|
Name |
Accession |
Description |
Interval |
E-value |
| KdpD |
COG2205 |
K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; |
222-431 |
4.63e-41 |
|
K+-sensing histidine kinase KdpD [Signal transduction mechanisms];
Pssm-ID: 441807 [Multi-domain] Cd Length: 239 Bit Score: 146.59 E-value: 4.63e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 222 ELRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPF-KDHDTYLKKCKEILQEQSELVHSILEATNLD 300
Cdd:COG2205 1 ELEEALEELEELERLKSEFLANVSHELRTPLTSILGAAELLLDEEDLSpEERRELLEIIRESAERLLRLIEDLLDLSRLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 301 M-ALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQ 377
Cdd:COG2205 81 SgKLSLELEPVDLAELLEEAVEELRPLAEEKGIRLELDLPPelPLVYADPELLEQVLANLLDNAIKYSPPGGTITISARR 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 497596377 378 --NQLIIEnqVE---RVLSDEELDQVFRPFYRPDYSRDKkdGGIGIGLFIVQKILEKHG 431
Cdd:COG2205 161 egDGVRIS--VSdngPGIPEEELERIFERFYRGDNSRGE--GGTGLGLAIVKRIVEAHG 215
|
|
| BaeS |
COG0642 |
Signal transduction histidine kinase [Signal transduction mechanisms]; |
129-431 |
1.99e-38 |
|
Signal transduction histidine kinase [Signal transduction mechanisms];
Pssm-ID: 440407 [Multi-domain] Cd Length: 328 Bit Score: 142.35 E-value: 1.99e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 129 LLFNYGFHSLSDVSQTLVTFYPFILLLIIVLAVSVAFVYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQD 208
Cdd:COG0642 2 LLLLLLLVLLLLLLLLLLLALLLLLLLLLLLALLLLLALLLLLLLLLLLLLLLALALLALLLLLLLLLLLLLLLLLLLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 209 INSLYSKLLSSIDELRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPfkDHDTYLKKCKEILQEQSE 288
Cdd:COG0642 82 LLLLLLLLLLLLLLLLALLLLLEEANEAKSRFLANVSHELRTPLTAIRGYLELLLEELDE--EQREYLETILRSADRLLR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 289 LVHSILEATNLDM-ALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAFRYS 365
Cdd:COG0642 160 LINDLLDLSRLEAgKLELEPEPVDLAELLEEVVELFRPLAEEKGIELELDLPDdlPTVRGDPDRLRQVLLNLLSNAIKYT 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497596377 366 CKEAIIRVVLRQ--NQLIIEnqVE---RVLSDEELDQVFRPFYRPDYSRdkKDGGIGIGLFIVQKILEKHG 431
Cdd:COG0642 240 PEGGTVTVSVRRegDRVRIS--VEdtgPGIPPEDLERIFEPFFRTDPSR--RGGGTGLGLAIVKRIVELHG 306
|
|
| WalK |
COG5002 |
Sensor histidine kinase WalK [Signal transduction mechanisms]; |
117-431 |
1.49e-36 |
|
Sensor histidine kinase WalK [Signal transduction mechanisms];
Pssm-ID: 444026 [Multi-domain] Cd Length: 390 Bit Score: 138.53 E-value: 1.49e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 117 AEITSAEGVTYYLLFNYGFHSLSDVSQTLVTFYPFILLLIIVLAVSVAFVYSRLSTRRIARISETTRRMQSLESGISCAV 196
Cdd:COG5002 48 LLLLLALLLLLLLLLLLLLALLLLLLLLLLLLALALLLLALLLLLLLLLLLLALLILLLLLALLILLAALLLLLSELLLL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 197 AGTDEITILAQDINSLYSKLLSSIDELRTENERAmarEKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKD-HDTY 275
Cdd:COG5002 128 LLLLGRLSLRLSALLLGLLLLAAVERDITELERL---EQMRREFVANVSHELRTPLTSIRGYLELLLDGAADDPEeRREY 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 276 LKKCKEILQEQSELVHSILEATNLDM-ALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELS--PVLIEANPVYFLK 352
Cdd:COG5002 205 LEIILEEAERLSRLVNDLLDLSRLESgELKLEKEPVDLAELLEEVVEELRPLAEEKGIELELDLPedPLLVLGDPDRLEQ 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 353 AIKNILDNAFRYSCKEAIIRVVLRQNqliiENQVE-RV------LSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQK 425
Cdd:COG5002 285 VLTNLLDNAIKYTPEGGTITVSLREE----DDQVRiSVrdtgigIPEEDLPRIFERFYRVDKSRSRETGGTGLGLAIVKH 360
|
....*.
gi 497596377 426 ILEKHG 431
Cdd:COG5002 361 IVEAHG 366
|
|
| cztS_silS_copS |
TIGR01386 |
heavy metal sensor kinase; Members of this family contain a sensor histidine kinase domain ... |
9-431 |
9.19e-21 |
|
heavy metal sensor kinase; Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.
Pssm-ID: 273593 [Multi-domain] Cd Length: 457 Bit Score: 94.38 E-value: 9.19e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 9 IIVAAMISFISVTLLGLLYYAMPIYYNQVKKQELRHDYMTVAKqLDGMPEAKIiSEIDDFDIKTPNIIISLFSSDRKIIY 88
Cdd:TIGR01386 17 ALVFALSGFMLYSSLERHFEERDREELQGKLEQVRRFLRDPAD-LDEDIKRLQ-EKIDDLLVGHSDLALSILNPDGRLLF 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 89 PDPNDEM--AKKHENEYLENGDFDEIGSWGAEITSAEG-------------VTYYLLFNYGFHSLSDVSQTLVTFYPFIL 153
Cdd:TIGR01386 95 ERAQGAAlvPAVAANDALLELDQADAKMTHYRSILRSVaalpggkgrkpvqITVALDINAHTHLLDALRKWLILIAVLLV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 154 LLIIVLAVSVAfvysRLSTRRIARISETTRRM--QSLESGISCAVAGTdEITILAQDINSLYSKLlssidelrtenERAM 231
Cdd:TIGR01386 175 LLTALLGWWIT----RLGLEPLRRLSAVAARIspESLDQRLDPSRAPA-ELRELAQSFNAMLGRL-----------EDAF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 232 AREkekSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDTYLKKCKEILQEQSELVHSIL---EATNLDMALkeSRE 308
Cdd:TIGR01386 239 QRL---SQFSADLAHELRTPLTNLLGQTQVALSQPRTGEEYREVLESNLEELERLSRMVSDMLflaRADNGQLAL--ERV 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 309 QIRLDQLIDSSLTSYQSLAEVKGYQFEVELSPVLiEANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQNQ----LIIEN 384
Cdd:TIGR01386 314 RLDLAAELAKVAEYFEPLAEERGVRIRVEGEGLV-RGDPQMFRRAISNLLSNALRHTPDGGTITVRIERRSdevrVSVSN 392
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 497596377 385 QVERvLSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILEKHG 431
Cdd:TIGR01386 393 PGPG-IPPEHLSRLFDRFYRVDPARSNSGEGTGLGLAIVRSIMEAHG 438
|
|
| PRK10549 |
PRK10549 |
two-component system sensor histidine kinase BaeS; |
151-431 |
7.42e-20 |
|
two-component system sensor histidine kinase BaeS;
Pssm-ID: 182539 [Multi-domain] Cd Length: 466 Bit Score: 91.62 E-value: 7.42e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 151 FILLLIIVLAVSVAFVYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLlssidelrtENERA 230
Cdd:PRK10549 168 LIVALSTLLAALATFLLARGLLAPVKRLVEGTHKLAAGDFTTRVTPTSRDELGRLAQDFNQLASTL---------EKNEQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 231 MARekeksDFLRITSHELKTPIASMLGLVEGMIYNVGPFkdhdtylkkckeilqeQSELVHSIL-EATNL-----DM--- 301
Cdd:PRK10549 239 MRR-----DFMADISHELRTPLAVLRGELEAIQDGVRKF----------------TPESVASLQaEVGTLtklvdDLhql 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 302 ------ALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSP-VLIEANPVYFLKAIKNILDNAFRY--SCKEAIIR 372
Cdd:PRK10549 298 slsdegALAYRKTPVDLVPLLEVAGGAFRERFASRGLTLQLSLPDsATVFGDPDRLMQLFNNLLENSLRYtdSGGSLHIS 377
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 373 VVLRQNQLIIENQ-VERVLSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILEKHG 431
Cdd:PRK10549 378 AEQRDKTLRLTFAdSAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHN 437
|
|
| COG4251 |
COG4251 |
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal ... |
100-431 |
1.79e-17 |
|
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms];
Pssm-ID: 443393 [Multi-domain] Cd Length: 503 Bit Score: 84.84 E-value: 1.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 100 ENEYLENGDFDEIGSWGAEITSAEGVTYYLLFNYGFHSLSDVSQTLVTFYPFILLLIIVLAVSVAFVYSRLSTRRIARIS 179
Cdd:COG4251 148 ALLLLLLLLLLLLLLLLALILALLLAALAELELLLLLLLVLLLLLLLLLLLLLLLLRLLLELLLLLEAELLLSLGGGLGL 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 180 ETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLSSIDELRTENERAmarEKEKSDFLRITSHELKTPIASMLGLV 259
Cdd:COG4251 228 LLLLLLLLVLLLLLILLLLLLILVLELLELRLELEELEEELEERTAELERS---NEELEQFAYVASHDLREPLRKISGFS 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 260 EgMI---YNVGPFKDHDTYLKKCKEILQEQSELVHSILEATNLDmALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEV 336
Cdd:COG4251 305 Q-LLeedYGDKLDEEGREYLERIRDAAERMQALIDDLLAYSRVG-RQELEFEPVDLNELLEEVLEDLEPRIEERGAEIEV 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 337 ELSPVlIEANPVYFLKAIKNILDNAFRYSCKE--AIIRVVLRQNqliiENQVERVLSD-------EELDQVFRPFYRpdY 407
Cdd:COG4251 383 GPLPT-VRGDPTLLRQVFQNLISNAIKYSRPGepPRIEIGAERE----GGEWVFSVRDngigidpEYAEKIFEIFQR--L 455
|
330 340
....*....|....*....|....
