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Conserved domains on  [gi|496156145|ref|WP_008880652|]
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MULTISPECIES: PTS transporter subunit EIIC [Geobacillus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
murP super family cl30319
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
5-447 4.79e-107

PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed


The actual alignment was detected with superfamily member PRK09586:

Pssm-ID: 181971 [Multi-domain]  Cd Length: 476  Bit Score: 325.48  E-value: 4.79e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIE-DETLQIVVGPGVVNKVAAALCELtgL 83
Cdd:PRK09586   6 SELLNTILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILsDDQVQVVLGPGKAQRAAKAMNEL--L 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  84 ELGEVIEDGIEDIAERTKAEVKARQQTPLKRLLRKIGSIFIPLIPGLVASGIINGIANFAKNAGVDPQTTWLQLLLLIGG 163
Cdd:PRK09586  84 GEAAAPVQDLAEIAAQNKRQLKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIEQVMHVPADAQGTLPDALNY 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 164 G------IFASLGVLVGYNTAKEFGGTPVLGAIAG---ILVFNPAM------GDIKLFGEALTPgRGGLFAVLLAAWLMA 228
Cdd:PRK09586 164 MkvfskgLFTFLSILIGYNAQQAFGGTGVNGAIIAslfLLGYNPAAttgyyaGFHDFFGLPIDP-RGNIIGVLIAAIAGA 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 229 VVEKRVRSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLAGWLSLAItSGLKAVLDiGGVVAGAVLAGTFLPLVMVGLHHG 308
Cdd:PRK09586 243 RIERMVRRFMPDDLDMILTSLITLLITGALAFLIIMPLGGWLFEGM-SWLFMHLN-SNPFGCAVLAGLFLIAVVFGVHQG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 309 LTPIHMELIQKLGSTPLLPVLAMAGAGQVGAAIAVYVKT-KNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRPFVTAC 387
Cdd:PRK09586 321 FIPVYFALMDSQGFNSLFPILAMAGAGQVGAALALYWRAqKHSALRTQVKGAIIPGLLGVGEPLIYGVTLPRMKPFVTAC 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 496156145 388 LGAAVGGAFQAVMKTAALGIGV------SGLSLIPLIADTKYV-----IYFIGLVISYTFGFLFTYWFGFK 447
Cdd:PRK09586 401 LGGAAGGFFIGLIAWLGLPVGLnsvfgpSGLVALPLMTSAQGIlpgmaVYAGGLLVAYVCGFIFTTLFGCK 471
 
Name Accession Description Interval E-value
murP PRK09586
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
5-447 4.79e-107

PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed


Pssm-ID: 181971 [Multi-domain]  Cd Length: 476  Bit Score: 325.48  E-value: 4.79e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIE-DETLQIVVGPGVVNKVAAALCELtgL 83
Cdd:PRK09586   6 SELLNTILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILsDDQVQVVLGPGKAQRAAKAMNEL--L 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  84 ELGEVIEDGIEDIAERTKAEVKARQQTPLKRLLRKIGSIFIPLIPGLVASGIINGIANFAKNAGVDPQTTWLQLLLLIGG 163
Cdd:PRK09586  84 GEAAAPVQDLAEIAAQNKRQLKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIEQVMHVPADAQGTLPDALNY 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 164 G------IFASLGVLVGYNTAKEFGGTPVLGAIAG---ILVFNPAM------GDIKLFGEALTPgRGGLFAVLLAAWLMA 228
Cdd:PRK09586 164 MkvfskgLFTFLSILIGYNAQQAFGGTGVNGAIIAslfLLGYNPAAttgyyaGFHDFFGLPIDP-RGNIIGVLIAAIAGA 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 229 VVEKRVRSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLAGWLSLAItSGLKAVLDiGGVVAGAVLAGTFLPLVMVGLHHG 308
Cdd:PRK09586 243 RIERMVRRFMPDDLDMILTSLITLLITGALAFLIIMPLGGWLFEGM-SWLFMHLN-SNPFGCAVLAGLFLIAVVFGVHQG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 309 LTPIHMELIQKLGSTPLLPVLAMAGAGQVGAAIAVYVKT-KNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRPFVTAC 387
Cdd:PRK09586 321 FIPVYFALMDSQGFNSLFPILAMAGAGQVGAALALYWRAqKHSALRTQVKGAIIPGLLGVGEPLIYGVTLPRMKPFVTAC 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 496156145 388 LGAAVGGAFQAVMKTAALGIGV------SGLSLIPLIADTKYV-----IYFIGLVISYTFGFLFTYWFGFK 447
Cdd:PRK09586 401 LGGAAGGFFIGLIAWLGLPVGLnsvfgpSGLVALPLMTSAQGIlpgmaVYAGGLLVAYVCGFIFTTLFGCK 471
PtsG1 COG1263
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ...
105-452 8.31e-87

Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];


Pssm-ID: 440875 [Multi-domain]  Cd Length: 463  Bit Score: 272.97  E-value: 8.31e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 105 KARQQTPLKRLLRKIGSIFIPLIPGLVASGIINGIANFAKNAGVDPQTTWLQLLLLIGGGI----FASLGVLVGYNTAKE 180
Cdd:COG1263    1 AKKKKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEGSFLSGTYQILNAAgdavFYFLPLLFAIGAAKG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 181 FGGTPVLGAIAGILVFNPAM--------GDIKLFG-EALTPGRGGLFAVLLAAWLMAVVEKRVRSFVPNAVDIIVTPLIT 251
Cdd:COG1263   81 FGGNPALAAVIGYLLVHPTLlnayavagGYISFLGiPTLIGYQGGVFPGILAGWLAAYLEKFLKKKLPDALGFFFVPILT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 252 VLIVCLFTLIAVQPLAGWLSLAITSGLKAVLDIGGVVAGAVLAGTFLPLVMVGLHHGLTPIHMELIQKLGSTPLLPVLAM 331
Cdd:COG1263  161 LLIMVPLALLVIGPIWPPIGNGIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHGLNPIFWFLLGGTGDDGLFPILAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 332 AGAGQVGAAIAVYVKTK-NKRLRNIIKGALPVGFL-GIGEPLLYGVTLPLGRPFVTACLGAAVGGAFQAVMKTAALGIGV 409
Cdd:COG1263  241 AMFGQPGAALAVYLKAKpNKKVKGLAISAALTAFLtGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFSFGV 320
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 496156145 410 SGLSLIPLIAD---TKYVIYFIGLVISYTFGFLFTYWFGFKEEMAA 452
Cdd:COG1263  321 GGLIDFPSILNpgaTNLLLYLIGLVIAFVYYFVFTFLIGREDEEEE 366
pts-Glc TIGR00852
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ...
166-432 1.26e-32

PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]


Pssm-ID: 273299  Cd Length: 289  Bit Score: 125.12  E-value: 1.26e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  166 FASLGVLVGYNTAKEFGGTPVLGA-IAGILVF----------NPAMGDIKLFGEALTPGRGGLFAVLLAAWLMAVVEKRV 234
Cdd:TIGR00852   5 FFFLPLLFAIGAAKGFGGNPYLGAaLAGILVHpvlnnamgvgAQAVGNFFGFEIAKVGYTGVVGPIIVGAIALALHERFL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  235 RSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLA-GWLSLAITSGLKAVLDIGGVVAGAVLAGTFLPLVMVGLHHGLTPIH 313
Cdd:TIGR00852  85 DKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGrVWPPVGISALLHWLYSAGGALGGAIFGFLYRLLVPTGLHHIFYAIF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  314 MELIQ---KLGSTPLLPVLAMAGAGQVGAAIAVYVKTKNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRPFVTACLGA 390
Cdd:TIGR00852 165 IQLIAggtVIGGGQVIPGDALANMAQGGAALAVFFTAGDAKFKSIGLPAAFSAGLGITEPAMYGVALRERRPFVAGLIGS 244
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 496156145  391 AVGGAFQAVMKTAALGIGVSGLSLIPLI---ADTKYVIYFIGLVI 432
Cdd:TIGR00852 245 ALLTAFLTGITEPLEFLFLFGAPGLYSIhavLAGSIFTVAIGMGI 289
PTS_IIB_glc cd00212
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ...
5-82 1.45e-25

PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation


Pssm-ID: 238130 [Multi-domain]  Cd Length: 78  Bit Score: 99.14  E-value: 1.45e-25
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIE-DETLQIVVGPGvVNKVAAALCELTG 82
Cdd:cd00212    1 EQLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKnGGQYQVIIGPG-VADVYKEAIKLLG 78
PTS_EIIC pfam02378
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ...
120-390 3.28e-25

Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.


Pssm-ID: 367061  Cd Length: 315  Bit Score: 105.12  E-value: 3.28e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  120 GSIFIPLIPGLVASGIINGIANF------AKNAGVDPQTTWLQLLLLIGGGIFASLGVLVGYNTAKEF-GGTPVLGAIAG 192
Cdd:pfam02378   1 GDGFMPPIPLLIAGGILLGLGNLpndttgLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLaGGDGVAGAAGL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  193 I--LVFNPAM--------------GDIKLFGEALTPGRGGLFAVLLAAWLMAVVEKRVRSFVPNAVDIIVTPLITVLIVC 256
Cdd:pfam02378  81 IglLSFNLAAaisvaltaaglsggGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKNITIKLPDSLPFFVGKRFVPIITG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  257 LFTLIAVQPLAGWLSLAITSGLKAVLDI----GGVVAGAVLAGTFLPLVMVGLHHGLTPIHMELI----------QKLGS 322
Cdd:pfam02378 161 FVTLLVIGPVLGLIWPAIQGGLNALGLLliiaGGILGGLIFGFLERLLWPFGLHGAFIAIFWFLPiggsnpianqQAYGA 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 496156145  323 TP-----LLPVLAMAGAGQVGAAIAVYVKT-KNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRP-FVTACLGA 390
Cdd:pfam02378 241 GAahiltGGFDVMFGGPGATLALYAAAFLFkKSKVKKLLGSAALTPFLFGITEPLEFGFPFVLNPPfFIPAILAG 315
 
Name Accession Description Interval E-value
murP PRK09586
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
5-447 4.79e-107

PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed


Pssm-ID: 181971 [Multi-domain]  Cd Length: 476  Bit Score: 325.48  E-value: 4.79e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIE-DETLQIVVGPGVVNKVAAALCELtgL 83
Cdd:PRK09586   6 SELLNTILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILsDDQVQVVLGPGKAQRAAKAMNEL--L 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  84 ELGEVIEDGIEDIAERTKAEVKARQQTPLKRLLRKIGSIFIPLIPGLVASGIINGIANFAKNAGVDPQTTWLQLLLLIGG 163
Cdd:PRK09586  84 GEAAAPVQDLAEIAAQNKRQLKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIEQVMHVPADAQGTLPDALNY 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 164 G------IFASLGVLVGYNTAKEFGGTPVLGAIAG---ILVFNPAM------GDIKLFGEALTPgRGGLFAVLLAAWLMA 228
Cdd:PRK09586 164 MkvfskgLFTFLSILIGYNAQQAFGGTGVNGAIIAslfLLGYNPAAttgyyaGFHDFFGLPIDP-RGNIIGVLIAAIAGA 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 229 VVEKRVRSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLAGWLSLAItSGLKAVLDiGGVVAGAVLAGTFLPLVMVGLHHG 308
Cdd:PRK09586 243 RIERMVRRFMPDDLDMILTSLITLLITGALAFLIIMPLGGWLFEGM-SWLFMHLN-SNPFGCAVLAGLFLIAVVFGVHQG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 309 LTPIHMELIQKLGSTPLLPVLAMAGAGQVGAAIAVYVKT-KNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRPFVTAC 387
Cdd:PRK09586 321 FIPVYFALMDSQGFNSLFPILAMAGAGQVGAALALYWRAqKHSALRTQVKGAIIPGLLGVGEPLIYGVTLPRMKPFVTAC 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 496156145 388 LGAAVGGAFQAVMKTAALGIGV------SGLSLIPLIADTKYV-----IYFIGLVISYTFGFLFTYWFGFK 447
Cdd:PRK09586 401 LGGAAGGFFIGLIAWLGLPVGLnsvfgpSGLVALPLMTSAQGIlpgmaVYAGGLLVAYVCGFIFTTLFGCK 471
PtsG1 COG1263
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ...
105-452 8.31e-87

Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];


Pssm-ID: 440875 [Multi-domain]  Cd Length: 463  Bit Score: 272.97  E-value: 8.31e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 105 KARQQTPLKRLLRKIGSIFIPLIPGLVASGIINGIANFAKNAGVDPQTTWLQLLLLIGGGI----FASLGVLVGYNTAKE 180
Cdd:COG1263    1 AKKKKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEGSFLSGTYQILNAAgdavFYFLPLLFAIGAAKG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 181 FGGTPVLGAIAGILVFNPAM--------GDIKLFG-EALTPGRGGLFAVLLAAWLMAVVEKRVRSFVPNAVDIIVTPLIT 251
Cdd:COG1263   81 FGGNPALAAVIGYLLVHPTLlnayavagGYISFLGiPTLIGYQGGVFPGILAGWLAAYLEKFLKKKLPDALGFFFVPILT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 252 VLIVCLFTLIAVQPLAGWLSLAITSGLKAVLDIGGVVAGAVLAGTFLPLVMVGLHHGLTPIHMELIQKLGSTPLLPVLAM 331
Cdd:COG1263  161 LLIMVPLALLVIGPIWPPIGNGIAAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHGLNPIFWFLLGGTGDDGLFPILAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 332 AGAGQVGAAIAVYVKTK-NKRLRNIIKGALPVGFL-GIGEPLLYGVTLPLGRPFVTACLGAAVGGAFQAVMKTAALGIGV 409
Cdd:COG1263  241 AMFGQPGAALAVYLKAKpNKKVKGLAISAALTAFLtGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFSFGV 320
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 496156145 410 SGLSLIPLIAD---TKYVIYFIGLVISYTFGFLFTYWFGFKEEMAA 452
Cdd:COG1263  321 GGLIDFPSILNpgaTNLLLYLIGLVIAFVYYFVFTFLIGREDEEEE 366
PRK09824 PRK09824
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
5-446 7.33e-60

