formylmethanofuran dehydrogenase subunit C [Methanopyrus kandleri]
Protein Classification
similar to tungsten-containing formylmethanofuran dehydrogenase 2 subunit C( domain architecture ID 10022140)
protein similar to tungsten-containing formylmethanofuran dehydrogenase 2 subunit C
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||
| one_C_dehyd_C | TIGR03122 | formylmethanofuran dehydrogenase subunit C; Members of this largely archaeal protein family ... |
4-258 | 5.60e-124 | |||||
formylmethanofuran dehydrogenase subunit C; Members of this largely archaeal protein family are subunit C of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit C. Note that this model does not distinguish tungsten (FwdC) from molybdenum-containing (FmdC) forms of this enzyme. : Pssm-ID: 274439 [Multi-domain] Cd Length: 257 Bit Score: 353.18 E-value: 5.60e-124
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| Name | Accession | Description | Interval | E-value | |||||
| one_C_dehyd_C | TIGR03122 | formylmethanofuran dehydrogenase subunit C; Members of this largely archaeal protein family ... |
4-258 | 5.60e-124 | |||||
formylmethanofuran dehydrogenase subunit C; Members of this largely archaeal protein family are subunit C of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit C. Note that this model does not distinguish tungsten (FwdC) from molybdenum-containing (FmdC) forms of this enzyme. Pssm-ID: 274439 [Multi-domain] Cd Length: 257 Bit Score: 353.18 E-value: 5.60e-124
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| FwdC | COG2218 | Formylmethanofuran dehydrogenase subunit C [Energy production and conversion]; |
1-258 | 8.50e-121 | |||||
Formylmethanofuran dehydrogenase subunit C [Energy production and conversion]; Pssm-ID: 441820 [Multi-domain] Cd Length: 264 Bit Score: 345.26 E-value: 8.50e-121
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| FwdC/FmdC | cd00980 | FwdC/FmdC. This domain of unknown function is found in the subunit C of formylmethanofuran ... |
45-246 | 3.90e-97 | |||||
FwdC/FmdC. This domain of unknown function is found in the subunit C of formylmethanofuran dehydrogenase, an enzyme that catalyzes the first step in methane formation from CO2 in methanogenic archaea, hyperthermophiles and bacteria. There are two isoenzymes, a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The subunits C of both isoenzymes (FwdC/FmdC) are characterized by a repeated GXXGXXXG motif. Pssm-ID: 238480 [Multi-domain] Cd Length: 203 Bit Score: 283.09 E-value: 3.90e-97
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| GXGXG | pfam01493 | GXGXG motif; This domain is found in glutamate synthase, tungsten formylmethanofuran ... |
102-207 | 3.37e-12 | |||||
GXGXG motif; This domain is found in glutamate synthase, tungsten formylmethanofuran dehydrogenase subunit c (FwdC) and molybdenum formylmethanofuran dehydrogenase subunit c (FmdC). A repeated G-XX-G-XXX-G motif is seen in the alignment. Pssm-ID: 460231 [Multi-domain] Cd Length: 190 Bit Score: 63.59 E-value: 3.37e-12
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| Name | Accession | Description | Interval | E-value | |||||
| one_C_dehyd_C | TIGR03122 | formylmethanofuran dehydrogenase subunit C; Members of this largely archaeal protein family ... |
4-258 | 5.60e-124 | |||||
formylmethanofuran dehydrogenase subunit C; Members of this largely archaeal protein family are subunit C of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit C. Note that this model does not distinguish tungsten (FwdC) from molybdenum-containing (FmdC) forms of this enzyme. Pssm-ID: 274439 [Multi-domain] Cd Length: 257 Bit Score: 353.18 E-value: 5.60e-124
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| FwdC | COG2218 | Formylmethanofuran dehydrogenase subunit C [Energy production and conversion]; |
1-258 | 8.50e-121 | |||||
Formylmethanofuran dehydrogenase subunit C [Energy production and conversion]; Pssm-ID: 441820 [Multi-domain] Cd Length: 264 Bit Score: 345.26 E-value: 8.50e-121
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| FwdC/FmdC | cd00980 | FwdC/FmdC. This domain of unknown function is found in the subunit C of formylmethanofuran ... |
45-246 | 3.90e-97 | |||||
