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Conserved domains on  [gi|499270983|ref|WP_010968376|]
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TadE/TadG family type IV pilus assembly protein [Sinorhizobium meliloti]

Protein Classification

TadE/TadG family type IV pilus assembly protein( domain architecture ID 11471839)

TadE/TadG family type IV pilus assembly protein such as TadE/TadG that may act to assemble or export Flp pilus in various bacteria

Gene Ontology:  GO:0009297

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TadG COG4961
Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, ...
 7-147 3.06e-11

Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


:

Pssm-ID: 443987 [Multi-domain]  Cd Length: 152  Bit Score: 59.05  E-value: 3.06e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499270983   7 RKQHLWGAFHGLLRDRRGAGAVEFAIVAPLLIAAYVGAFELSLGFTVARKVGRASSAVSDIVTQEQQVSKAfldgmRNVA 86
Cdd:COG4961    2 RRRRLRRLLRRFRRDERGAAAVEFALVLPVLLLLLGGIIEFGRAFYARSKLQNAADAAARAAARGQATDAD-----TAAA 76

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499270983  87 RNMLVPYDGSDYDLKITGIQVNGTTEGKVAWSRGWSDASDGATVPYAVNSVVSVPADLDAV 147
Cdd:COG4961   77 IVAVGGSSQVVAGGAAASGAVVVDLGAASLDLEDSSGDAADTSGLSSASGLNSLGTSLAGS 137
 
Name Accession Description Interval E-value
TadG COG4961
Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, ...
 7-147 3.06e-11

Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 443987 [Multi-domain]  Cd Length: 152  Bit Score: 59.05  E-value: 3.06e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499270983   7 RKQHLWGAFHGLLRDRRGAGAVEFAIVAPLLIAAYVGAFELSLGFTVARKVGRASSAVSDIVTQEQQVSKAfldgmRNVA 86
Cdd:COG4961    2 RRRRLRRLLRRFRRDERGAAAVEFALVLPVLLLLLGGIIEFGRAFYARSKLQNAADAAARAAARGQATDAD-----TAAA 76

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499270983  87 RNMLVPYDGSDYDLKITGIQVNGTTEGKVAWSRGWSDASDGATVPYAVNSVVSVPADLDAV 147
Cdd:COG4961   77 IVAVGGSSQVVAGGAAASGAVVVDLGAASLDLEDSSGDAADTSGLSSASGLNSLGTSLAGS 137
TadE pfam07811
TadE-like protein; The members of this family are similar to a region of the protein product ...
 24-63 2.10e-05

TadE-like protein; The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.


Pssm-ID: 462276  Cd Length: 43  Bit Score: 40.02  E-value: 2.10e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 499270983   24 GAGAVEFAIVAPLLIAAYVGAFELSLGFTVARKVGRASSA 63
Cdd:pfam07811   1 GSAAVEFALVLPLLLLLLLGIVEFGRALYARQTLQNAARE 40
 
Name Accession Description Interval E-value
TadG COG4961
Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, ...
 7-147 3.06e-11

Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 443987 [Multi-domain]  Cd Length: 152  Bit Score: 59.05  E-value: 3.06e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499270983   7 RKQHLWGAFHGLLRDRRGAGAVEFAIVAPLLIAAYVGAFELSLGFTVARKVGRASSAVSDIVTQEQQVSKAfldgmRNVA 86
Cdd:COG4961    2 RRRRLRRLLRRFRRDERGAAAVEFALVLPVLLLLLGGIIEFGRAFYARSKLQNAADAAARAAARGQATDAD-----TAAA 76

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499270983  87 RNMLVPYDGSDYDLKITGIQVNGTTEGKVAWSRGWSDASDGATVPYAVNSVVSVPADLDAV 147
Cdd:COG4961   77 IVAVGGSSQVVAGGAAASGAVVVDLGAASLDLEDSSGDAADTSGLSSASGLNSLGTSLAGS 137
TadE pfam07811
TadE-like protein; The members of this family are similar to a region of the protein product ...
 24-63 2.10e-05

TadE-like protein; The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.


Pssm-ID: 462276  Cd Length: 43  Bit Score: 40.02  E-value: 2.10e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 499270983   24 GAGAVEFAIVAPLLIAAYVGAFELSLGFTVARKVGRASSA 63
Cdd:pfam07811   1 GSAAVEFALVLPLLLLLLLGIVEFGRALYARQTLQNAARE 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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