTVPLLAGIIfSALYQVMVL 301
Cdd:PRK09586 240 AGArieRMVRRFMPDDLDMILTSLITLLITGALAFLIIMPL----GGWLFEGMSWLfmhLNSNPFGCAVL-AGLFLIAVV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 302 FGIHTALTS--FSFMSLLEGN---PDAVMAMSclvcfAQTGVVLGIYCKT-RDRKLKSIALPAFISGLFGITEPAIYGVT 375
Cdd:PRK09586 315 FGVHQGFIPvyFALMDSQGFNslfPILAMAGA-----GQVGAALALYWRAqKHSALRTQVKGAIIPGLLGVGEPLIYGVT 389
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 493832659 376 LPRIKMFVLSCAGAGITGAIIMLTGTKMYSFGLG-VFAVLGMVN---PEAPNFIPPLLAV-----VVPFVVSFMLAY 443
Cdd:PRK09586 390 LPRMKPFVTACLGGAAGGFFIGLIAWLGLPVGLNsVFGPSGLVAlplMTSAQGILPGMAVyagglLVAYVCGFIFTT 466
|
|
| PRK09439 |
PRK09439 |
PTS system glucose-specific transporter subunit; Provisional |
473-597 |
6.31e-30 |
|
PTS system glucose-specific transporter subunit; Provisional
Pssm-ID: 181859 [Multi-domain] Cd Length: 169 Bit Score: 115.84 E-value: 6.31e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 473 IESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAMGLESSNGVSLLIHVGLETVGLNGK 552
Cdd:PRK09439 23 IIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 102
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 493832659 553 PFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVANESEV 597
Cdd:PRK09439 103 GFKRIAEEGQRVKVGDPIIEFDLPLLEEKAKSTLTPVVISNMDEI 147
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
449-611 |
2.69e-26 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 113.81 E-value: 2.69e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 449 EAVPASDSAQITPGSETAAHEKFIIESPVPGKVVPISQVPDETFSSGILGKGFAVEPSEGKVYAPFDGTCVTIFETLHAM 528
Cdd:PRK10255 477 EATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAF 556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 529 GLESSNGVSLLIHVGLETVGLNGKPFKAHVGNGDNIKKGQLLLEFDIDEIKAAGCPVITPVLVANESEVGKVAIENDKIV 608
Cdd:PRK10255 557 CLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHV 636
|
...
gi 493832659 609 IGG 611
Cdd:PRK10255 637 VAG 639
|
|
| PtsG2 |
COG1264 |
Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; |
10-82 |
6.84e-24 |
|
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
Pssm-ID: 440876 [Multi-domain] Cd Length: 76 Bit Score: 95.19 E-value: 6.84e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 493832659 10 EEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLeGVLSVVHGGGEYMTVIGDAVEDVYDAV 82
Cdd:COG1264 1 KELAKDILEALGGKENIVSVDHCATRLRVTVKDPSKVDEAALKKL-GVKGVVKNGGQVQVIIGPGVDKVADEI 72
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
10-87 |
9.18e-24 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 94.91 E-value: 9.18e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 493832659 10 EEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIGDAVEDVYDAVCVQLG 87
Cdd:cd00212 1 EQLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVADVYKEAIKLLG 78
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
117-384 |
6.57e-20 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 90.87 E-value: 6.57e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 117 AVLPCLNMICAGGIIKGL-----QTVLQMTGMIPSGSGMDLIISAMGDAIFFFLPVFLGMNLAKALKGDG---------- 181
Cdd:pfam02378 3 GFMPPIPLLIAGGILLGLgnlpnDTTGLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGDgvagaaglig 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 182 ----FLGALIGAILCYPTINGVNLELFGHTINATYTSSFLPVIAVTAVAIPLARWLNKYIPKVVANFVTPVITLAVVIPF 257
Cdd:pfam02378 83 llsfNLAAAISVALTAAGLSGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKNITIKLPDSLPFFVGKRFVPIITGFV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 258 GFTLIGPAVNMAGSLVNTGITALLDTV----PLLAGIIFSALYQVMVLFGIHTALTS-FSFMSLLEGNPDA--------- 323
Cdd:pfam02378 163 TLLVIGPVLGLIWPAIQGGLNALGLLLiiagGILGGLIFGFLERLLWPFGLHGAFIAiFWFLPIGGSNPIAnqqaygaga 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 493832659 324 --VMAMSCLVCFAQTGVVLGIYC----KTRDRKLKSIALPAFISGLFGITEPAIYGVTLPRIKMFVL 384
Cdd:pfam02378 243 ahILTGGFDVMFGGPGATLALYAaaflFKKSKVKKLLGSAALTPFLFGITEPLEFGFPFVLNPPFFI 309
|
|
| PTS_EIIB |
pfam00367 |
phosphotransferase system, EIIB; |
14-45 |
4.53e-13 |
|
phosphotransferase system, EIIB;
Pssm-ID: 459785 [Multi-domain] Cd Length: 32 Bit Score: 63.16 E-value: 4.53e-13
10 20 30
....*....|....*....|....*....|..