FwdC/FmdC. This domain of unknown function is found in the subunit C of formylmethanofuran dehydrogenase, an enzyme that catalyzes the first step in methane formation from CO2 in methanogenic archaea, hyperthermophiles and bacteria. There are two isoenzymes, a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The subunits C of both isoenzymes (FwdC/FmdC) are characterized by a repeated GXXGXXXG motif. Pssm-ID: 238480 [Multi-domain] Cd Length: 203 Bit Score: 283.09 E-value: 3.90e-97
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| GXGXG | cd00504 | GXGXG domain. This domain of unknown function is found at the C-terminus of the large subunit ... |
76-213 | 1.23e-45 | |||||
GXGXG domain. This domain of unknown function is found at the C-terminus of the large subunit (gltB) of glutamate synthase (GltS), in subunit C of tungsten formylmethanofuran dehydrogenase (FwdC) and in subunit C of molybdenum formylmethanofuran dehydrogenase (FmdC). It is also found in a primarily archeal group of proteins predicted to encode part of the large subunit of GltS. It is characterized by a repeated GXXGXXXG motif. GltS is a complex iron-sulfur flavoprotein that catalyzes the synthesis of L-glutamate from L-glutamine and 2-oxoglutarate. It requires the transfer of ammonia and electrons among three distinct active centers that carry out L-Gln hydrolysis, conversion of 2-oxoglutarate into L-Glu, and electron uptake from a donor. These catalytic sites occur in other domains within the protein or or encoded by separate genes, and are not present in the domain in this CD. FwdC and FmdC are reversible ion pumps that catalyze the formylation and deformylation of methanofuran in hyperthermophiles and bacteria. They require the presence of either tungstun (FwdC) or molybdenum (FmdC). The specific function of this domain also remains unidentified in the formylmethanofuran dehydrogenases. Pssm-ID: 238281 [Multi-domain] Cd Length: 149 Bit Score: 150.03 E-value: 1.23e-45
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| arch_gltB | cd00981 | Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown ... |
62-196 | 4.78e-17 | |||||
Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown function found in the large subunit of glutamate synthase, which is encoded by gltB and found in most bacteria and eukaryotes. It is predicted to be homologous to the C-terminal domain of glutamate synthase based upon sequence similarity coupled with genome organization data, showing that this domain is found in a gene cluster with other domains of Glts, which are annotated. This domain is found primarily in archaea, but is also present in a few bacteria, likely as a result of lateral gene transfer. Pssm-ID: 238481 [Multi-domain] Cd Length: 232 Bit Score: 77.72 E-value: 4.78e-17
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| arch_gltB | cd00981 | Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown ... |
96-226 | 4.58e-14 | |||||
Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown function found in the large subunit of glutamate synthase, which is encoded by gltB and found in most bacteria and eukaryotes. It is predicted to be homologous to the C-terminal domain of glutamate synthase based upon sequence similarity coupled with genome organization data, showing that this domain is found in a gene cluster with other domains of Glts, which are annotated. This domain is found primarily in archaea, but is also present in a few bacteria, likely as a result of lateral gene transfer. Pssm-ID: 238481 [Multi-domain] Cd Length: 232 Bit Score: 69.64 E-value: 4.58e-14
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| arch_gltB | cd00981 | Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown ... |
51-157 | 1.35e-12 | |||||
Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown function found in the large subunit of glutamate synthase, which is encoded by gltB and found in most bacteria and eukaryotes. It is predicted to be homologous to the C-terminal domain of glutamate synthase based upon sequence similarity coupled with genome organization data, showing that this domain is found in a gene cluster with other domains of Glts, which are annotated. This domain is found primarily in archaea, but is also present in a few bacteria, likely as a result of lateral gene transfer. Pssm-ID: 238481 [Multi-domain] Cd Length: 232 Bit Score: 65.40 E-value: 1.35e-12
