NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|499271024|ref|WP_010968417|]
View 

N-acetylglucosamine kinase [Sinorhizobium meliloti]

Protein Classification

N-acetylglucosamine kinase( domain architecture ID 10006823)

N-acetylglucosamine kinase of eukaryotic type similar to Clostridium acetobutylicum N-acetylmuramic acid/N-acetylglucosamine kinase.

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
ASKHA_NBD_GspK-like cd24082
nucleotide-binding domain (NBD) of Vibrio cholerae glucosamine kinase GspK and similar ...
4-281 8.16e-98

nucleotide-binding domain (NBD) of Vibrio cholerae glucosamine kinase GspK and similar proteins; The family includes a group of uncharacterized proteins similar to Vibrio cholerae glucosamine kinase GspK (EC 2.7.1.8), also called GlcN kinase. It acts as ATP-dependent kinase, which is specific for glucosamine. GspK does not show kinase activity with any other sugar.


:

Pssm-ID: 466932 [Multi-domain]  Cd Length: 279  Bit Score: 288.66  E-value: 8.16e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILTDPETALQNITDAARDAFGDAGLDPAGIGASRAIVGVAGHNVGDA 83
Cdd:cd24082    1 YFIGIDGGGTKCRARLADADGTVLGEATGGPANLSSDLDQAWASILAAIKQALAQAGLDAAALSDLHAGLGLAGANVPEA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  84 VHYVKRRLP-FAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSYVGGWGFTIGDHGSGARIGHALLQESL 162
Cdd:cd24082   81 RAAFLAALPpFASLVVVSDAHIACLGAHGGEDGAIIILGTGSVGAALDGGEVRQVGGWGFPLGDEGSGAWLGLRALRHTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 163 LAYDGIHQGSGVTDAVLAEFNDDPRDIVDFARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEALDVVVSRGS 242
Cdd:cd24082  161 LALDGLAPSSPLTRAVLARFGGDPAEIVAWANTATPADFAALAPLVFEAAEQGDPVALAILQEAAAYIERLLRALGAQGA 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 499271024 243 EKLCLLGGLAPLYRRWLADRHQPRFVEARADALTGAVAL 281
Cdd:cd24082  241 LPLCLLGGLAERLAPYLPEDLQARLVPPKGDALDGALLL 279
 
Name Accession Description Interval E-value
ASKHA_NBD_GspK-like cd24082
nucleotide-binding domain (NBD) of Vibrio cholerae glucosamine kinase GspK and similar ...
4-281 8.16e-98

nucleotide-binding domain (NBD) of Vibrio cholerae glucosamine kinase GspK and similar proteins; The family includes a group of uncharacterized proteins similar to Vibrio cholerae glucosamine kinase GspK (EC 2.7.1.8), also called GlcN kinase. It acts as ATP-dependent kinase, which is specific for glucosamine. GspK does not show kinase activity with any other sugar.


Pssm-ID: 466932 [Multi-domain]  Cd Length: 279  Bit Score: 288.66  E-value: 8.16e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILTDPETALQNITDAARDAFGDAGLDPAGIGASRAIVGVAGHNVGDA 83
Cdd:cd24082    1 YFIGIDGGGTKCRARLADADGTVLGEATGGPANLSSDLDQAWASILAAIKQALAQAGLDAAALSDLHAGLGLAGANVPEA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  84 VHYVKRRLP-FAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSYVGGWGFTIGDHGSGARIGHALLQESL 162
Cdd:cd24082   81 RAAFLAALPpFASLVVVSDAHIACLGAHGGEDGAIIILGTGSVGAALDGGEVRQVGGWGFPLGDEGSGAWLGLRALRHTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 163 LAYDGIHQGSGVTDAVLAEFNDDPRDIVDFARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEALDVVVSRGS 242
Cdd:cd24082  161 LALDGLAPSSPLTRAVLARFGGDPAEIVAWANTATPADFAALAPLVFEAAEQGDPVALAILQEAAAYIERLLRALGAQGA 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 499271024 243 EKLCLLGGLAPLYRRWLADRHQPRFVEARADALTGAVAL 281
Cdd:cd24082  241 LPLCLLGGLAERLAPYLPEDLQARLVPPKGDALDGALLL 279
BadF COG2971
BadF-type ATPase, related to human N-acetylglucosamine kinase [Carbohydrate transport and ...
4-288 1.18e-70

BadF-type ATPase, related to human N-acetylglucosamine kinase [Carbohydrate transport and metabolism];


Pssm-ID: 442210 [Multi-domain]  Cd Length: 298  Bit Score: 220.14  E-value: 1.18e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILT-DPETALQNITDAARDAFGDAGLDPAgigASRAIVGVAGHNVGD 82
Cdd:COG2971    2 YILGVDGGGTKTRAVLVDADGEVLGRGRAGGANPQSvGLEEALASLREALEEALAAAGDPAD---IEAVGFGLAGAGTPE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  83 AVHYVKRRL----PFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGD-EVSYVGGWGFTIGDHGSGARIGHAL 157
Cdd:COG2971   79 DAEALEAALrelfPFARVVVVNDALAALAGALGGEDGIVVIAGTGSIAAGRDGDgRTARVGGWGYLLGDEGSGAWLGREA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 158 LQESLLAYDGIHQGSGVTDAVLAEFN-DDPRDIVDFARL--AKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEAL 234
Cdd:COG2971  159 LRAALRALDGRGPPTALTEAVLAEFGlDDPEELIAWVYRgpAPPADLASLAPLVFEAAEAGDPVARAILEEAADELAELA 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 235 DVVVSRGSEKLCLLGGLA---PLYRRWLADR---HQPRFVEARADALTGAVALAAARFGS 288
Cdd:COG2971  239 RALLERGALPVVLAGGVAaaqPLLREALRARlaaGGAEIVPPAGDPVDGALLLALRLLGA 298
BcrAD_BadFG pfam01869
BadF/BadG/BcrA/BcrD ATPase family; This family includes the BadF and BadG proteins that are ...
6-252 2.32e-19