gi 493832659 14 KNIIANIGGKENINSVRHCITRVRFRLKDESK 45
Cdd:pfam00367 1 KEILEALGGKENIKSVDHCATRLRLTVKDESK 32
|
|
| EIIB_glc |
TIGR00826 |
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ... |
13-54 |
2.04e-07 |
|
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273288 [Multi-domain] Cd Length: 88 Bit Score: 48.89 E-value: 2.04e-07
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 493832659 13 AKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNL 54
Cdd:TIGR00826 30 AAGQIQALGGTGNVNKVDACITRLRVGVADVSKVDDAVLKKL 71
|
|
| PRK14905 |
PRK14905 |
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ... |
9-80 |
3.86e-07 |
|
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Pssm-ID: 184898 [Multi-domain] Cd Length: 355 Bit Score: 52.34 E-value: 3.86e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 493832659 9 YEEVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGGEYMTVIGDA-VEDVYD 80
Cdd:PRK14905 274 FSEIAIQLIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIDCVKGLFSIANQYQIILGAGiVEKIHE 346
|
|
| PRK11404 |
PRK11404 |
PTS fructose-like transporter subunit IIBC; |
92-450 |
9.37e-06 |
|
PTS fructose-like transporter subunit IIBC;
Pssm-ID: 183120 [Multi-domain] Cd Length: 482 Bit Score: 48.33 E-value: 9.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 92 AGSETK-AEEEKKVNPAMRVLNMIVGAVLPclnMICAGGIIKGLQTVLQMTGM--IPSGSGM---DLIISAMGDAIFFFL 165
Cdd:PRK11404 111 ADSGVKlGKQEVQSGSVMSHLMAGVSAALP---FVIGGGILVALANMLVQFGLpyTDMSKGApsfTWVVESIGYLGFTFM 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 166 PVFLGMNLAKALkgdGFLGALIGAILCYPTINGVNLelfghtINATYTSSFLPVIAVTAVAIPLARW-----LNKYIPKV 240
Cdd:PRK11404 188 IPIMGAYIASSI---ADKPAFAPAFLVCYLANDKAL------LGTQSGAGFLGAVVLGLAIGYFVFWfrkvrLGKALQPL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 241 VANFVTPVITLAVVIPFGFTLIGPAVnmagSLVNTGITALLDTVPLLAGIIFSALYQVMVLFG----IHTALTSFSFmSL 316
Cdd:PRK11404 259 LGSMLIPFVTLLVFGVLTYYVIGPVM----SDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDmggpINKTAWFFCF-SL 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 317 LEG---NPDAVMAMSCLVCFAQTGVVLGIYCKTRDRKLKSIALPAFISGLFGITEPAI-YGVTLPrIKMFVLSCAGAGIT 392
Cdd:PRK11404 334 LEKhiyDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIpYALAAP-LPMITANTLAGGIT 412
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 493832659 393 GAIIMLTGTKMYSFGLGVF-AVLGMVNPEAPNFIPPLLAVV--VPFVVSFMLAYVLHKDEA 450
Cdd:PRK11404 413 GVLVIAFGIKRLAPGLGIFdPLIGLMSPVGSFYLVLAIGLAlnISFIIVLKGLWLRRKAKA 473
|
|
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
11-65 |
1.06e-05 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 48.17 E-value: 1.06e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 493832659 11 EVAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLEGVLSVVHGGG 65
Cdd:PRK11089 400 EMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSG 454
|
|
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
13-82 |
