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Conserved domains on  [gi|499349790|ref|WP_011039083|]
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MULTISPECIES: xanthomonadin biosynthesis acyl carrier protein XanC [Xanthomonas]

Protein Classification

acyl carrier protein; meromycolate extension acyl carrier protein( domain architecture ID 10013148)

acyl carrier protein may function as a carrier of the growing fatty acid chain in fatty acid biosynthesis or as the carrier of activated (amino) acid groups in polyketide synthases and non-ribosomal peptide synthases| meromycolate extension acyl carrier protein functions in the synthesis of long mycolic acids

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09184 PRK09184
acyl carrier protein; Provisional
 1-89 3.91e-48

acyl carrier protein; Provisional


:

Pssm-ID: 181682  Cd Length: 89  Bit Score: 147.51  E-value: 3.91e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349790  1 MSSQTAAERELAELLVESLNLEDVQPADIDPEAPLFNTGLGLDSIDALELALAISKRYGFQLRSDNDENRRIFASLRALS 80
Cdd:PRK09184  1 MSSMTALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALA 80


                ....*....
gi 499349790 81 AHVEANKTT 89
Cdd:PRK09184 81 AYVAAHRTK 89
 
Name Accession Description Interval E-value
PRK09184 PRK09184
acyl carrier protein; Provisional
 1-89 3.91e-48

acyl carrier protein; Provisional


Pssm-ID: 181682  Cd Length: 89  Bit Score: 147.51  E-value: 3.91e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349790  1 MSSQTAAERELAELLVESLNLEDVQPADIDPEAPLFNTGLGLDSIDALELALAISKRYGFQLRSDNDENRRIFASLRALS 80
Cdd:PRK09184  1 MSSMTALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALA 80


                ....*....
gi 499349790 81 AHVEANKTT 89
Cdd:PRK09184 81 AYVAAHRTK 89
AcpP COG0236
Acyl carrier protein [Lipid transport and metabolism]; Acyl carrier protein is part of the ...
 3-87 8.93e-12

Acyl carrier protein [Lipid transport and metabolism]; Acyl carrier protein is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440006 [Multi-domain]  Cd Length: 80  Bit Score: 55.24  E-value: 8.93e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349790  3 SQTAAERELAELLVESLNLEdvqPADIDPEAPLFNtGLGLDSIDALELALAISKRYGFQLRSDNDENrriFASLRALSAH 82
Cdd:COG0236   2 PREELEERLAEIIAEVLGVD---PEEITPDDSFFE-DLGLDSLDAVELIAALEEEFGIELPDTELFE---YPTVADLADY 74


                ....*
gi 499349790 83 VEANK 87
Cdd:COG0236  75 LEEKL 79
PP-binding pfam00550
Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached ...
 9-65 3.49e-06

Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.


Pssm-ID: 425746 [Multi-domain]  Cd Length: 62  Bit Score: 40.62  E-value: 3.49e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499349790   9 RELAELLVESLNLEdvqPADIDPEAPLFNtgLGLDSIDALELALAISKRYGFQLRSD 65
Cdd:pfam00550  1 ERLRELLAEVLGVP---AEEIDPDTDLFD--LGLDSLLAVELIARLEEEFGVEIPPS 52
 
Name Accession Description Interval E-value
PRK09184 PRK09184
acyl carrier protein; Provisional
 1-89 3.91e-48

acyl carrier protein; Provisional


Pssm-ID: 181682  Cd Length: 89  Bit Score: 147.51  E-value: 3.91e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349790  1 MSSQTAAERELAELLVESLNLEDVQPADIDPEAPLFNTGLGLDSIDALELALAISKRYGFQLRSDNDENRRIFASLRALS 80
Cdd:PRK09184  1 MSSMTALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALA 80


                ....*....
gi 499349790 81 AHVEANKTT 89
Cdd:PRK09184 81 AYVAAHRTK 89
AcpP COG0236
Acyl carrier protein [Lipid transport and metabolism]; Acyl carrier protein is part of the ...
 3-87 8.93e-12

Acyl carrier protein [Lipid transport and metabolism]; Acyl carrier protein is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440006 [Multi-domain]  Cd Length: 80  Bit Score: 55.24  E-value: 8.93e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349790  3 SQTAAERELAELLVESLNLEdvqPADIDPEAPLFNtGLGLDSIDALELALAISKRYGFQLRSDNDENrriFASLRALSAH 82
Cdd:COG0236   2 PREELEERLAEIIAEVLGVD---PEEITPDDSFFE-DLGLDSLDAVELIAALEEEFGIELPDTELFE---YPTVADLADY 74


                ....*
gi 499349790 83 VEANK 87
Cdd:COG0236  75 LEEKL 79
PP-binding pfam00550
Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached ...
 9-65 3.49e-06

Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.


Pssm-ID: 425746 [Multi-domain]  Cd Length: 62  Bit Score: 40.62  E-value: 3.49e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499349790   9 RELAELLVESLNLEdvqPADIDPEAPLFNtgLGLDSIDALELALAISKRYGFQLRSD 65
Cdd:pfam00550  1 ERLRELLAEVLGVP---AEEIDPDTDLFD--LGLDSLLAVELIARLEEEFGVEIPPS 52
PRK05350 PRK05350
acyl carrier protein; Provisional
 1-85 1.17e-05

acyl carrier protein; Provisional


Pssm-ID: 180033  Cd Length: 82  Bit Score: 39.59  E-value: 1.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499349790  1 MSSQTAAERELAELLVESLNLEdvqPADIDPEAPLFnTGLGLDSIDALELALAISKRYGFQLRSDNdenrriFASLRALS 80
Cdd:PRK05350  1 MMTREEILERLRAILVELFEID---PEDITPEANLY-EDLDLDSIDAVDLVVHLQKLTGKKIKPEE------FKSVRTVQ 70


                ....*
gi 499349790 81 AHVEA 85
Cdd:PRK05350 71 DVVDA 75
AcpA COG3433
Acyl carrier protein/domain [Lipid transport and metabolism, Secondary metabolites ...
 2-57 9.63e-03

Acyl carrier protein/domain [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442659 [Multi-domain]  Cd Length: 295  Bit Score: 33.18  E-value: 9.63e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 499349790   2 SSQTAAERELAELLVESLnleDVQPADIDPEAPLFNtgLGLDSIDALELALAISKR 57
Cdd:COG3433  215 LETALTEEELRADVAELL---GVDPEEIDPDDNLFD--LGLDSIRLMQLVERWRKA 265
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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