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Conserved domains on  [gi|498360095|ref|WP_010674251|]
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MULTISPECIES: maltose ABC transporter permease MalG [Aeromonas]

Protein Classification

maltose ABC transporter permease MalG( domain architecture ID 10793519)

maltose ABC transporter permease MalG is part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


:

Pssm-ID: 182891  Cd Length: 296  Bit Score: 540.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   1 MAIVQPKSVKYRVWATHLVMWGFLALIIFPLIMVIAISFRNGNFSVGEIIPTNPTLDHWKLALGMSITNADGSITPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  81 VLTWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 161 GLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 498360095 241 NNLTLAVGAQQYLYPQNYLWGDFAAAAVLSGFPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 540.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   1 MAIVQPKSVKYRVWATHLVMWGFLALIIFPLIMVIAISFRNGNFSVGEIIPTNPTLDHWKLALGMSITNADGSITPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  81 VLTWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 161 GLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 498360095 241 NNLTLAVGAQQYLYPQNYLWGDFAAAAVLSGFPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 4-296 3.19e-116

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 335.58  E-value: 3.19e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   4 VQPKSVKYRVWATHLVMWGFLALIIFPLIMVIAISFRNGNF-SVGEIIPTNPTLDHWKLALGmsitnadgsitppPFPVL 82
Cdd:COG3833    6 SRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPFL 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  83 TWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDyipwlgLNTHGGL 162
Cdd:COG3833   73 RWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLGL 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 163 ILAYMGG-IALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDVN 241
Cdd:COG3833  147 ILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSPE 226

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 498360095 242 NLTLAVGAQQYLYPQ-NYLWGDFAAAAVLSGFPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG3833  227 NYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 1.20e-17

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 78.86  E-value: 1.20e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  85 LWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDyIPWLGLNTHGGLIL 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLG-WGILPGLGLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 165 AYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDVNNLT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 498360095 245 LAVGAQQYLYPQNYLWGDFAAAAVLSGFPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 81-229 1.56e-08

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 54.25  E-value: 1.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   81 VLTWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKStILQGM--LIFQMFPAV--LALVAIYALFNKIGDYIPWLGL 156
Cdd:TIGR02139  48 VLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR-IVDALvdLPFALPTAVagIALATLYSPNGWIGSFLAPLGI 126

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 498360095  157 N---THGGLILAYM-GGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITE 229
Cdd:TIGR02139 127 KiafTPLGIVIALVfVSLPFVVRTVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGE 203
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 125-286 3.29e-08

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 52.30  E-value: 3.29e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  125 MLIFQMFPAVLALVAIYALFnkigdYIPWLGLNTHGGLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFR 204
Cdd:pfam00528  24 IDLLQALPSFVLAILLVVIA-----ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFR 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  205 LILLPLSVPILAVVFILAFIGSITEVPMASILLQDVN-NLTLAVGAQQYLYPQNYLwgdFAAAAVLSGFPITVVFLLAQR 283
Cdd:pfam00528  99 KIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGlGLLLIEAILGYDYPEIQG---PVLAAALILLLLNLLVDILQR 175


                  ...
gi 498360095  284 WLV 286
Cdd:pfam00528 176 LLD 178
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 540.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   1 MAIVQPKSVKYRVWATHLVMWGFLALIIFPLIMVIAISFRNGNFSVGEIIPTNPTLDHWKLALGMSITNADGSITPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  81 VLTWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 161 GLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 498360095 241 NNLTLAVGAQQYLYPQNYLWGDFAAAAVLSGFPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 4-296 3.19e-116

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 335.58  E-value: 3.19e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   4 VQPKSVKYRVWATHLVMWGFLALIIFPLIMVIAISFRNGNF-SVGEIIPTNPTLDHWKLALGmsitnadgsitppPFPVL 82
Cdd:COG3833    6 SRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPFL 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  83 TWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDyipwlgLNTHGGL 162
Cdd:COG3833   73 RWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLGL 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 163 ILAYMGG-IALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDVN 241
Cdd:COG3833  147 ILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSPE 226

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 498360095 242 NLTLAVGAQQYLYPQ-NYLWGDFAAAAVLSGFPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG3833  227 NYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 14-296 6.10e-69

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 215.34  E-value: 6.10e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  14 WATHLVMWGFLALIIFPLIMVIAISFRNGN--FSVG-EIIPTNPTLDHWKLALGMSitnadgsitpppfPVLTWLWNSIK 90
Cdd:COG0395   15 ILLYLLLILLALLFLFPLYWMVVTSFKPPAeiFSGPpSLLPSEFTLENYRAAFTDG-------------PFGRYLLNSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  91 VAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGdyipwlGLNTHGGLILAYMG-G 169
Cdd:COG0395   82 VAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLG------LLNTYWGLILPYLAfG 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 170 IALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDVNNLTLAVGA 249
Cdd:COG0395  156 LPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPDLRTLPVGL 235

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 498360095 250 QQYLYPQNYLWGDFAAAAVLSGFPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG0395  236 ASFQGQYGTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVKG 282
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 14-285 1.08e-27

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 107.89  E-value: 1.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  14 WATHLVMWGFLALIIFPLIMVIAISFRNGNFsvGEIIPTNPTLDHWKLALGMSitnadgsitpppfPVLTWLWNSIKVAG 93
Cdd:COG1177    7 LLLRLFLALVLLFLYLPILVLVLYSFNDSWF--LTFPPEGFTLRWYAELFSDP-------------RLLDALLNSLLIAL 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  94 ITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYipwlglNTHGGLILAY-MGGIAL 172
Cdd:COG1177   72 LSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHvVFTLPF 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 173 HVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMaSILLQDVNNLTLAVGAQQY 252
Cdd:COG1177  146 VVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVI-TLFLAGPGVTTLPVYIYSM 224

                        250       260       270
                 ....*....|....*....|....*....|...
gi 498360095 253 LYPQNYLWGdfAAAAVLSGFPITVVFLLAQRWL 285
Cdd:COG1177  225 IRRGISPEI--NALSTLLILLSLLLLLLAERLR 255
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
12-285 3.26e-24

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 101.78  E-value: 3.26e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  12 RVWATHLVMWGFLALIIFPLIMVIAISFRNGnfsvgeiIPTNPTLDHWKLALGMSitnadgsitpppfPVLTWLWNSIKV 91
Cdd:COG1178  287 RWLALALCLLLVLLGLLLPLLALLLWSLTKA-------LDDNLTLDNYRFVLLDP-------------SLLRALLNSLLL 346

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  92 AGITALMIVVLSTTCAYAFARLRFRGKSTILQ-GMLIFQMFPAVLALvAIYALFNKigdYIPWLGLNTHGGLILAYMG-G 169
Cdd:COG1178  347 ALLAALLAVLLALLLAYLVRRRRGRLARLLDRlAMLPYAVPGIVLGL-GLLLLFNR---PLPLLLYGTLAILVLAYVVrF 422

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 170 IALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPmASILLQDVNNLTLAVGA 249
Cdd:COG1178  423 LPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELS-ATLLLRPPGFETLAVLI 501

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 498360095 250 QQYLypQNYLWGDFAAAAVLSGFPITVVFLLAQRWL 285
Cdd:COG1178  502 YQLA--SSGRYGEAAALALLLVLVSLLPVLLLERLL 535
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
85-296 2.84e-20

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 90.61  E-value: 2.84e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  85 LWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHGGLIL 164
Cdd:COG1178   56 LGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALFGLEPPD 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 165 AY-MGGIAL---------HVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMAS 234
Cdd:COG1178  136 IYgLGGIILvlvlfnypyVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPL 215

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 498360095 235 ILLQDVNNLTLAVgAQQYLYPqnylwGDFAAAAVLSG--FPITVVFLLAQRWLVGGLTAGGVKG 296
Cdd:COG1178  216 VLGGGYTTLTTAI-YQAWLGD-----FDLGAAAALALvlLLLVLLLLLLERRLRRRRRYATVGG 273
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 1.20e-17

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 78.86  E-value: 1.20e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  85 LWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDyIPWLGLNTHGGLIL 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLG-WGILPGLGLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 165 AYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQDVNNLT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 498360095 245 LAVGAQQYLYPQNYLWGDFAAAAVLSGFPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 23-293 2.15e-16

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 77.50  E-value: 2.15e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  23 FLALIIFPLIMVIAISFRNGNfSVGEIIPTnPTLDHWKLALGMSITnadgsitpppfpvLTWLWNSIKVAGITALMIVVL 102
Cdd:COG1176   22 LLLFFVLPLLLLLVYSFTTRD-PYGGVVPG-FTLENYARLFTDPLY-------------LKVLLRTLWIALLTTLICLLL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 103 STTCAYAFARLRFRGKSTILqGMLIFQMF-PAVLALVAIYALFNK---IGDYIPWLG--------LNTHGGLILAYmggi 170
Cdd:COG1176   87 GYPIAYFLARAPPRWRNLLL-LLVILPFWtSFLVRTYAWIVLLGRnglLNSLLLALGlideplrlLYTEFAVVIGL---- 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 171 aLHVW------TIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVpMASILLQDVNNLT 244
Cdd:COG1176  162 -VYVYlpfmvlPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAF-VTPALLGGGKVLM 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 498360095 245 LA-VGAQQYLYPQNylWGdFAAAAVLSGFPITVVFLLAQRWLVGGLTAGG 293
Cdd:COG1176  240 IGnLIYQQFLSALN--WP-LAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 81-229 5.29e-16