1.55e-05 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 47.80 E-value: 1.55e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 493832659 13 AKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLeGVLSVVHGGGEYM-TVIGDAVEDVYDAV 82
Cdd:PRK10110 452 VPAILEALGGADNIVSLDNCITRLRLSVKDMSLVDVQALKDN-RAIGVVQLNQHNLqVVIGPQVQSVKDEM 521
|
|
| FrwC |
COG1299 |
Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and ... |
229-457 |
2.15e-04 |
|
Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism];
Pssm-ID: 440910 [Multi-domain] Cd Length: 469 Bit Score: 44.11 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 229 LARWLNKYI--PKVVAN----FVTPVITLAVVIPFGFTLIGPAVnmagSLVNTGITALL----DTVPLLAGIIFSAlyqv 298
Cdd:COG1299 238 VVLWLKKKIklPKSLEGlkpiLIIPLLGTLITGLLMIYVIGPPI----AALNTALTNWLnsmsGSNAVLLGAILGA---- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 299 MVLF---G-IHTALTSFSFMSLLEGNPDAVMAMSCLVCFAQTGVVLG--IYCKTRDRKLKSIALPAFISGLFGITEPAI- 371
Cdd:COG1299 310 MMAFdmgGpVNKAAYAFGTGLLASGIYAPMAAVMAAGMVPPLGLALAtlLFKKKFTEEEREAGKAAFILGLSFITEGAIp 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 372 YGVTLPrIKMFVLSCAGAGITGAIIMLTGTKMYSFGLGVFaVLGMVNpeapNFIPPLLAVVVPFVVSFMLAYVLHKDEAV 451
Cdd:COG1299 390 FAAADP-LRVIPSNMIGSAVAGALSMLFGVTLPAPHGGIF-VLPLVS----NPLLYLLAIAIGTVVTALLLGLLKKPVEK 463
|
....*.
gi 493832659 452 PASDSA 457
Cdd:COG1299 464 KEEAAE 469
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
4-104 |
9.39e-04 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 42.17 E-value: 9.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 4 KKNLNYEE----VAKNIIANIGGKENINSVRHCITRVRFRLKDESKADDEIVKNLeGVLSVVHGGGEYMTVIgdavedvy 79
Cdd:PRK10255 380 EANSNTEEgltqLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDAMCKRL-GASGVVKLNKQTIQVI-------- 450
|
90 100
....*....|....*....|....*
gi 493832659 80 davcvqlgmqNGAGSETKAEEEKKV 104
Cdd:PRK10255 451 ----------VGAKAESIGDAMKKV 465
|
|
| PTS_EIIC_2 |
pfam13303 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
153-447 |
6.33e-03 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 433101 Cd Length: 327 Bit Score: 39.10 E-value: 6.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 153 IISAMGDAIFFFLPVFLGMNLAKALKGDGFLGALIGAIlcyPTINGVNLELFGHTINATYTSSFLPVIAVTAVAIPLARW 232
Cdd:pfam13303 33 LLITIGTIAQSLLGPAIGALVALQLGANPLVSASVGAA---GFIGSGAVKFTEGGWFLIGTGDPINAFLAAAIAVLVGKL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 233 LNkYIPKVVANFVTPVITLAVVIPFGfTLIGPAVNMAGSLVNTGITALLDTVPLLAGIIFSALYQVMVLFGIHTAltSFS 312
Cdd:pfam13303 110 IG-NKKTKLDIIVLPIVVIVVGGLIG-LLILPYVKPITEAIGNVINTATDLQPLIMGILIAVIFGILITSPISSA--AIA 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493832659 313 FMSLLEGNPDAVMAMSCLVCFAQTGVvlgiycktrdRKLKSIALPAFISGLFG---------ITEPAIYGVTLprikmfv 383
Cdd:pfam13303 186 IALGLTGLASGAAAIGCAAQMVGLAV----------ASLKVNGFGGTLAVGLGtpklqmpniLKNPIILIPPL------- 248
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 493832659 384 LSCAGAGITGAIIMLTGTKMySFGLGVFAVLGMVNP---EAPNFIPP--LLAVVVPFVVSFMLAYVLHK 447
Cdd:pfam13303 249 LAGAISGPVAAIFGLQGTPA-SAGFGTSGLVGPLAAltgTGWSTVLIiiLVYFVLPAVLGLLISKLFKK 316
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