|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
1-468 |
0e+00 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 526.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 1 MKKYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARPEREFAAPQVQ 80
Cdd:COG1167 11 GPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARLPAPAPAPRAA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 81 VMRDEAVdintyIFDMLQASRDasVMPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRHAIARRYAQ 160
Cdd:COG1167 91 AAVAAPA-----LRRLLEAAPG--VIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAIARYLAR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 161 QGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDvKEGIDLTALEQALQEYPV 240
Cdd:COG1167 164 RGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVD-EDGLDLDALEAALRRHRP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 241 KACWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRADSVLHCSSFSKCLVPGFRI 320
Cdd:COG1167 243 RAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIYIGSFSKTLAPGLRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 321 GW-VAAGKHARRIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQQAWQTLLRHLPAEVKIHHNDSGY 399
Cdd:COG1167 323 GYlVAPGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPGGL 402
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 496060336 400 FLWLELPEPLDAGVLSTHALAHHISIAPGKMFSTSGSWTRFFRFNTAWHWGDREEQAVKQLGKLIREMM 468
Cdd:COG1167 403 HLWLELPEGVDAEALAAAALARGILVAPGSAFSADGPPRNGLRLGFGAPSEEELEEALRRLAELLRELA 471
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
106-462 |
2.64e-74 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 237.24 E-value: 2.64e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 106 MPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSvienLPPGNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSL 184
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYY----PDPGLPELREAIAEWLGRRgGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 185 QAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDVKEGIDLT-ALEQALQEYPVKACWLmTNSQNPLGFTLSAEKKA 263
Cdd:cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDlELLEAAKTPKTKLLYL-NNPNNPTGAVLSEEELE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 264 RLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRADSVLHCSSFSKCL-VPGFRIGWVAAGKH--ARRIQRLQLMST 340
Cdd:cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFgLPGLRIGYLIAPPEelLERLKKLLPYTT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 341 LSTSSPMQLALVDYLSTRryDAHLRRLRRQLAERKQQAWQTLLRHLPaeVKIHHNDSGYFLWLELPEPLDAGVLSTHALA 420
Cdd:cd00609 236 SGPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGP--LVVVKPSGGFFLWLDLPEGDDEEFLERLLLE 311
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 496060336 421 HHISIAPGKMFSTSGSwtRFFRFNTAwhwGDREE--QAVKQLGK 462
Cdd:cd00609 312 AGVVVRPGSAFGEGGE--GFVRLSFA---TPEEEleEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
145-466 |
3.07e-52 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 180.71 E-value: 3.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARRYAQ-QGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGAlqALERLRLKALSIATD 221
Cdd:COG0436 67 AGIPELREAIAAYYKRrYGVDLDPDEILVTNGAKEALALALLALLNPGDEVLVPDPGYpsYRA--AVRLAGGKPVPVPLD 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 222 VKEG--IDLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPL-PAKA 297
Cdd:COG0436 145 EENGflPDPEALEAAITP---RTKAIVLNSpNNPTGAVYSREELEALAELAREHDLLVISDEIYEELVYDGAEHVsILSL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 298 WDRADSVLHCSSFSKCL-VPGFRIGWVAAGKH-ARRIQRLQLMSTLSTSSPMQLALVDYLSTrrYDAHLRRLRRQLAERK 375
Cdd:COG0436 222 PGLKDRTIVINSFSKSYaMTGWRIGYAVGPPElIAALLKLQSNLTSCAPTPAQYAAAAALEG--PQDYVEEMRAEYRRRR 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 376 QQAWQTLLRhlpAEVKIHHNDSGYFLWLELPEP-LDAGVLSTHALA-HHISIAPGKMFSTSGSwtRFFRFNTAwhwGDRE 453
Cdd:COG0436 300 DLLVEGLNE---IGLSVVKPEGAFYLFADVPELgLDSEEFAERLLEeAGVAVVPGSAFGPAGE--GYVRISYA---TSEE 371
|
330
....*....|....*
gi 496060336 454 --EQAVKQLGKLIRE 466
Cdd:COG0436 372 rlEEALERLARFLER 386
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
9-422 |
5.13e-37 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 140.95 E-value: 5.13e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 9 EQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARP---EREFAAPqvqvmrde 85
Cdd:PRK15481 12 DSIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPspvALEGGDP-------- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 86 avdiNTYIFDMlqasrdasvmpfASAFPDPRLFPlqQLNRSLAQVSKTATAMSVienlPPGNAELrHAIARRYAQQGMTi 165
Cdd:PRK15481 84 ----GTPLHDL------------AGGNPDPQRLP--DLSRYFARLSRTPRLYGD----APVSPEL-HAWAARWLRDDCP- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 166 SPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDVkEGIDLTALEQALQEyPVKACWL 245
Cdd:PRK15481 140 VAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA-EGMQPEKLERALAQ-GARAVIL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 246 MTNSQNPLGFTLSAEKKARLVALLEKY-HVILIEDDVYSELYFGR-EKPLPAKA--WdradSVLHcsSFSKCLVPGFRIG 321
Cdd:PRK15481 218 TPRAHNPTGCSLSARRAAALRNLLARYpQVLVIIDDHFALLSSSPyHSVIPQTTqrW----ALIR--SVSKALGPDLRLA 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 322 WVAAGKHARRIQRLQLMS-TLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQQAWQTLLRHlpaevKIHHNDS--G 398
Cdd:PRK15481 292 FVASDSATSARLRLRLNSgTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-----GIAIPSPgdG 366
|
410 420
....*....|....*....|....
gi 496060336 399 YFLWLELPEPLDAGVLsthALAHH 422
Cdd:PRK15481 367 LNLWLPLDTDSQATAL---TLAKS 387
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
114-448 |
1.02e-27 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 113.17 E-value: 1.02e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 114 DPRLFPLQqlnrSLAQVSKTATAMSVIENLPP--GNAELRHAIARRYAQQGMT--ISPDEIVITTGAMEALNLSLQAVTE 189
Cdd:pfam00155 10 EYLGDTLP----AVAKAEKDALAGGTRNLYGPtdGHPELREALAKFLGRSPVLklDREAAVVFGSGAGANIEALIFLLAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 190 PGDWVIVENPCFYGALQALERLRLKALSIATDVKEG--IDLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLV 266
Cdd:pfam00155 86 PGDAILVPAPTYASYIRIARLAGGEVVRYPLYDSNDfhLDFDALEAALKE---KPKVVLHTSpHNPTGTVATLEELEKLL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 267 ALLEKYHVILIEDDVYSELYFGREKPLPAKAW-DRADSVLHCSSFSKCL-VPGFRIGWVAAGKHARRIQRlQLMSTLSTS 344
Cdd:pfam00155 163 DLAKEHNILLLVDEAYAGFVFGSPDAVATRALlAEGPNLLVVGSFSKAFgLAGWRVGYILGNAAVISQLR-KLARPFYSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 345 SPMQLALVDYLSTR-RYDAHLRRLRRQLAERKQQawqtLLRHLPAEVKIH-HNDSGYFLWLELPePLDAGVLStHALA-- 420
Cdd:pfam00155 242 THLQAAAAAALSDPlLVASELEEMRQRIKERRDY----LRDGLQAAGLSVlPSQAGFFLLTGLD-PETAKELA-QVLLee 315
|
330 340
....*....|....*....|....*...
