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Conserved domains on  [gi|494859595|ref|WP_007585695|]
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MULTISPECIES: PA2169 family four-helix-bundle protein [Pseudoalteromonas]

Protein Classification

ferritin-like domain-containing protein( domain architecture ID 10560096)

ferritin-like domain-containing protein belongs to a broad superfamily of ferritin-like diiron-carboxylate proteins that catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; similar to Pseudomonas aeruginosa PA2169

CATH:  1.20.1260.10
Gene Ontology:  GO:0046872
PubMed:  8749363|9444766|3304136
SCOP:  4004279

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2383 pfam09537
Domain of unknown function (DUF2383); Members of this protein family are found mostly in the ...
 11-116 1.74e-29

Domain of unknown function (DUF2383); Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.


:

Pssm-ID: 430673  Cd Length: 106  Bit Score: 103.45  E-value: 1.74e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494859595   11 HITDIIQVMNSGIDFYQKAQEKVEDPAIGALFQRMIDARKVSVERLQPYAINEKGEREDGSSFAVEARRAYTALLTTFTS 90
Cdd:pfam09537   1 ALNDLIETLYDGEDGYKTAAENVKDPQLKTLLQRRAAERRAAARELQSEIRALGGEPEDGGSFAGTLHRAWVDLKSALTS 80

                          90       100
                  ....*....|....*....|....*.
gi 494859595   91 HNDSTYVKELEEVEDKTLVEIKAAMD 116
Cdd:pfam09537  81 NDEEAILEELERGEDAALEAYEEALE 106
 
Name Accession Description Interval E-value
DUF2383 pfam09537
Domain of unknown function (DUF2383); Members of this protein family are found mostly in the ...
 11-116 1.74e-29

Domain of unknown function (DUF2383); Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.


Pssm-ID: 430673  Cd Length: 106  Bit Score: 103.45  E-value: 1.74e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494859595   11 HITDIIQVMNSGIDFYQKAQEKVEDPAIGALFQRMIDARKVSVERLQPYAINEKGEREDGSSFAVEARRAYTALLTTFTS 90
Cdd:pfam09537   1 ALNDLIETLYDGEDGYKTAAENVKDPQLKTLLQRRAAERRAAARELQSEIRALGGEPEDGGSFAGTLHRAWVDLKSALTS 80

                          90       100
                  ....*....|....*....|....*.
gi 494859595   91 HNDSTYVKELEEVEDKTLVEIKAAMD 116
Cdd:pfam09537  81 NDEEAILEELERGEDAALEAYEEALE 106
TIGR02284 TIGR02284
conserved hypothetical protein; Members of this protein family are found mostly in the ...
 14-145 1.47e-14

conserved hypothetical protein; Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.


Pssm-ID: 131337  Cd Length: 139  Bit Score: 66.01  E-value: 1.47e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494859595   14 DIIQVMNSGIDFYQKAQEKVEDPAIGALFQRMIDARKVSVERLQPYAINEKGEREDGSSFAVEARRAYTALLTTFTSHND 93
Cdd:TIGR02284   7 DLIEISIDGKDGFEESAEEVKDPELATLFRRIAGEKSAIVSELQQVVASLGGKPEDHGSMVGSLHQFWGKIRATLTPNDD 86

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 494859595   94 STYVKELEEVEDKTLVEIKAAM-DKPQPADCEAALAKTLLTMQSCHAEMSRMQ 145
Cdd:TIGR02284  87 YVVLEEAERGEDRAKKAYDETLaDQDTPAAARDVALRQYPGVRACHDVIRALR 139
 
Name Accession Description Interval E-value
DUF2383 pfam09537
Domain of unknown function (DUF2383); Members of this protein family are found mostly in the ...
 11-116 1.74e-29

Domain of unknown function (DUF2383); Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.


Pssm-ID: 430673  Cd Length: 106  Bit Score: 103.45  E-value: 1.74e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494859595   11 HITDIIQVMNSGIDFYQKAQEKVEDPAIGALFQRMIDARKVSVERLQPYAINEKGEREDGSSFAVEARRAYTALLTTFTS 90
Cdd:pfam09537   1 ALNDLIETLYDGEDGYKTAAENVKDPQLKTLLQRRAAERRAAARELQSEIRALGGEPEDGGSFAGTLHRAWVDLKSALTS 80

                          90       100
                  ....*....|....*....|....*.
gi 494859595   91 HNDSTYVKELEEVEDKTLVEIKAAMD 116
Cdd:pfam09537  81 NDEEAILEELERGEDAALEAYEEALE 106
TIGR02284 TIGR02284
conserved hypothetical protein; Members of this protein family are found mostly in the ...
 14-145 1.47e-14

conserved hypothetical protein; Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.


Pssm-ID: 131337  Cd Length: 139  Bit Score: 66.01  E-value: 1.47e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494859595   14 DIIQVMNSGIDFYQKAQEKVEDPAIGALFQRMIDARKVSVERLQPYAINEKGEREDGSSFAVEARRAYTALLTTFTSHND 93
Cdd:TIGR02284   7 DLIEISIDGKDGFEESAEEVKDPELATLFRRIAGEKSAIVSELQQVVASLGGKPEDHGSMVGSLHQFWGKIRATLTPNDD 86

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 494859595   94 STYVKELEEVEDKTLVEIKAAM-DKPQPADCEAALAKTLLTMQSCHAEMSRMQ 145
Cdd:TIGR02284  87 YVVLEEAERGEDRAKKAYDETLaDQDTPAAARDVALRQYPGVRACHDVIRALR 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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