NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|496724196|ref|WP_009353480|]
View 

MULTISPECIES: DUF1659 domain-containing protein [unclassified Veillonella]

Protein Classification

DUF1659 domain-containing protein( domain architecture ID 10545273)

DUF1659 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF1659 pfam07872
Protein of unknown function (DUF1659); This family consists of hypothetical bacterial proteins ...
 7-43 9.32e-03

Protein of unknown function (DUF1659); This family consists of hypothetical bacterial proteins of unknown function.


:

Pssm-ID: 462296  Cd Length: 43  Bit Score: 30.50  E-value: 9.32e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 496724196   7 TKLQLQFKKG---EGAHNLKVANFAYVNESATDEDVKAVG 43
Cdd:pfam07872  3 SSLVLRYQTGldaNGKPVLKTKSFNNVKPDATDQDLYDVA 42
 
Name Accession Description Interval E-value
DUF1659 pfam07872
Protein of unknown function (DUF1659); This family consists of hypothetical bacterial proteins ...
 7-43 9.32e-03

Protein of unknown function (DUF1659); This family consists of hypothetical bacterial proteins of unknown function.


Pssm-ID: 462296  Cd Length: 43  Bit Score: 30.50  E-value: 9.32e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 496724196   7 TKLQLQFKKG---EGAHNLKVANFAYVNESATDEDVKAVG 43
Cdd:pfam07872  3 SSLVLRYQTGldaNGKPVLKTKSFNNVKPDATDQDLYDVA 42
 
Name Accession Description Interval E-value
DUF1659 pfam07872
Protein of unknown function (DUF1659); This family consists of hypothetical bacterial proteins ...
 7-43 9.32e-03

Protein of unknown function (DUF1659); This family consists of hypothetical bacterial proteins of unknown function.


Pssm-ID: 462296  Cd Length: 43  Bit Score: 30.50  E-value: 9.32e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 496724196   7 TKLQLQFKKG---EGAHNLKVANFAYVNESATDEDVKAVG 43
Cdd:pfam07872  3 SSLVLRYQTGldaNGKPVLKTKSFNNVKPDATDQDLYDVA 42
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH