|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
42-158 |
1.38e-15 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 76.65 E-value: 1.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 42 TDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPE 121
Cdd:PTZ00449 552 TKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPK 631
|
90 100 110
....*....|....*....|....*....|....*..
gi 498401131 122 KPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPID 158
Cdd:PTZ00449 632 SPKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPFD 668
|
|
| Streccoc_I_II |
NF033804 |
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ... |
35-156 |
2.13e-15 |
|
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.
Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 76.13 E-value: 2.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 35 TPPITEPtDSSEPTNPTEPVDPAEPPVIPTnPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEP 114
Cdd:NF033804 866 TPPVKTP-DQPEPSKPEEPTYETEKPLEPA-PVAPTYENEPTPPVKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEP 943
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 498401131 115 TTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:NF033804 944 TPPVKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTPPAVP 985
|
|
| Streccoc_I_II |
NF033804 |
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ... |
30-100 |
2.07e-06 |
|
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.
Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 49.17 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPA-TPPITEPTDSSEPTNPTE------PVDPA-----EPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPV 97
Cdd:NF033804 904 PTPPVkTPDQPEPSKPEEPTYETEkplepaPVAPSyenepTPPVKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTPPA 983
|
...
gi 498401131 98 EPT 100
Cdd:NF033804 984 VPT 986
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
82-149 |
4.46e-06 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 47.70 E-value: 4.46e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 498401131 82 EKPTEPTTPIDPGTPVEPT-EPSEPTEPSQPTEPTTP--SEPEKPVTPEQPKEPTQ--PVIPEKPAEPETPKT 149
Cdd:NF033838 414 EKPAEQPQPAPAPQPEKPApKPEKPAEQPKAEKPADQqaEEDYARRSEEEYNRLTQqqPPKTEKPAQPSTPKT 486
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
64-166 |
1.21e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 64 TNPTEPSKPTEPTTPSEPEKPTEPTTPidpgTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAe 143
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAA----AAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPA- 339
|
90 100
....*....|....*....|...
gi 498401131 144 PETPKTPEQPTKPIDVVVTPSGE 166
Cdd:COG3266 340 PEAAAAAAAPAAPAVAKKLAADE 362
|
|
| Amelogenin |
smart00818 |
Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth; They seem ... |
53-158 |
2.55e-04 |
|
Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth; They seem to regulate formation of crystallites during the secretory stage of tooth enamel development and are thought to play a major role in the structural organisation and mineralisation of developing enamel. The extracellular matrix of the developing enamel comprises two major classes of protein: the hydrophobic amelogenins and the acidic enamelins. Circular dichroism studies of porcine amelogenin have shown that the protein consists of 3 discrete folding units: the N-terminal region appears to contain beta-strand structures, while the C-terminal region displays characteristics of a random coil conformation. Subsequent studies on the bovine protein have indicated the amelogenin structure to contain a repetitive beta-turn segment and a "beta-spiral" between Gln112 and Leu138, which sequester a (Pro, Leu, Gln) rich region. The beta-spiral offers a probable site for interactions with Ca2+ ions. Muatations in the human amelogenin gene (AMGX) cause X-linked hypoplastic amelogenesis imperfecta, a disease characterised by defective enamel. A 9bp deletion in exon 2 of AMGX results in the loss of codons for Ile5, Leu6, Phe7 and Ala8, and replacement by a new threonine codon, disrupting the 16-residue (Met1-Ala16) amelogenin signal peptide.
Pssm-ID: 197891 [Multi-domain] Cd Length: 165 Bit Score: 40.93 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 53 PVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPveptepsEPTEPSQPTEPTTPSEPEKPVTPEQPKEP 132
Cdd:smart00818 59 PVLPAQQPVVPQQPLMPVPGQHSMTPTQHHQPNLPQPAQQPFQP-------QPLQPPQPQQPMQPQPPVHPIPPLPPQPP 131
|
90 100
....*....|....*....|....*.
gi 498401131 133 TQPVIPEKPAEPETPKTPEQPTKPID 158
Cdd:smart00818 132 LPPMFPMQPLPPLLPDLPLEAWPATD 157
|
|
| Agg_substance |
NF033875 |
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ... |
56-196 |
2.65e-04 |
|
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.
Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 42.39 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 56 PAEPPVIPTNPTEPSKPTEPTTPSEPE---------KPT--EPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKP- 123
Cdd:NF033875 50 PGTTTVQPDNPDPQSGSETPKTAVSEEatvqkdttsQPTkvEEVASEKNGAEQSSATPNDTTNAQQPTVGAEKSAQEQPv 129
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 498401131 124 VTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKpidvVVTPsgEIDKTNQSAGTQPSIPIETSNLAEVTHVPSE 196
Cdd:NF033875 130 VSPETTNEPLGQPTEVAPAENEANKSTSIPKE----FETP--DVDKAVDEAKKDPNITVVEKPAEDLGNVSSK 196
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
39-128 |
7.11e-04 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 39 TEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEkpTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPS 118
Cdd:NF041121 15 MGRAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPE--PAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVR 92
|
90
....*....|
gi 498401131 119 EPEKPVTPEQ 128
Cdd:NF041121 93 VPAPPALPNP 102
|
|
| Gram_pos_anchor |
pfam00746 |
LPXTG cell wall anchor motif; |
243-274 |
1.77e-03 |
|
LPXTG cell wall anchor motif;
Pssm-ID: 366278 [Multi-domain] Cd Length: 43 Bit Score: 35.59 E-value: 1.77e-03
10 20 30
....*....|....*....|....*....|..
gi 498401131 243 ASDGKMKVLPHTGEKFTLLFSVLGSFFVLISG 274
Cdd:pfam00746 1 AKKSKKKTLPKTGENSNIFLTAAGLLALLGGL 32
|
|
| PRP8 |
COG5178 |
U5 snRNP spliceosome subunit [RNA processing and modification]; |
114-257 |
4.50e-03 |
|
U5 snRNP spliceosome subunit [RNA processing and modification];
Pssm-ID: 227505 [Multi-domain] Cd Length: 2365 Bit Score: 38.81 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 114 PTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNqsagtqpsIPIETSNLAEVTHV 193
Cdd:COG5178 6 PGNPPPPPPPPGFEPPSQPPPPPPPGVNVKKRSRKQLSIVGDILGHSGNPIYSLRVSD--------KPVKLGNKAKTLHV 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 498401131 194 PSETTPItteageeivavdkgvpltkTPEGLKPISSSYKVLPSG--NVEVKASDGKMKVLPHTGEK 257
Cdd:COG5178 78 LTLKAPI-------------------PPEHLRKIQSPCSDMPSVltKVDKRSYLGALKYLPHAVLK 124
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
18-148 |
5.91e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 37.82 E-value: 5.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 18 GGSITAFAD--------DLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNP--TEPSKPTEPTTPSEPEKPTEP 87
Cdd:NF040712 174 GGTVTALDDearwlidpDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDsdPAEAGTPDDLASARRRRAGVE 253
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 88 TTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQ----PKEPTQPVIPE-----KPAEPETPK 148
Cdd:NF040712 254 QPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAAETPEAAEPpapaPAAPAAPAAPEaeepaRPEPPPAPK 323
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
29-111 |
6.11e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 37.67 E-value: 6.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSkpTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEP 108
Cdd:NF041121 17 RAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPE--PAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVP 94
|
...