gi 496060336 421 HHISIAPGKMFSTSGswtrFFRFNTAWH 448
Cdd:pfam00155 316 VGVYVTPGSSPGVPG----WLRITVAGG 339
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
146-465 |
1.89e-26 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 110.03 E-value: 1.89e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDVKE 224
Cdd:PRK06108 62 GIPELREALARYVSRLhGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 225 G---IDLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPA--KAW 298
Cdd:PRK06108 142 GgwtLDLDRLLAAITP---RTRALFINSpNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSflDIA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 299 DRADSVLHCSSFSKC-LVPGFRIGW-VAAGKHARRIQRLQLMSTLSTSSPMQLALVDYLS-----TRRYDAHLRRLRRQL 371
Cdd:PRK06108 219 EPDDRIIFVNSFSKNwAMTGWRLGWlVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDegedfVAELVARLRRSRDHL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 372 AErkqqawqtLLRHLPAeVKIHHNDSGYFLWLELPepldaGVLSTHALAHHI------SIAPGKMFSTSGSwtRFFRfnt 445
Cdd:PRK06108 299 VD--------ALRALPG-VEVAKPDGAMYAFFRIP-----GVTDSLALAKRLvdeaglGLAPGTAFGPGGE--GFLR--- 359
|
330 340
....*....|....*....|....*
gi 496060336 446 awhW-----GDREEQAVKQLGKLIR 465
Cdd:PRK06108 360 ---WcfardPARLDEAVERLRRFLA 381
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
145-325 |
8.98e-26 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 108.36 E-value: 8.98e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARRYA-QQGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF---------YGAlqalerlRLK 214
Cdd:PRK06836 73 AGYPEVREAIAESLNrRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFveyrfyvdnHGG-------KLV 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 215 ALSIATDVKEgIDLTALEQALQEyPVKAcwLMTNS-QNPLGFTLSAEKKARLVALLEKY-----HVI-LIEDDVYSEL-Y 286
Cdd:PRK06836 146 VVPTDTDTFQ-PDLDALEAAITP-KTKA--VIINSpNNPTGVVYSEETLKALAALLEEKskeygRPIyLISDEPYREIvY 221
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 496060336 287 FGREKPLPAKAWDRAdsvLHCSSFSKCL-VPGFRIGWVAA 325
Cdd:PRK06836 222 DGAEVPYIFKYYDNS---IVVYSFSKSLsLPGERIGYIAV 258
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
145-468 |
8.92e-22 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 96.73 E-value: 8.92e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGalqalERLRL---KALSI 218
Cdd:PRK05764 68 AGIPELREAIAAKLKRDnGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWvsYP-----EMVKLaggVPVFV 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 219 ATDVKEG--IDLTALEQALQEyPVKacWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREK--PL 293
Cdd:PRK05764 143 PTGEENGfkLTVEQLEAAITP-KTK--ALILNSpSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEftSI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 294 PAKAWDRADSVLHCSSFSKCL-VPGFRIGWVAAGKH-ARRIQRLQLMSTLSTSSPMQLALVDYLSTRryDAHLRRLRRQL 371
Cdd:PRK05764 220 ASLSPELRDRTITVNGFSKAYaMTGWRLGYAAGPKElIKAMSKLQSHSTSNPTSIAQYAAVAALNGP--QDEVEEMRQAF 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 372 AERKQQAWQtLLRHLP--------------AEVKIHHNDSGY------FLWLElpeplDAGVlsthalahhiSIAPGKMF 431
Cdd:PRK05764 298 EERRDLMVD-GLNEIPglecpkpegafyvfPNVSKLLGKSITdslefaEALLE-----EAGV----------AVVPGIAF 361
|
330 340 350
....*....|....*....|....*....|....*....
gi 496060336 432 STSGswtrFFRFNTAwhwGDRE--EQAVKQLGKLIREMM 468
Cdd:PRK05764 362 GAPG----YVRLSYA---TSLEdlEEGLERIERFLESLK 393
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
146-323 |
3.74e-20 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 92.15 E-value: 3.74e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENP--CFYGALQALERLRLKALSIATDVK 223
Cdd:TIGR01264 74 GALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPgfPLYETLAESMGIEVKLYNLLPDKS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 224 EGIDLTALEQALQEYpvKACWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRADS 303
Cdd:TIGR01264 154 WEIDLKQLESLIDEK--TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVP 231
|
170 180
....*....|....*....|.
gi 496060336 304 VLHCSSFSK-CLVPGFRIGWV 323
Cdd:TIGR01264 232 ILSCGGLAKrWLVPGWRLGWI 252
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
145-324 |
4.63e-20 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 92.02 E-value: 4.63e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARRYAQQGMT-ISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLRLKALSIATD 221
Cdd:TIGR01265 73 VGALAAREAVAEYLSSDLPGkLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFplYDTRAAFSGLEVRLYDLLPE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 222 VKEGIDLTALEQALQEYPVkaCWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRA 301
Cdd:TIGR01265 153 KDWEIDLDGLESLADEKTV--AIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASFASI 230
|
170 180
....*....|....*....|....
gi 496060336 302 DSVLHCSSFSK-CLVPGFRIGWVA 324
Cdd:TIGR01265 231 VPVLSLGGISKrWVVPGWRLGWII 254
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
146-324 |
5.83e-20 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 91.45 E-value: 5.83e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPcFYGALQA-LERLRLKALSIATDVKE 224
Cdd:PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEP-FYANYNGfATSAGVKIVPVTTKIEE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 225 GIDLTALEqALQEY--PVKACWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPA----KAW 298
Cdd:PRK07568 146 GFHLPSKE-EIEKLitPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAlsleGLE 224
|
170 180 190
....*....|....*....|....*....|.
gi 496060336 299 DRA---DSVlhcsS--FSKClvpGFRIGWVA 324
Cdd:PRK07568 225 DRViiiDSV----SkrYSAC---GARIGCLI 248
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
132-382 |
1.88e-19 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 89.78 E-value: 1.88e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 132 KTATAMSVIENLP--PGNA---ELRHAIARRYAQQ-GMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPcFYGA 204
Cdd:PRK07683 47 KEAAKRAITENYTsyTHNAgllELRKAACNFVKDKyDLHYSPEsEIIVTIGASEAIDIAFRTILEPGTEVILPAP-IYPG 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 205 LQALERL-RLKALSIATDvKEGIDLTAleQALQEY--PVKACWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDV 281
Cdd:PRK07683 126 YEPIIRLcGAKPVFIDTR-STGFRLTA--EALENAitEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEI 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 282 YSELYFGREKPLPAKAWDRADSVLHCSSFSKC-LVPGFRIGWVAAGKH-ARRIQRLQLMSTLSTSSPMQLALVDYLSTRR 359
Cdd:PRK07683 203 YSELVYEQPHTSIAHFPEMREKTIVINGLSKShSMTGWRIGFLFAPSYlAKHILKVHQYNVTCASSISQYAALEALTAGK 282
|
250 260
....*....|....*....|...
gi 496060336 360 YDAHLrrLRRQLAERKQQAWQTL 382
Cdd:PRK07683 283 DDAKM--MRHQYKKRRDYVYNRL 303
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
119-443 |
2.74e-19 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 89.25 E-value: 2.74e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 119 PLQQLNRSLAQV--SKTATAMSVIEnlppGNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVI 195
Cdd:PRK07550 43 PPPELLRALAEAaaDPAAHLYGPVE----GLPELREAYAAHYSRLyGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVI 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 196 VENPCFYGALQALERLRLKALSIATDVKEGI--DLTALEQALQEyPVKACWLMTNSqNPLGFTLSAEKKARLVALLEKYH 273
Cdd:PRK07550 119 LPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLlpDPAAAEALITP-RTRAIALVTPN-NPTGVVYPPELLHELYDLARRHG 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 274 VILIEDDVYSELYFGREKP---LPAKAWDraDSVLHCSSFSK--CLvPGFRIGWVAAGKhARRIQRLQLMSTLSTSSPM- 347
Cdd:PRK07550 197 IALILDETYRDFDSGGGAPhdlFADPDWD--DTLVHLYSFSKsyAL-TGHRVGAVVASP-ARIAEIEKFMDTVAICAPRi 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 348 -QLA-------LVDYLSTRRYDAHLRR--LRRQLAERKQqaWQTLlrhlpaevkihhnDSG-YFLWLELPEPLDAGVLST 416
Cdd:PRK07550 273 gQIAvawglpnLADWRAGNRAEIARRRdaFRAVFARLPG--WELL-------------ASGaYFAYVRHPFPDRPSREVA 337
|
330 340
....*....|....*....|....*....
gi 496060336 417 HALAHHISIA--PGKMFSTSGswTRFFRF 443
Cdd:PRK07550 338 RRLAKEAGILclPGTMFGPGQ--EGYLRL 364
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
2-67 |
3.72e-19 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 80.95 E-value: 3.72e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 496060336 2 KKYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVA 67
Cdd:cd07377 1 PLYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFVA 66
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
125-338 |
3.79e-19 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 89.02 E-value: 3.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 125 RSLAQ--VSKTATAmsvienlppGNAELRHAIARRYAQQ-GMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPC 200
Cdd:PRK07682 44 RSLEQgyTSYTANA---------GLLELRQEIAKYLKKRfAVSYDPNdEIIVTVGASQALDVAMRAIINPGDEVLIVEPS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 201 F--YGALQALErlRLKALSIATDVKEGIDLTA--LEQALQEyPVKACWLMTNSqNPLGFTLSAEKKARLVALLEKYHVIL 276
Cdd:PRK07682 115 FvsYAPLVTLA--GGVPVPVATTLENEFKVQPaqIEAAITA-KTKAILLCSPN-NPTGAVLNKSELEEIAVIVEKHDLIV 190
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 496060336 277 IEDDVYSEL-YFGREKPLPAKAWDRADSVLhCSSFSKCL-VPGFRIGWVAAGKHAR----RIQRLQLM 338
Cdd:PRK07682 191 LSDEIYAELtYDEAYTSFASIKGMRERTIL-ISGFSKGFaMTGWRLGFIAAPVYFSeamlKIHQYSMM 257
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
4-89 |
1.25e-18 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 81.38 E-value: 1.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 4 YQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARPEREFAAPQVQVMR 83
Cdd:COG1725 12 YEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAEDARELLEERREEFLE 91
|
....*.
