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Conserved domains on  [gi|499303297|ref|WP_010994072|]
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MULTISPECIES: DUF4112 domain-containing protein [Nostocaceae]

Protein Classification

DUF4112 domain-containing protein( domain architecture ID 10601215)

DUF4112 domain-containing protein similar to Saccharomyces cerevisiae membrane protein YLR326W

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4112 pfam13430
Domain of unknown function (DUF4112); This family has several highly conserved GD ...
 10-112 5.62e-47

Domain of unknown function (DUF4112); This family has several highly conserved GD sequence-motifs of unknown function. The family is found in bacteria, archaea and fungi.


:

Pssm-ID: 433200  Cd Length: 104  Bit Score: 147.18  E-value: 5.62e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499303297   10 LNRIRQLSRLMDTSIRIPLTSFRIGIDPIIGLIPGGGDLISTAFSAYIIFLAT-RFGISRQDLAKMIFNVGLETVVGTVP 88
Cdd:pfam13430   1 LKRVRRRAYLLDKAFRIPGCGIRFGLDPIIGLIPVVGDVIGAALSLYLVREARkRLGLPKSLLLRMLANIAIDFLIGLIP 80

                          90       100
                  ....*....|....*....|....
gi 499303297   89 LVGDLFDAFYKSNIRNLAILEKHL 112
Cdd:pfam13430  81 VVGDLFDAAFKANTRNAALLEKHL 104
 
Name Accession Description Interval E-value
DUF4112 pfam13430
Domain of unknown function (DUF4112); This family has several highly conserved GD ...
 10-112 5.62e-47

Domain of unknown function (DUF4112); This family has several highly conserved GD sequence-motifs of unknown function. The family is found in bacteria, archaea and fungi.


Pssm-ID: 433200  Cd Length: 104  Bit Score: 147.18  E-value: 5.62e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499303297   10 LNRIRQLSRLMDTSIRIPLTSFRIGIDPIIGLIPGGGDLISTAFSAYIIFLAT-RFGISRQDLAKMIFNVGLETVVGTVP 88
Cdd:pfam13430   1 LKRVRRRAYLLDKAFRIPGCGIRFGLDPIIGLIPVVGDVIGAALSLYLVREARkRLGLPKSLLLRMLANIAIDFLIGLIP 80

                          90       100
                  ....*....|....*....|....
gi 499303297   89 LVGDLFDAFYKSNIRNLAILEKHL 112
Cdd:pfam13430  81 VVGDLFDAAFKANTRNAALLEKHL 104
 
Name Accession Description Interval E-value
DUF4112 pfam13430
Domain of unknown function (DUF4112); This family has several highly conserved GD ...
 10-112 5.62e-47

Domain of unknown function (DUF4112); This family has several highly conserved GD sequence-motifs of unknown function. The family is found in bacteria, archaea and fungi.


Pssm-ID: 433200  Cd Length: 104  Bit Score: 147.18  E-value: 5.62e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499303297   10 LNRIRQLSRLMDTSIRIPLTSFRIGIDPIIGLIPGGGDLISTAFSAYIIFLAT-RFGISRQDLAKMIFNVGLETVVGTVP 88
Cdd:pfam13430   1 LKRVRRRAYLLDKAFRIPGCGIRFGLDPIIGLIPVVGDVIGAALSLYLVREARkRLGLPKSLLLRMLANIAIDFLIGLIP 80

                          90       100
                  ....*....|....*....|....
gi 499303297   89 LVGDLFDAFYKSNIRNLAILEKHL 112
Cdd:pfam13430  81 VVGDLFDAAFKANTRNAALLEKHL 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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