gi 498401131 109 SQP 111
Cdd:NF041121 95 APP 97
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
50-226 |
6.71e-03 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 37.36 E-value: 6.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 50 PTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPiDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQP 129
Cdd:TIGR02223 48 LTESKQANEPETLQPKNQTENGETAADLPPKPEERWSYIEE-LEAREVLINDPEEPSNGGGVEESAQLTAEQRQLLEQMQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 130 KEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVTHVPSETT-PITTEAGEEI 208
Cdd:TIGR02223 127 ADMRAAEKVLATAPSEQTVAVEARKQTAEKKPQKARTAEAQKTPVETEKIASKVKEAKQKQKALPKQTAeTQSNSKPIET 206
|
170
....*....|....*...
gi 498401131 209 VAVDKGVPLTKTPEGLKP 226
Cdd:TIGR02223 207 APKADKADKTKPKPKEKA 224
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
69-254 |
6.87e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 37.72 E-value: 6.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 69 PSKPTEPTTPSEPEKPTEPTTpidpgtpveptePSEPTEPSQPtepttPSEPEKPVTPEQPKEPTQPVIPEKPAepeTPK 148
Cdd:pfam05539 169 KTAVTTSKTTSWPTEVSHPTY------------PSQVTPQSQP-----ATQGHQTATANQRLSSTEPVGTQGTT---TSS 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 149 TPEQPTKPIDVVVTPSGeidkTNQSAGTQPSiPIETSNLAEVTHVPSETTPITTEAGEEIVAVDKGVPLTKTPEGLKPIS 228
Cdd:pfam05539 229 NPEPQTEPPPSQRGPSG----SPQHPPSTTS-QDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTP 303
|
170 180
....*....|....*....|....*.
gi 498401131 229 SSYKVLPSGNVEVKASDGKMKVLPHT 254
Cdd:pfam05539 304 RPTATTQSGSSPPHSSPPGVQANPTT 329
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
42-158 |
1.38e-15 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 76.65 E-value: 1.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 42 TDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPE 121
Cdd:PTZ00449 552 TKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPK 631
|
90 100 110
....*....|....*....|....*....|....*..
gi 498401131 122 KPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPID 158
Cdd:PTZ00449 632 SPKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPFD 668
|
|
| Streccoc_I_II |
NF033804 |
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ... |
35-156 |
2.13e-15 |
|
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.
Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 76.13 E-value: 2.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 35 TPPITEPtDSSEPTNPTEPVDPAEPPVIPTnPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEP 114
Cdd:NF033804 866 TPPVKTP-DQPEPSKPEEPTYETEKPLEPA-PVAPTYENEPTPPVKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEP 943
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 498401131 115 TTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:NF033804 944 TPPVKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTPPAVP 985
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
19-181 |
6.92e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 65.73 E-value: 6.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 19 GSITAFADDLGPTDP------------ATPPITEPTDSSEPTNPTEPVDPAEP--PVIPTNPTEPSKPTEPTTPSEPEKP 84
Cdd:PHA03247 2693 GSLTSLADPPPPPPTpepaphalvsatPLPPGPAAARQASPALPAAPAPPAVPagPATPGGPARPARPPTTAGPPAPAPP 2772
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 85 TEPTTPIDPGTPVEPTEPSEPTEPSQPTePTTPSEPEKPVTPEQPKEPTQ--------PVIPEKPAEPETPKTPEQPTKP 156
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPAaspagplpPPTSAQPTAPPPPPGPPPPSLP 2851
|
170 180
....*....|....*....|....*..
gi 498401131 157 IDVVVTPSGEIDK--TNQSAGTQPSIP 181
Cdd:PHA03247 2852 LGGSVAPGGDVRRrpPSRSPAAKPAAP 2878
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
36-156 |
1.13e-11 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 65.10 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 36 PPITEPTDSSEPTNPTEPVDPAEPPVIPTN----------------------------------------------PTEP 69
Cdd:PTZ00449 497 APIEEEDSDKHDEPPEGPEASGLPPKAPGDkegeegehedskesdepkeggkpgetkegevgkkpgpakehkpskiPTLS 576
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 70 SKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKT 149
Cdd:PTZ00449 577 KKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKS 656
|
....*..
gi 498401131 150 PEQPTKP 156
Cdd:PTZ00449 657 PKPPKSP 663
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
29-205 |
1.24e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 64.96 E-value: 1.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEP-TDSSEPTNPTEPVDPAEPPVIPTNPTEPSkptepttpSEPEKPTEPTTPIDPGTPVEPTEPSEPTE 107
Cdd:PHA03247 2682 RPRRRAARPTVGSlTSLADPPPPPPTPEPAPHALVSATPLPPG--------PAAARQASPALPAAPAPPAVPAGPATPGG 2753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 108 PSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPT--KPIDVVVTPSGEIDKTNQSAGTQPSIPIETS 185
Cdd:PHA03247 2754 PARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwDPADPPAAVLAPAAALPPAASPAGPLPPPTS 2833
|
170 180
....*....|....*....|
gi 498401131 186 NLAEVTHVPSETTPITTEAG 205
Cdd:PHA03247 2834 AQPTAPPPPPGPPPPSLPLG 2853
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
30-175 |
1.97e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.49 E-value: 1.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPT-EPTTPSEPEKPTEPTTP----IDPGTPV--EPTEP 102
Cdd:PHA03247 2790 SLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSaQPTAPPPPPGPPPPSLPlggsVAPGGDVrrRPPSR 2869
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 103 SEPTEPSQPTEP---------TTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQS 173
Cdd:PHA03247 2870 SPAAKPAAPARPpvrrlarpaVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949
|
..
gi 498401131 174 AG 175
Cdd:PHA03247 2950 AG 2951
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
29-156 |
2.06e-10 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 61.24 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPiTEPTDSSEPTNPTEPVDPAEPPVIPTNPTEpSKPTEPTTPSEPEKPTEPTT-PIDPGTPVEPTEPSEPTE 107
Cdd:PTZ00449 513 GPEASGLPP-KAPGDKEGEEGEHEDSKESDEPKEGGKPGE-TKEGEVGKKPGPAKEHKPSKiPTLSKKPEFPKDPKHPKD 590
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 498401131 108 PSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:PTZ00449 591 PEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPP 639
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
37-206 |
2.45e-10 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 60.86 E-value: 2.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 37 PITEPTDSSEPTNPTEPVDPAEP--PVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEP 114
Cdd:PTZ00449 569 PSKIPTLSKKPEFPKDPKHPKDPeePKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERP 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 115 TTPSEPEKPVTPEQPKEPTQPVIPEK------------------------------------------------PAEPET 146
Cdd:PTZ00449 649 EGPKIIKSPKPPKSPKPPFDPKFKEKfyddyldaaaksketkttvvldesfesilketlpetpgtpfttprplpPKLPRD 728
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 147 PKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVTHVPSETTPITTEAGE 206
Cdd:PTZ00449 729 EEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGE 788
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
17-202 |
3.04e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 3.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 17 GGGSITAFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPT-TPIDPGT 95
Cdd:PHA03247 2640 PHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPApHALVSAT 2719
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 96 PVEP----TEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEI---- 167
Cdd:PHA03247 2720 PLPPgpaaARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESReslp 2799
|
170 180 190
....*....|....*....|....*....|....*...
