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Conserved domains on  [gi|496663605|ref|WP_009306098|]
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MULTISPECIES: DmsC/YnfH family molybdoenzyme membrane anchor subunit [Eggerthella]

Protein Classification

dimethyl sulfoxide reductase anchor subunit family protein( domain architecture ID 10007172)

dimethyl sulfoxide (DMSO) reductase anchor subunit family protein similar to Escherichia coli dimethyl sulfoxide (DMSO) reductase anchor subunit DmsC which anchors the DMSO reductase complex to the periplasmic side of the inner membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DmsC COG3302
DMSO reductase anchor subunit DmsC [Energy production and conversion];
1-289 1.15e-21

DMSO reductase anchor subunit DmsC [Energy production and conversion];


:

Pssm-ID: 442531  Cd Length: 282  Bit Score: 91.87  E-value: 1.15e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605   1 METQWPLVIFTLFVCLTCGTLGGMSILALKG----QGRNLQMTALITSAVSLVVGGIGAFLHLEHWERIFNGFGHI-TSG 75
Cdd:COG3302    1 MHPEWPLVLFTVLSQAGVGLFLALALALLLGllspASRKRLLRALLLALVLLGVGLLASTFHLGHPLRAWRAFSNLrTSW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605  76 ITQELIGCVALAIVIVAWFVVLRGGKP---VPKALAWATLAVAVLMVVATAHSYLMPARPAWGLALV-AFYLGNACLLGA 151
Cdd:COG3302   81 LSREIVAAVLFFALAGLYALLAWLGKLpggLRKLLGLLAALLGLALVFAMAMIYQIKTVPTWNTPLTpLNFLLTALALGA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605 152 AAVWLISVLKKDEAVEATGIQLTFIAALVqivadvvfviACAMAKIAQFGYYADPTSMTTApthvdslMTVMVSGAGAPM 231
Cdd:COG3302  161 LLAALLLALAGVDLRALKALALLALLALV----------LALAVLVAYLARLASIGSATQT-------AAALLTREFGHL 223

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 496663605 232 FWGSIVSVIVAAACAFVA-KKKVGASKTLMVVAAIGALATSVMFRVLIYQLGYPVVLMY 289
Cdd:COG3302  224 LALRLVLLALGFVLPLLPlLRGSTAALALLALAFALVLAGELVGRWLFYALAVHVGMLY 282
 
Name Accession Description Interval E-value
DmsC COG3302
DMSO reductase anchor subunit DmsC [Energy production and conversion];
1-289 1.15e-21

DMSO reductase anchor subunit DmsC [Energy production and conversion];


Pssm-ID: 442531  Cd Length: 282  Bit Score: 91.87  E-value: 1.15e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605   1 METQWPLVIFTLFVCLTCGTLGGMSILALKG----QGRNLQMTALITSAVSLVVGGIGAFLHLEHWERIFNGFGHI-TSG 75
Cdd:COG3302    1 MHPEWPLVLFTVLSQAGVGLFLALALALLLGllspASRKRLLRALLLALVLLGVGLLASTFHLGHPLRAWRAFSNLrTSW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605  76 ITQELIGCVALAIVIVAWFVVLRGGKP---VPKALAWATLAVAVLMVVATAHSYLMPARPAWGLALV-AFYLGNACLLGA 151
Cdd:COG3302   81 LSREIVAAVLFFALAGLYALLAWLGKLpggLRKLLGLLAALLGLALVFAMAMIYQIKTVPTWNTPLTpLNFLLTALALGA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605 152 AAVWLISVLKKDEAVEATGIQLTFIAALVqivadvvfviACAMAKIAQFGYYADPTSMTTApthvdslMTVMVSGAGAPM 231
Cdd:COG3302  161 LLAALLLALAGVDLRALKALALLALLALV----------LALAVLVAYLARLASIGSATQT-------AAALLTREFGHL 223

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 496663605 232 FWGSIVSVIVAAACAFVA-KKKVGASKTLMVVAAIGALATSVMFRVLIYQLGYPVVLMY 289
Cdd:COG3302  224 LALRLVLLALGFVLPLLPlLRGSTAALALLALAFALVLAGELVGRWLFYALAVHVGMLY 282
DmsC pfam04976
DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of ...
 4-189 7.58e-04

DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of Escherichia coli is a heterotrimeric enzyme composed of a membrane extrinsic catalytic dimer (DmsAB) and a membrane intrinsic polytopic anchor subunit (DmsC).


