|
Name |
Accession |
Description |
Interval |
E-value |
| proY |
PRK10580 |
putative proline-specific permease; Provisional |
1-455 |
0e+00 |
|
putative proline-specific permease; Provisional
Pssm-ID: 182566 [Multi-domain] Cd Length: 457 Bit Score: 765.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 1 MENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
Cdd:PRK10580 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 81 DNLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATI 160
Cdd:PRK10580 81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 161 IIMIAAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:PRK10580 241 MRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 321 VFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEVKALKFKVPG 400
Cdd:PRK10580 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 495066564 401 GVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRRDARLSA 455
Cdd:PRK10580 401 GVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAE 455
|
|
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
2-449 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 606.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:COG1113 8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATII 161
Cdd:COG1113 88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 162 IMIAA-GIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:COG1113 168 AFIVVgLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:COG1113 248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 321 VFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEVKALKFKVPG 400
Cdd:COG1113 328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 495066564 401 GVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRR 449
Cdd:COG1113 408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRR 456
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
6-449 |
4.50e-89 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 278.68 E-value: 4.50e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 6 KLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDNLGP 85
Cdd:TIGR01773 9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 86 LAGYITGWTYC-FEILIVAIADVTAFGIyMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATiIIMI 164
Cdd:TIGR01773 89 WAGFTIGWLYWwFWVLVIPLEAIAAAGI-LQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIA-IIAF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 165 AAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRIL 244
Cdd:TIGR01773 167 IILGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRII 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 245 VFYVGTLFVIMSIYPWNEVGTNGS-PFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFA 323
Cdd:TIGR01773 247 VFYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 324 KTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSAdEVKALKFKVPGGVA 403
Cdd:TIGR01773 327 KLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKA-NGEAIKIRMWLYPW 405
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 495066564 404 TTIVGLIFLAFIIALIGYHPDTRISLY-VGFAWIALLLVGWVFKRRR 449
Cdd:TIGR01773 406 LTWLVIIFICGILVSMLFIPSMRDEVLlTGLLTIIVLCSYLVFARRK 452
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
15-449 |
2.93e-84 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 266.49 E-value: 2.93e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 15 HIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDNLGPLAGYITGW 93
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 94 TYCFEILIVAIADVTAFGIYMGVW--FPTVPH-WVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATIIIMIAAGIGI 170
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 171 IVWGIGNggQPTGIHNLWSNGG--FFANGWIGTVMA-LQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRILVFY 247
Cdd:pfam00324 161 LSGGNPN--DGAIFRYLGDNGGknNFPPGFGKGFISvFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 248 VGTLFVIMSIYPWNEVG------TNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKV 321
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 322 FAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSA--DEVKALKFKVP 399
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYqgRSIDELPFKAP 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 495066564 400 GGVATTIVGLIFLAFIIALIGYHPDTR-------------ISLYVGFAWIALLLVGWVFKRRR 449
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVKN 461
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| proY |
PRK10580 |
putative proline-specific permease; Provisional |
1-455 |
0e+00 |
|
putative proline-specific permease; Provisional
Pssm-ID: 182566 [Multi-domain] Cd Length: 457 Bit Score: 765.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 1 MENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
Cdd:PRK10580 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 81 DNLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATI 160
Cdd:PRK10580 81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 161 IIMIAAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:PRK10580 241 MRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 321 VFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEVKALKFKVPG 400
Cdd:PRK10580 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 495066564 401 GVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRRDARLSA 455
Cdd:PRK10580 401 GVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAE 455
|
|
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
2-449 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 606.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:COG1113 8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATII 161
Cdd:COG1113 88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 162 IMIAA-GIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:COG1113 168 AFIVVgLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:COG1113 248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 321 VFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEVKALKFKVPG 400
Cdd:COG1113 328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 495066564 401 GVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRR 449
Cdd:COG1113 408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRR 456
|
|
| LysP |
COG0833 |
Amino acid permease [Amino acid transport and metabolism]; |
1-449 |
5.07e-133 |
|