gi 498401131 168 ---DKTNQSAGTQPSIPIETSNLAEVTHVPSETTPITT 202
Cdd:PHA03247 2800 spwDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPT 2837
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
21-165 |
8.53e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 8.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 21 ITAFADDLGPTDPATPPITEPTDS--SEPTNPTEPVDPAEPP---VIPTNPTEPSKPTEPtTPSEPEKPTEPTTPIDPGT 95
Cdd:PHA03247 2811 VLAPAAALPPAASPAGPLPPPTSAqpTAPPPPPGPPPPSLPLggsVAPGGDVRRRPPSRS-PAAKPAAPARPPVRRLARP 2889
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 96 PVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPaePETPKTPEQPTKPIDVVVTPSG 165
Cdd:PHA03247 2890 AVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPPLAPTTDPAGAGEPSG 2957
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
37-221 |
3.37e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 54.28 E-value: 3.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 37 PITEPTDSSEPTNPTEPVDPAEPPViptnptepskPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTT 116
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVV----------AEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETT 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 117 PSEPEKPVTPEQPK---EPTQPVIPEKPAEPEtPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVTHV 193
Cdd:PRK10811 916 HPEVIAAPVTEQPQvitESDVAVAQEVAEHAE-PVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV 994
|
170 180 190
....*....|....*....|....*....|.
gi 498401131 194 PSETTPITTEAGEEIVaVDKGV---PLTKTP 221
Cdd:PRK10811 995 TAVEPEVAPAQVPEAT-VEHNHataPMTRAP 1024
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
29-164 |
9.32e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 9.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDP-----AEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPS 103
Cdd:PHA03247 2854 GSVAPGGDVRRRPPSRSPAAKPAAPARPpvrrlARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP 2933
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498401131 104 E-PTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPS 164
Cdd:PHA03247 2934 PpPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPP 2995
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
30-151 |
1.25e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.56 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPtdSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPS 109
Cdd:PRK07994 400 PPPPASAPQQAP--AVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKE 477
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 498401131 110 QPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPE 151
Cdd:PRK07994 478 AYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAE 519
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
30-236 |
2.17e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.25 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDSSEPTNPTEP-VDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPID---------------- 92
Cdd:PHA03247 2618 PPDTHAPDPPPPSPSPAANEPDPHpPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQrprrraarptvgslts 2697
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 93 ----PGTPVEPTEPSEPTEPSQPTEPTTPS----EPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPS 164
Cdd:PHA03247 2698 ladpPPPPPTPEPAPHALVSATPLPPGPAAarqaSPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA 2777
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498401131 165 GEIDKTNQSAGTQPSIPIETSNLAEVTHVPSETTPITTEAGEEIVAVDKGVPLTKTPEGLKPISSSYKVLPS 236
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPS 2849
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
29-205 |
3.71e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.23 E-value: 3.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPP-ITEPTDSSEPTNPTEPVDPAEP-----------PVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTP 96
Cdd:PTZ00449 581 FPKDPKHPKdPEEPKKPKRPRSAQRPTRPKSPklpelldipksPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPP 660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 97 VEPTEPSEPT---------------------------------EPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAE 143
Cdd:PTZ00449 661 KSPKPPFDPKfkekfyddyldaaaksketkttvvldesfesilKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGDPD 740
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 144 PETPKTPEQPTKPIDVVV------------------------------------TPSGEIDKTNQSAGTQPSIPIETSNL 187
Cdd:PTZ00449 741 AEQPDDIEFFTPPEEERTffhetpadtplpdilaeefkeedihaetgepdeamkRPDSPSEHEDKPPGDHPSLPKKRHRL 820
|
250
....*....|....*...
gi 498401131 188 AEVThvpSETTPITTEAG 205
Cdd:PTZ00449 821 DGLA---LSTTDLESDAG 835
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
30-150 |
1.44e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 49.27 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNP-------TEPSKPTEPTTPSEPEKPTEPTTPIDPGTP-VEPTE 101
Cdd:PRK10811 881 PVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPeviaapvTEQPQVITESDVAVAQEVAEHAEPVVEPQDeTADIE 960
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 498401131 102 PSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTP 150
Cdd:PRK10811 961 EAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA 1009
|
|
| Streccoc_I_II |
NF033804 |
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ... |
30-100 |
2.07e-06 |
|
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.
Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 49.17 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPA-TPPITEPTDSSEPTNPTE------PVDPA-----EPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPV 97
Cdd:NF033804 904 PTPPVkTPDQPEPSKPEEPTYETEkplepaPVAPSyenepTPPVKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTPPA 983
|
...
gi 498401131 98 EPT 100
Cdd:NF033804 984 VPT 986
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
34-163 |
2.13e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.88 E-value: 2.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 34 ATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKP-TEPTTPIDPGT---PVEPTEPSEPTEPS 109
Cdd:PRK10811 873 VPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDvavAQEVAEHAEPVVEP 952
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 498401131 110 QPTE----PTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTP 163
Cdd:PRK10811 953 QDETadieEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEAT 1010
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
32-130 |
4.31e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.88 E-value: 4.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 32 DPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPveptEPSEPTEPSQP 111
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTP----ESAPKLTRAAI 436
|
90
....*....|....*....
gi 498401131 112 TEPTTPSEPEKPVTPEQPK 130
Cdd:PRK14950 437 PVDEKPKYTPPAPPKEEEK 455
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
82-149 |
4.46e-06 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 47.70 E-value: 4.46e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 498401131 82 EKPTEPTTPIDPGTPVEPT-EPSEPTEPSQPTEPTTP--SEPEKPVTPEQPKEPTQ--PVIPEKPAEPETPKT 149
Cdd:NF033838 414 EKPAEQPQPAPAPQPEKPApKPEKPAEQPKAEKPADQqaEEDYARRSEEEYNRLTQqqPPKTEKPAQPSTPKT 486
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
58-152 |
8.67e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 46.73 E-value: 8.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 58 EPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVI 137
Cdd:PRK14950 357 EALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAI 436
|
90
....*....|....*..
gi 498401131 138 P--EKPAEPETPKTPEQ 152
Cdd:PRK14950 437 PvdEKPKYTPPAPPKEE 453
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
66-186 |
1.19e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 46.31 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 66 PTEPSKPTEPTTpSEPEKPTEPTTPIDPGtpVEPTEPSEPTEPSQPtEPTTPSEPEKPVTPEQPKEPtQPVIPEKPAEPE 145
Cdd:PRK14971 372 GRGPKQHIKPVF-TQPAAAPQPSAAAAAS--PSPSQSSAAAQPSAP-QSATQPAGTPPTVSVDPPAA-VPVNPPSTAPQA 446
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 498401131 146 TPKTPEQPTKPIDVVVTPSGEI-------DKTNQSAGTQPSIPIETSN 186
Cdd:PRK14971 447 VRPAQFKEEKKIPVSKVSSLGPstlrpiqEKAEQATGNIKEAPTGTQK 494
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
64-166 |
1.21e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 64 TNPTEPSKPTEPTTPSEPEKPTEPTTPidpgTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAe 143
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAA----AAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPA- 339
|
90 100
....*....|....*....|...
gi 498401131 144 PETPKTPEQPTKPIDVVVTPSGE 166
Cdd:COG3266 340 PEAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
30-164 |
1.24e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKP-----TEPTTPIDPGTPVEPTEPSE 104
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllaaRQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 498401131 105 PTEP---SQPTEPTTPSEPEKPVTPEQP-KEPTQPVIPEKPAEPETPK--TPEQPTKPIDVVVTPS 164
Cdd:PRK07994 446 ASRArpvNSALERLASVRPAPSALEKAPaKKEAYRWKATNPVEVKKEPvaTPKALKKALEHEKTPE 511
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
25-156 |
1.76e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 25 ADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEP-TEPS 103
Cdd:PHA03247 2545 SDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPdTHAP 2624
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 498401131 104 EPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIP--EKPAEPETPKTPEQPTKP 156
Cdd:PHA03247 2625 DPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGrvSRPRRARRLGRAAQASSP 2679
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
50-206 |
1.86e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 50 PTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEP--SEPTEPSQPTEPTTPSEPEKPVTPE 127
Cdd:PRK07994 368 PEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqlLAARQQLQRAQGATKAKKSEPAAAS 447
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498401131 128 QPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTqpsiPIETSNLAEVTHVPSETTPITTEAGE 206
Cdd:PRK07994 448 RARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVAT----PKALKKALEHEKTPELAAKLAAEAIE 522
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
25-158 |
2.01e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 25 ADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPS--------EPEKPTEPTTPIDPGTP 96
Cdd:PRK07994 367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllaarqqlQRAQGATKAKKSEPAAA 446
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498401131 97 VEPTEPSEPTEPS---QPTEPTTPSEPEKPVTP---EQPKEPTQPVIPEKPAEP----ETPKTPEQPTKPID 158
Cdd:PRK07994 447 SRARPVNSALERLasvRPAPSALEKAPAKKEAYrwkATNPVEVKKEPVATPKALkkalEHEKTPELAAKLAA 518
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
34-112 |
2.32e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.34 E-value: 2.32e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498401131 34 ATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPtEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPT 112
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQ-AATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPS 438
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
41-159 |
2.94e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 41 PTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEP 120
Cdd:PRK07764 393 APAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAA 472
|
90 100 110
....*....|....*....|....*....|....*....
gi 498401131 121 ekPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDV 159
Cdd:PRK07764 473 --APEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDA 509
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
31-135 |
3.21e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 3.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 31 TDPATPPITEPTDSSEPTNPTEPVDP--AEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTpidPGTPVEPTEPSEPTEP 108
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDErdAQPPADSGSASAPASDAPPDAAFEPAPRAAAPS---AATPAAVPDARAPAAA 516
|
90 100
....*....|....*....|....*..
gi 498401131 109 SQPTEPTTPSEPEKPVTPEQPKEPTQP 135
Cdd:PRK07003 517 SREDAPAAAAPPAPEARPPTPAAAAPA 543
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
27-208 |
3.78e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 27 DLGPTDPATPPITEPTDSseptnptepvdPAEPPVIPTNPTEPSKPTEPttPSEPEKPTEPTTPidpgtpveptePSEPT 106
Cdd:PRK10263 737 DDGPHEPLFTPIVEPVQQ-----------PQQPVAPQQQYQQPQQPVAP--QPQYQQPQQPVAP-----------QPQYQ 792
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 107 EPSQPTEPTTP-SEPEKPVTPE-QPKEPTQPVIPEKP-AEPETPKTPEQPTKPIDVVVTPSGEIDKTNqsagtQPSIPIE 183
Cdd:PRK10263 793 QPQQPVAPQPQyQQPQQPVAPQpQYQQPQQPVAPQPQyQQPQQPVAPQPQDTLLHPLLMRNGDSRPLH-----KPTTPLP 867
|
170 180
....*....|....*....|....*
gi 498401131 184 TSNLaeVTHVPSETTPITTEAGEEI 208
Cdd:PRK10263 868 SLDL--LTPPPSEVEPVDTFALEQM 890
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
33-151 |
4.27e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.71 E-value: 4.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 33 PATPPITEPTDSSEPTNPTEPVdPAEPPviptnPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPT 112
Cdd:PRK14951 381 PARPEAAAPAAAPVAQAAAAPA-PAAAP-----AAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQ 454
|
90 100 110
....*....|....*....|....*....|....*....
gi 498401131 113 EPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPE 151
Cdd:PRK14951 455 AAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
38-128 |
4.74e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 44.79 E-value: 4.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 38 ITEPTDSSEPTNPtEPVDPAEP-PVIPtNPTEPSkPTEPTTPSepekPTEPtTPIDPgTPVEPtEPSEPTEPSqPTEPTT 116
Cdd:PRK15313 554 LTSYIEPDEPIIP-DPVDPVIPdPVIP-DPVDPD-PVDPVIPD----PVIP-DPVDP-DPVDP-EPVDPVIPD-PTIPDI 622
|
90
....*....|..
gi 498401131 117 PSEPEKPVTPEQ 128
Cdd:PRK15313 623 GQSDTPPITEHQ 634
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
30-230 |
5.98e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 5.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPI-TEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPG-----------TPV 97
Cdd:PHA03247 2592 PPQSARPRApVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPApgrvsrprrarRLG 2671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 98 EPTEPSEPTE--------------------PSQPTEPTTPSEPEKPVTPEQP-------KEPTQPVIPEKPAEPETPKTP 150
Cdd:PHA03247 2672 RAAQASSPPQrprrraarptvgsltsladpPPPPPTPEPAPHALVSATPLPPgpaaarqASPALPAAPAPPAVPAGPATP 2751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 151 EQPTKPIDVVVT--PSGEIDKTNQSAGTQPSIPIETSNLAEVTHVPSETTPITTEAGEEIVAVDKGVPLTKTPEGLKPIS 228
Cdd:PHA03247 2752 GGPARPARPPTTagPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831
|
..
gi 498401131 229 SS 230
Cdd:PHA03247 2832 TS 2833
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
36-167 |
6.17e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 44.33 E-value: 6.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 36 PPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPeKPTEPTTPIDPGTPVEPTEP-SEPTEPSQ-PTE 113
Cdd:PRK14949 653 PPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAP-APPPVPDPYDRPPWEEAPEVaSANDGPNNaAEG 731
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498401131 114 PTTPSEPEKPVTPEQPKEP---TQPVIPEKPAEPETPKTPEQPTKPI-----DVVVTPSGEI 167
Cdd:PRK14949 732 NLSESVEDASNSELQAVEQqatHQPQVQAEAQSPASTTALTQTSSEVqdtelNLVLLSSGSI 793
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
17-153 |
8.28e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 8.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 17 GGGSITAFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPP-VIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGT 95
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPaAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 498401131 96 PVEPTePSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQP 153
Cdd:PRK12323 447 APAPA-PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELP 503
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
87-155 |
8.32e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 8.32e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498401131 87 PTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTK 155
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPK 430
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
29-120 |
9.08e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.68 E-value: 9.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEP 108
Cdd:PRK07003 446 DAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
|
90
....*....|..
