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Conserved domains on  [gi|499349602|ref|WP_011038895|]
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glycoside hydrolase family 3 N-terminal domain-containing protein [Xanthomonas campestris]

Protein Classification

glycoside hydrolase family 3 protein( domain architecture ID 1001238)

glycoside hydrolase family 3 (GH3) protein containing carbohydrate binding module 6 (CBM6) includes beta-glucosidase (hydrolyzes beta-galactosidase) and beta-xylosidase (hydrolyzes 1,4-beta-D-xylosidase activities

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15098 super family cl33080
beta-glucosidase BglX;
6-721 0e+00

beta-glucosidase BglX;


The actual alignment was detected with superfamily member PRK15098:

Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 731.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   6 IDSLIARMTVEEKVGQLGVFAdmvrpFAPDvNPEanvlnaDEVLQQVRQGRVGSLFNGVGAALGVQIQKVAVEESRLGIP 85
Cdd:PRK15098  38 VTDLLKKMTLDEKIGQLRLIS-----VGPD-NPK------EAIREMIKAGQVGAIFNTVTRQDIRAMQDQVMQLSRLKIP 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  86 VILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVLGMAFA 165
Cdd:PRK15098 106 LFFAYDVVHGQRTVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEGFGEDTYLTSIMG 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 166 AARVRGFQGSDLKADDCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVPASA 245
Cdd:PRK15098 186 KTMVKAMQGKSPADRYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKAGLDAGSGGVMVALNSLNGTPATS 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 246 NHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMATLDAS 325
Cdd:PRK15098 266 DSWLLKDLLRDQWGFKGITVSDHGAIKELIKHGVAADPEDAVRLALKSGIDMSMSDEYYSKYLPGLVKSGKVTMAELDDA 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 326 VRRILQLKEAIGLFDNPYRSLDPARE--ADT-AHLPAHDALSRDAARRSIVLLKNEGDLLPLKKSGQnIALIGPFVQDRE 402
Cdd:PRK15098 346 VRHVLNVKYDMGLFNDPYSHLGPKESdpVDTnAESRLHRKEAREVARESLVLLKNRLETLPLKKSGT-IAVVGPLADSQR 424

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 403 NIEGCWTLFGDKERYVTLEQGVRAVVaADNLSVVAGCG--------------------LEEPLPGG--ISAAIDAAQAAD 460
Cdd:PRK15098 425 DVMGSWSAAGVADQSVTVLQGIKNAV-GDKAKVLYAKGanvtddkgiidflnqyeeavKVDPRSPQamIDEAVQAAKQAD 503

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 461 VVVLALGEPQRFSGEAQSRTEITLPPAQQALAEAVAATGTPMVILLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVAD 540
Cdd:PRK15098 504 VVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIAD 583

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 541 VLFGDYNPSARLPISFPQVTGQQPYFYNHLRTGRPELP-TLSEYKARWREMPNEPLYPFGHGLSYTTFAYAAPQLSTTQL 619
Cdd:PRK15098 584 VLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRPYNPdKPNKYTSRYFDEANGPLYPFGYGLSYTTFTVSDVKLSSPTM 663

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 620 GWEQTLTITTRVTNTGTVAGEEVVQLYVHDRVASRVRPVRELKGFRKVLLQPGESAEVVFTLQRDALAFTNHKGVFGAEP 699
Cdd:PRK15098 664 KRDGKVTASVTVTNTGKREGATVVQLYLQDVTASMSRPVKELKGFEKIMLKPGETQTVSFPIDIEALKFWNQQMKYVAEP 743

                        730       740
                 ....*....|....*....|..
gi 499349602 700 GLFDVWVCASAKSGEPVSFELL 721
Cdd:PRK15098 744 GKFNVFIGLDSARVKQGSFELL 765
 
Name Accession Description Interval E-value
PRK15098 PRK15098
beta-glucosidase BglX;
6-721 0e+00