gi 496060336 84 DEAVDI 89
Cdd:COG1725 92 EALREL 97
|
|
| PRK07777 |
PRK07777 |
putative succinyldiaminopimelate transaminase DapC; |
145-443 |
2.28e-18 |
|
putative succinyldiaminopimelate transaminase DapC;
Pssm-ID: 236095 [Multi-domain] Cd Length: 387 Bit Score: 86.63 E-value: 2.28e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIA----RRYaqqGMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLRLKALS 217
Cdd:PRK07777 61 PGIPELRAAIAaqrrRRY---GLEYDPDtEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYdsYAAVIAMAGAHRVPVP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 218 I-ATDVKEGIDLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPA 295
Cdd:PRK07777 138 LvPDGRGFALDLDALRAAVTP---RTRALIVNSpHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 296 KA----WDRADSVlhcSSFSKCL-VPGFRIGWVAAGKH----ARRIQrlQLMsTLSTSSPMQLALVDYLSTRryDAHLRR 366
Cdd:PRK07777 215 ATlpgmRERTVTI---SSAAKTFnVTGWKIGWACGPAPliaaVRAAK--QYL-TYVGGAPFQPAVAHALDHE--DAWVAA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 367 LRRQLAERKQQAWQTLLRhlpAEVKIHHNDSGYFLWLElPEPL--DAGVLSTHALAHHISIA--PGKMF-STSGSWTRFF 441
Cdd:PRK07777 287 LRDSLQAKRDRLAAGLAE---AGFEVHDSAGTYFLCAD-PRPLgyDDGTEFCRALPERVGVAaiPMSVFyDPADAWNHLV 362
|
..
gi 496060336 442 RF 443
Cdd:PRK07777 363 RF 364
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
146-350 |
1.05e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 84.72 E-value: 1.05e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDVKE 224
Cdd:PRK08960 70 GLPALREAIAGFYAQRyGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 225 GIDLTA--LEQALQEYPVKAcwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPlpaKAWDRAD 302
Cdd:PRK08960 150 RYQLTPalVERHWNADTVGA--LVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA---SVLEVDD 224
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 496060336 303 SVLHCSSFSKCL-VPGFRIGW-VAAGKHARRIQRLQLMSTLSTSSPMQLA 350
Cdd:PRK08960 225 DAFVLNSFSKYFgMTGWRLGWlVAPPAAVPELEKLAQNLYISASTPAQHA 274
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
135-362 |
3.61e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 83.23 E-value: 3.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 135 TAMSvienlppGNAELRHAIARRYAQQ-GMTISP-DEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLR 212
Cdd:PRK07309 64 TGMA-------GLLELRQAAADFVKEKyNLDYAPeNEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVG 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 213 LKALSIATDVKEGIdLTA--LEQALQEYP--VKACWLMTNSqNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFg 288
Cdd:PRK07309 137 AEIVEIDTTENDFV-LTPemLEKAILEQGdkLKAVILNYPA-NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTY- 213
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 496060336 289 REKPLPAKAWDRADSVLHCSSFSKC-LVPGFRIGWVAAGKH--ARRIQRLQLMSTLSTSSpMQLALVDYLSTRRYDA 362
Cdd:PRK07309 214 TGEPHVSIAEYLPDQTILINGLSKShAMTGWRIGLIFAPAEftAQLIKSHQYLVTAATTM-AQFAAVEALTNGKDDA 289
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
146-393 |
4.91e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 82.89 E-value: 4.91e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQ-QGMTISP-DEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSI----- 218
Cdd:PRK06207 79 GDADIRELLAARLAAfTGAPVDAaDELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVqldyl 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 219 ATDVKEGIDLTALEQALQEyPVKAcWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSEL-YFGRE-KPLPAK 296
Cdd:PRK06207 159 SADKRAGLDLDQLEEAFKA-GVRV-FLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLlYDGTSyTHLRAL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 297 AWDrADSVLHCSSFSKC-LVPGFRIGwVAAGKHA--RRIQRLQLMSTLSTSSPMQLALVDYLS------TRRYDAH---- 363
Cdd:PRK06207 237 PID-PENVITIMGPSKTeSLSGYRLG-VAFGSPAiiDRMEKLQAIVSLRAAGYSQAVLRTWFSepdgwmKDRIARHqair 314
|
250 260 270
....*....|....*....|....*....|....*.
gi 496060336 364 ---LRRLR--RQLAERKQQAWQTLLRHLPA-EVKIH 393
Cdd:PRK06207 315 ddlLRVLRgvEGVFVRAPQAGSYLFPRLPRlAVSLH 350
|
|
| PRK09082 |
PRK09082 |
methionine aminotransferase; Validated |
145-367 |
1.03e-16 |
|
methionine aminotransferase; Validated
Pssm-ID: 181642 [Multi-domain] Cd Length: 386 Bit Score: 81.50 E-value: 1.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARRYAQ-QGMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALE-------RLRLKA 215
Cdd:PRK09082 67 TGVAALREAIAAKTARlYGRQYDADsEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIElaggravRVALQP 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 216 LSIAtdvkegIDLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLP 294
Cdd:PRK09082 147 PDFR------VDWQRFAAAISP---RTRLIILNTpHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHAS 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 295 AKAWD----RADSVlhcSSFSKCL-VPGFRIGWVAA----GKHARRIQrlQLMsTLSTSSPMQLALVDYLstRRYDAHLR 365
Cdd:PRK09082 218 VLRHPelreRAFVV---SSFGKTYhVTGWKVGYCVApaalSAEFRKVH--QYN-TFTVNTPAQLALADYL--RAEPEHYL 289
|
..
gi 496060336 366 RL 367
Cdd:PRK09082 290 EL 291
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
144-325 |
1.11e-16 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 81.69 E-value: 1.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 144 PPGNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDV 222
Cdd:PRK06348 65 SGGDVELIEEIIKYYSKNyDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 223 KEG--IDLTALEqALQEYPVKAcwLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFgREKPLPAKAWD 299
Cdd:PRK06348 145 EDGfqINVKKLE-ALITSKTKA--IILNSpNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSF-YEDFVPMATLA 220
|
170 180
....*....|....*....|....*...
gi 496060336 300 RA-DSVLHCSSFSKCL-VPGFRIGWVAA 325
Cdd:PRK06348 221 GMpERTITFGSFSKDFaMTGWRIGYVIA 248
|
|
| PLN00175 |
PLN00175 |
aminotransferase family protein; Provisional |
146-376 |
1.41e-16 |
|
aminotransferase family protein; Provisional
Pssm-ID: 215089 [Multi-domain] Cd Length: 413 Bit Score: 81.45 E-value: 1.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPcFYGALQAlerlrlkALSIATDVK 223
Cdd:PLN00175 92 GVPELNSAIAERFKKDtGLVVDPEkEVTVTSGCTEAIAATILGLINPGDEVILFAP-FYDSYEA-------TLSMAGAKI 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 224 EGIDLTALEQALQEYPVKACW-------LMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAK 296
Cdd:PLN00175 164 KTVTLRPPDFAVPEDELKAAFtsktraiLINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMAS 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 297 AWDRADSVLHCSSFSKCL-VPGFRIGWVAAGKH-ARRIQRLQLMSTLSTSSPMQLALVDYLstRRYDAHLRRLRRQLAER 374
Cdd:PLN00175 244 LPGMYERTVTMNSLGKTFsLTGWKIGWAIAPPHlTWGVRQAHSFLTFATATPMQWAAVAAL--RAPESYYEELKRDYSAK 321
|
..
gi 496060336 375 KQ 376
Cdd:PLN00175 322 KD 323
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
134-425 |
2.14e-16 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 80.18 E-value: 2.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 134 ATAMSVIENLP-PGNAELRHAIARRYAqqgmtISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGAlqALER 210
Cdd:COG0079 36 AAALDALNRYPdPDATALREALAEYYG-----VPPEQVLVGNGSDELIQLLARAFLGPGDEVLVPEPTFseYPI--AARA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 211 LRLKALSIATDVKEGIDLTALEQALQEyPVKACWLmTNSQNPLGFTLSAEKKARLVALLEKyHVILIEDDVYSElyFGRE 290
Cdd:COG0079 109 AGAEVVEVPLDEDFSLDLDALLAAITE-RTDLVFL-CNPNNPTGTLLPREELEALLEALPA-DGLVVVDEAYAE--FVPE 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 291 KPLPAKAWDRADSVLHCSSFSKCL-VPGFRIGWVAAgkHARRIQRLQLMSTL-STSSPMQLALVDYLstrRYDAHLRRLR 368
Cdd:COG0079 184 EDSALPLLARYPNLVVLRTFSKAYgLAGLRLGYAIA--SPELIAALRRVRGPwNVNSLAQAAALAAL---EDRAYLEETR 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 496060336 369 RQLAERKQQAWQTLlrhlpAEVKIHHNDS-GYFLWLELPEplDAGVLSTHALAHHISI 425
Cdd:COG0079 259 ARLRAERERLAAAL-----RALGLTVYPSqANFVLVRVPE--DAAELFEALLERGILV 309
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
146-356 |
2.67e-15 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 77.47 E-value: 2.67e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIATDVKE 224
Cdd:PRK06107 71 GTPALRKAIIAKLERRnGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQ 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 225 GIDLT--ALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKY-HVILIEDDVYSELYFGREkPLP---AKA 297
Cdd:PRK06107 151 GFKLTpeALEAAITP---RTRWLILNApSNPTGAVYSRAELRALADVLLRHpHVLVLTDDIYDHIRFDDE-PTPhllAAA 226
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 496060336 298 WDRADSVLHCSSFSKCL-VPGFRIGWVAAGKH-ARRIQRLQLMSTLSTSSPMQLALVDYLS 356
Cdd:PRK06107 227 PELRDRVLVTNGVSKTYaMTGWRIGYAAGPADlIAAINKLQSQSSSCPSSISQAAAAAALN 287
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
144-465 |
6.63e-15 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 76.25 E-value: 6.63e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 144 PPGNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPC------FYGALQALERLrlkal 216
Cdd:PRK07337 66 ALGLAPLREAIAAWYARRfGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSypcnrhFVAAAEGRPVL----- 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 217 sIATDVKEGIDLTALEqalqeypVKACW-------LMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFgR 289
Cdd:PRK07337 141 -VPSGPAERFQLTAAD-------VEAAWgertrgvLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSY-D 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 290 EKPLPAKAWDraDSVLHCSSFSKCL-VPGFRIGWVAA-----GKHARRIQRLQL-MSTLSTSSpmQLALVDYLSTRRYDA 362
Cdd:PRK07337 212 AAPVSALSLG--DDVITINSFSKYFnMTGWRLGWLVVpealvGTFEKLAQNLFIcASALAQHA--ALACFEPDTLAIYER 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 363 hlrrlRRQLAERKQQAWQTLLRHLPAEVKIhHNDSGYFLWLELPEPLDAGVLSTHALAH------HISIAPGKMFSTSGS 436
Cdd:PRK07337 288 -----RRAEFKRRRDFIVPALESLGFKVPV-MPDGAFYVYADCRGVAHPAAGDSAALTQamlhdaGVVLVPGRDFGPHAP 361
|
330 340
....*....|....*....|....*....