Pssm-ID: 398575  Cd Length: 275  Bit Score: 40.12  E-value: 7.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605    4 QWPLVIFTLFVCLTCGTLGGMSILALKGQGRNLQMTALITSAVSLV---VGGIGAFLHLEHWERIFNGFGHI-TSGITQE 79
Cdd:pfam04976   7 ELPLVIFTVLAQSVVGAFIVFAFVLLFGKNQALRQYVHKSMFVLLAllgIGFIASIMHLGSPLRAFNSLNRVgASMLSNE 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605   80 LI-GCVALAIVIVAWFVVLRGGKPVPKALAW--ATLAVAVLMVVATAHSYLMPARPAW--GLALVAFYLgNACLLGAAAV 154
Cdd:pfam04976  87 IAaGAIFFALAGLYWLVAILGKLPPALGHLWliVTMALGIIFMYMMNMVYHIDTVPTWntGITTWGFYL-TVLLGGPTLG 165

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 496663605  155 WLISVLKKDEavEATGIQLTFIAALVQIVADVVFV 189
Cdd:pfam04976 166 YALLYFARVD--TGTFLFLPFLFVLALTLNAIVII 198
 
Name Accession Description Interval E-value
DmsC COG3302
DMSO reductase anchor subunit DmsC [Energy production and conversion];
1-289 1.15e-21

DMSO reductase anchor subunit DmsC [Energy production and conversion];


Pssm-ID: 442531  Cd Length: 282  Bit Score: 91.87  E-value: 1.15e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605   1 METQWPLVIFTLFVCLTCGTLGGMSILALKG----QGRNLQMTALITSAVSLVVGGIGAFLHLEHWERIFNGFGHI-TSG 75
Cdd:COG3302    1 MHPEWPLVLFTVLSQAGVGLFLALALALLLGllspASRKRLLRALLLALVLLGVGLLASTFHLGHPLRAWRAFSNLrTSW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605  76 ITQELIGCVALAIVIVAWFVVLRGGKP---VPKALAWATLAVAVLMVVATAHSYLMPARPAWGLALV-AFYLGNACLLGA 151
Cdd:COG3302   81 LSREIVAAVLFFALAGLYALLAWLGKLpggLRKLLGLLAALLGLALVFAMAMIYQIKTVPTWNTPLTpLNFLLTALALGA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605 152 AAVWLISVLKKDEAVEATGIQLTFIAALVqivadvvfviACAMAKIAQFGYYADPTSMTTApthvdslMTVMVSGAGAPM 231
Cdd:COG3302  161 LLAALLLALAGVDLRALKALALLALLALV----------LALAVLVAYLARLASIGSATQT-------AAALLTREFGHL 223

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 496663605 232 FWGSIVSVIVAAACAFVA-KKKVGASKTLMVVAAIGALATSVMFRVLIYQLGYPVVLMY 289
Cdd:COG3302  224 LALRLVLLALGFVLPLLPlLRGSTAALALLALAFALVLAGELVGRWLFYALAVHVGMLY 282
DmsC pfam04976
DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of ...
 4-189 7.58e-04

DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of Escherichia coli is a heterotrimeric enzyme composed of a membrane extrinsic catalytic dimer (DmsAB) and a membrane intrinsic polytopic anchor subunit (DmsC).


Pssm-ID: 398575  Cd Length: 275  Bit Score: 40.12  E-value: 7.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605    4 QWPLVIFTLFVCLTCGTLGGMSILALKGQGRNLQMTALITSAVSLV---VGGIGAFLHLEHWERIFNGFGHI-TSGITQE 79
Cdd:pfam04976   7 ELPLVIFTVLAQSVVGAFIVFAFVLLFGKNQALRQYVHKSMFVLLAllgIGFIASIMHLGSPLRAFNSLNRVgASMLSNE 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496663605   80 LI-GCVALAIVIVAWFVVLRGGKPVPKALAW--ATLAVAVLMVVATAHSYLMPARPAW--GLALVAFYLgNACLLGAAAV 154
Cdd:pfam04976  87 IAaGAIFFALAGLYWLVAILGKLPPALGHLWliVTMALGIIFMYMMNMVYHIDTVPTWntGITTWGFYL-TVLLGGPTLG 165

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 496663605  155 WLISVLKKDEavEATGIQLTFIAALVQIVADVVFV 189
Cdd:pfam04976 166 YALLYFARVD--TGTFLFLPFLFVLALTLNAIVII 198
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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