BadF/BadG/BcrA/BcrD ATPase family; This family includes the BadF and BadG proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase. The protein Swiss:O66634 contains two copies of this region suggesting that the family may structurally dimerize. This family appears to be related to pfam00370.


Pssm-ID: 396441 [Multi-domain]  Cd Length: 271  Bit Score: 85.48  E-value: 2.32e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024    6 IGIDGGGTSCRAAVAALDGRILGRGKAGAANI-LTDPETALQNITDAARDAFGDAGLDPAGIGasRAIVGVAGHNVGDAV 84
Cdd:pfam01869   1 LGIDGGSTKTKAVLMDDDGEVLGRAIAGSANFeSVGVEAAERNLKDAITEALEEAGLKLDDIE--YMFLGLTGYGRAGVD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   85 HYVKRRLPFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSYVGGWGFTIGDHGSGARIGHALLQESLLA 164
Cdd:pfam01869  79 GHFGKDIVREEITVHADGAVALAPGTRGEDGVIDIGGTGSKVIGLDGGKVVRFGGNGQCAGGEGSFLEIAARALGAVVRE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  165 YDGIhqgsgvtdavlaefnddpRDIVDFARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEALDVVVSRGSE- 243
Cdd:pfam01869 159 LDGL------------------APKTTLNKGAINSTCAVFAEQVVINALSGGETAEDILAGAARSIALRVAALAKRLGFv 220
                         250
                  ....*....|.
gi 499271024  244 --KLCLLGGLA 252
Cdd:pfam01869 221 pdEVVLTGGVA 231
 
Name Accession Description Interval E-value
ASKHA_NBD_GspK-like cd24082
nucleotide-binding domain (NBD) of Vibrio cholerae glucosamine kinase GspK and similar ...
4-281 8.16e-98

nucleotide-binding domain (NBD) of Vibrio cholerae glucosamine kinase GspK and similar proteins; The family includes a group of uncharacterized proteins similar to Vibrio cholerae glucosamine kinase GspK (EC 2.7.1.8), also called GlcN kinase. It acts as ATP-dependent kinase, which is specific for glucosamine. GspK does not show kinase activity with any other sugar.


Pssm-ID: 466932 [Multi-domain]  Cd Length: 279  Bit Score: 288.66  E-value: 8.16e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILTDPETALQNITDAARDAFGDAGLDPAGIGASRAIVGVAGHNVGDA 83
Cdd:cd24082    1 YFIGIDGGGTKCRARLADADGTVLGEATGGPANLSSDLDQAWASILAAIKQALAQAGLDAAALSDLHAGLGLAGANVPEA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  84 VHYVKRRLP-FAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSYVGGWGFTIGDHGSGARIGHALLQESL 162
Cdd:cd24082   81 RAAFLAALPpFASLVVVSDAHIACLGAHGGEDGAIIILGTGSVGAALDGGEVRQVGGWGFPLGDEGSGAWLGLRALRHTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 163 LAYDGIHQGSGVTDAVLAEFNDDPRDIVDFARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEALDVVVSRGS 242
Cdd:cd24082  161 LALDGLAPSSPLTRAVLARFGGDPAEIVAWANTATPADFAALAPLVFEAAEQGDPVALAILQEAAAYIERLLRALGAQGA 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 499271024 243 EKLCLLGGLAPLYRRWLADRHQPRFVEARADALTGAVAL 281
Cdd:cd24082  241 LPLCLLGGLAERLAPYLPEDLQARLVPPKGDALDGALLL 279
BadF COG2971
BadF-type ATPase, related to human N-acetylglucosamine kinase [Carbohydrate transport and ...
4-288 1.18e-70

BadF-type ATPase, related to human N-acetylglucosamine kinase [Carbohydrate transport and metabolism];


Pssm-ID: 442210 [Multi-domain]  Cd Length: 298  Bit Score: 220.14  E-value: 1.18e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILT-DPETALQNITDAARDAFGDAGLDPAgigASRAIVGVAGHNVGD 82
Cdd:COG2971    2 YILGVDGGGTKTRAVLVDADGEVLGRGRAGGANPQSvGLEEALASLREALEEALAAAGDPAD---IEAVGFGLAGAGTPE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  83 AVHYVKRRL----PFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGD-EVSYVGGWGFTIGDHGSGARIGHAL 157
Cdd:COG2971   79 DAEALEAALrelfPFARVVVVNDALAALAGALGGEDGIVVIAGTGSIAAGRDGDgRTARVGGWGYLLGDEGSGAWLGREA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 158 LQESLLAYDGIHQGSGVTDAVLAEFN-DDPRDIVDFARL--AKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEAL 234
Cdd:COG2971  159 LRAALRALDGRGPPTALTEAVLAEFGlDDPEELIAWVYRgpAPPADLASLAPLVFEAAEAGDPVARAILEEAADELAELA 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 235 DVVVSRGSEKLCLLGGLA---PLYRRWLADR---HQPRFVEARADALTGAVALAAARFGS 288
Cdd:COG2971  239 RALLERGALPVVLAGGVAaaqPLLREALRARlaaGGAEIVPPAGDPVDGALLLALRLLGA 298
ASKHA_NBD_eukNAGK-like cd24007
nucleotide-binding domain (NBD) of the eukaryotic-type N-acetylglucosamine kinase (NAGK) ...
6-281 1.56e-45