gi 496060336 437 wTRFFRFNTAWHWgDREEQAVKQLGKLIR 465
Cdd:PRK07337 362 -RDYIRLSYATSM-SRLEEAVARLGKLFG 388
|
|
| PRK08912 |
PRK08912 |
aminotransferase; |
144-373 |
9.95e-15 |
|
aminotransferase;
Pssm-ID: 181580 Cd Length: 387 Bit Score: 75.40 E-value: 9.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 144 PP--GNAELRHAIARRYAQ-QGMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPcFYGALQALER--------L 211
Cdd:PRK08912 60 PPmmGLPELRQAVAAHYARfQGLDLDPEtEVMVTSGATEALAAALLALVEPGDEVVLFQP-LYDAYLPLIRraggvprlV 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 212 RLKALSIAtdvkegIDLTALEQALQEyPVKACwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFG--R 289
Cdd:PRK08912 139 RLEPPHWR------LPRAALAAAFSP-RTKAV-LLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDgrR 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 290 EKPLPAKAWDRADSVLHCS---SFSkclVPGFRIGWVAAGKH-ARRIQRLQLMSTLSTSSPMQLALV-------DYLSTR 358
Cdd:PRK08912 211 HIPLMTLPGMRERTVKIGSagkIFS---LTGWKVGFVCAAPPlLRVLAKAHQFLTFTTPPNLQAAVAyglgkpdDYFEGM 287
|
250
....*....|....*
gi 496060336 359 RydAHLRRLRRQLAE 373
Cdd:PRK08912 288 R--ADLARSRDRLAA 300
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
146-322 |
1.06e-13 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 72.65 E-value: 1.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARrYAQQGM--TISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLRLKALSIATD 221
Cdd:PLN02656 74 GLPQARRAIAE-YLSRDLpyKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFpiYELCAAFRHLEVRYVDLLPE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 222 VKEGIDLTALEQALQEYPVkaCWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRA 301
Cdd:PLN02656 153 KGWEVDLDAVEALADQNTV--ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSI 230
|
170 180
....*....|....*....|..
gi 496060336 302 DSVLHCSSFSK-CLVPGFRIGW 322
Cdd:PLN02656 231 VPVLTLGSLSKrWIVPGWRLGW 252
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
3-73 |
1.49e-13 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 69.89 E-value: 1.49e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 496060336 3 KYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARPERE 73
Cdd:COG2188 6 LYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAEPKIEY 76
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
146-325 |
2.27e-13 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 71.72 E-value: 2.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENP--CFYGALQALERLRLKALSIATDV 222
Cdd:PLN00145 95 GLLPARRAIAEYLSRDlPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPgyPLYEARAVFSGLEVRHFDLLPER 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 223 KEGIDLTALEQALQEYPVKAcwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRAD 302
Cdd:PLN00145 175 GWEVDLEGVEALADENTVAM--VIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA 252
|
170 180
....*....|....*....|....
gi 496060336 303 SVLHCSSFSK-CLVPGFRIGWVAA 325
Cdd:PLN00145 253 PVLTLGSISKrWVVPGWRLGWIAT 276
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
146-407 |
2.66e-13 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 71.45 E-value: 2.66e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQ-QGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSIAtdVKE 224
Cdd:PRK08361 71 GIPELREAIAEYYKKfYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIP--LRE 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 225 GIDLTALEQALQEYPVKACWL--MTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRAD 302
Cdd:PRK08361 149 ENEFQPDPDELLELITKRTRMivINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDN 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 303 SVLhCSSFSKCL-VPGFRIGWVAAGKHA-RRIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQQAWQ 380
Cdd:PRK08361 229 TIL-ANSFSKTFaMTGWRLGFVIAPEQViKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLK 307
|
250 260
....*....|....*....|....*..
gi 496060336 381 TlLRHLPaEVKIHHNDSGYFLWLELPE 407
Cdd:PRK08361 308 R-LKEMP-HIKVFEPKGAFYVFANIDE 332
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
144-356 |
4.98e-13 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 70.59 E-value: 4.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 144 PP--GNAELRHAIA----RRYAQ---QGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLR 212
Cdd:PTZ00433 72 PPtvGSPEAREAVAtywrNSFVHkesLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFphYETVCKAYGIE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 213 LKALSIATDVKEGIDLTALeQALQEYPVKAcWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKP 292
Cdd:PTZ00433 152 MRFYNCRPEKDWEADLDEI-RRLVDDRTKA-LIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATF 229
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 496060336 293 LPAKAWDRADSVLHCSSFSKCL-VPGFRIGWV-------AAGKHARRIQRLQlMSTLSTSSPMQLALVDYLS 356
Cdd:PTZ00433 230 TSVADFDTTVPRVILGGTAKNLvVPGWRLGWLllvdphgNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALL 300
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
146-375 |
5.62e-13 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 70.22 E-value: 5.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARR-YAQQGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPC---------FYGAlqalerlrlKA 215
Cdd:PRK08363 71 GLPELREAIVKReKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSyppytglvkFYGG---------VP 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 216 LSIATDVKEGI--DLTALEQALQEYPVKACwlMTNSQNPLGfTLSAEKKAR-LVALLEKYHVILIEDDVYSELYFGREKP 292
Cdd:PRK08363 142 VEYRTIEEEGWqpDIDDIRKKITEKTKAIA--VINPNNPTG-ALYEKKTLKeILDIAGEHDLPVISDEIYDLMTYEGKHV 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 293 LPAKAwDRADSVLHCSSFSKC-LVPGFRIGWVAAGKHARRIQRLQ------LMSTLSTSSPMQLALVDYLstRRYDAHLR 365
Cdd:PRK08363 219 SPGSL-TKDVPVIVMNGLSKVyFATGWRLGYIYFVDPEGKLAEVReaidklARIRLCPNTPAQFAAIAGL--TGPMDYLE 295
|
250
....*....|
gi 496060336 366 RLRRQLAERK 375
Cdd:PRK08363 296 EYMKKLKERR 305
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
167-412 |
1.26e-12 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 69.53 E-value: 1.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 167 PDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALE-RLRLKALSIATDVKEGIDLT--ALEQALQE-----Y 238
Cdd:PLN02607 120 PDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRwRTGVKIVPIHCDSSNNFQVTpqALEAAYQEaeaanI 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 239 PVKACwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGRE------KPLPAKAW-DRADSVLHCSSFS 311
Cdd:PLN02607 200 RVRGV-LITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASefvsvaEIVEARGYkGVAERVHIVYSLS 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 312 KCL-VPGFRIGWV-----AAGKHARRIQRLQLMstlstSSPMQLALVDYLSTRRY-DAHLRRLRRQLAERKQQAWQTLLR 384
Cdd:PLN02607 279 KDLgLPGFRVGTIysyndKVVTTARRMSSFTLV-----SSQTQHLLASMLSDEEFtENYIRTNRERLRKRYEMIVQGLRR 353
|
250 260
....*....|....*....|....*...
gi 496060336 385 hlpAEVKIHHNDSGYFLWLELPEPLDAG 412
Cdd:PLN02607 354 ---AGIECLKGNAGLFCWMNLSPLLETP 378
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
7-66 |
1.51e-12 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 62.21 E-value: 1.51e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 7 LAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYV 66
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
2-99 |
2.75e-12 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 66.11 E-value: 2.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 2 KKYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARPEREFAAPQVQV 81
Cdd:COG2186 7 SLAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREPSPWALLDPLALL 86
|
90
....*....|....*...