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 731.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   6 IDSLIARMTVEEKVGQLGVFAdmvrpFAPDvNPEanvlnaDEVLQQVRQGRVGSLFNGVGAALGVQIQKVAVEESRLGIP 85
Cdd:PRK15098  38 VTDLLKKMTLDEKIGQLRLIS-----VGPD-NPK------EAIREMIKAGQVGAIFNTVTRQDIRAMQDQVMQLSRLKIP 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  86 VILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVLGMAFA 165
Cdd:PRK15098 106 LFFAYDVVHGQRTVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEGFGEDTYLTSIMG 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 166 AARVRGFQGSDLKADDCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVPASA 245
Cdd:PRK15098 186 KTMVKAMQGKSPADRYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKAGLDAGSGGVMVALNSLNGTPATS 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 246 NHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMATLDAS 325
Cdd:PRK15098 266 DSWLLKDLLRDQWGFKGITVSDHGAIKELIKHGVAADPEDAVRLALKSGIDMSMSDEYYSKYLPGLVKSGKVTMAELDDA 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 326 VRRILQLKEAIGLFDNPYRSLDPARE--ADT-AHLPAHDALSRDAARRSIVLLKNEGDLLPLKKSGQnIALIGPFVQDRE 402
Cdd:PRK15098 346 VRHVLNVKYDMGLFNDPYSHLGPKESdpVDTnAESRLHRKEAREVARESLVLLKNRLETLPLKKSGT-IAVVGPLADSQR 424

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 403 NIEGCWTLFGDKERYVTLEQGVRAVVaADNLSVVAGCG--------------------LEEPLPGG--ISAAIDAAQAAD 460
Cdd:PRK15098 425 DVMGSWSAAGVADQSVTVLQGIKNAV-GDKAKVLYAKGanvtddkgiidflnqyeeavKVDPRSPQamIDEAVQAAKQAD 503

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 461 VVVLALGEPQRFSGEAQSRTEITLPPAQQALAEAVAATGTPMVILLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVAD 540
Cdd:PRK15098 504 VVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIAD 583

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 541 VLFGDYNPSARLPISFPQVTGQQPYFYNHLRTGRPELP-TLSEYKARWREMPNEPLYPFGHGLSYTTFAYAAPQLSTTQL 619
Cdd:PRK15098 584 VLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRPYNPdKPNKYTSRYFDEANGPLYPFGYGLSYTTFTVSDVKLSSPTM 663

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 620 GWEQTLTITTRVTNTGTVAGEEVVQLYVHDRVASRVRPVRELKGFRKVLLQPGESAEVVFTLQRDALAFTNHKGVFGAEP 699
Cdd:PRK15098 664 KRDGKVTASVTVTNTGKREGATVVQLYLQDVTASMSRPVKELKGFEKIMLKPGETQTVSFPIDIEALKFWNQQMKYVAEP 743

                        730       740
                 ....*....|....*....|..
gi 499349602 700 GLFDVWVCASAKSGEPVSFELL 721
Cdd:PRK15098 744 GKFNVFIGLDSARVKQGSFELL 765
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
13-469 3.53e-137

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 411.79  E-value: 3.53e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  13 MTVEEKVGQLGVFADmvrpfapdvnpeanvlnADEVLQQVRQGRVGSLFNG---VGAALGVQIQKVaveeSRLGIPVILA 89
Cdd:COG1472    1 MTLEEKIGQLFQVGV-----------------TGEGAELIREGHVGGVILFdpaQWAELTNELQRA----TRLGIPLLIG 59

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  90 ADVIHGMR-------TVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVLGM 162
Cdd:COG1472   60 TDAEHGVAnrpaggaTVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVG 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 163 AFAAARVRGFQGSDLkaddclLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVP 242
Cdd:COG1472  140 RMAAAYVRGLQGNGV------AATAKHFAGHGDEETGRHTGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGVP 213