gi 497596377 408 SRDKKDGGIGIGLFIVQKILEKHG 431
Cdd:COG4251 456 HSRDEYEGTGIGLAIVKKIVERHG 479
|
|
| PRK09835 |
PRK09835 |
Cu(+)/Ag(+) sensor histidine kinase; |
8-450 |
5.02e-16 |
|
Cu(+)/Ag(+) sensor histidine kinase;
Pssm-ID: 182101 [Multi-domain] Cd Length: 482 Bit Score: 80.20 E-value: 5.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 8 FIIVAAMISFISVTLLglLYYAMPIYYNQVKKQELRHDYMTVAKQLDG--MPEAKIISEIDDFDIKTPNIIISLFSSDRK 85
Cdd:PRK09835 19 FISLATIAAFFAFTWI--MIHSVKVHFAEQDINDLKQISATLERVLNHpdETQARRLMTLEDIVAGYSNVLISLADSHGK 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 86 IIYPDPN----------------------------DEMAKKHENEYLENGDFDEIGSWGAEItsAEGVTYYLLF-----N 132
Cdd:PRK09835 97 TVYHSPGapdlrefvrdaipdkdarggevflwsgpTPMMPGHGHGHMEHSNWRMIALPVGPL--VDGKPIYTLLialsiD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 133 YGFHSLSDVSQTLVTFYPFILLLIIVLaVSVAfVYSrlSTRRIARISettRRMQSLESGISCAVAGTDEITILAQDINSL 212
Cdd:PRK09835 175 FHLHYINDLKNKLIMTASVISLLIVFI-VLLA-VHK--GHAPIRSVS---RQIQNITSKDLDVRLDPQTVPIELEQLVLS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 213 YSKLLSSIDELRTEneramarekeKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDTYLKKCKEILQEQSELVHS 292
Cdd:PRK09835 248 FNHMIERIEDVFTR----------QSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSD 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 293 ILEATNLD-MALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSPVLIEANPVYFLKAIKNILDNAFRYSCKEAII 371
Cdd:PRK09835 318 MLFLAQADnNQLIPEKKMLDLADEVGKVFDFFEAWAEERGVELRFVGDPCQVAGDPLMLRRAISNLLSNALRYTPAGEAI 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 372 RVVLRQN----QLIIENQvERVLSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILEKHGfPYTFYASDTQTMRFM 447
Cdd:PRK09835 398 TVRCQEVdhqvQLVVENP-GTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHK-GTVAVTSDARGTRFV 475
|
...
gi 497596377 448 IHL 450
Cdd:PRK09835 476 ISL 478
|
|
| HATPase_CpxA-like |
cd16949 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
352-431 |
2.04e-15 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CpxA; This family includes the histidine kinase-like ATPase (HATPase) domains of two-component sensor histidine kinase (HKs) similar to Escherichia coli CpxA, HK of the CpxA-CpxR two-component regulatory system (TCS) which may function in acid stress and in cell wall stability. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a CpxA family periplasmic domain.
Pssm-ID: 340425 [Multi-domain] Cd Length: 104 Bit Score: 71.97 E-value: 2.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 352 KAIKNILDNAFRYScKEAI---IRVVLRQNQLIIENQVERVlSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILE 428
Cdd:cd16949 3 RALENVLRNALRYS-PSKIlldISQDGDQWTITITDDGPGV-PEDQLEQIFLPFYRVDSARDRESGGTGLGLAIAERAIE 80
|
...
gi 497596377 429 KHG 431
Cdd:cd16949 81 QHG 83
|
|
| PRK11100 |
PRK11100 |
sensory histidine kinase CreC; Provisional |
147-431 |
6.43e-15 |
|
sensory histidine kinase CreC; Provisional
Pssm-ID: 236846 [Multi-domain] Cd Length: 475 Bit Score: 76.81 E-value: 6.43e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 147 TFYPFI------------LLLIIVLAVSVAFVYsrLSTRRIARIsetTRRMQSLESGISCAVA--GTDEITILAQdinsl 212
Cdd:PRK11100 172 SMAPFIkrserrilwagaLLLGIALLIGAGVVW--WLNRSIRRL---TRYADAVTEGKPVPLPklGSSELRELAQ----- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 213 yskllsSIDELRTENE-RAMArekekSDFLRITSHELKTPIASMLG----LVEGMiynvgpfkDHDTYLKKCKEIlQEQS 287
Cdd:PRK11100 242 ------ALESMRVKLEgKAYV-----EQYVQTLTHELKSPLAAIRGaaelLQEDP--------PPEDRARFTGNI-LTQS 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 288 ELVHSILEaTNLDMALKESR------EQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSPVLIEANPVYFLKAIKNILDNA 361
Cdd:PRK11100 302 ARLQQLID-RLLELARLEQRqelevlEPVALAALLEELVEAREAQAAAKGITLRLRPDDARVLGDPFLLRQALGNLLDNA 380
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 497596377 362 FRYSCKEAIIRVVLRQN----QLIIENQVERVlSDEELDQVFRPFY---RPDySRDKkdgGIGIGLFIVQKILEKHG 431
Cdd:PRK11100 381 IDFSPEGGTITLSAEVDgeqvALSVEDQGPGI-PDYALPRIFERFYslpRPA-NGRK---STGLGLAFVREVARLHG 452
|
|
| NtrY |
COG5000 |
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ... |
216-431 |
8.83e-15 |
|
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];
Pssm-ID: 444024 [Multi-domain] Cd Length: 422 Bit Score: 75.77 E-value: 8.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 216 LLSSIDELRTENERA----MARekeksdflRItSHELKTPIASMLGLVE--GMIYNVGPFKDHDTyLKKCKEILQEQSEL 289
Cdd:COG5000 185 VFDDITELLRAERLAawgeLAR--------RI-AHEIKNPLTPIQLSAErlRRKLADKLEEDRED-LERALDTIIRQVDR 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 290 VHSILEATnLDMA--LKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAFrys 365
Cdd:COG5000 255 LKRIVDEF-LDFArlPEPQLEPVDLNELLREVLALYEPALKEKDIRLELDLDPdlPEVLADRDQLEQVLINLLKNAI--- 330
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 497596377 366 ckEAI-----IRVVLRQNqliiENQVE-RV------LSDEELDQVFRPFYrpdysrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:COG5000 331 --EAIeeggeIEVSTRRE----DGRVRiEVsdngpgIPEEVLERIFEPFF------TTKPKGTGLGLAIVKKIVEEHG 396
|
|
| PRK10337 |
PRK10337 |
sensor protein QseC; Provisional |
150-436 |
5.85e-14 |
|
sensor protein QseC; Provisional
Pssm-ID: 182388 [Multi-domain] Cd Length: 449 Bit Score: 73.53 E-value: 5.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 150 PFILLLIIVLavsvafVYSRLST-RRIARisetTRRMQSLESGISCAVAGT-DEITILAQDINSLYSkllssidelRTEN 227
Cdd:PRK10337 172 PIMLIILMVL------LGRELAPlKKLAL----ALRMRDPDSETPLNATGVpSEVRPLVEALNQLFA---------RTHA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 228 erAMAREKeksdflRITS---HELKTPIASMLGLVEgmiynVGPFKDHDTYLKKcKEILQeqseLVHSILEATNL-DMAL 303
Cdd:PRK10337 233 --MMVRER------RFTSdaaHELRSPLAALKVQTE-----VAQLSDDDPQARK-KALLQ----LHAGIDRATRLvDQLL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 304 KESR----------EQIRLDQLIDSSLTSYQSLAEVKGYQFEVEL--SPVLIEANPVYFLKAIKNILDNAFRYSCKEAII 371
Cdd:PRK10337 295 TLSRldsldnlqdvAEIPLEDLLQSAVMDIYHTAQQAGIDVRLTLnaHPVIRTGQPLLLSLLVRNLLDNAIRYSPQGSVV 374
