|
Name |
Accession |
Description |
Interval |
E-value |
| FlhB |
COG1377 |
Flagellar biosynthesis protein FlhB [Cell motility]; |
2-346 |
8.75e-139 |
|
Flagellar biosynthesis protein FlhB [Cell motility];
Pssm-ID: 440987 Cd Length: 352 Bit Score: 397.95 E-value: 8.75e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTR-DAAAINRALGHI 80
Cdd:COG1377 6 DGEKTEEPTPKRLRDAREKGQVARSRELTTALVLLAGLLLLLFLGPSLAERLGELLRSLLSFARALAlDPADLLALLGAL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 81 GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR 160
Cdd:COG1377 86 LLEALLALLPLLLVLALAALLANLLQGGFLFSTKALKPKFSRLNPISGLKRLFSLRALVELLKSLLKLLLVGGVAYLVLR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 161 ALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRK 240
Cdd:COG1377 166 GELPELLALAALPLAAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWEHEKKLRMTKQEVKDEHKESEGDPEVKGRIR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 241 EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-Q 319
Cdd:COG1377 246 QLQREMARRRMMAAVPKADVVITNPTHYAVALKYDPGKMGAPVVVAKGADEVALRIREIAREHGVPIVENPPLARALYaT 325
|
330 340
....*....|....*....|....*..
gi 495850869 320 VELGDAIPEPLFETVAVVLRWVDELGR 346
Cdd:COG1377 326 VEVGQEIPEELYQAVAEVLAYVYQLKR 352
|
|
| Bac_export_2 |
pfam01312 |
FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, ... |
4-341 |
4.69e-136 |
|
FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.
Pssm-ID: 460157 Cd Length: 338 Bit Score: 390.65 E-value: 4.69e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 4 EKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSeHTRDAAAINRALGHIGIQ 83
Cdd:pfam01312 1 EKTEEPTPKKLRDAREKGQVAKSRELTSAAVLLAGLLALLFLGPFLLERLAELFRSVLSFD-RAADPAALLALLLALLLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 84 GLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRALM 163
Cdd:pfam01312 80 LLLLLLPLLLVLLLAALLANLLQVGFLFSTKALKPKFSKLNPISGLKRIFSLRSLVELLKSLLKVAVVGAVAYLVLRGNL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 164 PMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRKEFA 243
Cdd:pfam01312 160 PELLALADLPLEAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWQFEKKLKMTKQEVKDEYKESEGDPEIKGRIRQLQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 244 KELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-QVEL 322
Cdd:pfam01312 240 REMARRRMMAEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGADELALRIREIAREHGVPIVENPPLARALYaTVEV 319
|
330
....*....|....*....
gi 495850869 323 GDAIPEPLFETVAVVLRWV 341
Cdd:pfam01312 320 GQEIPEELYQAVAEVLAYV 338
|
|
| flhB |
PRK05702 |
flagellar type III secretion system protein FlhB; |
2-346 |
5.30e-115 |
|
flagellar type III secretion system protein FlhB;
Pssm-ID: 235569 Cd Length: 359 Bit Score: 337.90 E-value: 5.30e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTR-DAAAINRALGHI 80
Cdd:PRK05702 6 DDEKTEEPTPKKLEKAREKGQVPRSRELNTAASLLAGLVVLWFFGPSLARRLSGMLRALFSFDREIIfDPNDVLSLFLLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 81 GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR 160
Cdd:PRK05702 86 LLEALLALLPILLLLVLAALLAPVLQGGLLFSPKALKPKFSKLNPLKGLKRMFSAQGLVELLKSLLKVLLVGGVAYFVLW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 161 ALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRK 240
Cdd:PRK05702 166 SNLDELLSLAAEPLEAALGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVKGRIR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 241 EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-Q 319
Cdd:PRK05702 246 QLQREMARRRMMAAVPKADVVITNPTHYAVALKYDRGKMAAPVVVAKGVDEVALKIREIAREHNVPIVENPPLARALYaT 325
|
330 340
....*....|....*....|....*..
