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Conserved domains on  [gi|499405416|ref|WP_011092883|]
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Sec-independent protein translocase subunit TatA [Pectobacterium atrosepticum]

Protein Classification

twin-arginine translocase TatA/TatE family subunit( domain architecture ID 10011693)

twin-arginine translocase TatA/TatE family subunit similar to Sec-independent protein translocase protein TatA, which may form the protein-conducting channel of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
tatE PRK01614
Sec-independent protein translocase subunit TatA;
1-55 3.98e-27

Sec-independent protein translocase subunit TatA;


:

Pssm-ID: 234965  Cd Length: 85  Bit Score: 93.42  E-value: 3.98e-27
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTA 55
Cdd:PRK01614  1 MEGLSITKLLVVGILIVLLFGTSKLRTLGADLGAALKGFKKAMRNDDEVSTSVLG 55
 
Name Accession Description Interval E-value
tatE PRK01614
Sec-independent protein translocase subunit TatA;
1-55 3.98e-27

Sec-independent protein translocase subunit TatA;


Pssm-ID: 234965  Cd Length: 85  Bit Score: 93.42  E-value: 3.98e-27
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTA 55
Cdd:PRK01614  1 MEGLSITKLLVVGILIVLLFGTSKLRTLGADLGAALKGFKKAMRNDDEVSTSVLG 55
tatAE TIGR01411
twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E ...
 3-49 9.30e-14

twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273605 [Multi-domain]  Cd Length: 47  Bit Score: 58.39  E-value: 9.30e-14
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 499405416   3 GISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSV 49
Cdd:TIGR01411  1 GLSPPEWLIILVVILLLFGAKKLPELGRDLGKAIKEFKKALKEEEDE 47
TatA COG1826
Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, ...
 1-48 9.81e-13

Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441431 [Multi-domain]  Cd Length: 72  Bit Score: 56.48  E-value: 9.81e-13
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*...
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQS 48
Cdd:COG1826   1 MFGIGFWELLIILVVALLVFGPKKLPELARSLGKAIREFKKAANEVKE 48
TatA_B_E pfam02416
mttA/Hcf106 family; Members of this protein family are involved in a sec independent ...
 4-50 3.11e-08

mttA/Hcf106 family; Members of this protein family are involved in a sec independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts. Members of this family in E.coli are involved in export of redox proteins with a "twin arginine" leader motif.


Pssm-ID: 426762  Cd Length: 53  Bit Score: 44.60  E-value: 3.11e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 499405416   4 ISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVK 50
Cdd:pfam02416  1 LGIPELLIILVVALLLFGPKKLPELGRALGKTLREFKKATKELEEED 47
 
Name Accession Description Interval E-value
tatE PRK01614
Sec-independent protein translocase subunit TatA;
1-55 3.98e-27

Sec-independent protein translocase subunit TatA;


Pssm-ID: 234965  Cd Length: 85  Bit Score: 93.42  E-value: 3.98e-27
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTA 55
Cdd:PRK01614  1 MEGLSITKLLVVGILIVLLFGTSKLRTLGADLGAALKGFKKAMRNDDEVSTSVLG 55
tatE PRK03625
twin-arginine translocase subunit TatE;
1-48 7.01e-23

twin-arginine translocase subunit TatE;


Pssm-ID: 179612  Cd Length: 67  Bit Score: 82.12  E-value: 7.01e-23
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*...
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQS 48
Cdd:PRK03625  1 MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDA 48
tatA PRK04598
twin-arginine translocase subunit TatA;
1-56 1.23e-20

twin-arginine translocase subunit TatA;


Pssm-ID: 179867  Cd Length: 81  Bit Score: 76.82  E-value: 1.23e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTAA 56
Cdd:PRK04598  1 MGGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESAKANKKDA 56
tatA PRK01833
Sec-independent protein translocase subunit TatA;
1-48 3.03e-16

Sec-independent protein translocase subunit TatA;


Pssm-ID: 167284  Cd Length: 74  Bit Score: 65.28  E-value: 3.03e-16
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*...
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQS 48
Cdd:PRK01833  1 MGGISIWQLLIIVAIIVLLFGTKKLRTLGTDLGESVKGFKKAMADDKP 48
tatA PRK03554
Sec-independent protein translocase subunit TatA;
1-63 3.28e-15

Sec-independent protein translocase subunit TatA;


Pssm-ID: 179592  Cd Length: 89  Bit Score: 63.16  E-value: 3.28e-15
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSvKTDDTAALNDSSRK 63
Cdd:PRK03554  1 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEP-KQDKTSQDADFTAK 62
tatA PRK00442
twin-arginine translocase TatA/TatE family subunit;
10-56 1.59e-14

twin-arginine translocase TatA/TatE family subunit;


Pssm-ID: 234764  Cd Length: 92  Bit Score: 61.43  E-value: 1.59e-14
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 499405416 10 LVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQsvKTDDTAA 56
Cdd:PRK00442 10 IVILVVVVLVFGTKKLKNLGSDVGESIKGFRKAMNEDE--KEDKPAE 54
tatAE TIGR01411
twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E ...
 3-49 9.30e-14

twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273605 [Multi-domain]  Cd Length: 47  Bit Score: 58.39  E-value: 9.30e-14
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 499405416   3 GISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSV 49
Cdd:TIGR01411  1 GLSPPEWLIILVVILLLFGAKKLPELGRDLGKAIKEFKKALKEEEDE 47
tatA PRK02958
Sec-independent protein translocase subunit TatA;
1-61 2.13e-13