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497596377 372 RVVLRQNQLIIENQVERVlSDEELDQVFRPFYRPDySRDKKdgGIGIGLFIVQKILEKHGFPYTF 436
Cdd:PRK10337 375 DVTLNARNFTVRDNGPGV-TPEALARIGERFYRPP-GQEAT--GSGLGLSIVRRIAKLHGMNVSF 435
|
|
| cpxA |
PRK09470 |
envelope stress sensor histidine kinase CpxA; |
245-430 |
6.24e-14 |
|
envelope stress sensor histidine kinase CpxA;
Pssm-ID: 236532 [Multi-domain] Cd Length: 461 Bit Score: 73.43 E-value: 6.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 245 SHELKTPIASMLGLVEGMIYNVGpfkdhdtylkkckeilqEQSELVHSILEATNLD-----------MALK--ESREQIR 311
Cdd:PRK09470 251 SHELRTPLTRLQLATALLRRRQG-----------------ESKELERIETEAQRLDsmindllvlsrNQQKnhLERETFK 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 312 LDQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQNQLIIenqveRV 389
Cdd:PRK09470 314 ANSLWSEVLEDAKFEAEQMGKSLTVSAPPgpWPINGNPNALASALENIVRNALRYSHTKIEVAFSVDKDGLTI-----TV 388
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 497596377 390 ------LSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILEKH 430
Cdd:PRK09470 389 dddgpgVPEEEREQIFRPFYRVDEARDRESGGTGLGLAIVENAIQQH 435
|
|
| HATPase |
cd00075 |
Histidine kinase-like ATPase domain; This superfamily includes the histidine kinase-like ... |
353-431 |
1.30e-13 |
|
Histidine kinase-like ATPase domain; This superfamily includes the histidine kinase-like ATPase (HATPase) domains of several ATP-binding proteins such as histidine kinase, DNA gyrase B, topoisomerases, heat shock protein 90 (HSP90), phytochrome-like ATPases and DNA mismatch repair proteins. Domains belonging to this superfamily are also referred to as GHKL (gyrase, heat-shock protein 90, histidine kinase, MutL) ATPase domains.
Pssm-ID: 340391 [Multi-domain] Cd Length: 102 Bit Score: 66.47 E-value: 1.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 353 AIKNILDNAFRYSCKEAIIRVVLRQN----QLIIENQvERVLSDEELDQVFRPFYRPDYSRdkKDGGIGIGLFIVQKILE 428
Cdd:cd00075 4 VLSNLLDNALKYSPPGGTIEISLRQEgdgvVLEVEDN-GPGIPEEDLERIFERFYRGDKSR--EGGGTGLGLAIVRRIVE 80
|
...
gi 497596377 429 KHG 431
Cdd:cd00075 81 AHG 83
|
|
| COG4191 |
COG4191 |
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal ... |
145-431 |
1.31e-13 |
|
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms];
Pssm-ID: 443345 [Multi-domain] Cd Length: 361 Bit Score: 71.75 E-value: 1.31e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 145 LVTFYPFILLLIIVLAVSVAFVYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLSSIDEL- 223
Cdd:COG4191 41 ALLLALLALLLLLLLLLLLLLLELLLLLLALLGGLLRLLLLLGLLLLLLLEALLLLLLAALDAEENAELEELERDITELe 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 224 RTENERAMAREK----EKsdfL----RITS---HELKTPIASMLGLVEGMIYNVGPFKDHDT---YLKKCKEILQEQSEL 289
Cdd:COG4191 121 RAEEELRELQEQlvqsEK---LaalgELAAgiaHEINNPLAAILGNAELLRRRLEDEPDPEElreALERILEGAERAAEI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 290 VHSILEATNLDmalKESREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAfRYSCK 367
Cdd:COG4191 198 VRSLRAFSRRD---EEEREPVDLNELIDEALELLRPRLKARGIEVELDLPPdlPPVLGDPGQLEQVLLNLLINA-IDAME 273
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 497596377 368 EA---IIRVVLRQNqliiENQVE-RV------LSDEELDQVFRPFY--RPdysrdkKDGGIGIGLFIVQKILEKHG 431
Cdd:COG4191 274 EGeggRITISTRRE----GDYVViSVrdngpgIPPEVLERIFEPFFttKP------VGKGTGLGLSISYGIVEKHG 339
|
|
| HATPase_c |
smart00387 |
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases. |
345-431 |
2.25e-12 |
|
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Pssm-ID: 214643 [Multi-domain] Cd Length: 111 Bit Score: 63.44 E-value: 2.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 345 ANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQ--NQLIIEnqVE---RVLSDEELDQVFRPFYRPDYSRDKKdGGIGIG 419
Cdd:smart00387 1 GDPDRLRQVLSNLLDNAIKYTPEGGRITVTLERdgDHVEIT--VEdngPGIPPEDLEKIFEPFFRTDKRSRKI-GGTGLG 77
|
90
....*....|..
gi 497596377 420 LFIVQKILEKHG 431
Cdd:smart00387 78 LSIVKKLVELHG 89
|
|
| HATPase_BasS-like |
cd16940 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
353-451 |
4.02e-12 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BasS HK of the BasS-BasR two-component regulatory system (TCS). Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some contain a HAMP sensory domain, while some an N-terminal two-component sensor kinase domain.
Pssm-ID: 340417 [Multi-domain] Cd Length: 113 Bit Score: 62.81 E-value: 4.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 353 AIKNILDNAFRYSCKEAIIRVVLRQN---QLIIENQVERVlSDEELDQVFRPFYRPDYSRDKkdgGIGIGLFIVQKILEK 429
Cdd:cd16940 17 LLRNLVDNAVRYSPQGSRVEIKLSADdgaVIRVEDNGPGI-DEEELEALFERFYRSDGQNYG---GSGLGLSIVKRIVEL 92
|
90 100
....*....|....*....|..
gi 497596377 430 HGFPYTFyaSDTQTMRFMIHLQ 451
Cdd:cd16940 93 HGGQIFL--GNAQGGGLEAWVR 112
|
|
| HATPase_c |
pfam02518 |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ... |
353-450 |
4.05e-11 |
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.
Pssm-ID: 460579 [Multi-domain] Cd Length: 109 Bit Score: 59.69 E-value: 4.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 353 AIKNILDNAFRYSCKEAIIRVVLRQ-NQLIIEnqVE---RVLSDEELDQVFRPFYRPDysrDKKDGGIGIGLFIVQKILE 428
Cdd:pfam02518 9 VLSNLLDNALKHAAKAGEITVTLSEgGELTLT--VEdngIGIPPEDLPRIFEPFSTAD---KRGGGGTGLGLSIVRKLVE 83
|
90 100
....*....|....*....|..
gi 497596377 429 KHGFPYTFYASDTQTMRFMIHL 450
Cdd:pfam02518 84 LLGGTITVESEPGGGTTVTLTL 105
|
|
| HATPase_RstB-like |
cd16939 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
352-431 |
5.57e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Salmonella typhimurium RstB; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Salmonella typhimurium RstB HK of the RstA-RstB two-component regulatory system (TCS), which regulates expression of the constituents participating in pyrimidine metabolism and iron acquisition, and may be required for regulation of Salmonella motility and invasion. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensor domain.