gi 496060336 82 MRDEAVDintyIFDMLQA 99
Cdd:COG2186 87 LALDDAS----LRDLLEA 100
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
145-328 |
4.97e-12 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 67.40 E-value: 4.97e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGnaeLRHAIARRYAQQ-GMTISPD-EIVITTGAMEAL-NLSlQAVTEPGDWVIVENPCF----YGALQALERLRlkalS 217
Cdd:PRK09148 71 PG---LRRAQAAYYARRfGVKLNPDtQVVATLGSKEGFaNMA-QAITAPGDVILCPNPSYpihaFGFIMAGGVIR----S 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 218 IATDVKEGIdLTALEQALQEYPVKACWLMTN-SQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKP---- 292
Cdd:PRK09148 143 VPAEPDEEF-FPALERAVRHSIPKPIALIVNyPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPpsvl 221
|
170 180 190
....*....|....*....|....*....|....*....
gi 496060336 293 -LP-AKawdraDSVLHCSSFSKCL-VPGFRIGWVAAGKH 328
Cdd:PRK09148 222 qVPgAK-----DVTVEFTSMSKTFsMAGWRMGFAVGNER 255
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
3-66 |
6.50e-12 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 60.71 E-value: 6.50e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 496060336 3 KYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYV 66
Cdd:pfam00392 1 LYEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| PRK07324 |
PRK07324 |
transaminase; Validated |
146-334 |
1.02e-11 |
|
transaminase; Validated
Pssm-ID: 235989 Cd Length: 373 Bit Score: 66.11 E-value: 1.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQgmtiSPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF---------YGALQALERLR---- 212
Cdd:PRK07324 63 GSPEFKEAVASLYQNV----KPENILQTNGATGANFLVLYALVEPGDHVISVYPTYqqlydipesLGAEVDYWQLKeeng 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 213 -------LKALsiatdVKEGIDLTALeqalqeypvkacwlmTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYseL 285
Cdd:PRK07324 139 wlpdldeLRRL-----VRPNTKLICI---------------NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY--R 196
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 496060336 286 YFGREKPLPAKA--WDRADSVlhcSSFSKCL-VPGFRIGWVAAGK---HARRIQR 334
Cdd:PRK07324 197 PLDEDGSTPSIAdlYEKGIST---NSMSKTYsLPGIRVGWIAANEeviDILRKYR 248
|
|
| his_ut_repres |
TIGR02018 |
histidine utilization repressor, proteobacterial; This model represents a proteobacterial ... |
3-112 |
1.72e-11 |
|
histidine utilization repressor, proteobacterial; This model represents a proteobacterial histidine utilization repressor. It is usually found clustered with the enzymes HutUHIG so that it can regulate its own expression as well. A number of species have several paralogs and may fine-tune the regulation according to levels of degradation intermediates such as urocanate. This family belongs to the larger GntR family of transcriptional regulators. [Energy metabolism, Amino acids and amines, Regulatory functions, DNA interactions]
Pssm-ID: 188194 [Multi-domain] Cd Length: 230 Bit Score: 63.88 E-value: 1.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 3 KYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVaARPEREFAAPQVQVM 82
Cdd:TIGR02018 2 LYQRIKQDILERIRSGEWPPGHRIPSEHELVAQYGCSRMTVNRALRELTDAGLLERRQGVGTFV-AEPKAQSALLEIRNI 80
|
90 100 110
....*....|....*....|....*....|.
gi 496060336 83 RDEAVDI-NTYIFDMLQASRDASVMPFASAF 112
Cdd:TIGR02018 81 ADEIVARgHRYRYELLELETRRATAEDAAAL 111
|
|
| PRK12414 |
PRK12414 |
putative aminotransferase; Provisional |
83-356 |
7.14e-11 |
|
putative aminotransferase; Provisional
Pssm-ID: 183514 Cd Length: 384 Bit Score: 63.65 E-value: 7.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 83 RDEAVDINTYIFDM---LQASRDA-SVMPFASAF-PDPRLfpLQQLNRSLAQVSKTATAMSvienlppGNAELRHAIARR 157
Cdd:PRK12414 8 RSKLPDVGTTIFTVigqLAAQHDAlNLSQGAPNFaPDPAL--VEGVARAMRDGHNQYAPMA-------GIAALREALAEK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 158 YAQ-QGMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALqalerLRLKAlsiATDVkeGIDLTALEQ 233
Cdd:PRK12414 79 TERlYGARYDPAsEVTVIASASEGLYAAISALVHPGDEVIYFEPSFdsYAPI-----VRLQG---ATPV--AIKLSPEDF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 234 ALQEYPVKAC------WLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYF-GREKPLPAKAWDRADSVL 305
Cdd:PRK12414 149 RVNWDEVAAAitprtrMIIVNTpHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFdGARHHSMARHRELAERSV 228
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 496060336 306 HCSSFSKCL-VPGFRIGW-VAAGKHARRIQRLQLMSTLSTSSPMQLALVDYLS 356
Cdd:PRK12414 229 IVSSFGKSYhVTGWRVGYcLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALA 281
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
165-323 |
1.85e-10 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 62.72 E-value: 1.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 165 ISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLRLKALSIATDVKEGIDLTALEQALQEYPVKA 242
Cdd:PLN00143 95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFpdVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 243 cwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRADSVLHCSSFSK-CLVPGFRIG 321
Cdd:PLN00143 175 --VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKrWMIPGWGLG 252
|
..
gi 496060336 322 WV 323
Cdd:PLN00143 253 WL 254
|
|
| PLN02376 |
PLN02376 |
1-aminocyclopropane-1-carboxylate synthase |
146-439 |
1.57e-09 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 178004 [Multi-domain] Cd Length: 496 Bit Score: 60.10 E-value: 1.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRY--AQQG-MTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPcFYGALQALERLR--LKALSIAT 220
Cdd:PLN02376 95 GLKKFRQAIAHFMgkARGGkVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSP-YYAAFDRDLRWRtgVEIIPVPC 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 221 DVKEGIDLT------ALEQALQEYPVKACWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYF-GREKPL 293
Cdd:PLN02376 174 SSSDNFKLTvdaadwAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFaGGDFVS 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 294 PAKAWDRAD------SVLH-CSSFSKCL-VPGFRIGWVAAGKH-----ARRIQRLQLMstlstSSPMQLALVDYLSTRRY 360
Cdd:PLN02376 254 VAEVVNDVDisevnvDLIHiVYSLSKDMgLPGFRVGIVYSFNDsvvscARKMSSFGLV-----SSQTQLMLASMLSDDQF 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 361 -DAHLRRLRRQLAERkQQAWQTLLRHlpAEVKIHHNDSGYFLWLELPEPL-DAGVLSTHALAHHI-------SIAPGKMF 431
Cdd:PLN02376 329 vDNFLMESSRRLGIR-HKVFTTGIKK--ADIACLTSNAGLFAWMDLRHLLrDRNSFESEIELWHIiidkvklNVSPGSSF 405
|
....*....
gi 496060336 432 S-TSGSWTR 439
Cdd:PLN02376 406 RcTEPGWFR 414
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
165-324 |
1.60e-09 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 59.74 E-value: 1.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 165 ISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLRLKALSIATDVKEGIDLTALEQALQEYPVKA 242
Cdd:PLN02187 129 LTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFphYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAM 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 243 cwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRADSVLHCSSFSK-CLVPGFRIG 321
Cdd:PLN02187 209 --VVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKgWVVPGWKIG 286
|
...