gi 498401131 109 SQPTEPTTPSEP 120
Cdd:PRK07003 526 APPAPEARPPTP 537
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
29-156 |
9.41e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.68 E-value: 9.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPT--EPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPT 106
Cdd:PRK07003 405 AAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAAdgDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDA 484
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 498401131 107 EPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:PRK07003 485 PPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARP 534
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
41-164 |
9.80e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.61 E-value: 9.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 41 PTDSSEPTNP--TEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEkptepttpidPGTPVEPTEPSEPTEPSQPTEPTTPS 118
Cdd:PRK14971 372 GRGPKQHIKPvfTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQ----------SATQPAGTPPTVSVDPPAAVPVNPPS 441
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 498401131 119 EPEKPVTPEQPKEPTQPVIPEKPAEPETPKTP-----EQPTKPIDVVVTPS 164
Cdd:PRK14971 442 TAPQAVRPAQFKEEKKIPVSKVSSLGPSTLRPiqekaEQATGNIKEAPTGT 492
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
68-222 |
1.18e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 68 EPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETP 147
Cdd:PRK07994 367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498401131 148 KTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVTHVPsETTPitteageeiVAVDKGVPLTKTPE 222
Cdd:PRK07994 447 SRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEP-VATP---------KALKKALEHEKTPE 511
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
25-166 |
1.23e-04 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442349 [Multi-domain] Cd Length: 298 Bit Score: 42.76 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 25 ADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPViptnptepskptepTTPSEPEKPTEPTTPIDPGTPVEPTEPSE 104
Cdd:COG3115 44 LLDDDGIGEVRVVAAEAPERVEPEASFDAEDEVREPD--------------QEEVDPLLDDEADIEAAPAEPVRWAGTAA 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 498401131 105 PTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIdV--VVTPSGE 166
Cdd:COG3115 110 AVEPAPEQEAYEEAGPAGESAEQEDAPAEEPEAEAPAEEALAAELCAEPEEVI-VlnVVAREGQ 172
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
47-145 |
1.43e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 47 PTNPTEPVDPAEPPVIPTnptepskPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPteptTPSEPEKPVTP 126
Cdd:PRK14950 365 APQPAKPTAAAPSPVRPT-------PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVP----HTPESAPKLTR 433
|
90
....*....|....*....
gi 498401131 127 EQPKEPTQPVIPEKPAEPE 145
Cdd:PRK14950 434 AAIPVDEKPKYTPPAPPKE 452
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
29-156 |
1.45e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.39 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNP--------------TEPSKPTEPTTPSEPEKPTEPTTPidpg 94
Cdd:PHA03247 2494 AAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmltwirgleelasDDAGDPPPPLPPAAPPAAPDRSVP---- 2569
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498401131 95 TPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
36-210 |
1.56e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 43.10 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 36 PPITEPTDSSEPTNPTEPVDPAEPpvIPTNPTEPSKPTEPTTPSEPEKPT----EPTTPIDPGTPVePTEPSEPTEPSQP 111
Cdd:PRK10811 861 AEEVQVQPVVAEVPVAAAVEPVVS--APVVEAVAEVVEEPVVVAEPQPEEvvvvETTHPEVIAAPV-TEQPQVITESDVA 937
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 112 TEPTTPSEPEkPVTPEQPKEptQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVT 191
Cdd:PRK10811 938 VAQEVAEHAE-PVVEPQDET--ADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHN 1014
|
170
....*....|....*....
gi 498401131 192 HVpseTTPITTEAGEEIVA 210
Cdd:PRK10811 1015 HA---TAPMTRAPAPEYVP 1030
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
29-110 |
1.57e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKP--TEPTTPIDPGTPVEPTEPSEPT 106
Cdd:PRK14950 370 KPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPesAPKLTRAAIPVDEKPKYTPPAP 449
|
....
gi 498401131 107 EPSQ 110
Cdd:PRK14950 450 PKEE 453
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
54-156 |
1.70e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 54 VDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDP---GTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPK 130
Cdd:PRK07764 588 VGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPapaGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667
|
90 100
....*....|....*....|....*.
gi 498401131 131 EPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAAPAAP 693
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
24-117 |
1.90e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.96 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 24 FADDLGPTDPATPpitepTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTePTTPSEPEKPTEPTTPIDPGTPVEPTEPS 103
Cdd:PRK12270 32 FFADYGPGSTAAP-----TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-AAAPAAPPKPAAAAAAAAAPAAPPAAAAA 105
|
90
....*....|....
gi 498401131 104 EPTEPSQPTEPTTP 117
Cdd:PRK12270 106 AAPAAAAVEDEVTP 119
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
33-154 |
2.43e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 33 PATPPITEPTDSSEPTNPTEPVDPAEPPVipTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPT 112
Cdd:PRK07003 419 AATRAEAPPAAPAPPATADRGDDAADGDA--PVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRA 496
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 498401131 113 EPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPT 154
Cdd:PRK07003 497 AAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPA 538
|
|
| Amelogenin |
smart00818 |
Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth; They seem ... |
53-158 |
2.55e-04 |
|
Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth; They seem to regulate formation of crystallites during the secretory stage of tooth enamel development and are thought to play a major role in the structural organisation and mineralisation of developing enamel. The extracellular matrix of the developing enamel comprises two major classes of protein: the hydrophobic amelogenins and the acidic enamelins. Circular dichroism studies of porcine amelogenin have shown that the protein consists of 3 discrete folding units: the N-terminal region appears to contain beta-strand structures, while the C-terminal region displays characteristics of a random coil conformation. Subsequent studies on the bovine protein have indicated the amelogenin structure to contain a repetitive beta-turn segment and a "beta-spiral" between Gln112 and Leu138, which sequester a (Pro, Leu, Gln) rich region. The beta-spiral offers a probable site for interactions with Ca2+ ions. Muatations in the human amelogenin gene (AMGX) cause X-linked hypoplastic amelogenesis imperfecta, a disease characterised by defective enamel. A 9bp deletion in exon 2 of AMGX results in the loss of codons for Ile5, Leu6, Phe7 and Ala8, and replacement by a new threonine codon, disrupting the 16-residue (Met1-Ala16) amelogenin signal peptide.
Pssm-ID: 197891 [Multi-domain] Cd Length: 165 Bit Score: 40.93 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 53 PVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPveptepsEPTEPSQPTEPTTPSEPEKPVTPEQPKEP 132
Cdd:smart00818 59 PVLPAQQPVVPQQPLMPVPGQHSMTPTQHHQPNLPQPAQQPFQP-------QPLQPPQPQQPMQPQPPVHPIPPLPPQPP 131
|
90 100
....*....|....*....|....*.
gi 498401131 133 TQPVIPEKPAEPETPKTPEQPTKPID 158
Cdd:smart00818 132 LPPMFPMQPLPPLLPDLPLEAWPATD 157
|
|
| Agg_substance |
NF033875 |
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ... |
56-196 |
2.65e-04 |
|
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.
Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 42.39 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 56 PAEPPVIPTNPTEPSKPTEPTTPSEPE---------KPT--EPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKP- 123
Cdd:NF033875 50 PGTTTVQPDNPDPQSGSETPKTAVSEEatvqkdttsQPTkvEEVASEKNGAEQSSATPNDTTNAQQPTVGAEKSAQEQPv 129
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 498401131 124 VTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKpidvVVTPsgEIDKTNQSAGTQPSIPIETSNLAEVTHVPSE 196
Cdd:NF033875 130 VSPETTNEPLGQPTEVAPAENEANKSTSIPKE----FETP--DVDKAVDEAKKDPNITVVEKPAEDLGNVSSK 196
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
34-133 |
2.89e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.14 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 34 ATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPsqptE 113
Cdd:COG3266 264 ASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAP----A 339
|
90 100
....*....|....*....|
gi 498401131 114 PTTPSEPEKPVTPEQPKEPT 133
Cdd:COG3266 340 PEAAAAAAAPAAPAVAKKLA 359
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
53-156 |
3.78e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 40.76 E-value: 3.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 53 PVDPAEPPVIPtnptePSKPTEPTTPSEPEKpTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEP 132
Cdd:PRK11633 47 PGDRDEPDMMP-----AATQALPTQPPEGAA-EAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|....
gi 498401131 133 TQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:PRK11633 121 PQQKVEAPPAPKPEPKPVVEEKAA 144
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
7-116 |
3.80e-04 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 41.76 E-value: 3.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 7 SSLFSAVLVFGGGS-ITAFADDLGPTDPATPPITEPTDSSEpTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPT 85
Cdd:PRK11907 9 SAVALTLALLTASNpKLAQAEEIVTTTPATSTEAEQTTPVE-SDATEEADNTETPVAATTAAEAPSSSETAETSDPTSEA 87
|
90 100 110
....*....|....*....|....*....|.
gi 498401131 86 EPTTpidpgTPVEPTEPSEPTEPSQPTEPTT 116
Cdd:PRK11907 88 TDTT-----TSEARTVTPAATETSKPVEGQT 113
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
19-160 |
4.69e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 4.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 19 GSITAFADDLGPTDPATPPITEptdSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVE 98
Cdd:PHA03307 38 GSQGQLVSDSAELAAVTVVAGA---AACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSP 114
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498401131 99 PTEPSEPTEPS-QPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKP--AEPETPKTPEQPTKPIDVV 160
Cdd:PHA03307 115 DPPPPTPPPASpPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASpaAVASDAASSRQAALPLSSP 179
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
33-158 |
4.83e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 41.49 E-value: 4.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 33 PATPPITEPTDSSEPTNPTEPV-DPAEPPVIPTNPTEPSKPTEP-----------TTPSEPEKPTEPTTPIDPGTPVEPT 100
Cdd:PTZ00441 292 PAPVPPTPEDDNPRPTDDEFAVpNFNEGLDVPDNPQDPVPPPNEgkdgnpneenlFPPGDDEVPDESNVPPNPPNVPGGS 371
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 101 EPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPviPEKPAEPETPKTP--EQPTKPID 158
Cdd:PTZ00441 372 NSEFSSDVENPPNPPNPDIPEQEPNIPEDSNKEVP--EDVPMEPEDDRDNnfNEPKKPEN 429
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
39-128 |
7.11e-04 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 39 TEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEkpTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPS 118
Cdd:NF041121 15 MGRAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPE--PAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVR 92
|
90
....*....|
gi 498401131 119 EPEKPVTPEQ 128
Cdd:NF041121 93 VPAPPALPNP 102
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
30-153 |
7.26e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 40.72 E-value: 7.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDSS-EPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTpIDPGTPVEPTEPSEPTEP 108
Cdd:PTZ00441 283 PVEPEPLPVPAPVPPTpEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNE-ENLFPPGDDEVPDESNVP 361
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 498401131 109 SQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQP 153
Cdd:PTZ00441 362 PNPPNVPGGSNSEFSSDVENPPNPPNPDIPEQEPNIPEDSNKEVP 406
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
31-153 |
8.89e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.74 E-value: 8.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 31 TDPATPPITEPTDSSEPTNPTEPVDPAEPPViPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQ 110
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAA-PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDG 668
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 498401131 111 PTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQP 153
Cdd:PRK07764 669 WPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPA 711
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
23-199 |
9.55e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.84 E-value: 9.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 23 AFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEP-TTPIDPGTP-VEPT 100
Cdd:PRK10263 332 SWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPlQQPVQPQQPyYAPA 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 101 EPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIdvvvtpsgeIDKTNQSAGTQPSI 180
Cdd:PRK10263 412 AEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTY---------QQPAAQEPLYQQPQ 482
|
170
....*....|....*....
gi 498401131 181 PIETSNLAEVTHVPSETTP 199
Cdd:PRK10263 483 PVEQQPVVEPEPVVEETKP 501
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
93-163 |
1.03e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.28 E-value: 1.03e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498401131 93 PGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPvipEKPAEPETPKtPEQPTKPIDVVVTP 163
Cdd:PRK01297 16 QPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKK---DKPRRERKPK-PASLWKLEDFVVEP 82
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
33-226 |
1.04e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.45 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 33 PATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPT--EPTTPSEPEKPTEPTTPIDPGTP-VEPTEPSEPTEPS 109
Cdd:PRK10263 402 QPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVagNAWQAEEQQSTFAPQSTYQTEQTyQQPAAQEPLYQQP 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 110 QPTEPTTPSEPEKPVTPEQPKEPtqPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGE--IDKTNQSAGTQPSIPIETSNL 187
Cdd:PRK10263 482 QPVEQQPVVEPEPVVEETKPARP--PLYYFEEVEEKRAREREQLAAWYQPIPEPVKEpePIKSSLKAPSVAAVPPVEAAA 559
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 498401131 188 A------EVTHVPSETTPITTEAGEEIVAVDKGVPLTKTPEGLKP 226
Cdd:PRK10263 560 AvsplasGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGP 604
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
82-153 |
1.09e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 1.09e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498401131 82 EKPTEPTTPIDPgtpvePTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTqPVIPEKPAEPETPKTPEQP 153
Cdd:COG5373 39 EAAEAASAPAEP-----EPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPA-PAAAAPPAEAEPAAAPAAA 104
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
30-153 |
1.15e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 40.48 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDS------SEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEP--EKPTE----PTTPIDPGT-P 96
Cdd:PRK14949 653 PPASLSKPASSPDASqtsasfDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDRPpwEEAPEvasaNDGPNNAAEgN 732
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 97 VEPTEPSEPTEPSQPTEPTTPSEPEKPVT---PEQPKEPTQPVIPEKPAEPETPKTPEQP 153
Cdd:PRK14949 733 LSESVEDASNSELQAVEQQATHQPQVQAEaqsPASTTALTQTSSEVQDTELNLVLLSSGS 792
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
50-156 |
1.15e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.35 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 50 PTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQP 129
Cdd:PRK07764 599 GPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAP 678
|
90 100
....*....|....*....|....*..
gi 498401131 130 KEPTQPVIPEKPAEPETPKTPEQPTKP 156
Cdd:PRK07764 679 AAPPPAPAPAAPAAPAGAAPAQPAPAP 705
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
34-142 |
1.24e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.22 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 34 ATPPITEPTDSSEP--TNPTEPVDPAEPPviPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQP 111
Cdd:PRK11633 40 AIPLVPKPGDRDEPdmMPAATQALPTQPP--EGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKP 117
|
90 100 110
....*....|....*....|....*....|.
gi 498401131 112 TepttPSEPEKPVTPEQPKEPTQPVIPEKPA 142
Cdd:PRK11633 118 K----PKPQQKVEAPPAPKPEPKPVVEEKAA 144
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
18-147 |
1.29e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 39.96 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 18 GGSITAFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPViPTNPTEPSKPTEPTTPSEPEKPTEPTTPiDPGTPV 97
Cdd:PRK13108 319 GPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIEREQPGDLAGQAPAAHQVD-AEAASA 396
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 498401131 98 EPTEPSEptEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETP 147
Cdd:PRK13108 397 APEEPAA--LASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEP 444
|
|
| PHA02030 |
PHA02030 |
hypothetical protein |
47-150 |
1.51e-03 |
|
hypothetical protein
Pssm-ID: 222843 [Multi-domain] Cd Length: 336 Bit Score: 39.58 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 47 PTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPveptEPSEPTEPSQPTEPTTPSEPEKPvtp 126
Cdd:PHA02030 239 PGSALHILLGGGEDLIIKPKSKAAGSNLPAVPNVAADAGSAAAPAVPAAA----AAVAQAAPSVPQVPNVAVLPDVP--- 311
|
90 100
....*....|....*....|....