Amino acid permease [Amino acid transport and metabolism];
Pssm-ID: 440595 [Multi-domain] Cd Length: 467 Bit Score: 391.46 E-value: 5.07e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 1 MENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYA 79
Cdd:COG0833 4 SEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 80 QDNLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVAT 159
Cdd:COG0833 84 TRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVIT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 160 IIIMIAAGIGIIVWGIGNggQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSV 239
Cdd:COG0833 164 VIAFIIVGLLMIFGIIGG--HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 240 PLRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP 319
Cdd:COG0833 242 FWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 320 KVFAKTSRRGIP----WVTVVVMCFAMLLAVYlnyiMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSAD--EVKA 393
Cdd:COG0833 322 KIFAKLNKRGVPlnalLATMAVGLLALLSSFF----GAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQggDLED 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 495066564 394 LKFKVPGGVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRR 449
Cdd:COG0833 398 LKYKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKKT 453
|
|
| PRK11049 |
PRK11049 |
D-alanine/D-serine/glycine permease; Provisional |
2-455 |
1.81e-127 |
|
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830 Cd Length: 469 Bit Score: 377.54 E-value: 1.81e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:PRK11049 13 PAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFK-VATI 160
Cdd:PRK11049 93 LLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKiVAIV 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 161 IIMIAAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:PRK11049 173 ALIVVGLVMVAMHFQSPTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:PRK11049 253 IRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 321 VFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPE--NVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEvKALKFKV 398
Cdd:PRK11049 333 AFAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLH-EKSIYKM 411
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 495066564 399 PGGVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRRDARLSA 455
Cdd:PRK11049 412 PLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAELR 468
|
|
| PRK10249 |
PRK10249 |
phenylalanine transporter; Provisional |
2-449 |
5.46e-120 |
|
phenylalanine transporter; Provisional
Pssm-ID: 236667 Cd Length: 458 Bit Score: 358.14 E-value: 5.46e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:PRK10249 14 NQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYK 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVatII 161
Cdd:PRK10249 94 YWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKV--LA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 162 IMIAAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPL 241
Cdd:PRK10249 172 IIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVY 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 242 RILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKV 321
Cdd:PRK10249 252 RILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKF 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 322 FAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSAdEVKALKFKVPGG 401
Cdd:PRK10249 332 LTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRR-QGRETQFKALLY 410
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 495066564 402 VATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRR 449
Cdd:PRK10249 411 PFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRRK 458
|
|
| PRK10238 |
PRK10238 |
aromatic amino acid transporter AroP; |
2-455 |
1.64e-119 |
|
aromatic amino acid transporter AroP;
Pssm-ID: 182324 [Multi-domain] Cd Length: 456 Bit Score: 356.96 E-value: 1.64e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:PRK10238 5 QHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVaTII 161
Cdd:PRK10238 85 YWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKV-IAV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 162 IMIAAGIGIIVWGIGNGGQPTgIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPL 241
Cdd:PRK10238 164 VAMIIFGGWLLFSGNGGPQAT-VSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 242 RILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKV 321
Cdd:PRK10238 243 RILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 322 FAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEVKAlKFKVPGG 401
Cdd:PRK10238 323 LASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVT-RFPALLY 401
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 495066564 402 VATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRRDARLSA 455
Cdd:PRK10238 402 PLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKA 455
|
|
| PRK10746 |
PRK10746 |
putative transport protein YifK; Provisional |
2-446 |
4.34e-113 |
|
putative transport protein YifK; Provisional
Pssm-ID: 182694 Cd Length: 461 Bit Score: 340.64 E-value: 4.34e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:PRK10746 3 DNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATII 161
Cdd:PRK10746 83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 162 IMIAAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPL 241
Cdd:PRK10746 163 VMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 242 RILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKV 321
Cdd:PRK10746 243 RILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 322 FAKTSRRGIPWVTVVVMCFAMLLAVYLNYIM--PENVFLVIASLATFATVWVWIMILLSQVAFRRRlSADEVKALKFKVP 399
Cdd:PRK10746 323 MAKVSRHGVPVAGVAVSILILLVGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRRA-HKAAIASHPFRSI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 495066564 400 GGVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALL-LVGWVFK 446
Cdd:PRK10746 402 LFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVtLIYKVFG 449
|
|
| PRK15049 |
PRK15049 |
L-asparagine permease; |
3-453 |
3.33e-90 |
|
L-asparagine permease;
Pssm-ID: 185009 Cd Length: 499 Bit Score: 283.05 E-value: 3.33e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 3 NENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDN 82