gi 496060336 322 WVA 324
Cdd:PLN02187 287 WIA 289
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
144-369 |
2.06e-09 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 59.00 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 144 PPGNAELRHAIArryaqQGMTISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENP-----CFYGALQALERLRLKALSI 218
Cdd:PRK06225 65 PEGFPELRELIL-----KDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPgyliiDNFASRFGAEVIEVPIYSE 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 219 ATD-------VKEGIDL-TALeqalqeypvkacWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSElyFGRE 290
Cdd:PRK06225 140 ECNykltpelVKENMDEnTRL------------IYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRD--FARE 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 291 KPLPAKAwdRADSVLHCSSFSK-CLVPGFRIGWVAAGKHARRIQRLQLMSTLSTSSPMQLALVDYLSTRryDAHLRRLRR 369
Cdd:PRK06225 206 HTLAAEY--APEHTVTSYSFSKiFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEAAIAGLKVK--DEWIDRIRR 281
|
|
| PRK08068 |
PRK08068 |
transaminase; Reviewed |
146-435 |
3.11e-09 |
|
transaminase; Reviewed
Pssm-ID: 181219 Cd Length: 389 Bit Score: 58.78 E-value: 3.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPCF--YGALQALERLRLKALSIATD 221
Cdd:PRK08068 71 GYPFLKEAAADFYKREyGVTLDPEtEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYpdYLSGVALARAQFETMPLIAE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 222 VKEGIDLTALEQALQEypvKACWLMTN-SQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKAWDR 300
Cdd:PRK08068 151 NNFLPDYTKIPEEVAE---KAKLMYLNyPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 301 ADSV-LHCSSFSKCL-VPGFRIGWvAAGkHARRIQRLQLMST---LSTSSPMQLALVDYLSTRryDAHLRRLrRQLAERK 375
Cdd:PRK08068 228 AKDVgIELYTLSKTFnMAGWRVAF-AVG-NESVIEAINLLQDhlfVSLFGAIQDAAIEALLSD--QSCVAEL-VARYESR 302
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 496060336 376 QQAWQTLLRHLPAEVKIhhnDSG-YFLWLELPEPLD----AGVLSTHAlahHISIAPGKMFSTSG 435
Cdd:PRK08068 303 RNAFISACREIGWEVDA---PKGsFFAWMPVPKGYTseqfADLLLEKA---HVAVAPGNGFGEHG 361
|
|
| PRK05166 |
PRK05166 |
histidinol-phosphate transaminase; |
145-378 |
5.81e-09 |
|
histidinol-phosphate transaminase;
Pssm-ID: 179950 Cd Length: 371 Bit Score: 57.84 E-value: 5.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARRYAqqgmtISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCF-----YGALQAlerLRLKALSIA 219
Cdd:PRK05166 71 PQGRALREAIAARTG-----VPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFplhedYPTMMG---ARVERVTVT 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 220 TDVkeGIDLTALEQALQEYPVKAcwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIeDDVYSELYFGREKPLPA---K 296
Cdd:PRK05166 143 PDL--GFDLDALCAAVARAPRML--MFSNPSNPVGSWLTADQLARVLDATPPETLIVV-DEAYAEYAAGDDYPSALtllK 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 297 AWDRADSVLHcsSFSKCL-VPGFRIGWVAAGKHARRiqrlQLMSTLSTssPM---QLALVDYLSTRRYDAHLRR-LRRQL 371
Cdd:PRK05166 218 ARGLPWIVLR--TFSKAYgLAGLRVGYGLVSDPELV----GLLDRVRT--PFnvnGAAQAAALAALDDEEHLAKgVALAL 289
|
....*..
gi 496060336 372 AERKQQA 378
Cdd:PRK05166 290 AERERLK 296
|
|
| avtA |
PRK09440 |
valine--pyruvate transaminase; Provisional |
251-431 |
8.96e-09 |
|
valine--pyruvate transaminase; Provisional
Pssm-ID: 236517 Cd Length: 416 Bit Score: 57.17 E-value: 8.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 251 NPLGFTLSAEKKARLVALLEKYHVILIEDDVYS----ELYFGREKPLpakaWDraDSVLHCSSFSKCLVPGFRIGWVAAG 326
Cdd:PRK09440 190 NPTGNVLTDEELEKLDALARQHNIPLLIDNAYGppfpGIIFSEATPL----WN--PNIILCMSLSKLGLPGVRCGIVIAD 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 327 khARRIQRLQLMST---LSTSSPMQLALVDYLStrryDAHLRRLRRQL-----AERKQQAWQTLLRHLPAE-VKIHHNDS 397
Cdd:PRK09440 264 --EEIIEALSNMNGiisLAPGRLGPAIAAEMIE----SGDLLRLSETVirpfyRQKVQLAIALLRRYLPDEpCLIHKPEG 337
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 496060336 398 GYFLWLELPE-PldagvLSTHALAHHIS-----IAPGKMF 431
Cdd:PRK09440 338 AIFLWLWFKDlP-----ITTEELYQRLKargvlVVPGHYF 372
|
|
| PRK08636 |
PRK08636 |
LL-diaminopimelate aminotransferase; |
150-435 |
1.63e-08 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 236316 Cd Length: 403 Bit Score: 56.25 E-value: 1.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 150 LRHAIARRYAQQ-GMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQA-------LERLRLKaLSIAT 220
Cdd:PRK08636 76 LRLAICNWYKRKyNVDLDPEtEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAfilaggnVHKMPLE-YNEDF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 221 DVKEGIDLTALEQALQEYPVKACWLMTN-SQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYF-GREKPLPAKAW 298
Cdd:PRK08636 155 ELDEDQFFENLEKALRESSPKPKYVVVNfPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFdGYKTPSILEVE 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 299 DRADSVLHCSSFSKCL-VPGFRIGWVAAGKhaRRIQRLQLMST---LSTSSPMQLAlvdylSTRRYDAHlRRLRRQLAER 374
Cdd:PRK08636 235 GAKDVAVESYTLSKSYnMAGWRVGFVVGNK--KLVGALKKIKSwldYGMFTPIQVA-----ATIALDGD-QSCVEEIRET 306
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 496060336 375 KQQAWQTLLRHLP-AEVKIHHNDSGYFLWLELPEPL-DAGVL--STHALAH-HISIAPGKMFSTSG 435
Cdd:PRK08636 307 YRKRRDVLIESFAnAGWELQKPRASMFVWAKIPEPArHLGSLefSKQLLTEaKVAVSPGIGFGEYG 372
|
|
| PRK14999 |
PRK14999 |
histidine utilization repressor; Provisional |
4-87 |
1.95e-08 |
|
histidine utilization repressor; Provisional
Pssm-ID: 184961 [Multi-domain] Cd Length: 241 Bit Score: 54.94 E-value: 1.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 4 YQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVaARPEREFAAPQVQVMR 83
Cdd:PRK14999 14 YETVKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWLVRLQGVGTFV-AEPKGQSALFEVRSIA 92
|
....
gi 496060336 84 DEAV 87
Cdd:PRK14999 93 EEIA 96
|
|
| PLN02450 |
PLN02450 |
1-aminocyclopropane-1-carboxylate synthase |
164-405 |
2.61e-08 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 178069 [Multi-domain] Cd Length: 468 Bit Score: 55.91 E-value: 2.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 164 TISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALE-RLRLKALSIATDVKEGIDLT--ALEQALQE--- 237
Cdd:PLN02450 108 TFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKwRTGVEIVPIHCSSSNGFQITesALEEAYQQaqk 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 238 --YPVKACwLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGRE------------KPLPAKAWDRADS 303
Cdd:PLN02450 188 lnLKVKGV-LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPgfvsvmevlkdrKLENTDVSNRVHI 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 304 VLhcsSFSKCL-VPGFRIGWV---------AAGKharriqrlqlMSTLS-TSSPMQLALVDYLSTRRYDAH-LRRLRRQL 371
Cdd:PLN02450 267 VY---SLSKDLgLPGFRVGAIysndemvvsAATK----------MSSFGlVSSQTQYLLSALLSDKKFTKNyLEENQKRL 333
|
250 260 270
....*....|....*....|....*....|....*
gi 496060336 372 AERKQQawqtLLRHL-PAEVKIHHNDSGYFLWLEL 405
Cdd:PLN02450 334 KQRQKK----LVSGLeAAGIKCLKSNAGLFCWVDM 364
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
113-435 |
1.10e-07 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 53.66 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 113 PD--PRLFPLQQLNRSLAQVSKTATAMSvienlppGNAELRHAIARRY-AQQGMTISPD-EIVITTGAMEALNLSLQAVT 188
Cdd:PRK07681 42 PDmpPADFVREEMVHTANQKESYGYTLS-------GIQEFHEAVTEYYnNTHNVILNADkEVLLLMGSQDGLVHLPMVYA 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 189 EPGDWVIVENPCF--YGALQALERLRLKALSIAtdvKEGIDLTALEQALQEYPVKACWLMTN-SQNPLGFTLSAEKKARL 265
Cdd:PRK07681 115 NPGDIILVPDPGYtaYETGIQMAGATSYYMPLK---KENDFLPDLELIPEEIADKAKMMILNfPGNPVPAMAHEDFFKEV 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 266 VALLEKYHVILIEDDVYSELYFGREKPLPAKAWDRADSV-LHCSSFSKCL-VPGFRIGWVAAgkHARRIQRL-QLMSTLS 342
Cdd:PRK07681 192 IAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVgVEINSLSKSYsLAGSRIGYMIG--NEEIVRALtQFKSNTD 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 343 TSS--PMQLALVDYLstrRYDAHLRRLRRQLAERKQQAWQTLLRHLPAEVKihHNDSGYFLWLELPEPLDAGVLSTHALA 420
Cdd:PRK07681 270 YGVflPIQKAACAAL---RNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD--KPAGSMFVWAEIPKGWTSLSFAYALMD 344
|
330
....*....|....*.
