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Conserved domains on  [gi|495058041|ref|WP_007782875|]
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MULTISPECIES: flagellar basal body P-ring formation chaperone FlgA [Cronobacter]

Protein Classification

flagella basal body P-ring formation protein FlgA( domain architecture ID 11482531)

flagella basal body P-ring formation protein FlgA is a periplasmic protein essential for flagellar P-ring assembly

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgA PRK07018
flagellar basal body P-ring formation protein FlgA;
1-219 1.33e-85

flagellar basal body P-ring formation protein FlgA;


:

Pssm-ID: 180794 [Multi-domain]  Cd Length: 235  Bit Score: 253.31  E-value: 1.33e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   1 MKSLKFCLAAGLLLLSPGIFA--------DALNAQLTPFFLQRL-AGISDAVVVTVKTPEPQRL--TCDNPDFSLPGNAR 69
Cdd:PRK07018   2 MLTLKRLLAIIALLFSALSAAaaatqqspEAISEQAEQFLEQQLeAGLPGKVSVTVATLDPRLRlpACDQLEASLPSNAR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  70 LWGNLSVQVRCGEQ---KRYMQVNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLA 146
Cdd:PRK07018  82 LWGNVTVGVRCGGPypwTVYVPVRVQVTGPYVVAARPLARGEKLSASDVTLREGDLDTLPPGVFTDPDQLVGAVSKRRIA 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495058041 147 ANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSGIVGSDGIILINL 219
Cdd:PRK07018 162 PGQPIRLNMLRQAWVVCKGQTVSIIARGDGFSVKTEGEALNDGAVGQQIRVRnMASGQVVSGIVTGDGEVEVNL 235
 
Name Accession Description Interval E-value
flgA PRK07018
flagellar basal body P-ring formation protein FlgA;
1-219 1.33e-85

flagellar basal body P-ring formation protein FlgA;


Pssm-ID: 180794 [Multi-domain]  Cd Length: 235  Bit Score: 253.31  E-value: 1.33e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   1 MKSLKFCLAAGLLLLSPGIFA--------DALNAQLTPFFLQRL-AGISDAVVVTVKTPEPQRL--TCDNPDFSLPGNAR 69
Cdd:PRK07018   2 MLTLKRLLAIIALLFSALSAAaaatqqspEAISEQAEQFLEQQLeAGLPGKVSVTVATLDPRLRlpACDQLEASLPSNAR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  70 LWGNLSVQVRCGEQ---KRYMQVNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLA 146
Cdd:PRK07018  82 LWGNVTVGVRCGGPypwTVYVPVRVQVTGPYVVAARPLARGEKLSASDVTLREGDLDTLPPGVFTDPDQLVGAVSKRRIA 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495058041 147 ANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSGIVGSDGIILINL 219
Cdd:PRK07018 162 PGQPIRLNMLRQAWVVCKGQTVSIIARGDGFSVKTEGEALNDGAVGQQIRVRnMASGQVVSGIVTGDGEVEVNL 235
FlgA COG1261
Flagellar basal body P-ring formation protein FlgA [Cell motility];
68-219 4.45e-48

Flagellar basal body P-ring formation protein FlgA [Cell motility];


Pssm-ID: 440873 [Multi-domain]  Cd Length: 158  Bit Score: 155.05  E-value: 4.45e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  68 ARLWGNLSVQVRCGEQ--KRYMQVNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDL 145
Cdd:COG1261    4 ARLWGRLSVGVRCDGKgwTVYVPARVAVYGEVVVAARPLARGEVITADDLRLEEGDLARLPGGALTDPDELVGKVARRSL 83

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 495058041 146 AANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVRMA-SGQVVSGIVGSDGIILINL 219
Cdd:COG1261   84 RAGQPLRASDLRAPPLVKRGQTVTIVARGGGFSVSAEGRALENGALGDRIRVRNLsSGKVVSGRVVGDGTVEVGL 158
flgA_cterm TIGR03170
flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal ...
 97-217 2.48e-33

flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal region of the flagellar basal body P-ring formation protein FlgA. This sequence region contains a SAF domain, now described by pfam08666. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274466 [Multi-domain]  Cd Length: 122  Bit Score: 116.09  E-value: 2.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   97 YVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANGEG 176
Cdd:TIGR03170   1 VVVAKRPLKRGEVITPEDLKLERGDLARLPGGVLTDPDEVVGKVAKRPLRAGQPLTANMLRPPWLVKRGDTVTVIARGGG 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 495058041  177 FSINGEGRALNNAAVAQNARVR-MASGQVVSGIVGSDGIILI 217
Cdd:TIGR03170  81 LSITTEGKALEDGAVGDQIRVRnLSSGKIISGIVTAPGTVEV 122
ChapFlgA pfam13144
Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF ...
 95-217 5.97e-25

Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF family, and includes chaperones for flagellar basal-body proteins and pilus-assembly proteins, FlgA, RcpB and CpaB. ChapFlgA is necessary for the formation of the P-ring of the flagellum, FlgI, which sits in the peptidoglycan layer of the outer membrane of the bacterium. FlgA plays an auxiliary role in P-ring assembly.


Pssm-ID: 432991 [Multi-domain]  Cd Length: 122  Bit Score: 94.53  E-value: 5.97e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   95 GNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLnlDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANG 174
Cdd:pfam13144   1 VPVVVAARPLARGEVITASDLALKKRDLARLPGGYLT--DQAIGKRVKRSIRAGQPIRQNMLEAPPLVKKGQKVTIIARG 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 495058041  175 EGFSINGEGRALNNAAVAQNARVRM-ASGQVVSGIVGSDGIILI 217
Cdd:pfam13144  79 GGFRITTEGKALENGAEGDQIRVKNlQSGRIVTGRVTGPGTVEV 122
SAF_CpaB_FlgA_like cd11614
SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus ...
 96-156 9.07e-12

SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB; FlgA is a putative periplasmic chaperone that assists in the formation of the flagellar P ring; CpaB is a protein invoved in the assembly of the flp pili, which are bacterial virulence factors mediating non-specific adherence to surfaces; these proteins appear to contain a single SAF domain. This intermediate family also contains the SAF domains of sialic acid synthetases and type III antifreeze proteins, which also share the same extensive core structure.


Pssm-ID: 212159 [Multi-domain]  Cd Length: 61  Bit Score: 58.25  E-value: 9.07e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 495058041  96 NYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMV 156
Cdd:cd11614    1 PVVVAARDLPAGTVITADDLTLVEVPLSLLPPGALTDPDDVVGRVARRPLRAGEPITASML 61
SAF smart00858
This domain family includes a range of different proteins. Such as antifreeze proteins and ...
 96-157 3.87e-09

This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins;


Pssm-ID: 214862 [Multi-domain]  Cd Length: 63  Bit Score: 51.41  E-value: 3.87e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 495058041    96 NYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMVR 157
Cdd:smart00858   2 NVVVAARDLPAGEVITAEDLRLGHVALRDLPGGGLTPYGQVIGRVARRDIAAGEPITASNLE 63
 
Name Accession Description Interval E-value
flgA PRK07018
flagellar basal body P-ring formation protein FlgA;
1-219 1.33e-85

flagellar basal body P-ring formation protein FlgA;


Pssm-ID: 180794 [Multi-domain]  Cd Length: 235  Bit Score: 253.31  E-value: 1.33e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   1 MKSLKFCLAAGLLLLSPGIFA--------DALNAQLTPFFLQRL-AGISDAVVVTVKTPEPQRL--TCDNPDFSLPGNAR 69
Cdd:PRK07018   2 MLTLKRLLAIIALLFSALSAAaaatqqspEAISEQAEQFLEQQLeAGLPGKVSVTVATLDPRLRlpACDQLEASLPSNAR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  70 LWGNLSVQVRCGEQ---KRYMQVNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLA 146
Cdd:PRK07018  82 LWGNVTVGVRCGGPypwTVYVPVRVQVTGPYVVAARPLARGEKLSASDVTLREGDLDTLPPGVFTDPDQLVGAVSKRRIA 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495058041 147 ANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSGIVGSDGIILINL 219
Cdd:PRK07018 162 PGQPIRLNMLRQAWVVCKGQTVSIIARGDGFSVKTEGEALNDGAVGQQIRVRnMASGQVVSGIVTGDGEVEVNL 235
FlgA COG1261
Flagellar basal body P-ring formation protein FlgA [Cell motility];
68-219 4.45e-48

Flagellar basal body P-ring formation protein FlgA [Cell motility];


Pssm-ID: 440873 [Multi-domain]  Cd Length: 158  Bit Score: 155.05  E-value: 4.45e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  68 ARLWGNLSVQVRCGEQ--KRYMQVNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDL 145
Cdd:COG1261    4 ARLWGRLSVGVRCDGKgwTVYVPARVAVYGEVVVAARPLARGEVITADDLRLEEGDLARLPGGALTDPDELVGKVARRSL 83