PTS system beta-glucoside-specific transporter subunits IIABC; Provisional


Pssm-ID: 236627 [Multi-domain]  Cd Length: 627  Bit Score: 206.49  E-value: 7.33e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIEDE-TLQIVVGpGVVNKVAAALCEltgl 83
Cdd:PRK09824   4 TELAREIVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKNPGVIMVVESGgQFQVVIG-NHVADVFLAVNS---- 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  84 elgeviEDGIEDIAERTKAEVKarQQTPLKRLLRKIGSIFIPLIPGLVASGIINGIANFAKNAGvdpqttWLQLLLLIGG 163
Cdd:PRK09824  79 ------VAGLGEKAQQAPENDK--KGNLLNRFIDVISGIFTPLIGVMAATGILKGMLALALTFG------WTTEQSGTYK 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 164 GIFAS-------LGVLVGYNTAKEFGGTP-VLGAIAGILVfNPAMgdIKLFGEALTPGRGGLF----------------A 219
Cdd:PRK09824 145 ILFAAsdalfffFPIILGYTAGKKFGGNPfTAMVIGGALV-HPLM--IAAFEAGQKADALGLDflgipvtllnysssviP 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 220 VLLAAWLMAVVEKRVRSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLAGWLSLAITSGLKAVLDIGGVVAGAVLAGTFLP 299
Cdd:PRK09824 222 IIFSAWLCSILERRLNAWLPSAIKNFFTPLLCLMVIVPLTFLLIGPLATWLSELLAAGYQWLYQAVPAFAGAVMGAFWQV 301
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 300 LVMVGLHHGLTPIHMELIQKLGSTPLLPVLAMAGAGQVGAAIAVYVKTKNKRLRNIIKGALPVGFLGIGEPLLYGVTLPL 379
Cdd:PRK09824 302 FVIFGLHWGLVPLMINNLTVLGHDTMLPLLMPAVMAQVGAALGVFLCTRDAQKKVVAGSAFLAGLFGITEPAVYGVNLPL 381
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 496156145 380 GRPFVTACLGAAVGGAFQAVMKTAALGIGVSGL----SLIPLIA-DTKYVIYFIGLVISYTFGFLFTYWFGF 446
Cdd:PRK09824 382 KRPFIFGCISGALGAAIIGYAQTKVYSFGLPSIftfmQTIPPTGiDFTVWASVIGTVIAIGCAFVGTVMFGF 453
PRK11007 PRK11007
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional
4-441 9.41e-47

PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional


Pssm-ID: 182896  Cd Length: 473  Bit Score: 167.94  E-value: 9.41e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145   4 EQQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIEDE-TLQIVVGPGVvNKVAAALCELTG 82
Cdd:PRK11007   6 NQQDIDRLIELVGGRENIATVSHCITRLRFVLNDPANADPKEIEQLPMVKGCFTNAgQFQVVIGTEV-GDYYKALIATTG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  83 LelgeviedgieDIAERTKAEVKARQ-QTPLKRLLRKIGSIFIPLIPGLVASGIINGIAN-------FAKNAGVDPQTTW 154
Cdd:PRK11007  85 Q-----------AEVDKEQAKKAARQnMKWHERLISHFAEIFFPLLPALISGGLILGFRNvigdipmSDGQTLAQMYPFW 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 155 LQLLL---LIGGGIFASLGVLVGYNTAKEFGGTPVLGAIAGILVFNPAMGDIKLFGEAlTPG--RGGLFAV--------- 220
Cdd:PRK11007 154 QTIYDflwLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQ-LPEvwDFGLFSIekvgyqaqv 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 221 ---LLAAWLMAVVEKRVRSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLAGWLSLAITSGLKAVLDIGGVVAGAVLAGTF 297
Cdd:PRK11007 233 ipaLLAGLALGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVKALMTGSFAPIGAALFGFL 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 298 L-PLVMVGLHHGLTPIHMELIQKLGSTPLLPVLAMAGAGQVGAAIAVYVKTKNKRLRNIIKGALPVGFLGIGEPLLYGVT 376
Cdd:PRK11007 313 YaPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQASAVVGIIIISRKHNEREISVPAAISAYLGVTEPAMYGIN 392
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 496156145 377 LPLGRPFVTACLGAAVGGAFQAVMKTAALGIGVSGLSLIPLIADTKYVIYFIGLVISYTFGFLFT 441
Cdd:PRK11007 393 LKYRFPMLCAMIGSALAGLICGLNGVMANGIGVGGLPGILSIQPQYWQVYALAMLVAIVVPIVLT 457
pts-Glc TIGR00852
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ...
166-432 1.26e-32

PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]