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 75.94  E-value: 5.29e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  81 VLTWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKStILQGM--LIFQMFPAV--LALVAIYALFNKIGDYIPWLGL 156
Cdd:COG0555   52 VLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKR-LVDALvdLPFALPTAVagIALLLLFGPNGWLGQLLAPLGI 130

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 498360095 157 N---THGGLILAyMGGIAL--HVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITE 229
Cdd:COG0555  131 KvafTPLGIVLA-QTFVSLpfVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGE 207
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 85-223 3.73e-14

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 70.08  E-value: 3.73e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  85 LWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKStILQGMLifqMFPAVLALVAI-YAL---FNKIGdyipWLG--LNT 158
Cdd:COG4149    9 LWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKG-LLEALV---TLPLVLPPTVLgFYLlllFGRNG----PLGqlLEE 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498360095 159 HGGLILAY-MGGIA---------LHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAF 223
Cdd:COG4149   81 LFGISLVFtWTGAVlasvvvslpLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAF 155
modB PRK09421
molybdate ABC transporter permease subunit;
88-229 3.38e-11

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 61.86  E-value: 3.38e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  88 SIKVAGITALMIVVLSTTCAYAFARLRFRGKStILQGMLifqMFPAVLALVAI-YAL---FNK---IGDYI-PWLGL--- 156
Cdd:PRK09421  14 SLKVSSVAVLFSLPFGILVAWLLARCRFPGKS-LLDSLL---HLPLVLPPVVTgYLLlisMGRrgfIGQWLyEWFGIsfa 89

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 498360095 157 -NTHGGLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITE 229
Cdd:PRK09421  90 fSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
1-226 5.33e-11

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 62.07  E-value: 5.33e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   1 MAIVQPKSVKYRVWATHLVMWGFLA--------LIIFPLIMVIAISFRNGNfsvgeIIPTNPT---LDHWKLALGMSItn 69
Cdd:COG1175    1 MTTTTSAAARRRRRRRRLAAYLFLLpalllllvFVLYPLLYTLYLSFTDWN-----LLGPPPEfvgLDNYARLFTDPR-- 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  70 adgsitpppfpvltwLWNSIKVAGITALMIVVLSTTCAYAFARL---RFRGKStILQGMLIFqmfPAVLALVAI------ 140
Cdd:COG1175   74 ---------------FWNALGNTLLFTVVSVPLQLVLGLLLALLlnrKLRGRG-FFRTLFFL---PWVISPVVValiwkw 134

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 141 -----YALFNKIgdyIPWLGLNTHGGLI---LAYMGGIALHVWTIKGYF--------ETIDSSLEEAAAIDGATPWQAFR 204
Cdd:COG1175  135 lfnpdYGLLNAL---LGALGLEPINWLGdpsLALPAVIIVTVWKGTGFNmliflaglQSIPRELYEAARIDGASPWQRFR 211

                        250       260
                 ....*....|....*....|..
gi 498360095 205 LILLPLSVPILAVVFILAFIGS 226
Cdd:COG1175  212 RITLPLLRPTILFVLVLSTIGA 233
PRK10973 PRK10973
sn-glycerol-3-phosphate ABC transporter permease UgpE;
77-289 2.08e-10

sn-glycerol-3-phosphate ABC transporter permease UgpE;


Pssm-ID: 182875 [Multi-domain]  Cd Length: 281  Bit Score: 60.13  E-value: 2.08e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  77 PPFPVLtwLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPA---VLALVAIYALFNKigdyipw 153
Cdd:PRK10973  71 APFGRM--LLNSFVMAFSITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVevrIFPTVEVIANLKM------- 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095 154 lgLNTHGGLILAYMGGiALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMA 233
Cdd:PRK10973 142 --LDSYAGLTLPLMAS-ATATFLFRQFFMTLPDELVEAARIDGASPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWP 218

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 498360095 234 SILLQDVNNLTLAVGAQQYLYPQNYL--WGDFAAAAVLSGFPITVVFLLAQRWLVGGL 289
Cdd:PRK10973 219 LLIITDVSLGTAVAGIKGMIATGEGTteWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL 276
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 86-230 1.05e-08

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 54.99  E-value: 1.05e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  86 WNSIKVAGITALMIVVLSTTCAYAFARLRFRGKStILQGML-IFQMFPAVLALVAIYALFNKIGdyIP---WLGLNTHGG 161
Cdd:PRK09500  60 QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKK-FVSGMLfVVMMSPDIVMAISLLVLFMLLG--IQlgfWSLLFAHIT 136

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498360095 162 LILAYMggialhVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEV 230
Cdd:PRK09500 137 FCLPFV------VVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDV 199
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 81-229 1.56e-08

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 54.25  E-value: 1.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   81 VLTWLWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKStILQGM--LIFQMFPAV--LALVAIYALFNKIGDYIPWLGL 156
Cdd:TIGR02139  48 VLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR-IVDALvdLPFALPTAVagIALATLYSPNGWIGSFLAPLGI 126

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 498360095  157 N---THGGLILAYM-GGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITE 229
Cdd:TIGR02139 127 KiafTPLGIVIALVfVSLPFVVRTVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGE 203
cysT CHL00187
sulfate transport protein; Provisional
 88-229 1.75e-08

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 53.86  E-value: 1.75e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  88 SIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGM-LIFQMFPAV--LALVAIYALFNKIGDYIPWLGLN---THGG 161
Cdd:CHL00187  60 TLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVdLPFALPTSVagLTLATVYGDNGWIGHLLSHLGIQivfTKLG 139

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498360095 162 LILAYM-GGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITE 229
Cdd:CHL00187 140 VLLAMIfVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 125-286 3.29e-08

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 52.30  E-value: 3.29e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  125 MLIFQMFPAVLALVAIYALFnkigdYIPWLGLNTHGGLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFR 204
Cdd:pfam00528  24 IDLLQALPSFVLAILLVVIA-----ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFR 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  205 LILLPLSVPILAVVFILAFIGSITEVPMASILLQDVN-NLTLAVGAQQYLYPQNYLwgdFAAAAVLSGFPITVVFLLAQR 283
Cdd:pfam00528  99 KIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGlGLLLIEAILGYDYPEIQG---PVLAAALILLLLNLLVDILQR 175


                  ...
gi 498360095  284 WLV 286
Cdd:pfam00528 176 LLD 178
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 85-280 3.71e-07

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 51.22  E-value: 3.71e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   85 LWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHGGLIL 164
Cdd:TIGR03262  56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSIYGFWG 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  165 AYMGGI------ALHVWTIKgyFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASILLQ 238
Cdd:TIGR03262 136 IVIGEVfytfphALMILVTA--LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGG 213

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 498360095  239 DVNNLTLAVgAQQYLYPQNYLWGdfAAAAVLSGFPITVVFLL 280
Cdd:TIGR03262 214 DYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFGI 252
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 85-279 1.82e-06

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 48.12  E-value: 1.82e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095   85 LWNSIKVAGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLglNTHGGLIL 164
Cdd:TIGR00969  62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWL--ASFGIQII 139

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  165 AYMGGIALH---------VWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMASI 235
Cdd:TIGR00969 140 FTWPGMALAmifvslpfvVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVV 219

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 498360095  236 LLQDVNNLTLAVGAQQYLYPQNYLW-GDFAAAAVLSGFPITVVFL 279
Cdd:TIGR00969 220 VSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
LplB COG4209
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ...
 183-248 1.21e-05

ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 443357 [Multi-domain]  Cd Length: 316  Bit Score: 45.85  E-value: 1.21e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 498360095 183 TIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAfIGSITEVPMASILLQDvNNLTLAVG 248
Cdd:COG4209  202 GIDPELYEAAAIDGAGRWQQIWHITLPGIRPTIVILLILN-IGNILNVGFEQIYLLY-NPLNYSTS 265
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 88-234 2.35e-05

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 44.84  E-value: 2.35e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  88 SIKVAGITALMIVVLSTTCAYAFARL-RFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHGGLILAY 166
Cdd:PRK10592  68 SLTIAACAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAH 147

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498360095 167 MGGIALHVWT-IKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITEVPMAS 234
Cdd:PRK10592 148 VTFCTAYVAVvISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIAS 216
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
92-229 2.64e-05

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 44.74  E-value: 2.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498360095  92 AGITALMIVVLSTTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLG------LNTHGGLILA 165
Cdd:PRK10971  67 AFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAkfdikvTYTWLGIAVA 146

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498360095 166 Y-MGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAFIGSITE 229
Cdd:PRK10971 147 MaFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGE 211
malF PRK10999
maltose ABC transporter permease MalF;
179-223 1.02e-03

maltose ABC transporter permease MalF;


Pssm-ID: 236816 [Multi-domain]  Cd Length: 520  Bit Score: 40.33  E-value: 1.02e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 498360095 179 GYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVVFILAF 223
Cdd:PRK10999 396 GLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASF 440
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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