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Conserved domains on  [gi|498120434|ref|WP_010434590|]
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MULTISPECIES: DUF2971 domain-containing protein [Vibrio]

Protein Classification

DUF2971 domain-containing protein( domain architecture ID 10567733)

DUF2971 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2971 pfam11185
Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.
 152-228 4.41e-09

Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.


:

Pssm-ID: 463238  Cd Length: 89  Bit Score: 52.97  E-value: 4.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498120434  152 LWSHYGDQHHGICVGYDLN---------RTPKPNLHKVTYGG---NRIIHTSLILKAIVEGRNDYREELDKNVLLRKALP 219
Cdd:pfam11185   1 MWRHYGDNHTGVAIGFDKDklkkiineeNFELSKKSEVIYDDeeqEITIKLILLKAIELEKGALKELKLNNVEEEEKHPA 80


                  ....*....
gi 498120434  220 WSYEEEWRL 228
Cdd:pfam11185  81 FSYEKEWRL 89
 
Name Accession Description Interval E-value
DUF2971 pfam11185
Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.
 152-228 4.41e-09

Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.


Pssm-ID: 463238  Cd Length: 89  Bit Score: 52.97  E-value: 4.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498120434  152 LWSHYGDQHHGICVGYDLN---------RTPKPNLHKVTYGG---NRIIHTSLILKAIVEGRNDYREELDKNVLLRKALP 219
Cdd:pfam11185   1 MWRHYGDNHTGVAIGFDKDklkkiineeNFELSKKSEVIYDDeeqEITIKLILLKAIELEKGALKELKLNNVEEEEKHPA 80


                  ....*....
gi 498120434  220 WSYEEEWRL 228
Cdd:pfam11185  81 FSYEKEWRL 89
 
Name Accession Description Interval E-value
DUF2971 pfam11185
Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.
 152-228 4.41e-09

Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.


Pssm-ID: 463238  Cd Length: 89  Bit Score: 52.97  E-value: 4.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498120434  152 LWSHYGDQHHGICVGYDLN---------RTPKPNLHKVTYGG---NRIIHTSLILKAIVEGRNDYREELDKNVLLRKALP 219
Cdd:pfam11185   1 MWRHYGDNHTGVAIGFDKDklkkiineeNFELSKKSEVIYDDeeqEITIKLILLKAIELEKGALKELKLNNVEEEEKHPA 80


                  ....*....
gi 498120434  220 WSYEEEWRL 228
Cdd:pfam11185  81 FSYEKEWRL 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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