gi 496060336 421 H-HISIAPGKMFSTSG 435
Cdd:PRK07681 345 RaNVVVTPGHAFGPHG 360
|
|
| PRK09147 |
PRK09147 |
succinyldiaminopimelate transaminase; Provisional |
118-406 |
5.10e-07 |
|
succinyldiaminopimelate transaminase; Provisional
Pssm-ID: 236393 Cd Length: 396 Bit Score: 51.80 E-value: 5.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 118 FPLQQLNRSLAQVSK-TATAmsvienlppGNAELRHAIA----RRYAQQgmTISPD-EIVITTGAMEALNLSLQAV---T 188
Cdd:PRK09147 46 FIKDALAANLDGLASyPTTA---------GLPALREAIAawleRRYGLP--ALDPAtQVLPVNGSREALFAFAQTVidrD 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 189 EPGDWVIVENPcFY----GA--LQALERLRLKALSiATDVkeGIDLTALEQALqeypvkacWLMT------NSQNPLGFT 256
Cdd:PRK09147 115 GPGPLVVCPNP-FYqiyeGAalLAGAEPYFLNCDP-ANNF--APDFDAVPAEV--------WARTqllfvcSPGNPTGAV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 257 LSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLP-----AKAWDRAD----SVLHcsSFSK-CLVPGFRIGWVAAg 326
Cdd:PRK09147 183 LPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLglleaAAELGRDDfkrlVVFH--SLSKrSNVPGLRSGFVAG- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 327 kHARRIQRLQLMSTL---STSSPMQLAlvdylSTRRYD--AHLRRLRRQLAErKQQAWQTLLrhlpAEV-KIHHNDSGYF 400
Cdd:PRK09147 260 -DAALLKKFLLYRTYhgcAMPPAVQAA-----SIAAWNdeAHVRENRALYRE-KFDAVTPIL----APVlDVQLPDAGFY 328
|
....*.
gi 496060336 401 LWLELP 406
Cdd:PRK09147 329 LWAKVP 334
|
|
| PRK05957 |
PRK05957 |
pyridoxal phosphate-dependent aminotransferase; |
140-336 |
1.31e-06 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235654 Cd Length: 389 Bit Score: 50.46 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 140 IENLPPgnaeLRHAIARRYAQQ-GMTISPDE-IVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALS 217
Cdd:PRK05957 64 VQGIPP----LLEAITQKLQQDnGIELNNEQaIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPIL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 218 IATDVKEGIDLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPL-PA 295
Cdd:PRK05957 140 VPTDDNYQLQPEAIEQAITP---KTRAIVTISpNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFsPG 216
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 496060336 296 KAWDRADSVLHCSSFSKCL-VPGFRIGWVAAGKH-ARRIQRLQ 336
Cdd:PRK05957 217 SIPGSGNHTISLYSLSKAYgFASWRIGYMVIPIHlLEAIKKIQ 259
|
|
| PRK09276 |
PRK09276 |
LL-diaminopimelate aminotransferase; Provisional |
146-463 |
1.92e-06 |
|
LL-diaminopimelate aminotransferase; Provisional
Pssm-ID: 181749 Cd Length: 385 Bit Score: 49.91 E-value: 1.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIARRYAQQ-GMTISPD-EIVITTGAMEAL-NLSLqAVTEPGDWVIVENPCF--YGalqalerlrlkalsIAT 220
Cdd:PRK09276 70 GMLEFRKAVADWYKRRfGVELDPEtEVISLIGSKEGIaHIPL-AFVNPGDVVLVPDPGYpvYK--------------IGT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 221 DVKEGI--------------DLTALEQALQEypvKACWLMTNS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSEL 285
Cdd:PRK09276 135 IFAGGEpyfmplkeengflpDLDAIPEDVAK---KAKLMFINYpNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEI 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 286 YFGREKPLPAKAWDRADSV---LHcsSFSKCL-VPGFRIGWvAAGKhARRIQRL-QLMSTLSTSSP--MQLALVDYLSTR 358
Cdd:PRK09276 212 AYDGYKPPSFLEVPGAKDVgieFH--SLSKTYnMTGWRIGF-AVGN-ADLIAGLgKVKSNVDSGVFqaIQEAGIAALNGP 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 359 ryDAHLRRLRRQLAERKQQAWQTlLRHLPAEVKIhhNDSGYFLWLELPEPLDAGVLSTHALAHH-ISIAPGKMFSTSGSw 437
Cdd:PRK09276 288 --QEVVEELRKIYQERRDILVEG-LRKLGLEVEP--PKATFYVWAPVPKGYTSAEFATLLLDKAgVVVTPGNGFGEYGE- 361
|
330 340 350
....*....|....*....|....*....|
gi 496060336 438 tRFFRF----NTawhwgDREEQAVKQLGKL 463
Cdd:PRK09276 362 -GYFRIaltvPD-----ERIEEAVERIKKL 385
|
|
| AAT_I |
cd01494 |
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ... |
147-317 |
2.68e-06 |
|
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).
Pssm-ID: 99742 [Multi-domain] Cd Length: 170 Bit Score: 47.38 E-value: 2.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 147 NAELRHAiARRYAQQGMtispDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFYGALQ-ALERLRLKALSIATDVKE- 224
Cdd:cd01494 2 LEELEEK-LARLLQPGN----DKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWvAAELAGAKPVPVPVDDAGy 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 225 -GIDLTALEQALQEYPVKACWLMTNSQNPLGFTLSAEkkarLVALLEKYHVILIEDDVYSELYFGREKPLPakAWDRADS 303
Cdd:cd01494 77 gGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKE----IRKIAKEYGILLLVDAASAGGASPAPGVLI--PEGGADV 150
|
170
....*....|....*
gi 496060336 304 VLHcsSFSK-CLVPG 317
Cdd:cd01494 151 VTF--SLHKnLGGEG 163
|
|
| PRK10421 |
PRK10421 |
DNA-binding transcriptional repressor LldR; Provisional |
6-99 |
2.82e-06 |
|
DNA-binding transcriptional repressor LldR; Provisional
Pssm-ID: 236690 [Multi-domain] Cd Length: 253 Bit Score: 48.61 E-value: 2.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 6 RLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARP----EREFAAPQVQV 81
Cdd:PRK10421 6 EVADRVRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWRHetwsEQNIVQPLKTL 85
|
90
....*....|....*...
gi 496060336 82 MRDEAvdinTYIFDMLQA 99
Cdd:PRK10421 86 MADDP----DYSFDILEA 99
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
4-110 |
6.59e-06 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 47.53 E-value: 6.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 4 YQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARPEREFAAPqvqvmr 83
Cdd:PRK11523 10 YQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAA------ 83
|
90 100 110
....*....|....*....|....*....|
gi 496060336 84 DEAVDINTY-IFDMLQASR--DASVMPFAS 110
Cdd:PRK11523 84 DNNMEFANYgPFELLQARQliESNIAEFAA 113
|
|
| PRK05942 |
PRK05942 |
aspartate aminotransferase; Provisional |
144-340 |
1.52e-05 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 180317 Cd Length: 394 Bit Score: 47.02 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 144 PP--GNAELRHAIARRYAQQ-GMTISPD-EIVITTGAMEALNLSLQAVTEPGDWVIVENPC----FYGALQALERLRLKA 215
Cdd:PRK05942 70 PPfeGTASFRQAITDWYHRRyGVELDPDsEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAypahFRGPLIAGAQIYPII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 216 LSIATDVKegIDLTALEQALQEypvKACWLMTN-SQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKP-- 292
Cdd:PRK05942 150 LKPENDWL--IDLSSIPEEVAQ---QAKILYFNyPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPts 224
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 496060336 293 ---LP-AKawdraDSVLHCSSFSKCL-VPGFRIGWVAAGKHArrIQRLQLMST 340
Cdd:PRK05942 225 lleIPgAK-----DIGVEFHTLSKTYnMAGWRVGFVVGNRHI--IQGLRTLKT 270
|
|
| PRK05839 |
PRK05839 |
succinyldiaminopimelate transaminase; |
146-324 |
1.89e-05 |
|
succinyldiaminopimelate transaminase;
Pssm-ID: 180281 Cd Length: 374 Bit Score: 46.60 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHA----IARRYaqqGMTISPDEIVITTGAMEAL-NLSLQAVTEPGDWVIV-ENPcFY----GALQALerlrlKA 215
Cdd:PRK05839 61 GEESLREAqrgfFKRRF---KIELKENELIPTFGTREVLfNFPQFVLFDKQNPTIAyPNP-FYqiyeGAAIAS-----RA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 216 LSIATDVKEGIDLTAleqALQEYPVKACWLMT-NS-QNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKP- 292
Cdd:PRK05839 132 KVLLMPLTKENDFTP---SLNEKELQEVDLVIlNSpNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPs 208
|
170 180 190
....*....|....*....|....*....|....*..