gi 495850869 320 VELGDAIPEPLFETVAVVLRWVDELGR 346
Cdd:PRK05702 326 VEIGQEIPEELYKAVAEVLAYVYQLKR 352
|
|
| FlhB_rel_III |
TIGR01404 |
type III secretion protein, YscU/HrpY family; This model represents one of several families of ... |
3-344 |
2.44e-111 |
|
type III secretion protein, YscU/HrpY family; This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 130471 Cd Length: 342 Bit Score: 328.08 E-value: 2.44e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 3 EEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTRDAAainraLGHIGI 82
Cdd:TIGR01404 1 AEKTEKPTPKKLRDARKKGQVAKSKDLTSAVLLLAGFFYLLSLASVFEEMLIALLILPLDFDDQPFAYA-----LAQVLS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 83 QGLLLMLPFLAAC----LVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVG 158
Cdd:TIGR01404 76 GLLQLILTVLLPLlaivLLAGVLSGLLQVGFVLATEALKPDLSKLNPISGLKQIFSLRSLKELLKSILKLVALALIFYLF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 159 IRALMPMIIGLAYETPLDVAQIaWRTLGMLFALGVLL-FVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKD 237
Cdd:TIGR01404 156 LKNYLKELFALPYCGLDGLAPI-VGELLKLLILVCLGfFLVVGLADFAFQRYLFMKDLKMSKDEVKREYKEQEGDPEIKS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 238 KRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARAL 317
Cdd:TIGR01404 235 KRRELHQEILSEQLKSDVKRSTLVVANPTHIAIGIYYKPGETPLPLIICKGTDAQALAVRAYAEEAGIPVVRDIPLARQL 314
|
330 340
....*....|....*....|....*...
gi 495850869 318 Y-QVELGDAIPEPLFETVAVVLRWVDEL 344
Cdd:TIGR01404 315 YrTARVGQYIPEELFEAVAELLRWLEQV 342
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FlhB |
COG1377 |
Flagellar biosynthesis protein FlhB [Cell motility]; |
2-346 |
8.75e-139 |
|
Flagellar biosynthesis protein FlhB [Cell motility];
Pssm-ID: 440987 Cd Length: 352 Bit Score: 397.95 E-value: 8.75e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTR-DAAAINRALGHI 80
Cdd:COG1377 6 DGEKTEEPTPKRLRDAREKGQVARSRELTTALVLLAGLLLLLFLGPSLAERLGELLRSLLSFARALAlDPADLLALLGAL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 81 GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR 160
Cdd:COG1377 86 LLEALLALLPLLLVLALAALLANLLQGGFLFSTKALKPKFSRLNPISGLKRLFSLRALVELLKSLLKLLLVGGVAYLVLR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 161 ALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRK 240
Cdd:COG1377 166 GELPELLALAALPLAAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWEHEKKLRMTKQEVKDEHKESEGDPEVKGRIR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 241 EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-Q 319
Cdd:COG1377 246 QLQREMARRRMMAAVPKADVVITNPTHYAVALKYDPGKMGAPVVVAKGADEVALRIREIAREHGVPIVENPPLARALYaT 325
|
330 340
....*....|....*....|....*..
gi 495850869 320 VELGDAIPEPLFETVAVVLRWVDELGR 346
Cdd:COG1377 326 VEVGQEIPEELYQAVAEVLAYVYQLKR 352
|
|
| Bac_export_2 |
pfam01312 |
FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, ... |
4-341 |
4.69e-136 |
|
FlhB HrpN YscU SpaS Family; This family includes the following members: FlhB, HrpN, YscU, SpaS, HrcU SsaU and YopU. All of these proteins export peptides using the type III secretion system. The peptides exported are quite diverse.