Pssm-ID: 273299  Cd Length: 289  Bit Score: 125.12  E-value: 1.26e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  166 FASLGVLVGYNTAKEFGGTPVLGA-IAGILVF----------NPAMGDIKLFGEALTPGRGGLFAVLLAAWLMAVVEKRV 234
Cdd:TIGR00852   5 FFFLPLLFAIGAAKGFGGNPYLGAaLAGILVHpvlnnamgvgAQAVGNFFGFEIAKVGYTGVVGPIIVGAIALALHERFL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  235 RSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLA-GWLSLAITSGLKAVLDIGGVVAGAVLAGTFLPLVMVGLHHGLTPIH 313
Cdd:TIGR00852  85 DKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGrVWPPVGISALLHWLYSAGGALGGAIFGFLYRLLVPTGLHHIFYAIF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  314 MELIQ---KLGSTPLLPVLAMAGAGQVGAAIAVYVKTKNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRPFVTACLGA 390
Cdd:TIGR00852 165 IQLIAggtVIGGGQVIPGDALANMAQGGAALAVFFTAGDAKFKSIGLPAAFSAGLGITEPAMYGVALRERRPFVAGLIGS 244
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 496156145  391 AVGGAFQAVMKTAALGIGVSGLSLIPLI---ADTKYVIYFIGLVI 432
Cdd:TIGR00852 245 ALLTAFLTGITEPLEFLFLFGAPGLYSIhavLAGSIFTVAIGMGI 289
PRK09796 PRK09796
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
7-448 9.78e-29

PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional


Pssm-ID: 182081  Cd Length: 472  Bit Score: 117.98  E-value: 9.78e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145   7 IAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVI-EDETLQIVVGpgvvNKVAAALCELTGLEL 85
Cdd:PRK09796   8 LARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVrSDNQCQVIIG----NTVSQAFQEVVSLLP 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  86 GEVIEdgiediaertkAEVKARQQTPLKRLLRKIGSIFI----PLIPGLVASGIINGIANFAKNAGVDPQ-TTWLQLLLL 160
Cdd:PRK09796  84 GDMQP-----------AQPVGKPKLTLRRIGAGILDALIgtmsPLIPAIIGGSMVKLLAMILEMSGVLTKgSPTLTILNV 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 161 IGGGIFASLGVLVGYNTAKEFGGTPVLG-AIAGILVfNPAMgdIKLFGEAlTPGRGGLFA---------------VLLAA 224
Cdd:PRK09796 153 IGDGAFFFLPLMVAASAAIKFKTNMSLAiAIAGVLV-HPSF--IELMAKA-AQGEHVEFAlipvtavkytytvipALVMT 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 225 WLMAVVEKRVRSFVPNAVDIIVTPLITVLIVCLFTLIAVQPLAGWLSLAITSGLKAVLDIGGVVAGAVLAGTFLPLVMVG 304
Cdd:PRK09796 229 WCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTG 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 305 LHHGLTPIHMELIQKLGSTPL-LPVLAMAGAGQVGAAIAVYVKTKNKRLRNIIKGALPVGFL-GIGEPLLYGVTLPLGRP 382
Cdd:PRK09796 309 MHRVFTPTIIQTIAETGKEGMvMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMaGISEPALYGVAIRLKRP 388
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 496156145 383 FVtACL------GAAVGGAFQAVMKTAALGIGVSGLSLIPliADTKYVIYFIG-LVISYTFGFLFTYWFGFKE 448
Cdd:PRK09796 389 LI-ASLisgficGAVAGMAGLASHSMAAPGLFTSVQFFDP--ANPMSIVWVFAvMALAVVLSFILTLLLGFED 458
PTS_IIB_glc cd00212
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ...
5-82 1.45e-25

PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation


Pssm-ID: 238130 [Multi-domain]  Cd Length: 78  Bit Score: 99.14  E-value: 1.45e-25
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIE-DETLQIVVGPGvVNKVAAALCELTG 82
Cdd:cd00212    1 EQLAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKnGGQYQVIIGPG-VADVYKEAIKLLG 78
PTS_EIIC pfam02378
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ...
120-390 3.28e-25

Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.