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 243 ASANHELLTEILRGEWQFPGVVISDYTADMELIAHGyaaDERDATKKAFLAGLDLSMQSG-FYAAHLPSLVESGEVPMAT 321
Cdd:COG1472  214 ATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAEHY---DPAEAAVLALNAGLDLEMPGGkAFIAALLEAVESGELSEER 290

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 322 LDASVRRILQLKEAIGLFDNPYRslDPAREADTAHLPAHDALSRDAARRSIVLLKNEGDLLPLKKSGQNIALIGPFVQDR 401
Cdd:COG1472  291 IDEAVRRILRLKFRLGLFDDPYV--DPERAAEVVGSPEHRALAREAARESIVLLKNDNGLLPLAALAAGGALAADAAAAA 368

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499349602 402 ENIEGCWTLFGDKERYVTLEQGVRAVVAADNLSVVAGCGLEEPLPGGISAAIDAAQAADVVVLALGEP 469
Cdd:COG1472  369 AAAAAAAAAAAAAAAAAAAAALLEAAAGADAALALAAAAAALLLVAAAALVAVVALAAALAVLLLLVL 436
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
14-332 3.48e-81

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 261.19  E-value: 3.48e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   14 TVEEKVGQLGVfadmvrpfaPDVNPEANvlnADEVLQQVRQGRVGSLFNG-------VGAALGVQIQKVAVEESRLGIPV 86
Cdd:pfam00933   1 TLDEKIGQLLQ---------VEVGEGKP---SHEEAELLKDYHVGGIILFggnledwVQLSDLIRYQRQAVEESRLGIPL 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   87 ILAADVIHGMR------TVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVL 160
Cdd:pfam00933  69 LVAVDQEGGRVqrfgegTMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDVARDPRWGIGERSFSEDPQL 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  161 GMAFAAARVRGFQGSDlkaddcLLATPKHFAAYGAVAA--GMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSS---F 235
Cdd:pfam00933 149 VSALAGAMIEGLQGAG------VLATVKHFPGHGHGATdsHKETPTTPRPEQRLRTVDLLPFQAAIEAGVDAVMAAhviY 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  236 NDINGVPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGyaaDERDATKKAFLAGLDLSMQSGFYAAHLPSLVESG 315
Cdd:pfam00933 223 SSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIADHG---GPAEAVRRALEAGVDIALVPEERTKYLKKVVKNG 299

                         330
                  ....*....|....*..
gi 499349602  316 EVPMATLDASVRRILQL 332
Cdd:pfam00933 300 KLPMARIDAAVRRVLRL 316
 
Name Accession Description Interval E-value
PRK15098 PRK15098
beta-glucosidase BglX;
6-721 0e+00

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 731.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   6 IDSLIARMTVEEKVGQLGVFAdmvrpFAPDvNPEanvlnaDEVLQQVRQGRVGSLFNGVGAALGVQIQKVAVEESRLGIP 85
Cdd:PRK15098  38 VTDLLKKMTLDEKIGQLRLIS-----VGPD-NPK------EAIREMIKAGQVGAIFNTVTRQDIRAMQDQVMQLSRLKIP 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  86 VILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVLGMAFA 165
Cdd:PRK15098 106 LFFAYDVVHGQRTVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEGFGEDTYLTSIMG 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 166 AARVRGFQGSDLKADDCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVPASA 245
Cdd:PRK15098 186 KTMVKAMQGKSPADRYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKAGLDAGSGGVMVALNSLNGTPATS 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 246 NHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPSLVESGEVPMATLDAS 325
Cdd:PRK15098 266 DSWLLKDLLRDQWGFKGITVSDHGAIKELIKHGVAADPEDAVRLALKSGIDMSMSDEYYSKYLPGLVKSGKVTMAELDDA 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 326 VRRILQLKEAIGLFDNPYRSLDPARE--ADT-AHLPAHDALSRDAARRSIVLLKNEGDLLPLKKSGQnIALIGPFVQDRE 402
Cdd:PRK15098 346 VRHVLNVKYDMGLFNDPYSHLGPKESdpVDTnAESRLHRKEAREVARESLVLLKNRLETLPLKKSGT-IAVVGPLADSQR 424