Pssm-ID: 340416 [Multi-domain] Cd Length: 104 Bit Score: 59.37 E-value: 5.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 352 KAIKNILDNAFRYSCKEAIIRVVLRQNQLIIenQVERV---LSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILE 428
Cdd:cd16939 3 RALDNLLRNALRYAHRTVRIALLVSGGRLTL--IVEDDgpgIPAAARERVFEPFVRLDPSRDRATGGFGLGLAIVHRVAL 80
|
...
gi 497596377 429 KHG 431
Cdd:cd16939 81 WHG 83
|
|
| HATPase_EnvZ-like |
cd16950 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
352-431 |
3.37e-10 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli EnvZ and Pseudomonas aeruginosa BfmS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli EnvZ of the EnvZ-OmpR two-component regulatory system (TCS), which functions in osmoregulation. It also contains the HATPase domain of Pseudomonas aeruginosa BfmS, the HK of the BfmSR TCS, which functions in the regulation of the rhl quorum-sensing system and bacterial virulence in P. aeruginosa. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a periplasmic domain.
Pssm-ID: 340426 [Multi-domain] Cd Length: 101 Bit Score: 57.07 E-value: 3.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 352 KAIKNILDNAFRYSCKEaiIRVVLRQNQLIIENQVE---RVLSDEELDQVFRPFYRPDYSRDKkdGGIGIGLFIVQKILE 428
Cdd:cd16950 3 RVLSNLVDNALRYGGGW--VEVSSDGEGNRTRIQVLdngPGIAPEEVDELFQPFYRGDNARGT--SGTGLGLAIVQRISD 78
|
...
gi 497596377 429 KHG 431
Cdd:cd16950 79 AHG 81
|
|
| HATPase_BaeS-like |
cd16946 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
350-431 |
3.69e-10 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BaeS HK of the BaeS/BaeR two-component regulatory system (TCS), which responds to envelope stress. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensory domain.
Pssm-ID: 340422 [Multi-domain] Cd Length: 109 Bit Score: 57.09 E-value: 3.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 350 FLKAIKNILDNAFRYSCKEAIIRVVLRQN----QLIIENQVERVlSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQK 425
Cdd:cd16946 5 LQQLFVNLLENSLRYTDTGGKLRIRAAQTpqevRLDVEDSAPGV-SDDQLARLFERFYRVESSRNRASGGSGLGLAICHN 83
|
....*.
gi 497596377 426 ILEKHG 431
Cdd:cd16946 84 IALAHG 89
|
|
| ArsS_fam_HK |
NF038389 |
ArsS family sensor histidine kinase; ArsS in Helicobacter pylori is a sensor histidine kinase ... |
145-432 |
5.85e-10 |
|
ArsS family sensor histidine kinase; ArsS in Helicobacter pylori is a sensor histidine kinase participating in a two-component system that controls the response to acid conditiions encountered during the process of gastric colonization. This HMM identified ArsS itself but also a broader collection of apparent orthologs from closely related non-gastric colonizers such as Helicobacter hepaticus, Campylobacter jejuni and Wolinella succinogenes. See BlastRule NBR014349 for specific identification of ArsS itself, distinguished by a signature His residue that becomes protonated at low pH.
Pssm-ID: 468500 [Multi-domain] Cd Length: 402 Bit Score: 61.01 E-value: 5.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 145 LVTFYPFILLLIIVLAVSVAfvysrlstRRIARISETTRRMQSLESGISCA---VAGTDEITILAQDINSLYSKllssID 221
Cdd:NF038389 133 IIVFFIFLILLLLILYISVL--------KSLKPLKKLKKQIKKFANGDFDFiksESNGDEIGEVANEFDKAVKK----IK 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 222 ELrteNE-RAMarekeksdFLRITSHELKTPIASmlglveGMIYNvgpfkdhdtylkkckEILQE--QSELVHSILEatN 298
Cdd:NF038389 201 AL---NEsRQL--------FLRNIMHELKTPITK------GRIVA---------------EMLEDekQKERLISIFE--R 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 299 LDMALKE--SREQI------------RLDQLIDSSLTSyqSLAEVKGYQFEVELSPVLIEANPVYFLKAIKNILDNAFRY 364
Cdd:NF038389 247 LESLINEfaKIEQLtsknyklnkkeyRLSDIIDEAIDM--LMIDDSSVIIKVSLEDFKLNVDFELFSLAIKNLIDNAIKY 324
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 497596377 365 SC-KEAIIRVvlRQNQLIIENQVERVlsDEELDQVFRPFYRpdySRDKKDGGIGIGLFIVQKILEKHGF 432
Cdd:NF038389 325 SPdKKVTIEI--KGDKIEFKNKGEPL--EEPLEYYFEPFFK---GNEKSKSGFGLGLYIVKNILKAHGF 386
|
|
| HATPase_SpaK_NisK-like |
cd16975 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
351-431 |
7.22e-10 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis SpaK and Lactococcus lactis NisK; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Bacillus subtilis SpaK and Lactococcus lactis NisK. SpaK is the histidine kinase (HK) of the SpaK-SpaR two-component regulatory system (TCS), which is involved in the regulation of the biosynthesis of lantibiotic subtilin. NisK is the HK of the NisK-NisR TCS, which is involved in the regulation of the biosynthesis of lantibiotic nisin. SpaK and NisK may function as membrane-associated protein kinases that phosphorylate SpaR and NisR, respectively, in response to environmental signals.
Pssm-ID: 340434 [Multi-domain] Cd Length: 107 Bit Score: 56.32 E-value: 7.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 351 LKAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVE---RVLSDEELDQVFRPFYRPDYSRDKKdGGIGIGLFIVQKIL 427
Cdd:cd16975 6 SRALINIISNACQYAPEGGTVSISIYDEEEYLYFEIWdngHGFSEQDLKKALELFYRDDTSRRSG-GHYGMGLYIAKNLV 84
|
....
gi 497596377 428 EKHG 431
Cdd:cd16975 85 EKHG 88
|
|
| PRK10604 |
PRK10604 |
sensor protein RstB; Provisional |
332-431 |
1.81e-09 |
|
sensor protein RstB; Provisional
Pssm-ID: 236724 [Multi-domain] Cd Length: 433 Bit Score: 59.62 E-value: 1.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 332 YQFEVELSPV--LIEANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQNQ--LIIENQVERVLSDEElDQVFRPFYRPDY 407
Cdd:PRK10604 300 KTVRLDTPHQgdYGALDMRLMERVLDNLLNNALRYAHSRVRVSLLLDGNQacLIVEDDGPGIPPEER-ERVFEPFVRLDP 378
|
90 100
....*....|....*....|....
gi 497596377 408 SRDKKDGGIGIGLFIVQKILEKHG 431
Cdd:PRK10604 379 SRDRATGGCGLGLAIVHSIALAMG 402
|
|
| envZ |
PRK09467 |
osmolarity sensor protein; Provisional |
304-431 |
2.81e-09 |
|
osmolarity sensor protein; Provisional
Pssm-ID: 236531 [Multi-domain] Cd Length: 435 Bit Score: 58.77 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 304 KESREQIRLDQLIDssltsyQSLAEVKGYQFEVEL----SPVLIEANPVYFLKAIKNILDNAFRYSCKEaiIRVVLRQNQ 379
Cdd:PRK09467 288 EMPMEMADLNALLG------EVIAAESGYEREIETalqpGPIEVPMNPIAIKRALANLVVNAARYGNGW--IKVSSGTEG 359
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 497596377 380 LIIENQVERV---LSDEELDQVFRPFYRPDYSRDKKdgGIGIGLFIVQKILEKHG 431
Cdd:PRK09467 360 KRAWFQVEDDgpgIPPEQLKHLFQPFTRGDSARGSS--GTGLGLAIVKRIVDQHN 412
|
|
| CitA |
COG3290 |
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction ... |
217-450 |
4.51e-09 |
|
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms];
Pssm-ID: 442519 [Multi-domain] Cd Length: 389 Bit Score: 57.94 E-value: 4.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 217 LSSIDELRTENERaMAREKEKSDFLRITSHELKTPIASMLGLVEgmiynvgpFKDHD---TYLKkckEILQEQSELVHSI 293
Cdd:COG3290 170 FRDRTELERLEEE-LEGVKELAEALRAQRHDFRNHLHTISGLLQ--------LGEYDealEYID---EISEELQELIDSL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 294 LEATNldmalkesreqirlDQLIDSSLTSYQSLAEVKGYQFEVELSPVL--IEANPVYFLKAIKNILDNAFRYSCK---- 367
Cdd:COG3290 238 LSRIG--------------NPVLAALLLGKAARARERGIDLTIDIDSDLpdLPLSDTDLVTILGNLLDNAIEAVEKlpee 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 368 EAIIRVVLRQ--NQLIIEnqVE---RVLSDEELDQVFRPfyrpDYSrDKKDGGIGIGLFIVQKILEKHGFPYTFYASDTQ 442
Cdd:COG3290 304 ERRVELSIRDdgDELVIE--VEdsgPGIPEELLEKIFER----GFS-TKLGEGRGLGLALVKQIVEKYGGTIEVESEEGE 376
|
....*...