Pssm-ID: 367061  Cd Length: 315  Bit Score: 105.12  E-value: 3.28e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  120 GSIFIPLIPGLVASGIINGIANF------AKNAGVDPQTTWLQLLLLIGGGIFASLGVLVGYNTAKEF-GGTPVLGAIAG 192
Cdd:pfam02378   1 GDGFMPPIPLLIAGGILLGLGNLpndttgLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLaGGDGVAGAAGL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  193 I--LVFNPAM--------------GDIKLFGEALTPGRGGLFAVLLAAWLMAVVEKRVRSFVPNAVDIIVTPLITVLIVC 256
Cdd:pfam02378  81 IglLSFNLAAaisvaltaaglsggGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKNITIKLPDSLPFFVGKRFVPIITG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  257 LFTLIAVQPLAGWLSLAITSGLKAVLDI----GGVVAGAVLAGTFLPLVMVGLHHGLTPIHMELI----------QKLGS 322
Cdd:pfam02378 161 FVTLLVIGPVLGLIWPAIQGGLNALGLLliiaGGILGGLIFGFLERLLWPFGLHGAFIAIFWFLPiggsnpianqQAYGA 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 496156145  323 TP-----LLPVLAMAGAGQVGAAIAVYVKT-KNKRLRNIIKGALPVGFLGIGEPLLYGVTLPLGRP-FVTACLGA 390
Cdd:pfam02378 241 GAahiltGGFDVMFGGPGATLALYAAAFLFkKSKVKKLLGSAALTPFLFGITEPLEFGFPFVLNPPfFIPAILAG 315
PtsG2 COG1264
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
5-81 1.03e-24

Phosphotransferase system IIB components [Carbohydrate transport and metabolism];


Pssm-ID: 440876 [Multi-domain]  Cd Length: 76  Bit Score: 96.73  E-value: 1.03e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 496156145   5 QQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIeGVMGVIE-DETLQIVVGPGvVNKVAAALCELT 81
Cdd:COG1264    1 KELAKDILEALGGKENIVSVDHCATRLRVTVKDPSKVDEAALKKL-GVKGVVKnGGQVQVIIGPG-VDKVADEIEKLL 76
PRK14905 PRK14905
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ...
6-80 3.48e-12

triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional


Pssm-ID: 184898 [Multi-domain]  Cd Length: 355  Bit Score: 67.36  E-value: 3.48e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 496156145   6 QIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIE-DETLQIVVGPGVVNKVAAALCEL 80
Cdd:PRK14905 276 EIAIQLIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIDCVKGLFSiANQYQIILGAGIVEKIHEEMKAL 351
PTS_EIIB pfam00367
phosphotransferase system, EIIB;
11-40 1.95e-11

phosphotransferase system, EIIB;


Pssm-ID: 459785 [Multi-domain]  Cd Length: 32  Bit Score: 58.15  E-value: 1.95e-11
                          10        20        30
                  ....*....|....*....|....*....|
gi 496156145   11 ILQYVGGKENITRVAHCMTRVRVSLRDPGK 40
Cdd:pfam00367   3 ILEALGGKENIKSVDHCATRLRLTVKDESK 32
EIIB_glc TIGR00826
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ...
4-66 3.29e-06

PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]


Pssm-ID: 273288 [Multi-domain]  Cd Length: 88  Bit Score: 45.04  E-value: 3.29e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 496156145    4 EQQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIEDETLQIVVG 66
Cdd:TIGR00826  26 GVFTAAGQIQALGGTGNVNKVDACITRLRVGVADVSKVDDAVLKKLGAHGVNPLQRAVQVISG 88
PRK10110 PRK10110
PTS maltose transporter subunit IICB;
8-69 6.02e-06

PTS maltose transporter subunit IICB;