Cdd:PRK15049 22 HEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREF 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 83 LGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVW--FPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATI 160
Cdd:PRK15049 102 LGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAI 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 161 IIMIAAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:PRK15049 182 VTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVI 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:PRK15049 262 WRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPS 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 321 VFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEVKALKFKVPG 400
Cdd:PRK15049 342 FMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLPG 421
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 495066564 401 GVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLV-GWVFKRRRDARL 453
Cdd:PRK15049 422 APFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLViGWFGVRKRVAEI 475
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
6-449 |
4.50e-89 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 278.68 E-value: 4.50e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 6 KLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDNLGP 85
Cdd:TIGR01773 9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 86 LAGYITGWTYC-FEILIVAIADVTAFGIyMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATiIIMI 164
Cdd:TIGR01773 89 WAGFTIGWLYWwFWVLVIPLEAIAAAGI-LQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIA-IIAF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 165 AAGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRIL 244
Cdd:TIGR01773 167 IILGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRII 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 245 VFYVGTLFVIMSIYPWNEVGTNGS-PFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFA 323
Cdd:TIGR01773 247 VFYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 324 KTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSAdEVKALKFKVPGGVA 403
Cdd:TIGR01773 327 KLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKA-NGEAIKIRMWLYPW 405
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 495066564 404 TTIVGLIFLAFIIALIGYHPDTRISLY-VGFAWIALLLVGWVFKRRR 449
Cdd:TIGR01773 406 LTWLVIIFICGILVSMLFIPSMRDEVLlTGLLTIIVLCSYLVFARRK 452
|
|
| PRK11387 |
PRK11387 |
S-methylmethionine permease; |
1-454 |
5.72e-89 |
|
S-methylmethionine permease;
Pssm-ID: 236904 Cd Length: 471 Bit Score: 278.66 E-value: 5.72e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 1 MENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYA 79
Cdd:PRK11387 6 SQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 80 QDNLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVAT 159
Cdd:PRK11387 86 ARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 160 IIIMIAAGIGIIVWGIGNG--GQPTGIHNLWSNGgFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAIN 237
Cdd:PRK11387 166 ILAFIVLGGAAIFGFIPMQdgSPAPGLRNLTAEG-WFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIR 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 238 SVPLRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGS 317
Cdd:PRK11387 245 TTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGT 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 318 APKVFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSAD--EVKALK 395
Cdd:PRK11387 325 LPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHLRDgkALSELA 404
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 495066564 396 FKVPGGVATTIVGLIFLAFIIALIGYHPDTRISLYVGFAWIALLLVGWVFKRRRDARLS 454
Cdd:PRK11387 405 YRAPWYPLTPILGFVLCLLACVGLAFDPSQRIALWCGIPFVALCYGAYYLTQRLKRNMT 463
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
15-449 |
2.93e-84 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 266.49 E-value: 2.93e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 15 HIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDNLGPLAGYITGW 93
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 94 TYCFEILIVAIADVTAFGIYMGVW--FPTVPH-WVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATIIIMIAAGIGI 170
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 171 IVWGIGNggQPTGIHNLWSNGG--FFANGWIGTVMA-LQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRILVFY 247
Cdd:pfam00324 161 LSGGNPN--DGAIFRYLGDNGGknNFPPGFGKGFISvFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 248 VGTLFVIMSIYPWNEVG------TNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKV 321
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 322 FAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSA--DEVKALKFKVP 399
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYqgRSIDELPFKAP 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 495066564 400 GGVATTIVGLIFLAFIIALIGYHPDTR-------------ISLYVGFAWIALLLVGWVFKRRR 449
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVKN 461
|
|
| 2A0310 |
TIGR00913 |
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines] |
8-421 |
5.31e-77 |
|
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273334 Cd Length: 478 Bit Score: 247.97 E-value: 5.31e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 8 KRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAAS-SFSRYAQDNLGP 85
Cdd:TIGR00913 1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSgSFATYASRFVDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 86 LAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATiIIMIA 165
Cdd:TIGR00913 81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILA-IIGFI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 166 AGIGIIVWGIGNGGQPTGIHnLWSNGGFFANGWI-----GTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVP 240
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFR-YWHDPGAFAGGTIggrfkGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 241 LRILVFYVGTLFVIMSIYPWNE---------VGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHG 311
Cdd:TIGR00913 239 WRILVFYILTLFLIGFLVPYNDprllsssssSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 312 MAEQGSAPKVFAKTSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSADEV 391
Cdd:TIGR00913 319 LAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGR 398
|
410 420 430
....*....|....*....|....*....|..
gi 495066564 392 --KALKFKVPGGVATTIVGLIFLAFIIALIGY 421
Cdd:TIGR00913 399 slDELPYKSQTGPYGSYYALFFNILILIAQGY 430
|
|
| PRK10836 |
PRK10836 |
lysine transporter; Provisional |
7-384 |
1.98e-71 |
|
lysine transporter; Provisional
Pssm-ID: 182767 Cd Length: 489 Bit Score: 233.94 E-value: 1.98e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 7 LKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDNLGP 85
Cdd:PRK10836 13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 86 LAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATiIIMIA 165
Cdd:PRK10836 93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTT-VIVFI 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 166 AGIGIIVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRILV 245
Cdd:PRK10836 172 IVGVLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 246 FYVGTLFVIMSIYPW-------NEVG-TNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGS 317
Cdd:PRK10836 252 FYVFAILIISLIIPYtdpsllrNDVKdISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGK 331
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 495066564 318 APKVFAKTSRRGIP----WVTVVVMCFAMLLAVYLNyimpENVFLVIASLATFATVWVWIMILLSQVAFRR 384
Cdd:PRK10836 332 APRIFAKLSRGGVPrnalYATTVIAGLCFLTSMFGN----QTVYLWLLNTSGMTGFIAWLGIAISHYRFRR 398
|
|
| PRK10197 |
PRK10197 |
GABA permease; |
19-429 |
3.03e-59 |
|
GABA permease;
Pssm-ID: 182297 Cd Length: 446 Bit Score: 200.62 E-value: 3.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 19 MALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDNLGPLAGYITGWTYCFE 98
Cdd:PRK10197 2 LSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 99 ILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVaTIIIMIAAGIGIIVWGIGNG 178
Cdd:PRK10197 82 WVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV-IAILAFIFLGAVAISGFYPY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 179 GQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRILVFYVGTLFVIMSIY 258
Cdd:PRK10197 161 AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 259 PWNEVGTNG-SPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGIPWVTVVV 337
Cdd:PRK10197 241 PWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 338 MCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRLSAdEVKALKFKVPGGVATTIVGLIFLAFIIA 417
Cdd:PRK10197 321 STGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRA-EGSEIRLRMWLYPWLTWLVIGFITFVLV 399
|
410
....*....|..
gi 495066564 418 LIGYHPDTRISL 429
Cdd:PRK10197 400 VMLFRPAQQLEV 411
|
|
| PotE |
COG0531 |
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; |
2-453 |
7.57e-55 |
|
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain] Cd Length: 438 Bit Score: 188.57 E-value: 7.57e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 2 ENENKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQD 81
Cdd:COG0531 4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWVWVLSVVLIICAINLMSVKVFGELEFWFSFFKVATII 161
Cdd:COG0531 84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 162 IMIAAGIgiivwgignggqPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPL 241
Cdd:COG0531 164 LFIVVGL------------FAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 242 RILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKV 321
Cdd:COG0531 232 IVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 322 FAKTS-RRGIPWVTVVVMCFAMLLAVylnyIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRlsaDEVKALKFKVPG 400
Cdd:COG0531 312 FAKVHpRFGTPVNAILLTGVIALLLL----LLGAASFTALASLASVGVLLAYLLVALAVIVLRRR---RPDLPRPFRVPL 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 495066564 401 GVaTTIVGLIFLAFIIALIGYhpdtrISLYVGFAWIALLLVGWVFKRRRDARL 453
Cdd:COG0531 385 PL-IPILGILLCLFLLYLLGP-----GALLIGLVLLAIGLLLYLLYRRRHPKL 431
|
|
| AA_permease_2 |
pfam13520 |
Amino acid permease; |
18-445 |
1.40e-22 |
|
Amino acid permease;
Pssm-ID: 404414 [Multi-domain] Cd Length: 427 Bit Score: 99.31 E-value: 1.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 18 FMALGSAIGTGLFYGSAdaIKMAGPSVLLAYIIGGVAAYIIMR-ALGEMSVHNPAASSFSRYAQDNLGPLAGYITGWTYC 96
Cdd:pfam13520 8 ALVIGSVIGSGIFVAPL--VASGGPALIVWGWIAAIIFSLAVGlVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNW 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 97 FEILIVAIA-DVTAFGIYMGVWFPTVPHWVWVL-----SVVLIICAINLMSVKVFGELEFWFSFFKVatiiimIAAGIGI 170