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 403 NIEGCWTLFGDKERYVTLEQGVRAVVaADNLSVVAGCG--------------------LEEPLPGG--ISAAIDAAQAAD 460
Cdd:PRK15098 425 DVMGSWSAAGVADQSVTVLQGIKNAV-GDKAKVLYAKGanvtddkgiidflnqyeeavKVDPRSPQamIDEAVQAAKQAD 503

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 461 VVVLALGEPQRFSGEAQSRTEITLPPAQQALAEAVAATGTPMVILLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVAD 540
Cdd:PRK15098 504 VVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIAD 583

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 541 VLFGDYNPSARLPISFPQVTGQQPYFYNHLRTGRPELP-TLSEYKARWREMPNEPLYPFGHGLSYTTFAYAAPQLSTTQL 619
Cdd:PRK15098 584 VLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRPYNPdKPNKYTSRYFDEANGPLYPFGYGLSYTTFTVSDVKLSSPTM 663

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 620 GWEQTLTITTRVTNTGTVAGEEVVQLYVHDRVASRVRPVRELKGFRKVLLQPGESAEVVFTLQRDALAFTNHKGVFGAEP 699
Cdd:PRK15098 664 KRDGKVTASVTVTNTGKREGATVVQLYLQDVTASMSRPVKELKGFEKIMLKPGETQTVSFPIDIEALKFWNQQMKYVAEP 743

                        730       740
                 ....*....|....*....|..
gi 499349602 700 GLFDVWVCASAKSGEPVSFELL 721
Cdd:PRK15098 744 GKFNVFIGLDSARVKQGSFELL 765
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
13-469 3.53e-137

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 411.79  E-value: 3.53e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  13 MTVEEKVGQLGVFADmvrpfapdvnpeanvlnADEVLQQVRQGRVGSLFNG---VGAALGVQIQKVaveeSRLGIPVILA 89
Cdd:COG1472    1 MTLEEKIGQLFQVGV-----------------TGEGAELIREGHVGGVILFdpaQWAELTNELQRA----TRLGIPLLIG 59

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  90 ADVIHGMR-------TVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVLGM 162
Cdd:COG1472   60 TDAEHGVAnrpaggaTVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVG 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 163 AFAAARVRGFQGSDLkaddclLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVP 242
Cdd:COG1472  140 RMAAAYVRGLQGNGV------AATAKHFAGHGDEETGRHTGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGVP 213

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 243 ASANHELLTEILRGEWQFPGVVISDYTADMELIAHGyaaDERDATKKAFLAGLDLSMQSG-FYAAHLPSLVESGEVPMAT 321
Cdd:COG1472  214 ATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAEHY---DPAEAAVLALNAGLDLEMPGGkAFIAALLEAVESGELSEER 290

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 322 LDASVRRILQLKEAIGLFDNPYRslDPAREADTAHLPAHDALSRDAARRSIVLLKNEGDLLPLKKSGQNIALIGPFVQDR 401
Cdd:COG1472  291 IDEAVRRILRLKFRLGLFDDPYV--DPERAAEVVGSPEHRALAREAARESIVLLKNDNGLLPLAALAAGGALAADAAAAA 368

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499349602 402 ENIEGCWTLFGDKERYVTLEQGVRAVVAADNLSVVAGCGLEEPLPGGISAAIDAAQAADVVVLALGEP 469
Cdd:COG1472  369 AAAAAAAAAAAAAAAAAAAAALLEAAAGADAALALAAAAAALLLVAAAALVAVVALAAALAVLLLLVL 436
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
14-332 3.48e-81