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 495058041 146 AANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVRMA-SGQVVSGIVGSDGIILINL 219
Cdd:COG1261   84 RAGQPLRASDLRAPPLVKRGQTVTIVARGGGFSVSAEGRALENGALGDRIRVRNLsSGKVVSGRVVGDGTVEVGL 158
flgA_cterm TIGR03170
flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal ...
 97-217 2.48e-33

flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal region of the flagellar basal body P-ring formation protein FlgA. This sequence region contains a SAF domain, now described by pfam08666. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274466 [Multi-domain]  Cd Length: 122  Bit Score: 116.09  E-value: 2.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   97 YVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANGEG 176
Cdd:TIGR03170   1 VVVAKRPLKRGEVITPEDLKLERGDLARLPGGVLTDPDEVVGKVAKRPLRAGQPLTANMLRPPWLVKRGDTVTVIARGGG 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 495058041  177 FSINGEGRALNNAAVAQNARVR-MASGQVVSGIVGSDGIILI 217
Cdd:TIGR03170  81 LSITTEGKALEDGAVGDQIRVRnLSSGKIISGIVTAPGTVEV 122
ChapFlgA pfam13144
Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF ...
 95-217 5.97e-25

Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF family, and includes chaperones for flagellar basal-body proteins and pilus-assembly proteins, FlgA, RcpB and CpaB. ChapFlgA is necessary for the formation of the P-ring of the flagellum, FlgI, which sits in the peptidoglycan layer of the outer membrane of the bacterium. FlgA plays an auxiliary role in P-ring assembly.


Pssm-ID: 432991 [Multi-domain]  Cd Length: 122  Bit Score: 94.53  E-value: 5.97e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   95 GNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLnlDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANG 174
Cdd:pfam13144   1 VPVVVAARPLARGEVITASDLALKKRDLARLPGGYLT--DQAIGKRVKRSIRAGQPIRQNMLEAPPLVKKGQKVTIIARG 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 495058041  175 EGFSINGEGRALNNAAVAQNARVRM-ASGQVVSGIVGSDGIILI 217
Cdd:pfam13144  79 GGFRITTEGKALENGAEGDQIRVKNlQSGRIVTGRVTGPGTVEV 122
SAF_CpaB_FlgA_like cd11614
SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus ...
 96-156 9.07e-12

SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB; FlgA is a putative periplasmic chaperone that assists in the formation of the flagellar P ring; CpaB is a protein invoved in the assembly of the flp pili, which are bacterial virulence factors mediating non-specific adherence to surfaces; these proteins appear to contain a single SAF domain. This intermediate family also contains the SAF domains of sialic acid synthetases and type III antifreeze proteins, which also share the same extensive core structure.


Pssm-ID: 212159 [Multi-domain]  Cd Length: 61  Bit Score: 58.25  E-value: 9.07e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 495058041  96 NYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMV 156
Cdd:cd11614    1 PVVVAARDLPAGTVITADDLTLVEVPLSLLPPGALTDPDDVVGRVARRPLRAGEPITASML 61
flgA PRK06804
flagellar basal body P-ring formation protein FlgA;
57-215 2.46e-10

flagellar basal body P-ring formation protein FlgA;


Pssm-ID: 235863 [Multi-domain]  Cd Length: 261  Bit Score: 58.35  E-value: 2.46e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  57 CDNP-DFSLPGNARL-WGNLSVQVRC-GEQKRYMQVNVQA--FGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAML 131
Cdd:PRK06804  93 CQKAlQVALPTAETQhLSRLRYEVSCpDGQGWEVVVTVKPdiYLPVWVAKQTLERGRKVQADDIELKKKNISGVQGGYIT 172

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041 132 NLDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSGIVG 210
Cdd:PRK06804 173 DPDEAIGLTIKRRIRQLQAVIPSQLEQPVLVERGQHVLMIAAQDGIEAQTLGIAQKNGRKGELIKVKnLSSGRVVTATVD 252


                 ....*
gi 495058041 211 SDGII 215
Cdd:PRK06804 253 GSGRV 257
flgA PRK12786
flagellar basal body P-ring formation protein FlgA;
98-218 4.28e-10

flagellar basal body P-ring formation protein FlgA;