nucleotide-binding domain (NBD) of the eukaryotic-type N-acetylglucosamine kinase (NAGK) family; The eukaryotic-type NAGK-like family includes a group of proteins similar to eukaryotic N-acetyl-D-glucosamine kinases, such as Vibrio cholerae glucosamine kinase GspK, Sulfurisphaera tokodaii ATP-dependent hexokinase (StHK), Thermoplasma acidophilum 2-dehydro-3-deoxygluconokinase (KdgK) and Clostridium acetobutylicum N-acetylmuramic acid/N-acetylglucosamine kinase (MurK). NAGK (EC 2.7.1.59), also called GlcNAc kinase, converts endogenous N-acetylglucosamine (GlcNAc), a major component of complex carbohydrates, from lysosomal degradation or nutritional sources into GlcNAc 6-phosphate. It is involved in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway. NAGK also has ManNAc kinase activity. GspK (EC 2.7.1.8), also called GlcN kinase, acts as ATP-dependent kinase, which is specific for glucosamine. StHK is a novel hexokinase that can phosphorylate not only glucose but also GlcNAc, glucosamine, and mannose. KdgK (EC 2.7.1.45), also called 2-keto-3-deoxy-D-gluconate kinase, or KDG kinase, catalyzes the phosphorylation of 2-keto-3-deoxygluconate (KDG) to produce 2-keto-3-deoxy-6-phosphogluconate (KDPG). It is specific for KDG. MurK (EC 2.7.1.-/EC 2.7.1.59), also known MurNAc/GlcNAc kinase, or murein sugar kinase, catalyzes the ATP-dependent phosphorylation of both cell wall (peptidoglycan) amino sugars, N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), at the 6-hydroxyl group. The eukaryotic-type N-acetylglucosamine kinase (NAGK) family belongs to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.


Pssm-ID: 466857 [Multi-domain]  Cd Length: 295  Bit Score: 155.54  E-value: 1.56e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   6 IGIDGGGTSCRAAVAALDGRILGRGKAGAANI-LTDPETALQNITDAARDAFGDAGLDPAgigASRAIVGVAG-HNVGDA 83
Cdd:cd24007    2 LGVDGGGTKTRAVLADEDGKILGRGKGGPSNPaSVGIEEAKENLKEAVREALSQAGSLGE---IDAICLGLAGiDSEEDR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  84 ---VHYVKRRLPFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGD-EVSYVGGWGFTIGDHGSGARIGHALLQ 159
Cdd:cd24007   79 erlRSALKELFLSGRIIIVNDAEIALAAALGGGPGIVVIAGTGSVAYGRNGDgEEARVGGWGHLLGDEGSGYWIGRRALR 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 160 ESLLAYDGIHQGSGVTDAVLAEFN-DDPRDIVDFARLAK--PGEFGRYAPRVFEFAERGDPVAISLLK-AAAATVDEALD 235
Cdd:cd24007  159 AALRALDGRGPKTPLLDAILKFLGlDSIEELITAIYRSSdrKKEIASLAPLVFEAAEEGDPVAQAILKeAAEELAKLVVA 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499271024 236 VVVSRG---SEKLCLLGGL--------APLYRRWLADRHQPRFVEARADALTGAVAL 281
Cdd:cd24007  239 LAKLLLlgeKLPLALSGGVfknnyylaEFLEELLKKKKPNAKVVEPKGSPVVGALLL 295
ASKHA_NBD_KdgK-like cd24083
nucleotide-binding domain (NBD) of Thermoplasma acidophilum 2-dehydro-3-deoxygluconokinase ...
5-250 5.35e-34

nucleotide-binding domain (NBD) of Thermoplasma acidophilum 2-dehydro-3-deoxygluconokinase (KdgK) and similar proteins; The family includes a group of uncharacterized proteins similar to Thermoplasma acidophilum 2-dehydro-3-deoxygluconokinase (KdgK; EC 2.7.1.45), also called 2-keto-3-deoxy-D-gluconate kinase, or KDG kinase. It catalyzes the phosphorylation of 2-keto-3-deoxygluconate (KDG) to produce 2-keto-3-deoxy-6-phosphogluconate (KDPG). It is specific for KDG.