Pssm-ID: 182245 [Multi-domain]  Cd Length: 530  Bit Score: 48.57  E-value: 6.02e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 496156145   8 AASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIeGVMGVIE--DETLQIVVGPGV 69
Cdd:PRK10110 452 VPAILEALGGADNIVSLDNCITRLRLSVKDMSLVDVQALKDN-RAIGVVQlnQHNLQVVIGPQV 514
PRK11089 PRK11089
PTS system glucose-specific transporter subunits IIBC; Provisional
6-69 3.42e-05

PTS system glucose-specific transporter subunits IIBC; Provisional


Pssm-ID: 182955 [Multi-domain]  Cd Length: 477  Bit Score: 46.25  E-value: 3.42e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 496156145   6 QIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIeGVMGViedetlqIVVGPGV 69
Cdd:PRK11089 400 EMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGV-------VVAGSGV 455
PRK09702 PRK09702
PTS sugar transporter subunit IIB;
3-66 1.59e-04

PTS sugar transporter subunit IIB;


Pssm-ID: 77355 [Multi-domain]  Cd Length: 161  Bit Score: 42.01  E-value: 1.59e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 496156145   3 REQQIAASILQYVGGKENITRVAHCMTRVRVSLRDPGKANIDSLKQIEGVMGVIED-ETLQIVVG 66
Cdd:PRK09702  68 KELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSgDAIQVIIG 132
FrwC COG1299
Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and ...
215-432 1.64e-03

Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism];


Pssm-ID: 440910 [Multi-domain]  Cd Length: 469  Bit Score: 40.64  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 215 GGLFAVLLAAWLMAVVEKRVRsfVPNAVD----IIVTPLITVLIVCLFTLIAVQPLAGWLSLAITSGLKAVLDIGGVVAG 290
Cdd:COG1299  227 GGIIAGFLAGYVVLWLKKKIK--LPKSLEglkpILIIPLLGTLITGLLMIYVIGPPIAALNTALTNWLNSMSGSNAVLLG 304
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 291 AVL---------------AGTFlplvMVGLhhgltpihmeliqkLGSTPLLPVLAMAGAGQV---GAAIAVYVKTK--NK 350
Cdd:COG1299  305 AILgammafdmggpvnkaAYAF----GTGL--------------LASGIYAPMAAVMAAGMVpplGLALATLLFKKkfTE 366
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145 351 RLRNIIKGALPVGFLGIGEPLLygvtlplgrPFVTA---------CLGAAVGGAFqavmkTAALGIGV----SGLSLIPL 417
Cdd:COG1299  367 EEREAGKAAFILGLSFITEGAI---------PFAAAdplrvipsnMIGSAVAGAL-----SMLFGVTLpaphGGIFVLPL 432
                        250
                 ....*....|....*
gi 496156145 418 IadTKYVIYFIGLVI 432
Cdd:COG1299  433 V--SNPLLYLLAIAI 445
PTS_EIIC_2 pfam13303
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ...
122-276 6.51e-03

Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.


Pssm-ID: 433101  Cd Length: 327  Bit Score: 38.33  E-value: 6.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496156145  122 IFIPLIPGLVASGIINGIANFAKNAGVDPQTTWLqlllligggifasLGVLVGYNTAKEFGGTPVLGAIAGILVFNPAMG 201
Cdd:pfam13303  11 IFATLIPGAILGEIGGALLILSLLITIGTIAQSL-------------LGPAIGALVALQLGANPLVSASVGAAGFIGSGA 77
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 496156145  202 DIKLFGEALTPGRGGLFAVLLAAWLMAVVEKRVrSFVPNAVDIIVTPLITVLI---VCLFTLIAVQPLAGWLSLAITS 276
Cdd:pfam13303  78 VKFTEGGWFLIGTGDPINAFLAAAIAVLVGKLI-GNKKTKLDIIVLPIVVIVVgglIGLLILPYVKPITEAIGNVINT 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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