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| GXGXG | pfam01493 | GXGXG motif; This domain is found in glutamate synthase, tungsten formylmethanofuran ... |
102-207 | 3.37e-12 | |||||
GXGXG motif; This domain is found in glutamate synthase, tungsten formylmethanofuran dehydrogenase subunit c (FwdC) and molybdenum formylmethanofuran dehydrogenase subunit c (FmdC). A repeated G-XX-G-XXX-G motif is seen in the alignment. Pssm-ID: 460231 [Multi-domain] Cd Length: 190 Bit Score: 63.59 E-value: 3.37e-12
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| gltB_C | cd00982 | gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate ... |
102-211 | 7.90e-08 | |||||
gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate synthase (GltS). GltS encodes a complex iron-sulfur flavoprotein that catalyzes the synthesis of L-glutamate from L-glutamine and 2-oxoglutarate. It requires the transfer of ammonia and electrons among three distinct active centers that carry out L-Gln hydrolysis, conversion of 2-oxoglutarate into L-Glu, and electron uptake from a donor. These catalytic sites appear to occur in other domains within the protein, and not the domain in this CD. This particular domain has no known function, but it likely has a structural role as it interacts with the amidotransferase and FMN-binding domains of gltS. Pssm-ID: 238482 [Multi-domain] Cd Length: 251 Bit Score: 51.76 E-value: 7.90e-08
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| GXGXG | pfam01493 | GXGXG motif; This domain is found in glutamate synthase, tungsten formylmethanofuran ... |
121-214 | 8.99e-08 | |||||
GXGXG motif; This domain is found in glutamate synthase, tungsten formylmethanofuran dehydrogenase subunit c (FwdC) and molybdenum formylmethanofuran dehydrogenase subunit c (FmdC). A repeated G-XX-G-XXX-G motif is seen in the alignment. Pssm-ID: 460231 [Multi-domain] Cd Length: 190 Bit Score: 50.88 E-value: 8.99e-08
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| GXGXG | cd00504 | GXGXG domain. This domain of unknown function is found at the C-terminus of the large subunit ... |
156-217 | 1.02e-04 | |||||
GXGXG domain. This domain of unknown function is found at the C-terminus of the large subunit (gltB) of glutamate synthase (GltS), in subunit C of tungsten formylmethanofuran dehydrogenase (FwdC) and in subunit C of molybdenum formylmethanofuran dehydrogenase (FmdC). It is also found in a primarily archeal group of proteins predicted to encode part of the large subunit of GltS. It is characterized by a repeated GXXGXXXG motif. GltS is a complex iron-sulfur flavoprotein that catalyzes the synthesis of L-glutamate from L-glutamine and 2-oxoglutarate. It requires the transfer of ammonia and electrons among three distinct active centers that carry out L-Gln hydrolysis, conversion of 2-oxoglutarate into L-Glu, and electron uptake from a donor. These catalytic sites occur in other domains within the protein or or encoded by separate genes, and are not present in the domain in this CD. FwdC and FmdC are reversible ion pumps that catalyze the formylation and deformylation of methanofuran in hyperthermophiles and bacteria. They require the presence of either tungstun (FwdC) or molybdenum (FmdC). The specific function of this domain also remains unidentified in the formylmethanofuran dehydrogenases. Pssm-ID: 238281 [Multi-domain] Cd Length: 149 Bit Score: 41.40 E-value: 1.02e-04
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| gltB_C | cd00982 | gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate ... |
121-214 | 4.59e-03 | |||||
gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate synthase (GltS). GltS encodes a complex iron-sulfur flavoprotein that catalyzes the synthesis of L-glutamate from L-glutamine and 2-oxoglutarate. It requires the transfer of ammonia and electrons among three distinct active centers that carry out L-Gln hydrolysis, conversion of 2-oxoglutarate into L-Glu, and electron uptake from a donor. These catalytic sites appear to occur in other domains within the protein, and not the domain in this CD. This particular domain has no known function, but it likely has a structural role as it interacts with the amidotransferase and FMN-binding domains of gltS. Pssm-ID: 238482 [Multi-domain] Cd Length: 251 Bit Score: 37.51 E-value: 4.59e-03
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