gi 497596377 443 TMRFMIHL 450
Cdd:COG3290 377 GTVFTVRL 384
|
|
| PRK15347 |
PRK15347 |
two component system sensor kinase; |
150-422 |
7.62e-09 |
|
two component system sensor kinase;
Pssm-ID: 237951 [Multi-domain] Cd Length: 921 Bit Score: 58.11 E-value: 7.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 150 PFILLLIIVLAVSVAFVYSRLSTRRIARISE--TTRRMQSLESGIscAVAGTDEITILAQDINSLYSKLLSSIDEL---- 223
Cdd:PRK15347 300 PFALLILVLLTSVLFLLLRRYLAKPLWRFVDiiNKTGPAALEPRL--PENRLDELGSIAKAYNQLLDTLNEQYDTLenkv 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 224 --RT--------ENERAMARekeKSDFLRITSHELKTPIASMLGLVEgmiynvgpfkdhdtyLKKCKEILQEQSEL---- 289
Cdd:PRK15347 378 aeRTqalaeakqRAEQANKR---KSEHLTTISHEIRTPLNGVLGALE---------------LLQNTPLTAEQMDLadta 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 290 ---VHSILEATN--LDMALKES------REQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSPVLieanPVYF-LKAIK-- 355
Cdd:PRK15347 440 rqcTLSLLAIINnlLDFSRIESgqmtlsLEETALLPLLDQAMLTIQGPAQSKSLTLRTFVGAHV----PLYLhLDSLRlr 515
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497596377 356 ----NILDNAFRYSCKEAI-IRVVLRQNQLIIenQVERV---LSDEELDQVFRPFYRPDYSRdkkdGGIGIGLFI 422
Cdd:PRK15347 516 qilvNLLGNAVKFTETGGIrLRVKRHEQQLCF--TVEDTgcgIDIQQQQQIFTPFYQADTHS----QGTGLGLTI 584
|
|
| NtrB |
COG3852 |
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; |
246-431 |
7.01e-08 |
|
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];
Pssm-ID: 443061 [Multi-domain] Cd Length: 361 Bit Score: 54.08 E-value: 7.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 246 HELKTPIASMLGLVEGMIYNVGPFKDHDtYLkkckEILQEQSE----LVHSILEATNLDMAlkeSREQIRLDQLIDSSLT 321
Cdd:COG3852 144 HEIRNPLTGIRGAAQLLERELPDDELRE-YT----QLIIEEADrlnnLVDRLLSFSRPRPP---EREPVNLHEVLERVLE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 322 SYQSLAEvKGYQFEVELSPVL--IEANPVYFLKAIKNILDNAFrysckEAI-----IRVVLRQNQLIIENQVERVL---- 390
Cdd:COG3852 216 LLRAEAP-KNIRIVRDYDPSLpeVLGDPDQLIQVLLNLVRNAA-----EAMpeggtITIRTRVERQVTLGGLRPRLyvri 289
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 497596377 391 ---------SDEELDQVFRPFYRPdysrdkKDGGIGIGLFIVQKILEKHG 431
Cdd:COG3852 290 evidngpgiPEEILDRIFEPFFTT------KEKGTGLGLAIVQKIVEQHG 333
|
|
| PRK09959 |
PRK09959 |
acid-sensing system histidine kinase EvgS; |
220-428 |
7.65e-08 |
|
acid-sensing system histidine kinase EvgS;
Pssm-ID: 182169 [Multi-domain] Cd Length: 1197 Bit Score: 55.13 E-value: 7.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 220 IDELRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVEgMIYNVGPFKDHDT-YLKKCKEILQEQSELVHSILEATN 298
Cdd:PRK09959 695 IHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLE-LLSGSGLSKEQRVeAISLAYATGQSLLGLIGEILDVDK 773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 299 LDMALKESREQ-IRLDQLIDSSLTSYQSLAEVKGYQFEVELS---PVLIEANPVYFLKAIKNILDNAFRYSCKEAI---- 370
Cdd:PRK09959 774 IESGNYQLQPQwVDIPTLVQNTCHSFGAIAASKSIALSCSSTfpdHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVkitt 853
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497596377 371 IRVVLRQNQLIIENQVERV---LSDEELDQVFRPFYRPDYSRDKKdgGIGIGLFIVQKILE 428
Cdd:PRK09959 854 SLGHIDDNHAVIKMTIMDSgsgLSQEEQQQLFKRYSQTSAGRQQT--GSGLGLMICKELIK 912
|
|
| PRK10490 |
PRK10490 |
sensor protein KdpD; Provisional |
224-431 |
8.51e-08 |
|
sensor protein KdpD; Provisional
Pssm-ID: 236701 [Multi-domain] Cd Length: 895 Bit Score: 54.66 E-value: 8.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 224 RTENER-AMAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGpfKDHDTYLKKCKEILQE---QSELVHSIleatnL 299
Cdd:PRK10490 650 SEEQARlASEREQLRNALLAALSHDLRTPLTVLFGQAEILTLDLA--SEGSPHARQASEIRQQvlnTTRLVNNL-----L 722
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 300 DMALKES------REQIRLDQLIDSSLTSYQSLaeVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAFRYSCKEAI- 370
Cdd:PRK10490 723 DMARIQSggfnlrKEWLTLEEVVGSALQMLEPG--LSGHPINLSLPEplTLIHVDGPLFERVLINLLENAVKYAGAQAEi 800
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 497596377 371 -IRVVLRQNQLIIENQVE-RVLSDEELDQVFRPFyrpdySRDKKDG---GIGIGLFIVQKILEKHG 431
Cdd:PRK10490 801 gIDAHVEGERLQLDVWDNgPGIPPGQEQLIFDKF-----ARGNKESaipGVGLGLAICRAIVEVHG 861
|
|
| HATPase_PhoQ-like |
cd16954 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
312-431 |
9.61e-08 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.
Pssm-ID: 340430 [Multi-domain] Cd Length: 135 Bit Score: 50.71 E-value: 9.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 312 LDQLIDSSLTSYQSlaevKGYQFEVELSP---VLIEANPvyFLKAIKNILDNAFRYSCKEaiIRVVLRQNQ----LIIEN 384
Cdd:cd16954 3 LDSLCSALNKVYQR----KGVSISLDISPelrFPGERND--LMELLGNLLDNACKWCLEF--VEVTARQTDgglhLIVDD 74
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 497596377 385 QVERVlSDEELDQVFRPFYRPDYSRDkkdgGIGIGLFIVQKILEKHG 431
Cdd:cd16954 75 DGPGV-PESQRSKIFQRGQRLDEQRP----GQGLGLAIAKEIVEQYG 116
|
|
| HisKA |
cd00082 |
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed ... |
234-295 |
2.22e-07 |
|
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-autophosphorylation by the catalytic domain of the histidine kinase. They subsequently transfer the phosphoryl group to the Asp acceptor residue of a response regulator protein. Two-component signalling systems, consisting of a histidine protein kinase that senses a signal input and a response regulator that mediates the output, are ancient and evolutionarily conserved signaling mechanisms in prokaryotes and eukaryotes.