Pssm-ID: 466933 [Multi-domain]  Cd Length: 284  Bit Score: 125.19  E-value: 5.35e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   5 LIGIDGGGTSCRAAVAALD-GRILGRGKAGAANILTDP-ETALQNITDAARDAFGDAGLDpagiGASRAIVGVAGhnVGD 82
Cdd:cd24083    1 ILGVDGGGTKTLAVLFDERqGEIVGIGISGPSNFTVVGrETARKNISDAINDALSDAGMD----SIDKATFGLAG--IGD 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  83 AVHYVKR-----RLPFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSYVGGWGFTIGDHGSGARIGHAL 157
Cdd:cd24083   75 SYEATIMgeeiiRSGLKKFDIYNDGEAAYYSGNGDDDGIVFAPGTGSVGYIKDEGRVNRIGGWGWSLGDEGSAFWIAKQA 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 158 LQESLLAYDGIHQGSGVTDAVLAEFNDDPRDIV-DFARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEALDV 236
Cdd:cd24083  155 IEAAMREMDGREEWTSLVVEVEKEFKLSLRELViNISYEGIKRLVASLAKLVSQLAEKGDPVALAIFDEAASEIKKIINA 234
                        250
                 ....*....|....*.
gi 499271024 237 VVSRGSE--KLCLLGG 250
Cdd:cd24083  235 HRLNFGPpiRVSLVGG 250
ASKHA_NBD_MurK-like cd24084
nucleotide-binding domain (NBD) of Clostridium acetobutylicum N-acetylmuramic acid ...
4-283 1.34e-32

nucleotide-binding domain (NBD) of Clostridium acetobutylicum N-acetylmuramic acid/N-acetylglucosamine kinase (MurK) and similar proteins; The family includes a group of uncharacterized proteins similar to Clostridium acetobutylicum N-acetylmuramic acid/N-acetylglucosamine kinase (MurK; EC 2.7.1.-/EC 2.7.1.59), also known MurNAc/GlcNAc kinase, or murein sugar kinase. It catalyzes the ATP-dependent phosphorylation of both cell wall (peptidoglycan) amino sugars, N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), at the 6-hydroxyl group. Neither the non-N-acetylated forms of the cell wall sugars, i.e., glucosamine and/or muramic acid, nor epimeric hexoses or 1,6-anhydro-MurNAc are substrates for the enzyme. MurK may have a role in the rescue of the murein sugars GlcNAc and MurNAc released from muropeptides during cell wall turnover in C.acetobutylicum.


Pssm-ID: 466934 [Multi-domain]  Cd Length: 302  Bit Score: 121.70  E-value: 1.34e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILTDP-ETALQNITDAARDAFGDAGLDPAGIGAsrAIVGVAGHNVGD 82
Cdd:cd24084    2 YVIGIDGGGTKTHLKITDLNGNVVGEGFGGSSNLESNSlETVRENLKELFQDFYEQLGKSLKECGS--ICLGTAGASHQG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  83 AVHYVKRRL----PFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSY-VGGWGFTIGDHGSGARIGHAL 157
Cdd:cd24084   80 AKETLKDILtelgPDAKIEVVNDAEIALAAGLEGKPGIVLISGTGSICYGRNTDGETArAGGWGHLLGDEGSGYWIAMQA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 158 LQESLLAYDGIHQGSGVTDAVLAEF-NDDPRDIVDFARLAK--PGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEAL 234
Cdd:cd24084  160 LGAVLQAFDGRGPKTILTELLLEELkLSSPRELIDFIYSSDadKKEIASLARLVDEAADQGDEVAKEILEEAARELARLA 239
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499271024 235 DVVVSRGSEKL----CLLGG---------LAPLYRRWLADRHQPRFVEARADALTGAVALAA 283
Cdd:cd24084  240 IAVAQKLLMKPkdfvVILGGsvlenccvlRSKLSALILTKYPNAIVGLLKHDAAYGAVKLAR 301
ASKHA_NBD_StHK-like cd24080
nucleotide-binding domain (NBD) of Sulfurisphaera tokodaii ATP-dependent hexokinase (StHK) and ...
5-251 3.65e-25

nucleotide-binding domain (NBD) of Sulfurisphaera tokodaii ATP-dependent hexokinase (StHK) and similar proteins; The family includes a group of uncharacterized proteins similar to Sulfurisphaera tokodaii ATP-dependent hexokinase (StHK). Hexokinase (EC 2.7.1.1) catalyzes the phosphorylation of glucose to glucose 6-phosphate by using ATP as a phosphoryl donor. StHK is a novel hexokinase that can phosphorylate not only glucose but also GlcNAc, glucosamine, and mannose. It differs from other known hexokinases and glucokinases in that its activity is strongly inhibited by ADP. It is distinct in its broad substrate specificity from the GlcNAc kinases, which are specific for GlcNAc.


Pssm-ID: 466930 [Multi-domain]  Cd Length: 291  Bit Score: 101.73  E-value: 3.65e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   5 LIGIDGGGTSCRAAVAALDGRILGRGKAGAANI-LTDPETALQNITDAARDAFgdagldpAGIGASRAIVGVAGhnVGDA 83
Cdd:cd24080    3 ILGVDGGGTKTEAVAYDCKGRFLGYGLAGPGNIhNVGLESAIENVKEAVKRAL-------KGGRADVAVLGFAG--ADSK 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  84 VHYVK-----RRLPFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGD-EVSYVGGWGFTIGDHGSGARIGHAL 157
Cdd:cd24080   74 KDWEKftellSKIIAKKVIVQHDGEIALIAETRGSPGVMVIAGTGSIVEGYDGRgRVVRVGGWGWLLGDEGSGYWIGREA 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 158 LQESLLAYDGIHQGSGVTDAVLAEFN-DDPRDIVD--FARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEAL 234
Cdd:cd24080  154 LRALLRMLDGRENKTILAEKVLKTLNvEDFDELVEwiYSSLCPVDLIASLAKAVDEAAEEGDTVARDILKRAAEELASAA 233
                        250
                 ....*....|....*...
gi 499271024 235 DVVVSR-GSEKLCLLGGL 251
Cdd:cd24080  234 VALARKiGPVKVYLKGGM 251
BcrAD_BadFG pfam01869
BadF/BadG/BcrA/BcrD ATPase family; This family includes the BadF and BadG proteins that are ...
6-252 2.32e-19

BadF/BadG/BcrA/BcrD ATPase family; This family includes the BadF and BadG proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase. The protein Swiss:O66634 contains two copies of this region suggesting that the family may structurally dimerize. This family appears to be related to pfam00370.