gi 496060336 293 -LPA--KAWDRA-DSVLHCSSFSKCL-VPGFRIGWVA 324
Cdd:PRK05839 209 lLEAsiLVGNESfKNVLVINSISKRSsAPGLRSGFIA 245
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
3-66 |
2.32e-05 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 45.59 E-value: 2.32e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 496060336 3 KYQRLAEQIRDQIASGVWQPGDRLP---SLREQVvssGMSFMTVGHAYQLLESQGRIIARPQSGYYV 66
Cdd:PRK09764 6 LYRQIADRIREQIARGELKPGDALPtesALQTEF---GVSRVTVRQALRQLVEQQILESIQGSGTYV 69
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
5-67 |
2.97e-05 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 45.30 E-value: 2.97e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 496060336 5 QRLAEQIRDQIASGVWQPGDRlpsLREQVVSS--GMSFMTVGHAYQLLESQGRIIARPQSGYYVA 67
Cdd:COG1802 14 EQVYEALREAILSGELPPGER---LSEAELAErlGVSRTPVREALRRLEAEGLVEIRPNRGARVA 75
|
|
| PRK10225 |
PRK10225 |
Uxu operon transcriptional regulator; |
2-110 |
6.28e-05 |
|
Uxu operon transcriptional regulator;
Pssm-ID: 182318 [Multi-domain] Cd Length: 257 Bit Score: 44.63 E-value: 6.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 2 KKYQRLAEQIRDQIASGVWQPGDRLPSLREQVVSSGMSFMTVGHAYQLLESQGRIIARPQSGYYVAARPER-EFAAPQVQ 80
Cdd:PRK10225 9 RPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGShNTDSPDAN 88
|
90 100 110
....*....|....*....|....*....|..
gi 496060336 81 VMRDEAVdintyiFDMLQASR--DASVMPFAS 110
Cdd:PRK10225 89 VCNDAGP------FELLQARQllESNIAEFAA 114
|
|
| PRK06855 |
PRK06855 |
pyridoxal phosphate-dependent aminotransferase; |
227-382 |
6.77e-05 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180734 Cd Length: 433 Bit Score: 44.94 E-value: 6.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 227 DLTALEQALQEYPVKACWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPLPAKawDRADSV-- 304
Cdd:PRK06855 158 DLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLS--EVIGDVpg 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 305 LHCSSFSKCLV-PGFRIGWVAA---------GKHARRIQRLQLMSTLSTSSPmQLALVDYLSTRRYDAHLRRLRRQLAER 374
Cdd:PRK06855 236 IALKGISKELPwPGSRCGWIEVynadkdevfKKYINSILNAKMIEVCSTTLP-QMAIPRIMSHPEYKNYLKERNKRYEKR 314
|
....*...
gi 496060336 375 KQQAWQTL 382
Cdd:PRK06855 315 SNIAYEKL 322
|
|
| PLN02231 |
PLN02231 |
alanine transaminase |
150-291 |
3.06e-04 |
|
alanine transaminase
Pssm-ID: 177876 [Multi-domain] Cd Length: 534 Bit Score: 43.00 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 150 LRHAIARRY-AQQGMTISPDEIVITTGAMEALNLSLQA-VTEPGDWVIVENPCF--YGALQALERLRLKALSIATDVKEG 225
Cdd:PLN02231 173 LRDAIAAGIeARDGFPADPNDIFLTDGASPAVHMMMQLlIRSEKDGILCPIPQYplYSASIALHGGTLVPYYLDEATGWG 252
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 226 IDLTALEQALQEYPVKA----CWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREK 291
Cdd:PLN02231 253 LEISELKKQLEDARSKGitvrALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDK 322
|
|
| PRK08354 |
PRK08354 |
putative aminotransferase; Provisional |
169-335 |
4.96e-04 |
|
putative aminotransferase; Provisional
Pssm-ID: 169399 Cd Length: 311 Bit Score: 42.02 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 169 EIVITTGAMEALNLsLQAVTEPGDWVIVENPCfYGalqalERLRLKALSIATDVKEGIDLTALEQALQEYPVKacwLMTN 248
Cdd:PRK08354 56 PIVITAGITEALYL-IGILALRDRKVIIPRHT-YG-----EYERVARFFAARIIKGPNDPEKLEELVERNSVV---FFCN 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 249 SQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREKPlpakawdRADSVLHCSSFSKCL-VPGFRIGWVAAGK 327
Cdd:PRK08354 126 PNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYgLPGIRVGYVKGFE 198
|
....*...
gi 496060336 328 HARRIQRL 335
Cdd:PRK08354 199 EAFRSVRM 206
|
|
| PTZ00377 |
PTZ00377 |
alanine aminotransferase; Provisional |
145-292 |
7.27e-04 |
|
alanine aminotransferase; Provisional
Pssm-ID: 240391 [Multi-domain] Cd Length: 481 Bit Score: 41.87 E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 145 PGNAELRHAIARrYAQQ--GMTISPDEIVITTGAMEALNLSLQA-VTEPGDWVIVENPCF--YGALQALerlrLKALSIA 219
Cdd:PTZ00377 115 AGYPFVRKAVAA-FIERrdGVPKDPSDIFLTDGASSGIKLLLQLlIGDPSDGVMIPIPQYplYSAAITL----LGGKQVP 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 220 TDVKE----GIDLTALEQALQEYPVKA----CWLMTNSQNPLGFTLSAEKKARLVALLEKYHVILIEDDVYSELYFGREK 291
Cdd:PTZ00377 190 YYLDEekgwSLDQEELEEAYEQAVRNGitprALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEK 269
|
.
gi 496060336 292 P 292
Cdd:PTZ00377 270 P 270
|
|
| PRK09265 |
PRK09265 |
aminotransferase AlaT; Validated |
139-350 |
1.59e-03 |
|
aminotransferase AlaT; Validated
Pssm-ID: 181738 Cd Length: 404 Bit Score: 40.56 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 139 VIENLPpgNAE----------LRHAIARRYAQQGMT-ISPDEIVITTGAMEALNLSLQAVTEPGDWVIVENPCFygalqa 207
Cdd:PRK09265 58 VIRNLP--TAQgysdskglfsARKAIMQYYQQKGIPdVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDY------ 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 208 leRLRLKALSIA-------------------TDVKEGIdlTALEQALqeypvkacwLMTNSQNPLGFTLSAEKKARLVAL 268
Cdd:PRK09265 130 --PLWTAAVSLSggkpvhylcdeeagwfpdlDDIRSKI--TPRTKAI---------VIINPNNPTGAVYSKELLEEIVEI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 269 LEKYHVILIEDDVYSELYFGREKPLPAKAWdrADSVLhCSSF---SKCL-VPGFRIGWVA---AGKHARR-IQRLQLMST 340
Cdd:PRK09265 197 ARQHNLIIFADEIYDKILYDGAVHISIASL--APDLL-CVTFnglSKAYrVAGFRVGWMVlsgPKKHAKGyIEGLDMLAS 273
|
250
....*....|..
gi 496060336 341 --LSTSSPMQLA 350
Cdd:PRK09265 274 mrLCANVPAQHA 285
|
|
| PLN02368 |
PLN02368 |
alanine transaminase |
114-292 |
1.80e-03 |
|
alanine transaminase
Pssm-ID: 177996 [Multi-domain] Cd Length: 407 Bit Score: 40.55 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 114 DPR---LFPLQQLNRS---LAQVSKTATAMSVIENLPPGNAELRHAIARRyaqQGMTISPDEIVITTGAMEALNLSLQAV 187
Cdd:PLN02368 74 DPNvglLFPADAIARAkhyLSLTSGGLGAYSDSRGLPGVRKEVAEFIERR---DGYPSDPELIFLTDGASKGVMQILNAV 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 188 TE-PGDWVIVENPCF--YGALQALERLRLKALSIATDVKEGIDLTALEQALQEYPVKA----CWLMTNSQNPLGFTLSAE 260
Cdd:PLN02368 151 IRgEKDGVLVPVPQYplYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGitvrAMVIINPGNPTGQCLSEA 230
|
170 180 190
....*....|....*....|....*....|..
gi 496060336 261 KKARLVALLEKYHVILIEDDVYSELYFGREKP 292
Cdd:PLN02368 231 NLREILKFCYQERLVLLGDEVYQQNIYQDERP 262
|
|
| PRK02610 |
PRK02610 |
histidinol-phosphate transaminase; |
146-336 |
2.32e-03 |
|
histidinol-phosphate transaminase;
Pssm-ID: 235053 Cd Length: 374 Bit Score: 40.08 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 146 GNAELRHAIAR---RYAQQGMTISPDEIVITTGAMEaLNLSLQAVTEPGDW--VIVENPCF--YGALQalERLRLKALSI 218
Cdd:PRK02610 67 GHEALKQAIAEyvnESAAGSSQITPANISVGNGSDE-LIRSLLIATCLGGEgsILVAEPTFsmYGILA--QTLGIPVVRV 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496060336 219 ATDVKE-GIDLTALEQALQEY---PVKACWLMtNSQNPLGFTLSAEKKARLVALLEKYHVILieDDVYSElyFGREKPLP 294
Cdd:PRK02610 144 GRDPETfEIDLAAAQSAIEQTqnpPVRVVFVV-HPNSPTGNPLTAAELEWLRSLPEDILVVI--DEAYFE--FSQTTLVG 218
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 496060336 295 aKAWDRADSVLhCSSFSKCL-VPGFRIGWVAAgkHARRIQRLQ 336
Cdd:PRK02610 219 -ELAQHPNWVI-LRTFSKAFrLAAHRVGYAIG--HPELIAVLE 257
|
|
| |
