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Conserved domains on  [gi|498118970|ref|WP_010433126|]
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MULTISPECIES: hypothetical protein [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phage_TAC_14 super family cl24884
Phage tail assembly chaperone protein, TAC; This is a family of Siphoviridae phage tail ...
 5-114 2.84e-26

Phage tail assembly chaperone protein, TAC; This is a family of Siphoviridae phage tail assembly chaperone proteins.


The actual alignment was detected with superfamily member pfam16462:

Pssm-ID: 465124  Cd Length: 113  Bit Score: 94.33  E-value: 2.84e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498118970    5 SLINPLNTTVEKTLLGQKVYLRRLTSAELDDYNDKVEAGRQARlPSRELSAMGVNLFLAALVNEDGSKPKASELPTADQL 84
Cdd:pfam16462   5 ALLKPLNHAKACELFGGKVFIRRMSALALLDLEEKAEKAFEAG-DGREASLLNVQILLDCLCDDDGQPIPPDALPTADAL 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 498118970   85 MAAHANADLLDAVTLVQRHSYGTLEEATKN 114
Cdd:pfam16462  84 MAAHDNATIIDAIAIVKRHAIGSLEDAEKK 113
 
Name Accession Description Interval E-value
Phage_TAC_14 pfam16462
Phage tail assembly chaperone protein, TAC; This is a family of Siphoviridae phage tail ...
 5-114 2.84e-26

Phage tail assembly chaperone protein, TAC; This is a family of Siphoviridae phage tail assembly chaperone proteins.


Pssm-ID: 465124  Cd Length: 113  Bit Score: 94.33  E-value: 2.84e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498118970    5 SLINPLNTTVEKTLLGQKVYLRRLTSAELDDYNDKVEAGRQARlPSRELSAMGVNLFLAALVNEDGSKPKASELPTADQL 84
Cdd:pfam16462   5 ALLKPLNHAKACELFGGKVFIRRMSALALLDLEEKAEKAFEAG-DGREASLLNVQILLDCLCDDDGQPIPPDALPTADAL 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 498118970   85 MAAHANADLLDAVTLVQRHSYGTLEEATKN 114
Cdd:pfam16462  84 MAAHDNATIIDAIAIVKRHAIGSLEDAEKK 113
 
Name Accession Description Interval E-value
Phage_TAC_14 pfam16462
Phage tail assembly chaperone protein, TAC; This is a family of Siphoviridae phage tail ...
 5-114 2.84e-26

Phage tail assembly chaperone protein, TAC; This is a family of Siphoviridae phage tail assembly chaperone proteins.


Pssm-ID: 465124  Cd Length: 113  Bit Score: 94.33  E-value: 2.84e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498118970    5 SLINPLNTTVEKTLLGQKVYLRRLTSAELDDYNDKVEAGRQARlPSRELSAMGVNLFLAALVNEDGSKPKASELPTADQL 84
Cdd:pfam16462   5 ALLKPLNHAKACELFGGKVFIRRMSALALLDLEEKAEKAFEAG-DGREASLLNVQILLDCLCDDDGQPIPPDALPTADAL 83

                          90       100       110
                  ....*....|....*....|....*....|
gi 498118970   85 MAAHANADLLDAVTLVQRHSYGTLEEATKN 114
Cdd:pfam16462  84 MAAHDNATIIDAIAIVKRHAIGSLEDAEKK 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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