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 261.19  E-value: 3.48e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   14 TVEEKVGQLGVfadmvrpfaPDVNPEANvlnADEVLQQVRQGRVGSLFNG-------VGAALGVQIQKVAVEESRLGIPV 86
Cdd:pfam00933   1 TLDEKIGQLLQ---------VEVGEGKP---SHEEAELLKDYHVGGIILFggnledwVQLSDLIRYQRQAVEESRLGIPL 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602   87 ILAADVIHGMR------TVFPIPLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVL 160
Cdd:pfam00933  69 LVAVDQEGGRVqrfgegTMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDVARDPRWGIGERSFSEDPQL 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  161 GMAFAAARVRGFQGSDlkaddcLLATPKHFAAYGAVAA--GMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSS---F 235
Cdd:pfam00933 149 VSALAGAMIEGLQGAG------VLATVKHFPGHGHGATdsHKETPTTPRPEQRLRTVDLLPFQAAIEAGVDAVMAAhviY 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  236 NDINGVPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGyaaDERDATKKAFLAGLDLSMQSGFYAAHLPSLVESG 315
Cdd:pfam00933 223 SSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIADHG---GPAEAVRRALEAGVDIALVPEERTKYLKKVVKNG 299

                         330
                  ....*....|....*..
gi 499349602  316 EVPMATLDASVRRILQL 332
Cdd:pfam00933 300 KLPMARIDAAVRRVLRL 316
PLN03080 PLN03080
Probable beta-xylosidase; Provisional
 71-693 4.35e-71

Probable beta-xylosidase; Provisional


Pssm-ID: 178629 [Multi-domain]  Cd Length: 779  Bit Score: 247.08  E-value: 4.35e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  71 QIQKVAVEESRLGIPVI-LAADVIHGM----------------RTVFPIPLGEAASFEPELAERTARATAIEATA----- 128
Cdd:PLN03080  68 QLSNTAAGVPRLGIPPYeWWSESLHGLadngpgvsfnsgpvsaATSFPQVILSAASFNRSLWRAIGSAIAVEARAmynag 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 129 -AGLHWtYAPAVDIARDQRWGRGAEGAGEDVVLGMAFAAARVRGFQGSDLK------ADDCLL--ATPKHFAAYGAVAAG 199
Cdd:PLN03080 148 qAGLTF-WAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKWKkvrddgEDGKLMlsACCKHYTAYDLEKWG 226

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 200 ----MEYNTVdIAPQTLRDVHLPPFKAAFDAG-ALTVMSSFNDINGVPASANHELLTEIlRGEWQFPGVVISDytADMEL 274
Cdd:PLN03080 227 nfsrYTFNAV-VTEQDMEDTYQPPFKSCIQEGkASCLMCSYNQVNGVPACARKDLLQKA-RDEWGFQGYITSD--CDAVA 302

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 275 IAH---GYAADERDATKKAFLAGLDLSMQSgFYAAHLPSLVESGEVPMATLDASVRRILQLKEAIGLFDNP-----YRSL 346
Cdd:PLN03080 303 TIFeyqTYTKSPEDAVADVLKAGMDINCGS-YMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDprngwYGKL 381

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 347 DPAREADTahlpAHDALSRDAARRSIVLLKNEGDLLPLKKSG-QNIALIGPFVQDRENIEGCWTlfGDKERYVTLEQGVR 425
Cdd:PLN03080 382 GPNNVCTK----EHRELALEAARQGIVLLKNDKKFLPLNKSEvSSLAIIGPMANDPYNLGGDYT--GVPCQPTTLFKGLQ 455

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 426 AVVaaDNLSVVAGCgLEEPLPG--GISAAIDAAQAADVVVLALGEPQRFSGEAQSRTEITLPPAQQALAEAVAA-TGTPM 502
Cdd:PLN03080 456 AYV--KKTSFAAGC-KDVSCNSdtGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASvSKKPV 532

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 503 VILLRNGRALALSGAVRDADAIAVTW--YLGTQTGTGVADVLFGDYNPSARLPIS-FPQVTGQQPYFYNHLRtgrpelPT 579
Cdd:PLN03080 533 VLVLTGGGPVDVSFAKQDPRIASILWigYPGEVGGQALAEIIFGDYNPGGRLPMTwYPESFTAVPMTDMNMR------AD 606