Cdd:pfam13520 86 FAYVLGLASsASVAASYLLSALGPDLVPTTWLTygiaiAILIIFAIINIRGVRESAKIQNILGILKL------LLPLILI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 171 IVWGIGNGGQPTGIHNLWSNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGEAKDpaKSIPRAINSVPLRILVFYVGT 250
Cdd:pfam13520 160 IILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 251 LFVIMSIYPWNEVGTN---GSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP--KVFAKT 325
Cdd:pfam13520 238 NIAFFGVVPDDEIALSsglGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 326 SRRGIPWVTVVVmCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQVAFRRRlsadevKALKFKVPGGVATT 405
Cdd:pfam13520 318 NKFGSPIRAIIL-TAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKK------RPDLGRIPGRWPVA 390
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 495066564 406 IVGLIFLAFIIALIGYHPDTRIslyVGFAWIALLLVGWVF 445
Cdd:pfam13520 391 IFGILFSLFLIVALFFPPVGPA---TGSSLNYAIILIVAF 427
|
|
| 2A0303 |
TIGR00906 |
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ... |
4-446 |
5.01e-21 |
|
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain] Cd Length: 557 Bit Score: 95.65 E-value: 5.01e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 4 ENKLKRGLSTRHIRFMALGSAIGTGLF-YGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDN 82
Cdd:TIGR00906 23 ESKMKRCLTTWDLMALGIGSTIGAGIYvLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVT 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 83 LGPLAGYITGWTYCFEILI----VAIADVTAFG------------IYMGVWFPTVPHWVWVLSV--VLIICAINLMSVKV 144
Cdd:TIGR00906 103 VGELWAFITGWNLILEYVIgtaaVARSWSAYFDellnkqigqfrrTYFKLNYDGLAEYPDFFAVclILLLAVLLSFGVKE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 145 FGELEFWFSFFKVATIIIMIAAGIGIIVWGIGNGGQPTGihnlwsNGGFFANGWIGTVMALQMVMFAYGGIEIIGITAGE 224
Cdd:TIGR00906 183 SAWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEKG------AGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEE 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 225 AKDPAKSIPRAINSVPLRILVFYVGTLFVIMSIYPWNEVGTNgSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFG 304
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 305 VGRMLHGMAEQGSAPKVFAK-TSRRGIPWVTVVVMCFAMLLAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQV--A 381
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQiNSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPglV 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 382 FRRRLSADEVKALKFKVPG-----------GVATTIVGLIFLAFIIALIGYHPDTR----ISLYVGFAWIALLLVGWVFK 446
Cdd:TIGR00906 416 YDQAKDTDEKDTLDSWVPFtsksesqsegfSLRTLFSGLILGLSILTTYGRAAIAEeawsIALLTLFLVLFLLVVLTIWR 495
|
|
| 2A0308 |
TIGR00911 |
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ... |
22-443 |
6.93e-11 |
|
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain] Cd Length: 501 Bit Score: 64.00 E-value: 6.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 22 GSAIGTGLFYGSADAIKMAGpSVLLAYIIGGVAAYI-IMRAL--GEMSVHNPAASSFSRYAQDNLGPLAGYITGWTYCFE 98
Cdd:TIGR00911 55 GTIIGSGIFVSPKGVLKNAG-SVGLALIMWAVCGIFsIVGALvyAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 99 ILIVAIADVT-AFGIY-MGVWFPT--VPHWVWVL---SVVLIICAINLMSVKVFGELEFWFSFFKVATIIIMIAAGIGII 171
Cdd:TIGR00911 134 IRPGSQAVNAlNFAIYiLTPVFPDceVPEWAIRLvavLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 172 VWGIGNGGQPtgiHNLWSNGGFFANGWigtVMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAI-NSVPLrILVFYVGT 250
Cdd:TIGR00911 214 GKGGVESLNP---KNAFEGTETSAGGI---VLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIiISMPI-VTFIYVLT 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 251 LFVIMSIYPWNEVgTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTS-RRG 329
Cdd:TIGR00911 287 NIAYFTVLSPEEL-LASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHvKRL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 330 IPWVTVVVMCFAMLLavylnYIMPENVFLVIaSLATFATVWVWIMILLSQVAFRRRLSADEVkalKFKVPggVATTIVGL 409
Cdd:TIGR00911 366 TPLPSLLIVCTLTLL-----MLFSGDIYSLI-NLISFANWLFNALAVAGLLWLRYKRPEMNR---PIKVP--LFFPVFFL 434
|
410 420 430
....*....|....*....|....*....|....
gi 495066564 410 IFLAFIIALIGYHPDTRISLYVGfawiaLLLVGW 443
Cdd:TIGR00911 435 LSCLFLIILSLYSPPVGCGVGFI-----IMLTGV 463
|
|
| PRK10644 |
PRK10644 |
arginine/agmatine antiporter; |
18-373 |
1.42e-08 |
|
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain] Cd Length: 445 Bit Score: 56.72 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 18 FMALGSAIGTGLFYGSADAIKMAGPSVL--LAYIIGGVAAYIIMRALGEMsvhNPAASSFSRYAQDNLGPLAGYITGWTY 95
Cdd:PRK10644 17 LMVAGNIMGSGVFLLPANLASTGGIAIYgwLVTIIGALGLSMVYAKMSSL---DPSPGGSYAYARRCFGPFLGYQTNVLY 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 96 CFEILIVAIADVTAFGIYMGVWFPTVPH-WVWVLSVVLIICA---INLMSVKVFGELEfwfsffKVATIIIMIAAGIGII 171
Cdd:PRK10644 94 WLACWIGNIAMVVIGVGYLSYFFPILKDpLVLTITCVVVLWIfvlLNIVGPKMITRVQ------AVATVLALIPIVGIAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 172 VWGignggqptgihnLWSNGGFFANGW-------IGTVMA-LQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRI 243
Cdd:PRK10644 168 FGW------------FWFRGETYMAAWnvsglgtFGAIQStLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 244 LVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITVAAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFA 323
Cdd:PRK10644 236 AVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFA 315
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 495066564 324 KTSRRGIPWVTVVVMcfAMLLAVYLNYIMPENV---FLVIASLATFATVWVWI 373
Cdd:PRK10644 316 RVNKAGTPVAGLLIV--GVLMTIFQLSSISPNAskeFGLVSSVSVIFTLVPYL 366
|
|
| frlA |
PRK11357 |
amino acid permease; |
5-373 |
7.22e-08 |
|
amino acid permease;
Pssm-ID: 183096 [Multi-domain] Cd Length: 445 Bit Score: 54.48 E-value: 7.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 5 NKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVL--LAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQDN 82
Cdd:PRK11357 4 QELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 83 LGPLAGYITGWTyCF------EILIVAIADVTAFGIYMGvWFPTVPHWVWVLsVVLIICAINLMSVKVFGELEFWFSFFK 156
Cdd:PRK11357 84 GSRPLAFLSGWA-SFwandapSLSIMALAIVSNLGFLTP-IDPLLGKFIAAG-LIIAFMLLHLRSVEGGAAFQTLITIAK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 157 VATIIIMIaagigiivwgignggqptGIHNLWSNGGFF---------ANGWIGTVMA-LQMVMFAYGGIEIIGITAGEAK 226
Cdd:PRK11357 161 IIPFTIVI------------------GLGIFWFKAENFaaptttaigATGSFMALLAgISATSWSYTGMASICYMTGEIK 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 227 DPAKSIPRAINSVPLRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHM-GITVAAG----ILNFVVLTASLSainSD 301
Cdd:PRK11357 223 NPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpALGSTAGifvaITAMIVILGSLS---SC 299
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 495066564 302 VFGVGRMLHGMAEQGSAPKVFAKTS-RRGIPWVTVVVMCFAMLLAVYLNYIMP-ENVFLVIASLATFATVWVWI 373
Cdd:PRK11357 300 VMYQPRLEYAMAKDNLFFKCFGHVHpKYNTPDVSIILQGALGIFFIFVSDLTSlLGYFTLVMCFKNTLTFGSII 373
|