Sec-independent protein translocase subunit TatA;


Pssm-ID: 235091  Cd Length: 73  Bit Score: 58.05  E-value: 2.13e-13
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTAALNDSS 61
Cdd:PRK02958  1 MGSFSIWHWLIVLVIVVLVFGTKKLRNIGSDLGGAVKGFKDGMKEGETPQEAQAQQLPDSG 61
TatA COG1826
Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, ...
 1-48 9.81e-13

Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441431 [Multi-domain]  Cd Length: 72  Bit Score: 56.48  E-value: 9.81e-13
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*...
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQS 48
Cdd:COG1826   1 MFGIGFWELLIILVVALLVFGPKKLPELARSLGKAIREFKKAANEVKE 48
tatA PRK14860
twin arginine translocase protein A; Provisional
 1-64 1.13e-09

twin arginine translocase protein A; Provisional


Pssm-ID: 184862  Cd Length: 64  Bit Score: 48.58  E-value: 1.13e-09
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTAALNDSSRKE 64
Cdd:PRK14860  1 MFGFGMPELIVILVIALVVFGPAKLPQLGQALGGAIRNFKKASNEEDVVTINNEKGKEDQARSD 64
tatA PRK00720
twin-arginine translocase TatA/TatE family subunit;
1-56 6.47e-09

twin-arginine translocase TatA/TatE family subunit;


Pssm-ID: 234822  Cd Length: 78  Bit Score: 46.96  E-value: 6.47e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDTAA 56
Cdd:PRK00720  1 MGSFSIWHWLIVLAVVLLLFGRGKISELMGDVAKGIKSFKKGMADDDAPPAEPPEP 56
tatA PRK14857
TatA/E family twin arginine-targeting protein translocase;
3-48 7.63e-09

TatA/E family twin arginine-targeting protein translocase;


Pssm-ID: 184859  Cd Length: 90  Bit Score: 47.02  E-value: 7.63e-09
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 499405416  3 GISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQS 48
Cdd:PRK14857  5 GIGLPEMAVILVIALLVFGPKKLPEIGRSLGKTLKGFQEASKEFEN 50
tatA PRK14859
twin arginine translocase protein A; Provisional
 1-54 1.56e-08

twin arginine translocase protein A; Provisional


Pssm-ID: 184861  Cd Length: 63  Bit Score: 45.49  E-value: 1.56e-08
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTDDT 54
Cdd:PRK14859  1 MFGIGMPELIVILVIVLIVFGAGKLPEIGGGLGKSIKNFKKATSEKEEIEIKPT 54
TatA_B_E pfam02416
mttA/Hcf106 family; Members of this protein family are involved in a sec independent ...
 4-50 3.11e-08

mttA/Hcf106 family; Members of this protein family are involved in a sec independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts. Members of this family in E.coli are involved in export of redox proteins with a "twin arginine" leader motif.


Pssm-ID: 426762  Cd Length: 53  Bit Score: 44.60  E-value: 3.11e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 499405416   4 ISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVK 50
Cdd:pfam02416  1 LGIPELLIILVVALLLFGPKKLPELGRALGKTLREFKKATKELEEED 47
tatA PRK04561
twin arginine translocase protein A; Provisional
 1-62 3.88e-08

twin arginine translocase protein A; Provisional


Pssm-ID: 179864  Cd Length: 75  Bit Score: 44.91  E-value: 3.88e-08
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSvktdDTAALNDSSR 62
Cdd:PRK04561  1 MGSFSIWHWLVVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDK----PAGQLGDDSR 58
tatA PRK01470
twin arginine translocase protein A; Provisional
 3-52 1.04e-05

twin arginine translocase protein A; Provisional


Pssm-ID: 179298  Cd Length: 51  Bit Score: 38.30  E-value: 1.04e-05
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 499405416  3 GISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMNDDQSVKTD 52
Cdd:PRK01470  2 GMSFSHLLIVLLIIFVLFGAGKLPQVMSDLAKGLKAFKDGMKDDGSDNDK 51
tatA PRK14861
twin arginine translocase protein A; Provisional
 1-45 2.71e-04

twin arginine translocase protein A; Provisional


Pssm-ID: 237837  Cd Length: 61  Bit Score: 34.94  E-value: 2.71e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMND 45
Cdd:PRK14861  2 FSNIGFPGLILILVVALIIFGPKKLPELGKALGKTLREFKKATKE 46
tatA PRK00575
Sec-independent protein translocase subunit TatA;
1-56 4.05e-04

Sec-independent protein translocase subunit TatA;


Pssm-ID: 234797 [Multi-domain]  Cd Length: 92  Bit Score: 35.10  E-value: 4.05e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 499405416  1 MEGISIAKLLVIGALIVLLFGTNKL----RSLGGDLgAAIKGFKKAMNDDQsvKTDDTAA 56
Cdd:PRK00575  1 MGSLSPWHWAILAVVVILLFGAKKLpdaaRSLGKSL-RIFKSEVKEMQSDN--KAEASAA 57
tatA PRK14858
twin arginine translocase protein A; Provisional
 1-56 1.29e-03

twin arginine translocase protein A; Provisional


Pssm-ID: 184860  Cd Length: 108  Bit Score: 34.07  E-value: 1.29e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499405416   1 MEGISIAKLLVIGALIVLLFGTNKLRSLGGDLGAAIKGFKKAMND-DQSVKTDDTAA 56
Cdd:PRK14858   1 MFGIGMPELIVILVIALIVIGPQKLPDLARSLGRGLAEFKKATDDfKQSMQEESRTA 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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