Pssm-ID: 396441 [Multi-domain]  Cd Length: 271  Bit Score: 85.48  E-value: 2.32e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024    6 IGIDGGGTSCRAAVAALDGRILGRGKAGAANI-LTDPETALQNITDAARDAFGDAGLDPAGIGasRAIVGVAGHNVGDAV 84
Cdd:pfam01869   1 LGIDGGSTKTKAVLMDDDGEVLGRAIAGSANFeSVGVEAAERNLKDAITEALEEAGLKLDDIE--YMFLGLTGYGRAGVD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   85 HYVKRRLPFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEVSYVGGWGFTIGDHGSGARIGHALLQESLLA 164
Cdd:pfam01869  79 GHFGKDIVREEITVHADGAVALAPGTRGEDGVIDIGGTGSKVIGLDGGKVVRFGGNGQCAGGEGSFLEIAARALGAVVRE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  165 YDGIhqgsgvtdavlaefnddpRDIVDFARLAKPGEFGRYAPRVFEFAERGDPVAISLLKAAAATVDEALDVVVSRGSE- 243
Cdd:pfam01869 159 LDGL------------------APKTTLNKGAINSTCAVFAEQVVINALSGGETAEDILAGAARSIALRVAALAKRLGFv 220
                         250
                  ....*....|.
gi 499271024  244 --KLCLLGGLA 252
Cdd:pfam01869 221 pdEVVLTGGVA 231
ASKHA_NBD_DdNAGK-like cd24081
nucleotide-binding domain (NBD) of Dictyostelium discoideum N-acetyl-D-glucosamine kinase ...
6-240 2.02e-15

nucleotide-binding domain (NBD) of Dictyostelium discoideum N-acetyl-D-glucosamine kinase (NAGK) and similar proteins; The family includes a group of uncharacterized proteins similar to Dictyostelium discoideum N-acetyl-D-glucosamine kinase (NAGK). NAGK (EC 2.7.1.59), also called N-acetylglucosamine kinase, or GlcNAc kinase, converts N-acetylglucosamine (GlcNAc), a major component of complex carbohydrates, into GlcNAc 6-phosphate. It also has ManNAc kinase activity.


Pssm-ID: 466931 [Multi-domain]  Cd Length: 311  Bit Score: 75.05  E-value: 2.02e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   6 IGIDGGGTSCR-----AAVAALDGRILGRGKAGAANILT-DPETALQNITDAARDAFGDAGLDPAGIGAsrAIVGVAGHN 79
Cdd:cd24081    2 LGIDGGGTKTTcvavdAATLGDNLLVLGRAVAGSSNYNSvGEEAARRAIEEAIAGALKQAGVPRSAVRA--VCLGISGVD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  80 VGDAVHYVKRRL-----PFAQADIESDGLIAL-QGALGDGDGAVAILGTGTIYIARRGDEVS-YVGGWGFTIGDHGSGAR 152
Cdd:cd24081   80 RPADAERVRSWLrelfpENVKVFVFNDAVAALaSGTAGKLHGCVLIAGTGTIAYGFNEDGKRaRAGGWGPLLGDRGSGHA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 153 IGHALLQESLLAYDGIHQGSGVTDAVLAEFN-DDPRDIVDFARlaKPGEFGRYA---PRVFEFAERGDPVAISLLKAAAA 228
Cdd:cd24081  160 IGSQALTAVMRAEDGRGPPTSLTGAILKKLGlSSPDDLIGWAY--DDTSWARVAalvPLVKACAAAGDAVALGILEDAAE 237
                        250
                 ....*....|..
gi 499271024 229 TVDEALDVVVSR 240
Cdd:cd24081  238 ELALSVKAVVRK 249
ASKHA_NBD_NAGK_meta cd24078
nucleotide-binding domain (NBD) of N-acetyl-D-glucosamine kinase (NAGK) and similar proteins; ...
4-226 1.60e-13

nucleotide-binding domain (NBD) of N-acetyl-D-glucosamine kinase (NAGK) and similar proteins; NAGK (EC 2.7.1.59), also called N-acetylglucosamine kinase, or GlcNAc kinase, converts endogenous N-acetylglucosamine (GlcNAc), a major component of complex carbohydrates, from lysosomal degradation or nutritional sources into GlcNAc 6-phosphate. It is involved in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway. NAGK also has ManNAc kinase activity. Members in this family are mainly from metazoa.