|
| 2A0309 |
TIGR00912 |
spore germination protein (amino acid permease); This model describes spore germination ... |
11-275 |
6.36e-06 |
|
spore germination protein (amino acid permease); This model describes spore germination protein GerKB and paralogs from Bacillus subtilis, Clostridium tetani, and other known or predicted endospore-forming members of the Firmicutes (low-GC Gram positive bacteria). Members show some similarity to amino acid permeases. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273333 Cd Length: 359 Bit Score: 48.05 E-value: 6.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 11 LSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPaASSFSRYAQDNLGPLAGYI 90
Cdd:TIGR00912 3 ISSKQLIFLISSTMIGSGLLTLPALVSQSAGQDGWISIILGGLIIIFLLCLMIKIMSKFP-EKNFSEILSKYLGKILGRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 91 TGWTYCFEILIVAIADVTAFGIYMGVW-FPTVPhwVWVLSVVLIICAINLMSvKVFGELEFWFSFFKVATIIIMIAAGIG 169
Cdd:TIGR00912 82 LSILFILYFFLIAAYLIRIFADFIKTYlLPRTP--IIVIIILIIIVSIYIVR-KGIEVLLRTAEILLIIFLILFILVLIL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 170 IivwgignggqPTGIHNLWSNGGFFANGWIGTV-MALQMVMFAYGGIEIIGITAGEAKDpAKSIPRAINSVPLRILVFYV 248
Cdd:TIGR00912 159 L----------APKLGNIKNLLPVLENGLSPILkGAYPVVTFAFGEIEIFFLLFPLLSK-KKKIKKSIIKAIIIGVLLYI 227
|
250 260
....*....|....*....|....*..
gi 495066564 249 GTLFVIMSIYPWNEVGTNGSPFVLTFQ 275
Cdd:TIGR00912 228 LTTFVSISVFGGNVTKNLYWPTLELIK 254
|
|
| potE |
PRK10655 |
putrescine transporter; Provisional |
188-338 |
8.61e-04 |
|
putrescine transporter; Provisional
Pssm-ID: 182622 Cd Length: 438 Bit Score: 41.55 E-value: 8.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 188 WSNGGFFANGW----------IGTVMAlqMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRILVFYVGTLFVIMSI 257
Cdd:PRK10655 170 WFSPSLYVAAWnphhlpffsaVGSSIA--MTLWAFLGLESACANSDAVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGI 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 258 YPWNEVGTNGSPFVLTFQHM-GITVAAGILNFVVLTASLSAINSDvFGVGRMLHGMAEQGSAPKVFAKTSRRGIPWVTVV 336
Cdd:PRK10655 248 VPNMELANSTAPFGLAFAQMfNPTVGKIVMALMVMSCCGSLLGWQ-FTIAQVFKSSADEGYFPKIFSRVTKVDAPVQGML 326
|
..
gi 495066564 337 VM 338
Cdd:PRK10655 327 II 328
|
|
| cadB |
PRK10435 |
cadaverine/lysine antiporter; |
202-331 |
1.03e-03 |
|
cadaverine/lysine antiporter;
Pssm-ID: 182458 Cd Length: 435 Bit Score: 41.27 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495066564 202 VMALQMVMFAYGGIEIIGITAGEAKDPAKSIPRAINSVPLRILVFYVGTLFVIMSIYPWNEVGTNGSPFVLTFQHMGITV 281
Cdd:PRK10435 190 IKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNW 269
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 495066564 282 AAGILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGIP 331
Cdd:PRK10435 270 AAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDKNGIP 319
|
|
| |
