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Conserved domains on  [gi|494989726|ref|WP_007715746|]
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MULTISPECIES: DUF2502 domain-containing protein [Cronobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2502 super family cl11294
Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The ...
 24-105 2.62e-11

Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The function is not known.


The actual alignment was detected with superfamily member pfam10697:

Pssm-ID: 431443  Cd Length: 90  Bit Score: 55.38  E-value: 2.62e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494989726   24 EITLLPSIKLQIGDRDNYGNYWDGGRWRDRDYWRNHYEWRGDRWWRHDNGRHRGWDKHRGWDDRRAYERGYREGWNDRDD 103
Cdd:pfam10697   1 SIDLLPSISLQIGDQDDRGNYWDGYDWRDRQWWHNHRGAHIGERNERGYYWDGNRWQRHDNGYRKAYERGGREPWRDRDK 80


                  ..
gi 494989726  104 RR 105
Cdd:pfam10697  81 HG 82
 
Name Accession Description Interval E-value
DUF2502 pfam10697
Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The ...
 24-105 2.62e-11

Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The function is not known.


Pssm-ID: 431443  Cd Length: 90  Bit Score: 55.38  E-value: 2.62e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494989726   24 EITLLPSIKLQIGDRDNYGNYWDGGRWRDRDYWRNHYEWRGDRWWRHDNGRHRGWDKHRGWDDRRAYERGYREGWNDRDD 103
Cdd:pfam10697   1 SIDLLPSISLQIGDQDDRGNYWDGYDWRDRQWWHNHRGAHIGERNERGYYWDGNRWQRHDNGYRKAYERGGREPWRDRDK 80


                  ..
gi 494989726  104 RR 105
Cdd:pfam10697  81 HG 82
PHA03118 PHA03118
multifunctional expression regulator; Provisional
 25-105 3.56e-03

multifunctional expression regulator; Provisional


Pssm-ID: 165391  Cd Length: 474  Bit Score: 35.82  E-value: 3.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494989726  25 ITLLPSIKLQIGDRDN--YGNYWDGGRWRDRDYWRNHYEWRGDRWWRHDNGRHRGW-DKHRGWDDRRAYERGYREGWNDR 101
Cdd:PHA03118 106 VTFLDDINHHGGRDTEpgHAHIENGERKSPKSYNQQSRKKHRDESLRNKHGRPSGPpAMSPGEHFDQTHDAEYRLRFNER 185


                 ....
gi 494989726 102 DDRR 105
Cdd:PHA03118 186 DARR 189
 
Name Accession Description Interval E-value
DUF2502 pfam10697
Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The ...
 24-105 2.62e-11

Protein of unknown function (DUF2502); Members of this family are all Gammaproteobacteria. The function is not known.


Pssm-ID: 431443  Cd Length: 90  Bit Score: 55.38  E-value: 2.62e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494989726   24 EITLLPSIKLQIGDRDNYGNYWDGGRWRDRDYWRNHYEWRGDRWWRHDNGRHRGWDKHRGWDDRRAYERGYREGWNDRDD 103
Cdd:pfam10697   1 SIDLLPSISLQIGDQDDRGNYWDGYDWRDRQWWHNHRGAHIGERNERGYYWDGNRWQRHDNGYRKAYERGGREPWRDRDK 80


                  ..
gi 494989726  104 RR 105
Cdd:pfam10697  81 HG 82
PHA03118 PHA03118
multifunctional expression regulator; Provisional
 25-105 3.56e-03

multifunctional expression regulator; Provisional


Pssm-ID: 165391  Cd Length: 474  Bit Score: 35.82  E-value: 3.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494989726  25 ITLLPSIKLQIGDRDN--YGNYWDGGRWRDRDYWRNHYEWRGDRWWRHDNGRHRGW-DKHRGWDDRRAYERGYREGWNDR 101
Cdd:PHA03118 106 VTFLDDINHHGGRDTEpgHAHIENGERKSPKSYNQQSRKKHRDESLRNKHGRPSGPpAMSPGEHFDQTHDAEYRLRFNER 185


                 ....
gi 494989726 102 DDRR 105
Cdd:PHA03118 186 DARR 189
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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