Pssm-ID: 466928 [Multi-domain]  Cd Length: 314  Bit Score: 69.53  E-value: 1.60e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANI-LTDPETALQNITDAARDAFGDAGLDP----AGIGASraivgVAGH 78
Cdd:cd24078    1 YFGGVEGGATHSKLVIMDEDGKILAESEGPGTNHwLIGLDECAKRINEMVQEAKKKAGLDPdtplKSLGLS-----LSGA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  79 NVGDA----VHYVKRRLP--FAQADIESDGLIALQGALGDGdGAVAILGTGTI--YIARRGdEVSYVGGWGFTIGDHGSG 150
Cdd:cd24078   76 EQEEAqeelIEGLRSRYPnlSESYYVTSDTVGAIATAFENG-GIVLISGTGSNcqLINPDG-STAGCGGWGHMLGDEGSA 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 151 ARIGHALLQESLLAYDGIHQG----SGVTDAVLAEFN-DDPRDIVDFarLAKPGEFGRYA---PRVFEFAERGDPVAISL 222
Cdd:cd24078  154 YWIAHRAIKAVFDAEDNFEPPphdiSYVKKAMFEYFKiEDRLDLLPH--LYTNFDKSKIAgfcKKLAEGAAEGDPLCRHL 231

                 ....
gi 499271024 223 LKAA 226
Cdd:cd24078  232 FREA 235
ASKHA_NBD_PG1100-like cd24079
nucleotide-binding domain (NBD) of Porphyromonas gingivalis putative N-acetylglucosamine ...
4-247 1.20e-12

nucleotide-binding domain (NBD) of Porphyromonas gingivalis putative N-acetylglucosamine kinase (PG1100) and similar proteins; The family includes a group of uncharacterized proteins similar to Porphyromonas gingivalis putative N-acetylglucosamine kinase (PG1100; EC 2.7.1.59), which may convert GlcNAc to GlcNAc-6-phosphate, a component utilized in UDP-GlcNAc biosynthesis or energy metabolism.


Pssm-ID: 466929 [Multi-domain]  Cd Length: 276  Bit Score: 66.47  E-value: 1.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGiDGGGTSCRAAVAALDGRILGRGKAGAANILTDPETALQNITDAARDAFGDAGLDP-----AGIG--ASRAIVGva 76
Cdd:cd24079    1 ILIA-DSGGTKTDWALVDGGGVIKQFTTKGLNPFFLSDEEIEQILALVLLPLLEESKIEEvyfygAGCGspERAARIK-- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024  77 ghnvgdavHYVKRRLPFAQADIESDGLIALQGALGDGDGAVAILGTGTIYIARRGDEV-SYVGGWGFTIGDHGSGARIGH 155
Cdd:cd24079   78 --------RLLKKVFPKAEIEVKSDLLGAARALCGDKKGIVCILGTGSNSCYYDGEKIhDQRPGLGYLLGDEGSGAYLGK 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024 156 ALLQESLlaYDGIHqgSGVTDAVLAEFNDDPRDIVDfaRLAKPGEFGRY----APRVFEFAErgDPVAISLLKAAaatVD 231
Cdd:cd24079  150 LLLRDYL--YGQLP--EELRKRFEEQFGLNKEEILS--RVYRSPDPNRYlaslSRFIAEHLE--HPYIRELIRES---FR 218
                        250
                 ....*....|....*.
gi 499271024 232 EALDVVVSRGSEKLCL 247
Cdd:cd24079  219 EFFETHVLPYPDYKTL 234
ASKHA_NBD_FGGY cd00366
nucleotide-binding domain (NBD) of the FGGY family of carbohydrate kinases; This family is ...
4-90 7.34e-06

nucleotide-binding domain (NBD) of the FGGY family of carbohydrate kinases; This family is predominantly composed of glycerol kinase (GK) and similar carbohydrate kinases including rhamnulokinase (RhuK), xylulokinase (XK), gluconokinase (GntK), ribulokinase (RBK), and fuculokinase (FK). These enzymes catalyze the transfer of a phosphate group, usually from ATP, to their carbohydrate substrates. The monomer of FGGY proteins contains two large domains, which are separated by a deep cleft that forms the active site. One domain is primarily involved in sugar substrate binding, and the other is mainly responsible for ATP binding. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Substrate-induced conformational changes and a divalent cation may be required for the catalytic activity. The FGGY family belongs to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.


Pssm-ID: 466787 [Multi-domain]  Cd Length: 392  Bit Score: 46.79  E-value: 7.34e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILT-------DPETALQNITDAARDAFGDAGLDP---AGIGASRAIV 73
Cdd:cd00366    1 YLLGIDIGTTSVKAALFDEDGNLVASASREYPLIYPqpgwaeqDPEDWWQAVVEAIREVLAKAGIDPsdiAAIGISGQMP 80
                         90       100
                 ....*....|....*....|..
gi 499271024  74 GVA-----GHNVGDAVHYVKRR 90
Cdd:cd00366   81 GVVlvdadGNPLRPAIIWLDRR 102
XylB COG1070
Sugar (pentulose or hexulose) kinase [Carbohydrate transport and metabolism]; Sugar (pentulose ...
4-78 1.10e-05

Sugar (pentulose or hexulose) kinase [Carbohydrate transport and metabolism]; Sugar (pentulose or hexulose) kinase is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 440688 [Multi-domain]  Cd Length: 494  Bit Score: 46.36  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILT-------DPETALQNITDAARDAFGDAGLDPAGIGAsraiVGVA 76
Cdd:COG1070    2 YVLGIDIGTTSVKAVLFDADGEVVASASAEYPLSSPhpgwaeqDPEDWWEAVVEAIRELLAKAGVDPEEIAA----IGVS 77