Pssm-ID: 119399 [Multi-domain] Cd Length: 65 Bit Score: 47.59 E-value: 2.22e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 497596377 234 EKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDTYLKKCKEILQEQSELVHSILE 295
Cdd:cd00082 1 LQAKGEFLANVSHELRTPLTAIRGALELLEEELLDDEEQREYLERIREEAERLLRLINDLLD 62
|
|
| HAMP |
COG2770 |
HAMP domain [Signal transduction mechanisms]; |
9-431 |
3.33e-07 |
|
HAMP domain [Signal transduction mechanisms];
Pssm-ID: 442051 [Multi-domain] Cd Length: 631 Bit Score: 52.81 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 9 IIVAAMISFISVTLLGLLYYAMPIYYNQVKKQELRHDYMTVAKQLDGMPEAKIISEIDDFDIKTPNIIISLFSSDRKIIY 88
Cdd:COG2770 74 ALLLLLLLLSLVALAALLLALLLLLLLALLLLLAALLLLLLLAALALLLLLLLLLAALLALLLALALLALLLGLAAARLL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 89 PDPNDEMAKKHENEYLENGDFDEIGSWGAEITSAEGVTYYLLFNYGFHSLSDVSQTLVTFYPFILLLIIVLAVSVAFVYS 168
Cdd:COG2770 154 LAALLALAAALALALGAGELLLLADLAAAIAALLAALLLLLLGGLLLVVLLEAALAALLLLLLLALLALLLALLLALLLA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 169 RLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLSSIDELRTENERAMAREKEKSDFLRITSHEL 248
Cdd:COG2770 234 RRITRPLRRLAEAARRIAAGDLDVRIPVSRKDEIGELARAFNRMADSLRESIEEAEEEEELAEAELARLLEALLELLLAL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 249 KTPIASMLGLVEGMIYNVGPFKDHDTYLKKCKEILQEQSELVHSILEATNLDMALKESREQIRLDQLIDSSLTSYQSLAE 328
Cdd:COG2770 314 LLLLLALLLLAAAALLLELLLLLLLALLLLLLLAADLLLALALAALLLLLALELLLEAELLVLLALEALALEAELAAVLA 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 329 VKGYQFEVELSPVLIEANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVERVLSDEELDQVFRPFYRPDYS 408
Cdd:COG2770 394 LLAALAAALLLLELALEELVLALLALALLALAAAAAAAEAAAAALELAAAAIAAAAAAEAEGGLAELEAEELVAAAEALL 473
|
410 420
....*....|....*....|...
gi 497596377 409 RDKKDGGIGIGLFIVQKILEKHG 431
Cdd:COG2770 474 LLAALLLLAALGALELLLLEEEE 496
|
|
| HATPase_VanS-like |
cd16923 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
352-431 |
5.46e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Enterococcus faecium VanS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Enterococcus faecium VanS HK of the VanS-VanR two-component regulatory system (TCS) which activates the transcription of vanH, vanA and vanX vancomycin resistance genes. It also contains Ecoli YedV and PcoS, probable members of YedW-YedV TCS and PcoS-PcoR TCS, repectively. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); most also have a HAMP sensor domain.
Pssm-ID: 340400 [Multi-domain] Cd Length: 102 Bit Score: 47.77 E-value: 5.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 352 KAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVERVLS---DEELDQVFRPFYRPDYSRDKkdGGIGIGLFIVQKILE 428
Cdd:cd16923 3 RVFSNLLSNAIKYSPENTRIYITSFLTDDVVNIMFKNPSShplDFKLEKLFERFYRGDNSRNT--EGAGLGLSIAKAIIE 80
|
...
gi 497596377 429 KHG 431
Cdd:cd16923 81 LHG 83
|
|
| PRK10755 |
PRK10755 |
two-component system sensor histidine kinase PmrB; |
199-430 |
1.16e-06 |
|
two-component system sensor histidine kinase PmrB;
Pssm-ID: 236751 [Multi-domain] Cd Length: 356 Bit Score: 50.35 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 199 TDEITILAQDINSLYSKLLSSIDelrteNERAMArekekSDflriTSHELKTPIASM---LGLVEgmiynvgpfKDHDTy 275
Cdd:PRK10755 113 TLEIEAVTSALNQLVSRLTSTLD-----QERLFT-----AD----VAHELRTPLAGIrlhLELLE---------KQHHI- 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 276 lkKCKEILQEQSELVHSILEATNLDMALKE----SREQIRL-DQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPV 348
Cdd:PRK10755 169 --DVAPLIARLDQMMHTVEQLLQLARAGQSfssgHYQTVKLlEDVILPSQDELSEMLEQRQQTLLLPESAadITVQGDAT 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 349 YFLKAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVErvlsDE----------ELDQVFRPFyrpdysrDKKDGGIGI 418
Cdd:PRK10755 247 LLRLLLRNLVENAHRYSPEGSTITIKLSQEDGGAVLAVE----DEgpgideskcgELSKAFVRM-------DSRYGGIGL 315
|
250
....*....|..
gi 497596377 419 GLFIVQKILEKH 430
Cdd:PRK10755 316 GLSIVSRITQLH 327
|
|
| PRK09303 |
PRK09303 |
histidine kinase; |
223-431 |
1.44e-06 |
|
histidine kinase;
Pssm-ID: 236462 [Multi-domain] Cd Length: 380 Bit Score: 50.33 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 223 LRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVE----GMIYNVGPFKDHDT--YLKKCKEILQEQSELVHSILEA 296
Cdd:PRK09303 137 LRQENETLLEQLKFKDRVLAMLAHDLRTPLTAASLALEtlelGQIDEDTELKPALIeqLQDQARRQLEEIERLITDLLEV 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 297 -TNLDMALKESREQIRLDQLIDSSLTSYQSLAEVKGYQFE----VELSPVLieANPVYFLKAIKNILDNAFRYSCKEAII 371
Cdd:PRK09303 217 gRTRWEALRFNPQKLDLGSLCQEVILELEKRWLAKSLEIQtdipSDLPSVY--ADQERIRQVLLNLLDNAIKYTPEGGTI 294
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 497596377 372 RVVL--RQNQliienQVERVLSD-------EELDQVFRPFYRpdYSRDKKDGGIGIGLFIVQKILEKHG 431
Cdd:PRK09303 295 TLSMlhRTTQ-----KVQVSICDtgpgipeEEQERIFEDRVR--LPRDEGTEGYGIGLSVCRRIVRVHY 356
|
|
| phoR |
PRK11006 |
phosphate regulon sensor histidine kinase PhoR; |
222-430 |
3.19e-06 |
|
phosphate regulon sensor histidine kinase PhoR;
Pssm-ID: 182895 [Multi-domain] Cd Length: 430 Bit Score: 49.24 E-value: 3.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 222 ELR----TENERAM-AR--------EKEKSDFLRITSHELKTPIASMLGLVEGMIYN--VGPFKDhdtylkKCKEILQEQ 286
Cdd:PRK11006 176 EIRvmpyTEGQLLMvARdvtqmhqlEGARRNFFANVSHELRTPLTVLQGYLEMMQDQplEGALRE------KALHTMREQ 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 287 SE----LVHSILEATNLdmalkESREQIRLDQLIDSSLT------SYQSLAEVKgYQFEVELSPVL-IEANPVYFLKAIK 355
Cdd:PRK11006 250 TQrmegLVKQLLTLSKI-----EAAPTIDLNEKVDVPMMlrvlerEAQTLSQGK-HTITFEVDNSLkVFGNEDQLRSAIS 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 497596377 356 NILDNAFRYSCKEAIIRVVLRQNQLIIENQVERV---LSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILEKH 430
Cdd:PRK11006 324 NLVYNAVNHTPEGTHITVRWQRVPQGAEFSVEDNgpgIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHALSHH 401
|
|
| HATPase_YcbM-like |
cd16947 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
334-431 |
3.61e-06 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis YcbM; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis YcbM, a HK of the two-component system YcbM-YcbL. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA).
Pssm-ID: 340423 [Multi-domain] Cd Length: 125 Bit Score: 45.97 E-value: 3.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 334 FEVELSpvlIEANPVYFL-------KAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVE---RVLSDEELDQVFRPFY 403
Cdd:cd16947 1 FQVEIN---IPDRPIYANantealqRILKNLISNAIKYGSDGKFLGMTLREDEKHVYIDIWdkgKGISETEKDHVFERLY 77
|
90 100
....*....|....*....|....*...
gi 497596377 404 RPDYSRDKKDGGIGIGLFIVQKILEKHG 431
Cdd:cd16947 78 TLEDSRNSAKQGNGLGLTITKRLAESMG 105
|
|
| HATPase_CreC-like |
cd16945 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
346-431 |
4.10e-06 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CreC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli CreC of the CreC-CreB two-component regulatory system (TCS) involved in catabolic regulation. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and accessory sensory domain(s) such as HAMP, CACHE or PAS.