Pssm-ID: 237201 [Multi-domain]  Cd Length: 338  Bit Score: 58.13  E-value: 4.28e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  98 VVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANGEGF 177
Cdd:PRK12786 195 PVLARAVGRGEVIKSSDVVWERRPKARVSGDDIASREDLVGMQARRALRAGQPLRGADLAKPDLVQRGQLVTLIYQTPGI 274

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 495058041 178 SINGEGRALNNAAVAQNARV-RMASGQVVSGIVGSDGIILIN 218
Cdd:PRK12786 275 YLTARGKALEDGAEGDVVRVlNLQSKRTVTGTVTGRGQVSVD 316
SAF smart00858
This domain family includes a range of different proteins. Such as antifreeze proteins and ...
 96-157 3.87e-09

This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins;


Pssm-ID: 214862 [Multi-domain]  Cd Length: 63  Bit Score: 51.41  E-value: 3.87e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 495058041    96 NYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMVR 157
Cdd:smart00858   2 NVVVAARDLPAGEVITAEDLRLGHVALRDLPGGGLTPYGQVIGRVARRDIAAGEPITASNLE 63
SAF pfam08666
SAF domain; This domain family includes a range of different proteins. Such as antifreeze ...
 96-157 3.06e-07

SAF domain; This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


Pssm-ID: 430140 [Multi-domain]  Cd Length: 63  Bit Score: 46.01  E-value: 3.06e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 495058041   96 NYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAANQPVMLSMVR 157
Cdd:pfam08666   2 NVVVAARDLPAGEVITADDLTLVRPPLALPPGLFPIAYGEVIGKVARRDIAAGEPLTASDLE 63
flgA PRK06005
flagellar basal body P-ring formation protein FlgA;
133-215 6.13e-06

flagellar basal body P-ring formation protein FlgA;


Pssm-ID: 180347 [Multi-domain]  Cd Length: 160  Bit Score: 44.67  E-value: 6.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041 133 LDQAREAVTLRDLAANQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVSGIVGS 211
Cdd:PRK06005  72 IDQVVGKVAKRTLLPGRPIPVSALREPSLVTRGSPVKLVFSAGGLTITAAGTPLQSGAAGDLIRVRnVDSGVIVSGTVLA 151


                 ....
gi 495058041 212 DGII 215
Cdd:PRK06005 152 DGTI 155
ChapFlgA_N pfam17656
FlgA N-terminal domain; Presumed domain found to N-terminus of SAF-like domain in FlgA ...
 31-93 6.11e-05

FlgA N-terminal domain; Presumed domain found to N-terminus of SAF-like domain in FlgA proteins.


Pssm-ID: 435950  Cd Length: 76  Bit Score: 40.03  E-value: 6.11e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041   31 FFLQRLAGISDAVVVTVKTPEPqRLT---CDNP-DFSLPGNARLWGNLSVQVRCGE---QKRYMQVNVQA 93
Cdd:pfam17656   8 FLQQQGAGLGGKVEIKVGNLDP-RLRlpaCDGAlEVELPSGSDPWGRFTVKVRCNGpapWTLYVPVRVEV 76
flgA PRK12618
flagellar basal body P-ring formation protein FlgA;
93-218 4.26e-03

flagellar basal body P-ring formation protein FlgA;


Pssm-ID: 183626 [Multi-domain]  Cd Length: 141  Bit Score: 36.21  E-value: 4.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495058041  93 AFGNYVVASQPVARGGMLDESNVRLERGRLdllpPNAMLNLDQA--REAVTLrdLAANQPVMLSMVRQSWRVKAGQQVQI 170
Cdd:PRK12618  17 AAAETVVAARTIRALTVIGAEDLALKPGDT----PGALTDPAQAigQEARVT--LYAGRPIRAADLGPPAIVDRNQLVPL 90

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 495058041 171 LANGEGFSINGEGRALNNAAVAQNARV-RMASGQVVSGIVGSDGIILIN 218
Cdd:PRK12618  91 AYRLGGLEIRTEGRALSRGGVGDEIRVmNLSSRTTVSGRIAADGSVIVG 139
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
 131-181 8.81e-03

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 34.40  E-value: 8.81e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 495058041  131 LNLDQAREAVTLRDL----AANQPVMLSMVRQSWRVKAGQQVQILANGEGFSING 181
Cdd:pfam08541  31 LGLPPEKVVVNLDEYgntsAASIPLALDEAVEEGKLKPGDLVLLVGFGAGLTWGA 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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