                 ..
gi 499271024  77 GH 78
Cdd:COG1070   78 GQ 79
NagC COG1940
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Carbohydrate ...
1-76 2.25e-05

Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Carbohydrate transport and metabolism, Transcription];


Pssm-ID: 441543 [Multi-domain]  Cd Length: 306  Bit Score: 45.27  E-value: 2.25e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499271024   1 MTFYLIGIDGGGTSCRAAVAALDGRILGRGKAgAANILTDPETALQNITDAARDAFGDAGLDPAGIGAsraiVGVA 76
Cdd:COG1940    3 DAGYVIGIDIGGTKIKAALVDLDGEVLARERI-PTPAGAGPEAVLEAIAELIEELLAEAGISRGRILG----IGIG 73
ASKHA_NBD_FGGY_YgcE-like cd07779
nucleotide-binding domain (NBD) of Escherichia coli sugar kinase YgcE and similar proteins; ...
4-68 3.86e-05

nucleotide-binding domain (NBD) of Escherichia coli sugar kinase YgcE and similar proteins; This subfamily contains a group of uncharacterized proteins with similarity to Escherichia coli sugar kinase YgcE. They belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466798 [Multi-domain]  Cd Length: 433  Bit Score: 44.82  E-value: 3.86e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILTDPETALQN-------ITDAARDAFGDAGLDPAGIGA 68
Cdd:cd07779    1 YILGIDVGTTSTRAIIFDLDGNIVASGYREYPPYYPEPGWVEQDpddwwdaLCEALKEAVAKAGVDPEDIAA 72
ASKHA_NBD_FGGY_EcLyxK-like cd07802
nucleotide-binding domain (NBD) of Escherichia coli L-xylulose/3-keto-L-gulonate kinase ...
4-81 4.77e-05

nucleotide-binding domain (NBD) of Escherichia coli L-xylulose/3-keto-L-gulonate kinase (EcLyxK) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Escherichia coli L-xylulose/3-keto-L-gulonate kinase (EcLyxK; EC 2.7.1.-/EC 2.7.1.53), Pasteurella multocida L-xylulose kinase (PmLyX, also known as L-xylulokinase; EC 2.7.1.53), and Brucella abortus erythritol kinase (BaEryA; EC 2.7.1.215). EcLyxK catalyzes the phosphorylation of L-xylulose and 3-keto-L-gulonate. It is involved in L-lyxose utilization via xylulose and may also be involved in the utilization of 2,3-diketo-L-gulonate. PmLyX catalyzes the phosphorylation of L-xylulose only. BaEryA catalyzes the phosphorylation of erythritol to D-erythritol-1-phosphate. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466805 [Multi-domain]  Cd Length: 444  Bit Score: 44.46  E-value: 4.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILG---------RGKAGAANIltDPETALQNITDAARDAFGDAGLDPAGIGAsraiVG 74
Cdd:cd07802    1 YLLGIDNGTTNVKAVLFDLDGREIAvasrptpviSPRPGWAER--DMDELWQATAEAIRELLEKSGVDPSDIAG----VG 74

                 ....*..
gi 499271024  75 VAGHNVG 81
Cdd:cd07802   75 VTGHGNG 81
ASKHA_ATPase_ROK cd23763
ATPase-like domain of the ROK (Repressor, ORF, Kinase) domain family; The ROK family ...
6-77 1.69e-04

ATPase-like domain of the ROK (Repressor, ORF, Kinase) domain family; The ROK family corresponds to a group of proteins including sugar kinases, transcriptional repressors, and yet uncharacterized open reading frames. ROK family sugar kinases phosphorylate a range of structurally distinct hexoses including the key carbon source D-glucose, various glucose epimers, and several acetylated hexosamines. The sugar kinases include N-acetyl-D-glucosamine kinase (NAGK; EC 2.7.1.59), polyphosphate glucokinase (PPGK; EC 2.7.1.63/EC 2.7.1.2), glucokinase (GLK; EC 2.7.1.2), fructokinase (FRK; EC 2.7.1.4), hexokinase (HK; EC 2.7.1.1), D-allose kinase (AlsK; EC 2.7.1.55), bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (GNE; EC 3.2.1.183/EC 2.7.1.60), N-acetylmannosamine kinase (NanK; EC 2.7.1.60), beta-glucoside kinase (BglK; EC 2.7.1.85), and N-acetylglucosamine kinase (EC 2.7.1.59). The family also contains the repressor proteins, such as N-acetylglucosamine repressor (NagC), xylose repressor (XylR), cyclobis-(1-6)-alpha-nigerosyl repressor (CYANR) and protein Mlc. ROK kinases harbor a conserved N-terminal ATP binding motif of sequence DxGxT, while ROK repressors possess a N-terminal extension that contains a canonical helix-turn-helix DNA binding motif. The ROK family proteins belong to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily of phosphotransferases, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.