gi 498401131 127 eQPKEPTQPVIPEKPAEPETPKTP 150
Cdd:PHA02030 312 -QVAPVAAPAAPEVPAVPVVPAAP 334
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
97-198 |
1.71e-03 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 39.68 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 97 VEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTqpVIPEKPAEPETPKTPEQPTKPIDVVVTPSGE-IDKTNQSAG 175
Cdd:PRK06347 50 VSADETAPADEASKSAEANTTKEAPATATPENTTEPT--VEPKQTETKEQTKTPEEKQPAAKQVEKAPAEpATVSNPDNA 127
|
90 100
....*....|....*....|...
gi 498401131 176 TQPSIPiETSNLAEVTHVPSETT 198
Cdd:PRK06347 128 TSSSTP-ATYNLLQKSALRSGAT 149
|
|
| Gram_pos_anchor |
pfam00746 |
LPXTG cell wall anchor motif; |
243-274 |
1.77e-03 |
|
LPXTG cell wall anchor motif;
Pssm-ID: 366278 [Multi-domain] Cd Length: 43 Bit Score: 35.59 E-value: 1.77e-03
10 20 30
....*....|....*....|....*....|..
gi 498401131 243 ASDGKMKVLPHTGEKFTLLFSVLGSFFVLISG 274
Cdd:pfam00746 1 AKKSKKKTLPKTGENSNIFLTAAGLLALLGGL 32
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
29-207 |
1.95e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTnPTEPSKPTEPTTPSEPEKPTEPTTPIDP-------GTPVEPTE 101
Cdd:PRK07764 597 GEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGA-AAAPAEASAAPAPGVAAPEHHPKHVAVPdasdggdGWPAKAGG 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 102 PSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPI----DVVVTPSGEIDKTNQSAGTQ 177
Cdd:PRK07764 676 AAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPspaaDDPVPLPPEPDDPPDPAGAP 755
|
170 180 190
....*....|....*....|....*....|
gi 498401131 178 PSIPIETSNlAEVTHVPSETTPITTEAGEE 207
Cdd:PRK07764 756 AQPPPPPAP-APAAAPAAAPPPSPPSEEEE 784
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
32-143 |
2.07e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 39.45 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 32 DPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTepsqp 111
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDAR----- 511
|
90 100 110
....*....|....*....|....*....|..
gi 498401131 112 teptTPSEPEKPVTPEQPKEPTQPVIPEKPAE 143
Cdd:PRK07003 512 ----APAAASREDAPAAAAPPAPEARPPTPAA 539
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
33-151 |
2.41e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.17 E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 33 PATPPITEPTDSSEPTNptEPVDPAEPPVIPT-NPTEPSKPTEPTTPSEPEKPTEPTTPidpgtPVEPTEPSEPTEPSQP 111
Cdd:PHA03291 167 PAEGTLAAPPLGEGSAD--GSCDPALPLSAPRlGPADVFVPATPRPTPRTTASPETTPT-----PSTTTSPPSTTIPAPS 239
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 498401131 112 TEPTTPSEPEKPVTPEQPKEPTqPVIPEKPAEPETPKTPE 151
Cdd:PHA03291 240 TTIAAPQAGTTPEAEGTPAPPT-PGGGEAPPANATPAPEA 278
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
30-138 |
2.43e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.54 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 30 PTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPS 109
Cdd:PHA03247 2894 STESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVA 2973
|
90 100
....*....|....*....|....*....
gi 498401131 110 QPTEPTTPSEPEKPVTPEQPKEPTQPVIP 138
Cdd:PHA03247 2974 VPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
29-125 |
2.48e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.17 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATP---PITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTP---SEPEKPTEPTTPIDPGTPVEPTEP 102
Cdd:PHA03291 184 GSCDPALPlsaPRLGPADVFVPATPRPTPRTTASPETTPTPSTTTSPPSTTIPapsTTIAAPQAGTTPEAEGTPAPPTPG 263
|
90 100
....*....|....*....|...
gi 498401131 103 SEPTEPSQPTEPTTPSEPEKPVT 125
Cdd:PHA03291 264 GGEAPPANATPAPEASRYELTVT 286
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
45-250 |
2.49e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 39.14 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 45 SEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPT-EPTTPSEPEKP 123
Cdd:PLN03209 325 SQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSsSPASSKSVDAV 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 124 VTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVTHVPsETTPITTE 203
Cdd:PLN03209 405 AKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVP-DTAPATAA 483
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 498401131 204 AGEEIVAVDKGVPLTKTP--EGLKPISSSYKVLPSGNVEVKASDGKMKV 250
Cdd:PLN03209 484 TDAAAPPPANMRPLSPYAvyDDLKPPTSPSPAAPVGKVAPSSTNEVVKV 532
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
53-142 |
3.20e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 38.68 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 53 PVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEqPKEP 132
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPA-PEAA 343
|
90
....*....|
gi 498401131 133 TQPVIPEKPA 142
Cdd:COG3266 344 AAAAAPAAPA 353
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
17-155 |
3.25e-03 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 38.79 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 17 GGGSITAFADD----LGPTDPATPPiteptdsseptnpTEPVDPAEPPVIPTNptePSKPTEPTTPSEPEKPTEPTTPID 92
Cdd:PRK06995 36 GGVEIVALADSdlaaLAPPAAAAPA-------------AAQPPPAAAPAAVSR---PAAPAAEPAPWLVEHAKRLTAQRE 99
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 498401131 93 PgtpvePTEPSEPTEPSQPTEPTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTK 155
Cdd:PRK06995 100 Q-----LVARAAAPAAPEAQAPAAPAERAAAENAARRLARAAAAAPRPRVPADAAAAVADAVK 157
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
35-120 |
3.39e-03 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 38.91 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 35 TPPITEPTDSSEPTNPTEPvdpaeppviPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTE--PSEPTEPSQPT 112
Cdd:PRK06347 55 TAPADEASKSAEANTTKEA---------PATATPENTTEPTVEPKQTETKEQTKTPEEKQPAAKQVEkaPAEPATVSNPD 125
|
....*...