Pssm-ID: 460157 Cd Length: 338 Bit Score: 390.65 E-value: 4.69e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 4 EKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSeHTRDAAAINRALGHIGIQ 83
Cdd:pfam01312 1 EKTEEPTPKKLRDAREKGQVAKSRELTSAAVLLAGLLALLFLGPFLLERLAELFRSVLSFD-RAADPAALLALLLALLLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 84 GLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRALM 163
Cdd:pfam01312 80 LLLLLLPLLLVLLLAALLANLLQVGFLFSTKALKPKFSKLNPISGLKRIFSLRSLVELLKSLLKVAVVGAVAYLVLRGNL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 164 PMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRKEFA 243
Cdd:pfam01312 160 PELLALADLPLEAALALLGDLLLKLLLAVLLALLVIAAIDYPYQRWQFEKKLKMTKQEVKDEYKESEGDPEIKGRIRQLQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 244 KELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-QVEL 322
Cdd:pfam01312 240 REMARRRMMAEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGADELALRIREIAREHGVPIVENPPLARALYaTVEV 319
|
330
....*....|....*....
gi 495850869 323 GDAIPEPLFETVAVVLRWV 341
Cdd:pfam01312 320 GQEIPEELYQAVAEVLAYV 338
|
|
| EscU |
COG4792 |
Type III secretory pathway, EscU/YscU component [Intracellular trafficking, secretion, and ... |
1-344 |
4.42e-115 |
|
Type III secretory pathway, EscU/YscU component [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 443821 Cd Length: 344 Bit Score: 337.64 E-value: 4.42e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 1 MSEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTI-------GFDFsehtrdaaAI 73
Cdd:COG4792 1 MSSEKTEQPTPKKLRDARKKGQVAKSKDIVSAVQLLALLGYLLLEGDALVEHLQALILLpaqllnlPFDE--------AL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 74 NRALGHIGIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGV 153
Cdd:COG4792 73 NQLLGALLELLLRLVLPLLAVLILATILSNVAQVGFLFATEAIKPKLEKINPVENLKRIFSLRSLVELLKSLLKVVLLGL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 154 VLWVGIRALMPMIIGLAYetpLDVAQIAWRTLGMLFAL-GVLL--FVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESE 230
Cdd:COG4792 153 IFYYLLRGYLPTLVYLPY---CGLACAGPVVGALLKWLwGVLLgaYLVFGLADYLFQRYQFRKQLRMSKDEVKREYKDME 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 231 GDPEIKDKRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVAN 310
Cdd:COG4792 230 GDPEIKQKRRRLHREIQSGSLALNVKRSSVVVRNPTHIAVGLRYVPGETPLPVVLEKGEDARAQQIVKLAEEEGVPVVEN 309
|
330 340 350
....*....|....*....|....*....|....*
gi 495850869 311 PPLARALY-QVELGDAIPEPLFETVAVVLRWVDEL 344
Cdd:COG4792 310 IPLARALYaDAGLGEYIPEDLFEPVAEVLRLALLL 344
|
|
| flhB |
PRK05702 |
flagellar type III secretion system protein FlhB; |
2-346 |
5.30e-115 |
|
flagellar type III secretion system protein FlhB;
Pssm-ID: 235569 Cd Length: 359 Bit Score: 337.90 E-value: 5.30e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTR-DAAAINRALGHI 80
Cdd:PRK05702 6 DDEKTEEPTPKKLEKAREKGQVPRSRELNTAASLLAGLVVLWFFGPSLARRLSGMLRALFSFDREIIfDPNDVLSLFLLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 81 GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR 160
Cdd:PRK05702 86 LLEALLALLPILLLLVLAALLAPVLQGGLLFSPKALKPKFSKLNPLKGLKRMFSAQGLVELLKSLLKVLLVGGVAYFVLW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 161 ALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRK 240
Cdd:PRK05702 166 SNLDELLSLAAEPLEAALGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVKGRIR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 241 EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-Q 319
Cdd:PRK05702 246 QLQREMARRRMMAAVPKADVVITNPTHYAVALKYDRGKMAAPVVVAKGVDEVALKIREIAREHNVPIVENPPLARALYaT 325
|
330 340
....*....|....*....|....*..