Pssm-ID: 466849 [Multi-domain]  Cd Length: 239  Bit Score: 42.07  E-value: 1.69e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499271024   6 IGIDGGGTSCRAAVAALDGRILGRGKAgAANILTDPETALQNITDAARDAFGDAGL--DPAGIGasraiVGVAG 77
Cdd:cd23763    1 IGIDIGGTKIRAALVDLDGEILARERV-PTPAEEGPEAVLDRIAELIEELLAEAGVreRILGIG-----IGVPG 68
ASKHA_NBD_FGGY_BaXK-like cd07809
nucleotide-binding domain (NBD) of Bifidobacterium adolescentis xylulose kinase (XK) and ...
4-78 9.64e-04

nucleotide-binding domain (NBD) of Bifidobacterium adolescentis xylulose kinase (XK) and similar proteins; The subfamily includes a group of uncharacterized proteins with similarity to xylulose kinases (XKs) from Bifidobacterium adolescentis, Streptomyces coelicolor, Actinoplanes missouriensis and Haemophilus influenzae. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466809 [Multi-domain]  Cd Length: 443  Bit Score: 40.23  E-value: 9.64e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRA-AVAALDGRILGRGKAGAANILT-------DPETALQNITDAARDAFGDAGLDPAGIGAsraiVGV 75
Cdd:cd07809    1 LVLGIDLGTQSIKAvLIDAETGRVVASGSAPHENILIdpgwaeqDPEDWWDALQAAFAQLLKDAGAELRDVAA----IGI 76

                 ...
gi 499271024  76 AGH 78
Cdd:cd07809   77 SGQ 79
ASKHA_NBD_FGGY_YoaC-like cd07798
nucleotide-binding domain (NBD) of Bacillus subtilis sugar kinase YoaC and similar proteins; ...
4-68 2.32e-03

nucleotide-binding domain (NBD) of Bacillus subtilis sugar kinase YoaC and similar proteins; The subfamily includes a group of uncharacterized proteins with similarity to Bacillus subtilis sugar kinase YoaC. It is part of the yoaDCB operon and induced by sulfate. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466804 [Multi-domain]  Cd Length: 448  Bit Score: 39.13  E-value: 2.32e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRgkAGAANILT-----------DPETALQNITDAARDAFGDAGLDPAGIGA 68
Cdd:cd07798    1 YYLVIDIGTGGGRCALVDSEGKIVAI--AYREWEYYtdddypdakefDPEELWEKICEAIREALKKAGISPEDISA 74
ASKHA_NBD_FGGY_EcXK-like cd07808
nucleotide-binding domain (NBD) of Escherichia coli xylulose kinase (EcXK) and similar ...
4-78 5.67e-03

nucleotide-binding domain (NBD) of Escherichia coli xylulose kinase (EcXK) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Escherichia coli xylulose kinase (EcXK). XK (EC 2.7.1.17), also called xylulokinase or D-xylulose kinase, catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P), a molecule that may play an important role in the regulation of glucose metabolism and lipogenesis. EcXK, also known as 1-deoxy-D-xylulokinase, can also catalyze the phosphorylation of 1-deoxy-D-xylulose to 1-deoxy-D-xylulose 5-phosphate, with lower efficiency. It can also use D-ribulose, xylitol and D-arabitol, but D-xylulose is preferred over the other substrates. EcXK has a weak substrate-independent Mg-ATP-hydrolyzing activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466808 [Multi-domain]  Cd Length: 482  Bit Score: 37.90  E-value: 5.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILG---------RGKAGAANIltDPETALQNITDAARDAFGDAGLDPAGIgasrAIVG 74
Cdd:cd07808    1 YLLGIDLGTSSVKAVLVDEDGRVLAsasaeyptsSPKPGWAEQ--DPEDWWQATKEALRELLAKAGISPSDI----AAIG 74

                 ....
gi 499271024  75 VAGH 78
Cdd:cd07808   75 LTGQ 78
ASKHA_NBD_FGGY_FK cd07773
nucleotide-binding domain (NBD) of L-fuculokinase (FK) and similar proteins; FK (EC 2.7.1.51), ...
4-69 6.34e-03

nucleotide-binding domain (NBD) of L-fuculokinase (FK) and similar proteins; FK (EC 2.7.1.51), also called L-fuculose kinase, catalyzes the ATP-dependent phosphorylation of L-fuculose to produce L-fuculose-1-phosphate and ADP. It can also phosphorylate, with lower efficiency, D-ribulose, D-xylulose and D-fructose. The presence of Mg2+ or Mn2+ is required for enzymatic activity. FKs belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466793 [Multi-domain]  Cd Length: 443  Bit Score: 37.95  E-value: 6.34e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499271024   4 YLIGIDGGGTSCRAAVAALDGRILGRGKA-------GAANILTDPETALQNITDAARDAFGDAGLDP-AGIGAS 69
Cdd:cd07773    1 YLLGIDIGTTNVKAVLFDEDGRILASASRetplihpGPGWAELDPEELWEAVKEAIREAAAQAGPDPiAAISVS 74
FGGY_N pfam00370
FGGY family of carbohydrate kinases, N-terminal domain; This domain adopts a ribonuclease ...
4-76 7.53e-03

FGGY family of carbohydrate kinases, N-terminal domain; This domain adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain.


Pssm-ID: 395295 [Multi-domain]  Cd Length: 245  Bit Score: 37.32  E-value: 7.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499271024    4 YLIGIDGGGTSCRAAVAALDGRILGRGKAGAANILTDPETALQNI-------TDAARDAFGDAGLDP---AGIGASRAIV 73
Cdd:pfam00370   1 YYLGIDCGTTSTKAILFNEQGKIIAVAQLENPQITPHPGWAEQDPdeiwqavAQCIAKTLSQLGISLkqiKGIGISNQGH 80

                  ...
gi 499271024   74 GVA 76
Cdd:pfam00370  81 GTV 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH