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Conserved domains on  [gi|499188870|ref|WP_010886410|]
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MULTISPECIES: Fur-regulated basic protein FbpB [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fur_reg_FbpB NF033227
Fur-regulated basic protein FbpB; This model describes FbpB (Fur-regulated basic protein B), ...
 12-54 2.56e-15

Fur-regulated basic protein FbpB; This model describes FbpB (Fur-regulated basic protein B), one of three paralogous small proteins recognized by Pfam model PF13040 in Bacillus subtilis.


:

Pssm-ID: 380223  Cd Length: 43  Bit Score: 62.16  E-value: 2.56e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 499188870 12 MPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQKNLQ 54
Cdd:NF033227  1 MSKRKIKTYHQLVEEYKKEIMRSPKEMDMIYDRIDRKHQKRLL 43
 
Name Accession Description Interval E-value
Fur_reg_FbpB NF033227
Fur-regulated basic protein FbpB; This model describes FbpB (Fur-regulated basic protein B), ...
 12-54 2.56e-15

Fur-regulated basic protein FbpB; This model describes FbpB (Fur-regulated basic protein B), one of three paralogous small proteins recognized by Pfam model PF13040 in Bacillus subtilis.


Pssm-ID: 380223  Cd Length: 43  Bit Score: 62.16  E-value: 2.56e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 499188870 12 MPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQKNLQ 54
Cdd:NF033227  1 MSKRKIKTYHQLVEEYKKEIMRSPKEMDMIYDRIDRKHQKRLL 43
Fur_reg_FbpB pfam13040
Fur-regulated basic protein B; This family of proteins is regulated by the ferric uptake ...
 14-51 7.60e-09

Fur-regulated basic protein B; This family of proteins is regulated by the ferric uptake regulator protein Fur. This family represses expression of the lutABC operon encoding iron sulfur-containing enzymes necessary for growth on lactate.


Pssm-ID: 379027  Cd Length: 39  Bit Score: 45.61  E-value: 7.60e-09
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 499188870  14 KRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQK 51
Cdd:pfam13040  2 KRKKKSFEELVRENKKELLNDPEAMEKIEERLEERHEK 39
 
Name Accession Description Interval E-value
Fur_reg_FbpB NF033227
Fur-regulated basic protein FbpB; This model describes FbpB (Fur-regulated basic protein B), ...
 12-54 2.56e-15

Fur-regulated basic protein FbpB; This model describes FbpB (Fur-regulated basic protein B), one of three paralogous small proteins recognized by Pfam model PF13040 in Bacillus subtilis.


Pssm-ID: 380223  Cd Length: 43  Bit Score: 62.16  E-value: 2.56e-15
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 499188870 12 MPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQKNLQ 54
Cdd:NF033227  1 MSKRKIKTYHQLVEEYKKEIMRSPKEMDMIYDRIDRKHQKRLL 43
Fur_reg_FbpB pfam13040
Fur-regulated basic protein B; This family of proteins is regulated by the ferric uptake ...
 14-51 7.60e-09

Fur-regulated basic protein B; This family of proteins is regulated by the ferric uptake regulator protein Fur. This family represses expression of the lutABC operon encoding iron sulfur-containing enzymes necessary for growth on lactate.


Pssm-ID: 379027  Cd Length: 39  Bit Score: 45.61  E-value: 7.60e-09
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 499188870  14 KRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQK 51
Cdd:pfam13040  2 KRKKKSFEELVRENKKELLNDPEAMEKIEERLEERHEK 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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