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 580 LSE-YKAR-WREMPNEPLYPFGHGLSYTTFAY---AAP-QLSTTQLGWEQTLT--------------------------- 626
Cdd:PLN03080 607 PSRgYPGRtYRFYTGDVVYGFGYGLSYTKFSYkilSAPkKLSLSRSSVQDSISrkpllqrrdeldyvqiediasceslrf 686

                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499349602 627 -ITTRVTNTGTVAGEEVVQLYvhDRVASRVR--PVRELKGFRKVLLQPGESAEVVFTLQR-DALAFTNHKG 693
Cdd:PLN03080 687 nVHISVSNVGEMDGSHVVMLF--SRSPPVVPgvPEKQLVGFDRVHTASGRSTETEIVVDPcKHLSVANEEG 755
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
 372-604 3.88e-55

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 187.91  E-value: 3.88e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  372 IVLLKNEGDLLPLKKSGQNIALIGPFVQDRENIEGCWTlFGDKERYVTLEQGVRAVVAAD----NLSVVAGCGLEEPLPG 447
Cdd:pfam01915   1 IVLLKNENGLLPLPKKAKKIAVIGPNADDPPNGGGGSG-TGNPPYLVTPLDGIRARAGDLyadgAHLTVILSNGTADDDA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  448 GISAAIDAAQAADVVVLALGEPQRFSGEAQSRTEITLPPAQQALAEAVAATGTPMVILLRNGRALALSGAVRD-ADAIAV 526
Cdd:pfam01915  80 GIAEAVAAAKDADVAIVFVGLDPETEGEGYDRTDLALPGNQDALIKAVAAAGKPTVVVLHSGGPVEMEPWAEEnVDAILA 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499349602  527 TWYLGTQTGTGVADVLFGDYNPSARLPISFPQVTGQQPYFYNHLRtgrpelptlseykarwrempnEPLYPFGHGLSY 604
Cdd:pfam01915 160 AWYPGQEGGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGPLL---------------------PDLYPEGYGLSY 216
Fn3-like pfam14310
Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is ...
 642-710 1.07e-24

Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is often found in association with pfam00933 and pfam01915. Its function is unknown.


Pssm-ID: 433860 [Multi-domain]  Cd Length: 70  Bit Score: 97.54  E-value: 1.07e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602  642 VVQLYVHDRVASRVRPVRELKGFRKVLLQPGESAEVVFTLQRDALAFTNHKGV-FGAEPGLFDVWVCASA 710
Cdd:pfam14310   1 VVQLYVRDPVSSVGRPVKELKGFEKVELAPGESKTVTFTLDRRDLSFWDEDGQrWVVEPGEYEVLVGSSS 70
PRK05337 PRK05337
beta-hexosaminidase; Provisional
 104-267 7.97e-05

beta-hexosaminidase; Provisional


Pssm-ID: 235417 [Multi-domain]  Cd Length: 337  Bit Score: 45.53  E-value: 7.97e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 104 LGEAASFEPELAERTARAT----AIEATAAGLHWTYAPAVDIARDQR-WGRGAEGAGEDVVLgmAFAAARVRGFQGSDLK 178
Cdd:PRK05337  84 FGALWDRDPLEALKLAEEAgwlmAAELRACGIDLSFAPVLDLDGISAvIGDRAFHRDPQVVA--ALASAFIDGMHAAGMA 161

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349602 179 AddcllaTPKHFAAYGAVAAGmeyNTVDIA-----PQTLRDVHLPPFKAAFDAGALTVMSS---FNDINGVPASANHELL 250
Cdd:PRK05337 162 A------TGKHFPGHGAVEAD---SHVETPvderpLEEIRAEDMAPFRALIAAGLDAVMPAhviYPQVDPRPAGFSRYWL 232

                        170
                 ....*....|....*..
gi 499349602 251 TEILRGEWQFPGVVISD 267
Cdd:PRK05337 233 QDILRQELGFDGVIFSD 249
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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