gi 498401131 113 EPTTPSEP 120
Cdd:PRK06347 126 NATSSSTP 133
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
41-167 |
4.26e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 38.54 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 41 PTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEkPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEP 120
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAP-AAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 498401131 121 EKPVTPEQPKEPTQPVIPEKPAEPETPKT-----PEQPTKPIDVVVTPSGEI 167
Cdd:PRK14951 445 VALAPAPPAQAAPETVAIPVRVAPEPAVAsaapaPAAAPAAARLTPTEEGDV 496
|
|
| PRP8 |
COG5178 |
U5 snRNP spliceosome subunit [RNA processing and modification]; |
114-257 |
4.50e-03 |
|
U5 snRNP spliceosome subunit [RNA processing and modification];
Pssm-ID: 227505 [Multi-domain] Cd Length: 2365 Bit Score: 38.81 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 114 PTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNqsagtqpsIPIETSNLAEVTHV 193
Cdd:COG5178 6 PGNPPPPPPPPGFEPPSQPPPPPPPGVNVKKRSRKQLSIVGDILGHSGNPIYSLRVSD--------KPVKLGNKAKTLHV 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 498401131 194 PSETTPItteageeivavdkgvpltkTPEGLKPISSSYKVLPSG--NVEVKASDGKMKVLPHTGEK 257
Cdd:COG5178 78 LTLKAPI-------------------PPEHLRKIQSPCSDMPSVltKVDKRSYLGALKYLPHAVLK 124
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
22-116 |
4.65e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 38.77 E-value: 4.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 22 TAFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTE 101
Cdd:PHA03247 393 TPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRK 472
|
90
....*....|....*
gi 498401131 102 PSEPTEPSQPTEPTT 116
Cdd:PHA03247 473 ALDALRERRPPEPPG 487
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
27-111 |
4.75e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 38.12 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 27 DLGPTDPATPPITEPTDSSEPTNPTEPVDPAeppviptnPTEPSKPTEPTTPSEPEKPtePTTPIDPGTPVEPTEPSEPT 106
Cdd:PTZ00144 119 DTGGAPPAAAPAAAAAAKAEKTTPEKPKAAA--------PTPEPPAASKPTPPAAAKP--PEPAPAAKPPPTPVARADPR 188
|
....*
gi 498401131 107 EPSQP 111
Cdd:PTZ00144 189 ETRVP 193
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
18-148 |
5.91e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 37.82 E-value: 5.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 18 GGSITAFAD--------DLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNP--TEPSKPTEPTTPSEPEKPTEP 87
Cdd:NF040712 174 GGTVTALDDearwlidpDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDsdPAEAGTPDDLASARRRRAGVE 253
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 88 TTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQ----PKEPTQPVIPE-----KPAEPETPK 148
Cdd:NF040712 254 QPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAAETPEAAEPpapaPAAPAAPAAPEaeepaRPEPPPAPK 323
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
29-111 |
6.11e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 37.67 E-value: 6.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 29 GPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSkpTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEP 108
Cdd:NF041121 17 RAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPE--PAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVP 94
|
...
gi 498401131 109 SQP 111
Cdd:NF041121 95 APP 97
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
71-145 |
6.30e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 38.06 E-value: 6.30e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498401131 71 KPTEPTTPSEPEKPTEPTTpidpgTPVEPTEPSEPTEPSQPTEPTTPSEPekpvTPEQPKEPTQPVIPEKPAEPE 145
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAA-----TAAAPEAAPAPVPEAPAAPPAAAEAP----APAAAAPPAEAEPAAAPAAAS 105
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
21-90 |
6.58e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 38.06 E-value: 6.58e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 21 ITAFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPtnPTEPSKPTEPTTPSEPEKPTEPTTP 90
Cdd:COG5373 37 LAEAAEAASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPPA--AAEAPAPAAAAPPAEAEPAAAPAAA 104
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
50-226 |
6.71e-03 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 37.36 E-value: 6.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 50 PTEPVDPAEPPVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPiDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQP 129
Cdd:TIGR02223 48 LTESKQANEPETLQPKNQTENGETAADLPPKPEERWSYIEE-LEAREVLINDPEEPSNGGGVEESAQLTAEQRQLLEQMQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 130 KEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSIPIETSNLAEVTHVPSETT-PITTEAGEEI 208
Cdd:TIGR02223 127 ADMRAAEKVLATAPSEQTVAVEARKQTAEKKPQKARTAEAQKTPVETEKIASKVKEAKQKQKALPKQTAeTQSNSKPIET 206
|
170
....*....|....*...
gi 498401131 209 VAVDKGVPLTKTPEGLKP 226
Cdd:TIGR02223 207 APKADKADKTKPKPKEKA 224
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
69-254 |
6.87e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 37.72 E-value: 6.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 69 PSKPTEPTTPSEPEKPTEPTTpidpgtpveptePSEPTEPSQPtepttPSEPEKPVTPEQPKEPTQPVIPEKPAepeTPK 148
Cdd:pfam05539 169 KTAVTTSKTTSWPTEVSHPTY------------PSQVTPQSQP-----ATQGHQTATANQRLSSTEPVGTQGTT---TSS 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 149 TPEQPTKPIDVVVTPSGeidkTNQSAGTQPSiPIETSNLAEVTHVPSETTPITTEAGEEIVAVDKGVPLTKTPEGLKPIS 228
Cdd:pfam05539 229 NPEPQTEPPPSQRGPSG----SPQHPPSTTS-QDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTP 303
|
170 180
....*....|....*....|....*.
gi 498401131 229 SSYKVLPSGNVEVKASDGKMKVLPHT 254
Cdd:pfam05539 304 RPTATTQSGSSPPHSSPPGVQANPTT 329
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
81-150 |
6.90e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 37.74 E-value: 6.90e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 498401131 81 PEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEPEKPVTPEQ-PKEPTQPVIPEKPAEPETPKTP 150
Cdd:PTZ00144 126 AAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPaAKPPPTPVARADPRETRVPMSR 196
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
28-145 |
6.93e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 37.83 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 28 LGPTDPATPPITEPTDSSEPTNPTEPVDPAEPPVIPTNPTEPSKPTEPTTPSepekPTEPTTPIDPGTPVEPTEPSEPTE 107
Cdd:PRK14971 384 TQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAV----PVNPPSTAPQAVRPAQFKEEKKIP 459
|
90 100 110
....*....|....*....|....*....|....*...
gi 498401131 108 PSQpTEPTTPSEpEKPVTPEQpkEPTQPVIPEKPAEPE 145
Cdd:PRK14971 460 VSK-VSSLGPST-LRPIQEKA--EQATGNIKEAPTGTQ 493
|
|
| PRK13700 |
PRK13700 |
conjugal transfer protein TraD; Provisional |
86-167 |
7.16e-03 |
|
conjugal transfer protein TraD; Provisional
Pssm-ID: 184256 [Multi-domain] Cd Length: 732 Bit Score: 37.63 E-value: 7.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 86 EPTTP-IDPGTPVEPTEPsePTEPSQPTEPTTPSEPEKPVTP--EQPKEPTQPVIPEKPAEPETPKTP-EQPTKPIDVVV 161
Cdd:PRK13700 604 EPDVPeVASGEDVTQAEQ--PQQPQQPQQPQQPQQPQQPVSPviNDKKSDAGVNVPAGGIEQELKMKPeEEMEQQLPPGI 681
|
....*.
gi 498401131 162 TPSGEI 167
Cdd:PRK13700 682 SESGEV 687
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
25-181 |
7.64e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 37.91 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 25 ADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEP--------PVIPTNPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTP 96
Cdd:PRK07003 458 SADSRCDERDAQPPADSGSASAPASDAPPDAAFEPapraaapsAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTP 537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498401131 97 VEPTEPSEPTEPSQPTE-----PTTPSEPEKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTN 171
Cdd:PRK07003 538 AAAAPAARAGGAAAALDvlrnaGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAE 617
|
170
....*....|
gi 498401131 172 QSAGTQPSIP 181
Cdd:PRK07003 618 QAAESRGAPP 627
|
|
| |