gi 495850869 320 VELGDAIPEPLFETVAVVLRWVDELGR 346
Cdd:PRK05702 326 VEIGQEIPEELYKAVAEVLAYVYQLKR 352
|
|
| FlhB_rel_III |
TIGR01404 |
type III secretion protein, YscU/HrpY family; This model represents one of several families of ... |
3-344 |
2.44e-111 |
|
type III secretion protein, YscU/HrpY family; This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 130471 Cd Length: 342 Bit Score: 328.08 E-value: 2.44e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 3 EEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTRDAAainraLGHIGI 82
Cdd:TIGR01404 1 AEKTEKPTPKKLRDARKKGQVAKSKDLTSAVLLLAGFFYLLSLASVFEEMLIALLILPLDFDDQPFAYA-----LAQVLS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 83 QGLLLMLPFLAAC----LVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVG 158
Cdd:TIGR01404 76 GLLQLILTVLLPLlaivLLAGVLSGLLQVGFVLATEALKPDLSKLNPISGLKQIFSLRSLKELLKSILKLVALALIFYLF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 159 IRALMPMIIGLAYETPLDVAQIaWRTLGMLFALGVLL-FVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKD 237
Cdd:TIGR01404 156 LKNYLKELFALPYCGLDGLAPI-VGELLKLLILVCLGfFLVVGLADFAFQRYLFMKDLKMSKDEVKREYKEQEGDPEIKS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 238 KRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARAL 317
Cdd:TIGR01404 235 KRRELHQEILSEQLKSDVKRSTLVVANPTHIAIGIYYKPGETPLPLIICKGTDAQALAVRAYAEEAGIPVVRDIPLARQL 314
|
330 340
....*....|....*....|....*...
gi 495850869 318 Y-QVELGDAIPEPLFETVAVVLRWVDEL 344
Cdd:TIGR01404 315 YrTARVGQYIPEELFEAVAELLRWLEQV 342
|
|
| flhB |
TIGR00328 |
flagellar biosynthetic protein FlhB; FlhB and its functionally equivalent orthologs, from ... |
4-344 |
7.30e-103 |
|
flagellar biosynthetic protein FlhB; FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 129428 Cd Length: 347 Bit Score: 306.50 E-value: 7.30e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 4 EKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFsEHTRD--AAAINRALGHIG 81
Cdd:TIGR00328 1 EKTEEPTPKKLRKAREEGNVPKSREVNSAAVLLAGVLSLLFFGDGLADLLVVLMSFFLSF-ETSDIlnLGSLVGIFFQSI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 82 IQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRA 161
Cdd:TIGR00328 80 REVLLLLLPIFVLLLVVGVLSNIAQFGFLFTTKPLKPKFSKINPIKGLKRLFSLQSLVELLKSLLKVFLVSFVAYFVLRN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 162 LMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRKE 241
Cdd:TIGR00328 160 SLGELLSLSLYSLVQAITNFLDIAKSLLILVLLLLLVIAVFDYFFQRWQYIKSLKMTKQEVKDELKQSEGDPEVKGRIRQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 242 FAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-QV 320
Cdd:TIGR00328 240 MQREAARRRMMQEVPKADVVITNPTHYAVALKYDPGKMPAPVVVAKGVDELALKIKEIARENNVPIVENPPLARALYrQV 319
|
330 340
....*....|....*....|....
gi 495850869 321 ELGDAIPEPLFETVAVVLRWVDEL 344
Cdd:TIGR00328 320 EIGQEIPPELYKAVAEVLAYVYKL 343
|
|
| PRK12721 |
PRK12721 |
EscU/YscU/HrcU family type III secretion system export apparatus switch protein; |
1-350 |
3.53e-76 |
|
EscU/YscU/HrcU family type III secretion system export apparatus switch protein;
Pssm-ID: 183700 Cd Length: 349 Bit Score: 238.42 E-value: 3.53e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 1 MSEeKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALM-----TIGFDFSEhtrdaaAINR 75
Cdd:PRK12721 1 MSE-KTEKPTEKKLRDARKKGQVVKSVEITSGVQLAALLLYFLLEGPSLVEAIIGLInstiqLLNKPFLY------ALTQ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 76 ALGHIGIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVL 155
Cdd:PRK12721 74 ILGAVLEVLLRFLLVLGAGLIVATVGTGIAQVGPLLASKAIGPKAEKINPVSNAKQIFSLKSVFELCKSLLKVVILSLIF 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 156 WVGIRALMPMIIGLAYetpLDVAQIAWRTLGMLFAL--GVLLF-VLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGD 232
Cdd:PRK12721 154 AYLLHYYAPSFAYLPY---CGAACGLPVVSTLIFWLwgGLLACyLVFGILDYSFQRYKIMKQLKMSKDDVKQEYKDSEGD 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 233 PEIKDKRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPP 312
Cdd:PRK12721 231 PEIKQKRRELQSEIQSGSLANNVKKSTAVVRNPTHIAVCLYYHPGETPLPRVLEKGKDAQALHIVKLAERNGIPVVENIP 310
|
330 340 350
....*....|....*....|....*....|....*....
gi 495850869 313 LARALY-QVELGDAIPEPLFETVAVVLRWVDELGRDHGD 350
Cdd:PRK12721 311 LARALFkEVECGDYIPETLFEPVAALLRMVMDIDYQHST 349
|
|
| PRK12772 |
PRK12772 |
fused FliR family export protein/FlhB family type III secretion system protein; |
2-341 |
3.27e-68 |
|
fused FliR family export protein/FlhB family type III secretion system protein;
Pssm-ID: 237199 [Multi-domain] Cd Length: 609 Bit Score: 224.94 E-value: 3.27e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 2 SEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTR-DAAAINRALGHI 80
Cdd:PRK12772 262 SDDKTEEATPKKKSDARKKGQIAKSKELALAITLLACTLVLSALGGYVANTLKETMIYFLNNYLNMNlNYNSLNSLAIIT 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 81 GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIkaiLIGVVLWVGIR 160
Cdd:PRK12772 342 LLRVAKIFLPVALPIMVFGVAANLLQTGFLFTKEPLKPDLKKLNPINGFKRMFSMRSVMELLKDLT---IITIVGIVGYK 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 161 ALMPMIIGLAYETPLDVAQIAWR----TLGMLFALGVLLfVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIK 236
Cdd:PRK12772 419 FLQDNYLDILNLGNLYLPYIITElkslVISIFFRITLIM-IIIAVADYVYQKYQYNKDLRMTKQEVKEEYKQDEGDPQIK 497
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 237 DKRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARA 316
Cdd:PRK12772 498 AKIKQKQREMAMQRMMQEVPKATVVVTNPTHIAVALKYEEGKDEAPKVVAKGADYVALKIKEIAKENDVPIIENKPLARL 577
|
330 340
....*....|....*....|....*.
gi 495850869 317 LY-QVELGDAIPEPLFETVAVVLRWV 341
Cdd:PRK12772 578 IYkKVEIDQEIPQDMYQAVAEILAIV 603
|
|
| PRK08156 |
PRK08156 |
EscU/YscU/HrcU family type III secretion system export apparatus switch protein; |
4-318 |
2.64e-60 |
|
EscU/YscU/HrcU family type III secretion system export apparatus switch protein;
Pssm-ID: 236168 Cd Length: 361 Bit Score: 197.92 E-value: 2.64e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 4 EKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDyFSDHMRALMTI---GFDFSehtrdaaaINRALGHI 80
Cdd:PRK08156 3 NKTEKPTKKKLRDSAKKGQSFKSKDLITAVVLLGGIAYLVSFGS-FSEFMSIYKRIladNFDIN--------IGDYFLAV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 81 GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLinllKLIIKAIL-IGV------ 153
Cdd:PRK08156 74 MIIFLKILIPFLLLCLLAGALPTLLQTRFVLATEAIKLNFSALNPVKGLKKIFSLRTV----KEFVKALLyLIVfaltay 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 154 VLWVGIRALmpmIIGLAYETPLDVAQIaWRTLGM---LFALGVLLFVLVgaADWSVQRWLFIRDKRMSKDEQKREVKESE 230
Cdd:PRK08156 150 VFWKNYKKE---IFSQLNGNIVGLIVI-WRELLVklvLTFLACALIVLI--LDFIAEYFLHMKDMKMDKQEVKREYKEQE 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 231 GDPEIKDKRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVAN 310
Cdd:PRK08156 224 GNPEIKSKRREAHQEILSEQVKSDIRNSRLIVANPTHIAIGIYFNPELAPIPFISVRETNQRALAVRAYAEKVGVPVVRD 303
|
....*...
gi 495850869 311 PPLARALY 318
Cdd:PRK08156 304 IKLARRLY 311
|
|
| flhB |
PRK12468 |
flagellar biosynthesis protein FlhB; Reviewed |
4-356 |
4.03e-58 |
|
flagellar biosynthesis protein FlhB; Reviewed
Pssm-ID: 171522 Cd Length: 386 Bit Score: 192.94 E-value: 4.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 4 EKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIG--FDFSEHTRDAAAInRALGHIG 81
Cdd:PRK12468 8 EKSEEPTASKLEKAREKGQIPRSRELTSMLMLGAGLTILWMSGESMARQLSAMVAQGlhFDHSMVSNDKQML-RQIGMLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 82 IQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRA 161
Cdd:PRK12468 87 RQTLLAMLPIFAGLVIVALAVPMLLGGVLFSGESIKFDLKRMSPVAGLKRMFSSQALAELLKAILKATLVGWVTGLFLWH 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 162 LMPMIIGLAYETPLDVAQIAWRTL---GMLFALGVLLFVlvgAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIK-- 236
Cdd:PRK12468 167 NWPDMMRLIAAPPVAALGDALHLIifcGLVVVLGLSPMV---GFDVFYQITSHIKKLRMTKQDIRDEFKNQEGDPHVKgr 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 237 --DKRKEFAKELVFGDprerVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLA 314
Cdd:PRK12468 244 irQQQRAMARRRMMVD----VPKADVIVTNPTHYAVALQYNESKMSAPKVLAKGAGAVALRIRELGAEHRIPLLEAPPLA 319
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 495850869 315 RALYQ-VELGDAIPEPLFETVAVVLRWVDELGRDHGDGdGALP 356
Cdd:PRK12468 320 RALFRhSEVGQHIPATLYAAVAEVLAWVYQLKRWKREG-GLIP 361
|
|
| PRK06298 |
PRK06298 |
type III secretion system protein; Validated |
4-351 |
8.82e-54 |
|
type III secretion system protein; Validated
Pssm-ID: 180519 Cd Length: 356 Bit Score: 180.82 E-value: 8.82e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 4 EKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTRDAAAINRALGHIGIQ 83
Cdd:PRK06298 3 EKTEKATPKRLRDARKKGQVAKSQDFPSAITFIVSMFLTFSLSSFFAKHLGSFLVSIFKTAPTNHDPVVTVYYLKNCLIL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 84 GLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRALM 163
Cdd:PRK06298 83 ILTASLPLLGAVAFVGVLVGFLIVGPTFSTEVFKPDIKKFNPIDNLKQKFKVKTLIELLKSILKISGAALILYIVLKNRV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 164 PMIIGLAYETPLDVAQIaWRTLGMLFALGV-LLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRKEF 242
Cdd:PRK06298 163 PLIIETAGVPPLVTAQI-FKEILYKAVTSIgIFFLVVAVLDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGRRRQI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 243 AKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALY-QVE 321
Cdd:PRK06298 242 AQEIAYEDTSSQVKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRIIAEAEKYGVPIMRNVPLAHQLLdEGK 321
|
330 340 350
....*....|....*....|....*....|
gi 495850869 322 LGDAIPEPLFETVAVVLRWVDELGRDHGDG 351
Cdd:PRK06298 322 ELKFIPESTYEAIGEILLYITSLNAQNPNN 351
|
|
| flhB |
PRK13109 |
flagellar biosynthesis protein FlhB; Reviewed |
3-338 |
5.34e-50 |
|
flagellar biosynthesis protein FlhB; Reviewed
Pssm-ID: 183864 Cd Length: 358 Bit Score: 171.14 E-value: 5.34e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 3 EEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKS-AGDYFSDHMRALMTI-----GFDFsEHTRDAAAInra 76
Cdd:PRK13109 8 ESKTEEATERKVRDAIEKGDIPVSREAPVFASMLGLLIALAFfARGQAAQLTGDLAPLlddprGFSL-ETGADAMLL--- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 77 LGHIGIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLW 156
Cdd:PRK13109 84 LSRVALAAGRFLLPILLILAVCGLAASLLQNLPRFVLDRIQPKWSRISPMKGWTRIFGTSGQVEFLKSLFKFLSVSVVVL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 157 VGIRALMPMIIGLAYETPLDVAQIAWRT-LGMLFALGVLLFVLVgAAD--WSVQRWLfiRDKRMSKDEQKREVKESEGDP 233
Cdd:PRK13109 164 LLLRSERAKAVNAMFVDPSQLPELILTVaIRLVSAVAIATIVLV-ALDlvWARFHWR--RSLRMTKQEIKDEHKQAEGDP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 234 EIKDKRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPL 313
Cdd:PRK13109 241 SVKARLRSLAQDRARNRMLANVPRATLVIANPTHFAIALRYERSENPAPLVVAKGQDLIALKIREIAEENGIPVIEDKPL 320
|
330 340
....*....|....*....|....*.
gi 495850869 314 ARALYQ-VELGDAIPEPLFETVAVVL 338
Cdd:PRK13109 321 ARSLYDaVQVDQVIPAEFYRPVAQIL 346
|
|
| flhB |
PRK12773 |
flagellar biosynthesis protein FlhB; Reviewed |
3-346 |
8.99e-41 |
|
flagellar biosynthesis protein FlhB; Reviewed
Pssm-ID: 183737 Cd Length: 646 Bit Score: 151.75 E-value: 8.99e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 3 EEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFsdHMRA-------LMTIGF--DFSehtrdAAAI 73
Cdd:PRK12773 298 EGRTEPGSERRRREEREKGNVPKSPELPAAVVLLAGVILVYLMGEYF--FMRTyyilrkyIHGVGLrtDMS-----SESV 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 74 NRALGHIGIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPatGVKKLFSLR-SLINLLKLIIKAILIG 152
Cdd:PRK12773 371 TELLKNASTDLFTLLWPLLGITLVGAIIGNVAQVGFIFTPRALSFNFSRIRP--NFKKVLPTRqTLFNLGKSLAKVGLIA 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 153 VVLWVGI-RALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVlVGAADWSVQRWLFIRDKRMSKDEQKREVKESEG 231
Cdd:PRK12773 449 WVSYIIIsKDFFPILLSGEMGLEQAVALVMNSSFKIFLIVGIILLA-ISIVDYLYQRYEYEESLKMTPSEAKREAKESDG 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 232 DPEIKDKRKEFAKELVfgDPRERVAK---AKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIV 308
Cdd:PRK12773 528 DRSLQARRRQLARDMM--NKRKMLAKvpeADVVITNPTHFAVALEYKPGIHKAPIVIAKGVDDFALLIIRIARENGVPTV 605
|
330 340 350
....*....|....*....|....*....|....*....
gi 495850869 309 ANPPLARALY-QVELGDAIPEPLFETVAVVLRWVDELGR 346
Cdd:PRK12773 606 EDRLQARGLYeEVELGAEVPQQFYRAIATILSRLESFRR 644
|
|
| YlqH |
COG2257 |
Type III secretion system substrate exporter, FlhB-like [Intracellular trafficking, secretion, ... |
269-352 |
8.01e-19 |
|
Type III secretion system substrate exporter, FlhB-like [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 441858 [Multi-domain] Cd Length: 95 Bit Score: 80.23 E-value: 8.01e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495850869 269 AVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQVELGDAIPEPLFETVAVVLRWVDELGRDH 348
Cdd:COG2257 11 AVALKYDGEKDNAPKVVAKGKGELAEKIIELAKEHGVPVHEDPELVELLSQLDLGDEIPPELYQAVAEILAFIYRLDGKA 90
|
....
gi 495850869 349 GDGD 352
Cdd:COG2257 91 PEGK 94
|
|
| flhB_rel |
TIGR00789 |
flhB C-terminus-related protein; This model describes a short protein (80-93 residues) ... |
265-341 |
2.61e-12 |
|
flhB C-terminus-related protein; This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set. [Unknown function, General]
Pssm-ID: 129871 [Multi-domain] Cd Length: 82 Bit Score: 61.69 E-value: 2.61e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 495850869 265 PTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQVELGDAIPEPLFETVAVVLRWV 341
Cdd:TIGR00789 1 KIKKAVALSYDTGKDKAPKVVASGVGEVAERIIEIAKKHGIPIVEDPDLVDVLLKLDLDDEIPEELYEVVAEIFAFL 77
|
|
| |