Pssm-ID: 340421 [Multi-domain] Cd Length: 106 Bit Score: 45.53 E-value: 4.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 346 NPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQN----QLIIENQVERVlSDEELDQVFRPFY---RPDYSRDKKdggiGI 418
Cdd:cd16945 1 DPFLLRQAINNLLDNAIDFSPEGGLIALQLEADtegiELLVFDEGSGI-PDYALNRVFERFYslpRPHSGQKST----GL 75
|
90
....*....|...
gi 497596377 419 GLFIVQKILEKHG 431
Cdd:cd16945 76 GLAFVQEVAQLHG 88
|
|
| PRK11466 |
PRK11466 |
hybrid sensory histidine kinase TorS; Provisional |
205-431 |
4.64e-06 |
|
hybrid sensory histidine kinase TorS; Provisional
Pssm-ID: 236914 [Multi-domain] Cd Length: 914 Bit Score: 49.13 E-value: 4.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 205 LAQDINSLYSKLLSSIDELRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNvgpfkdhdTYLKKCKEILQ 284
Cdd:PRK11466 412 LAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADN--------PALNAQRDDLR 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 285 EQSELVHSILEATN--LDMALKE--------SREQIRLDQLIDSSLTSYQSLAEVKGYQFEVELS---PVLIEANPVYFL 351
Cdd:PRK11466 484 AITDSGESLLTILNdiLDYSAIEaggknvsvSDEPFEPRPLLESTLQLMSGRVKGRPIRLATDIAddlPTALMGDPRRIR 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 352 KAIKNILDNAFRYSCKEAII-RVVLRQNQLIIENQVERVLSDE-ELDQVFRPFYRPDYSRdkkdGGIGIGLFIVQKILEK 429
Cdd:PRK11466 564 QVITNLLSNALRFTDEGSIVlRSRTDGEQWLVEVEDSGCGIDPaKLAEIFQPFVQVSGKR----GGTGLGLTISSRLAQA 639
|
..
gi 497596377 430 HG 431
Cdd:PRK11466 640 MG 641
|
|
| HisKA |
smart00388 |
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine ... |
236-300 |
1.35e-05 |
|
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine kinases.
Pssm-ID: 214644 [Multi-domain] Cd Length: 66 Bit Score: 42.55 E-value: 1.35e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497596377 236 EKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDtYLKKCKEILQEQSELVHSILEATNLD 300
Cdd:smart00388 1 AKREFLANLSHELRTPLTAIRGYLELLLDTELSEEQRE-YLETILREAERLLRLINDLLDLSRIE 64
|
|
| NarQ |
COG3850 |
Signal transduction histidine kinase NarQ, nitrate/nitrite-specific [Signal transduction ... |
151-317 |
1.46e-05 |
|
Signal transduction histidine kinase NarQ, nitrate/nitrite-specific [Signal transduction mechanisms];
Pssm-ID: 443059 [Multi-domain] Cd Length: 448 Bit Score: 47.19 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 151 FILLLIIVLAVSVAFVYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLSSIDELRTENERA 230
Cdd:COG3850 122 LRLLLALLLALLLAYLLRRRIVRPLRRLTQAAERIARGDFDARVPVSGRDELGTLARAFNRMADELQELYAELEEEEELE 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 231 MAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDTYLKKCKEILQEQSELVHSILEATNLDMALKESREQI 310
Cdd:COG3850 202 AELELLALLDELLLLAALLLLLALLLALLLAALLAALLLLLLLQDALAESELLALNILAGLLELLLALLLLLLASALLLL 281
|
....*..
gi 497596377 311 RLDQLID 317
Cdd:COG3850 282 ELELLAL 288
|
|
| HisKA |
pfam00512 |
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine ... |
236-300 |
1.52e-05 |
|
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine kinases.
Pssm-ID: 459839 [Multi-domain] Cd Length: 66 Bit Score: 42.58 E-value: 1.52e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497596377 236 EKSDFLRITSHELKTPIASMLGLVEgMIYNVGPFKDHDTYLKKCKEILQEQSELVHSILEATNLD 300
Cdd:pfam00512 1 AKSEFLANLSHELRTPLTAIRGYLE-LLRDEKLDEEQREYLETILRSAERLLRLINDLLDLSRIE 64
|
|
| HATPase_EcPhoR-like |
cd16952 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
353-430 |
1.77e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoR; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli or Vibrio cholera PhoR, the histidine kinase (HK) of PhoB-PhoR a two-component signal transduction system (TCS) involved in phosphate regulation. PhoR monitors extracellular inorganic phosphate (Pi) availability and PhoB, the response regulator, regulates transcription of genes of the phosphate regulon. PhoR is a bifunctional histidine autokinase/phospho-PhoB phosphatase; in phosphate deficiency, it autophosphorylates and Pi is transferred to PhoB, and when environmental Pi is abundant, it removes the phosphoryl group from phosphorylated PhoB. Other roles of PhoB-PhoR TCS have been described, including motility, biofilm formation, intestinal colonization, and virulence in V. cholera. E.coli PhoR and Bacillus subtilis PhoR (whose HATPase domain belongs to a different family) sense very different signals in each bacterium. In E. coli the PhoR signal comes from phosphate transport mediated by the PstSCAB2 phosphate transporter and the PhoU chaperone-like protein while in B. subtilis, the PhoR activation signal comes from wall teichoic acid (WTA) metabolism.
Pssm-ID: 340428 [Multi-domain] Cd Length: 108 Bit Score: 43.73 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 353 AIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVERV---LSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKILEK 429
Cdd:cd16952 4 AFSNLVSNAVKYTPPSDTITVRWSQEESGARLSVEDTgpgIPPEHIPRLTERFYRVDIERCRNTGGTGLGLAIVKHVMSR 83
|
.
gi 497596377 430 H 430
Cdd:cd16952 84 H 84
|
|
| KinE |
COG5809 |
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome ... |
224-431 |
1.80e-05 |
|
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444511 [Multi-domain] Cd Length: 489 Bit Score: 46.89 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 224 RTENERaMAREKEKSDFLRI-------TSHELKTPIAS---MLGLVEGMIYnvgpfKDHDTYLkkckEILQEQSELVHSI 293
Cdd:COG5809 251 ITERKK-LEELLRKSEKLSVvgelaagIAHEIRNPLTSlkgFIQLLKDTID-----EEQKTYL----DIMLSELDRIESI 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 294 LeaTN-LDMALKESR--EQIRLDQLIDSSLTSYQSLAEVKGYQFEVELSP--VLIEANPVYFLKAIKNILDNAFrysckE 368
Cdd:COG5809 321 I--SEfLVLAKPQAIkyEPKDLNTLIEEVIPLLQPQALLKNVQIELELEDdiPDILGDENQLKQVFINLLKNAI-----E 393
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 497596377 369 AI-------IRV-VLRQNQLIIENQVERV-LSDEELDQVFRPFYrpdysrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:COG5809 394 AMpeggnitIETkAEDDDKVVISVTDEGCgIPEERLKKLGEPFY------TTKEKGTGLGLMVSYKIIEEHG 459
|
|
| PRK11360 |
PRK11360 |
two-component system sensor histidine kinase AtoS; |
246-431 |
2.69e-05 |
|
two-component system sensor histidine kinase AtoS;
Pssm-ID: 236901 [Multi-domain] Cd Length: 607 Bit Score: 46.50 E-value: 2.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 246 HELKTPIASMLGLVEgMIYNVGPFKDHDTYLKkckEILQEQSELVHSILEATNLDMALKESREQIRLDQLIDSSLTSYQS 325
Cdd:PRK11360 399 HEIRNPLTAIRGYVQ-IWRQQTSDPPSQEYLS---VVLREVDRLNKVIDQLLEFSRPRESQWQPVSLNALVEEVLQLFQT 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 326 LAEVKGYQFEVELSPVL--IEANPVYFLKAIKNILDNAFRYSCKEAIIRVvlrQNQLIIENQVERVLSD-------EELD 396
Cdd:PRK11360 475 AGVQARVDFETELDNELppIWADPELLKQVLLNILINAVQAISARGKIRI---RTWQYSDGQVAVSIEDngcgidpELLK 551
|
170 180 190
....*....|....*....|....*....|....*
gi 497596377 397 QVFRPFYrpdysrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:PRK11360 552 KIFDPFF------TTKAKGTGLGLALSQRIINAHG 580
|
|
| HATPase_EvgS-ArcB-TorS-like |
cd16922 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid ... |
354-431 |
4.52e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid sensor histidine kinases, similar to Escherichia coli EvgS, ArcB, TorS, BarA, RcsC; This family contains the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinases (HKs), including the following Escherichia coli HKs: EvgS, a HK of the EvgS-EvgA two-component system (TCS) that confers acid resistance; ArcB, a HK of the ArcB-ArcA TCS that modulates the expression of numerous genes in response to respiratory growth conditions; TorS, a HK of the TorS-TorR TCS which is involved in the anaerobic utilization of trimethylamine-N-oxide; BarA, a HK of the BarA-UvrY TCS involved in the regulation of carbon metabolism; and RcsC, a HK of the RcsB-RcsC TCS which regulates the expression of the capsule operon and of the cell division gene ftsZ. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), with most having accessory sensor domain(s) such as GAF, PAS and CHASE; many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340399 [Multi-domain] Cd Length: 110 Bit Score: 42.48 E-value: 4.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 354 IKNILDNAFRYSCK-EAIIRVVLR-----QNQLIIEnqVE---RVLSDEELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQ 424
Cdd:cd16922 5 LLNLLGNAIKFTEEgEVTLRVSLEeeeedGVQLRFS--VEdtgIGIPEEQQARLFEPFSQADSSTTRKYGGTGLGLAISK 82
|
....*..
gi 497596377 425 KILEKHG 431
Cdd:cd16922 83 KLVELMG 89
|
|
| HATPase_AgrC-ComD-like |
cd16935 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
316-431 |
5.85e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) including Staphylococcus aureus AgrC which is an HK of the accessory gene regulator (agr) quorum sensing two-component regulatory system (TCS) AgrC-AgrA. The agr system plays a part in the transition from persistent to virulent phenotype. This family also includes Streptococcus pneumoniae ComD HK of the ComD-ComE TCS, involved in quorum sensing and genetic competence.
Pssm-ID: 340412 [Multi-domain] Cd Length: 134 Bit Score: 42.95 E-value: 5.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 316 IDSSLTSYQSLAEVKGYQFEVELS-PVLIEANPVYFLKAIKNILDNAFRYSCK----EAIIRVVLRQNQ----LIIENQv 386
Cdd:cd16935 2 LDSLLSEKLELAREKGIEFTIEIDiPILLPISPLDLCIIFGNLLDNAIEACAKidkeNRFIHLKIRQKKgfliISIENS- 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 497596377 387 ervlSDEELDQVFRPFYRpdysrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:cd16935 81 ----YEGELKKKNGLFLS-----TKKDKNHGIGLKSIREIVKKYN 116
|
|
| PRK10364 |
PRK10364 |
two-component system sensor histidine kinase ZraS; |
224-431 |
1.01e-04 |
|
two-component system sensor histidine kinase ZraS;
Pssm-ID: 236674 [Multi-domain] Cd Length: 457 Bit Score: 44.39 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 224 RTENERAMAReKEK----SDFLRITSHELKTPIASMLGLVEgmiYNVGPFK----DHDTYLKKCKE------ILQEQSEL 289
Cdd:PRK10364 221 RQLLQDEMKR-KEKlvalGHLAAGVAHEIRNPLSSIKGLAK---YFAERAPaggeAHQLAQVMAKEadrlnrVVSELLEL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 290 VHSIleatnlDMALKEsreqIRLDQLIDSSLTSYQSLAEVKGYQFEVELSPVL--IEANPVYFLKAIKNILDNAFRYSCK 367
Cdd:PRK10364 297 VKPT------HLALQA----VDLNDLINHSLQLVSQDANSREIQLRFTANDTLpeIQADPDRLTQVLLNLYLNAIQAIGQ 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497596377 368 EAIIRVVLRQNQliieNQVERVLSD-------EELDQVFRPFYrpdysrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:PRK10364 367 HGVISVTASESG----AGVKISVTDsgkgiaaDQLEAIFTPYF------TTKAEGTGLGLAVVHNIVEQHG 427
|
|
| HATPase_TmoS-FixL-DctS-like |
cd16920 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
390-431 |
1.21e-03 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhizobium meliloti FixL, and Rhodobacter capsulatus DctS; includes hybrid sensor histidine kinase similar to Pseudomonas mendocina TmoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs), such as Pseudomonas mendocina TmoS HK of the TmoS-TmoT TCS, which controls the expression of the toluene-4-monooxygenase pathway, Rhizobium meliloti FixL HK of the FixL-FixJ TCS, which regulates the expression of the genes related to nitrogen fixation in the root nodule in response to O(2) levels, and Rhodobacter capsulatus DctS of the DctS-DctR TCS, which controls synthesis of the high-affinity C4-dicarboxylate transport system. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and PAS sensor domain(s); many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340397 [Multi-domain] Cd Length: 104 Bit Score: 38.15 E-value: 1.21e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 497596377 390 LSDEELDQVFRPFYrpdysrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:cd16920 49 IAEEVAGQLFDPFY------TTKSEGLGMGLSICRSIIEAHG 84
|
|
| Tar |
COG0840 |
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; |
7-229 |
1.43e-03 |
|
Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms];
Pssm-ID: 440602 [Multi-domain] Cd Length: 533 Bit Score: 41.16 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 7 NFIIVAAMISFISVTLLGLLYYAMPIYYNQVKKQELRHDYMTVAKQLDGMPEAKIISEIDDFDIKTPNIIISLFSSDRKI 86
Cdd:COG0840 41 TALALLLLLSLLALLLLLLLLALALLLVLLALLLLLALVVLLALLLALLLLLLALLALALAALALLAALAALLALLELLL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 87 IYPDPNDEMAKKHENEYLENGDFDEIGSWGAEITSAEGVTYYL-LFNYGFHSLSDVSQTLVTFYPFILLLIIVLAVSVAF 165
Cdd:COG0840 121 AALLAALAIALLALAALLALAALALALLALALLAAAAAAAAALaALLEAAALALAAAALALALLAAALLALVALAIILAL 200
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 497596377 166 VYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLSSIDELRTENER 229
Cdd:COG0840 201 LLSRSITRPLRELLEVLERIAEGDLTVRIDVDSKDEIGQLADAFNRMIENLRELVGQVRESAEQ 264
|
|
| HAMP |
pfam00672 |
HAMP domain; |
166-216 |
2.17e-03 |
|
HAMP domain;
Pssm-ID: 459898 [Multi-domain] Cd Length: 53 Bit Score: 36.06 E-value: 2.17e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 497596377 166 VYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKL 216
Cdd:pfam00672 1 LLARRILRPLRRLAEAARRIASGDLDVRLPVSGRDEIGELARAFNQMAERL 51
|
|
| HATPase_FilI-like |
cd16921 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
396-431 |
2.26e-03 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Methanosaeta harundinacea FilI and some hybrid sensor histidine kinases; This family includes FilI, the histidine kinase (HK) component of FilI-FilRs, a two-component signal transduction system (TCS) of the methanogenic archaeon, Methanosaeta harundinacea, which is involved in regulating methanogenesis. The cytoplasmic HK core consists of a C-terminal HK-like ATPase domain (represented here) and a histidine kinase dimerization and phosphoacceptor domain (HisKA) domain, which, in FilI, are coupled to CHASE, HAMP, PAS, and GAF sensor domains. FilI-FilRs catalyzes the phosphotransfer between FilI (HK) and FilRs (FilR1 and FilR2, response regulators) of the TCS. TCSs are predicted to be of bacterial origin, and acquired by archaea by horizontal gene transfer. This model also includes related HATPase domains such as that of Synechocystis sp. PCC6803 phytochrome-like protein Cph1. Proteins having this HATPase domain and HisKA domain also have accessory sensor domains such as CHASE, GAF, HAMP and PAS; some are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340398 [Multi-domain] Cd Length: 105 Bit Score: 37.69 E-value: 2.26e-03
10 20 30
....*....|....*....|....*....|....*.
gi 497596377 396 DQVFRPFYRPDYsrDKKDGGIGIGLFIVQKILEKHG 431
Cdd:cd16921 52 EKVFGIFQRLHS--REEYEGTGVGLAIVRKIIERHG 85
|
|
| HATPase_TutC-TodS-like |
cd16925 |
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas ... |
354-431 |
2.75e-03 |
|
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas putida TodS and Thauera aromatica TutC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) such Pseudomonas putida TodS HK of the TodS-TodT two-component regulatory system (TCS) which controls the expression of a toluene degradation pathway. Thauera aromatica TutC may be part of a TCS that is involved in anaerobic toluene metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), PAS sensor domain(s) and a REC domain.
Pssm-ID: 340402 [Multi-domain] Cd Length: 110 Bit Score: 37.47 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497596377 354 IKNILDNAFRYSCKEAIIRVVLRQNQLiieNQVERVLSD-------EELDQVFRPFYRPDYSRDKKDGGIGIGLFIVQKI 426
Cdd:cd16925 9 VLNLLSNAFKFTPDGGRIRCILEKFRL---NRFLLTVSDsgpgippNLREEIFERFRQGDGSSTRAHGGTGLGLSIVKEF 85
|
....*
gi 497596377 427 LEKHG 431
Cdd:cd16925 86 VELHG 90
|
|
| HAMP |
smart00304 |
HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; |
169-221 |
5.08e-03 |
|
HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain;
Pssm-ID: 197640 [Multi-domain] Cd Length: 53 Bit Score: 34.92 E-value: 5.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 497596377 169 RLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLSSID 221
Cdd:smart00304 1 RRLLRPLRRLAEAAQRIADGDLTVRLPVDGRDEIGELARAFNEMADRLEETIA 53
|
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| |
