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Concise Results
Standard Results
Full Results
DHH family phosphoesterase [Clostridium tetani]
Protein Classification
DHH family phosphoesterase ( domain architecture ID 11467548 )
DHH family phosphoesterase such as Bacillus subtilis cyclic-di-AMP phosphodiesterase GdpP and Listeria monocytogenes cyclic-di-AMP phosphodiesterase PdeA
List of domain hits
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
1-663
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 874.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 1 M GS K -- YK KL ITPTKGYIVISAV L IM I IMYQ N VL IG VFF L IIY ILLL IH NIK SNKI R KDQWKEF IE NF SY NL D S A TRNT L 78
Cdd:COG3887 1 M KK K lk KR KL RPLLLVLLLLLLL L LI I LLFY N WI IG LLG L LLL ILLL YY NIK AERK R RRELEKY IE TL SY RV D K A GKEA L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 79 L N LP LPMLI L NNN G N I I WYN YS FS K I LDGK D V L EM S I E N I IN E FDIN K INDN E MSKLEN I K I FNG YY NI Y ANTLETNS tl 158
Cdd:COG3887 81 L E LP IGIVL L DED G E I E WYN PY FS E I FGDE D L L GK S L E D I FP E LNLD K LKEE E GEEPFT I T I GDR YY RV Y YKKVKDEE -- 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 159 skeg QK L I LLY LS DVTE VNRQLEYINNSKE VI ML I EV DN L D D V IK S TE E DKKP LL IA E IE R AI N SY A QNLSAM LK K Y DYN 238
Cdd:COG3887 159 ---- ED L R LLY FF DVTE YEELKKEYEEERP VI GI I FI DN Y D E V TQ S MD E SERS LL NS E VT R KL N DW A NEYGGF LK R Y SSD 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 239 K Y ILCIENQYI EK EM E K KF E ILD VVKD I NI GN KLM VTLSIG V G RN G ENPL E D G KF A T SA KE LALGRGGDQVVVK S G ENLD 318
Cdd:COG3887 235 R Y LAVMNEKIL EK LE E D KF S ILD EIRE I TS GN NIP VTLSIG I G YG G DSLA E L G EL A Q SA LD LALGRGGDQVVVK D G DKVR 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 319 FYGGKT KEL EKRT K V K ARV VSYV L LD LIKES NK VFIMGH I NPD I D CL G S A L G LYS I INS L E KE C YI I L EDI N T SI RT LM D 398
Cdd:COG3887 315 FYGGKT NAV EKRT R V R ARV IAHA L RE LIKES DN VFIMGH K NPD M D SI G A A I G VLR I AKM L G KE A YI V L DEV N P SI DR LM E 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 399 K IKEE QV Y NSI FI NSNK A I E K I DE N S LL II VD V H SKGH VE NMKVV EK SK K L V I IDHHR KSTDY IE GAL L S Y T EPYASSTS 478
Cdd:COG3887 395 E IKEE EE Y EDL FI SPEE A L E L I TK N T LL VV VD T H RPSL VE SPELL EK AE K V V V IDHHR RGEEF IE NPV L V Y I EPYASSTS 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 479 ELVTEL I QY MVE K PA L RAI EA E ALLAGI C VDTKNF YFK TGVRTFEAAS F L K R L GADTI D VK K L LSD DL N T HLKKY E I I KT 558
Cdd:COG3887 475 ELVTEL L QY QPD K IK L SKL EA T ALLAGI V VDTKNF TLR TGVRTFEAAS Y L R R N GADTI L VK Q L FKE DL D T YIARA E L I SS 554
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 559 V E V - KNN IA V A IC P Q DI Q - DTLL AAQ V ADEL I NI I GI YT SFVL V K VEND - I Y IS G RSLG D INVQ L I L E S LGGGGH M T M AG 635
Cdd:COG3887 555 A E I y RDG IA I A VG P E DI E y SQVI AAQ A ADEL L NI K GI EA SFVL T K RSDG k I G IS A RSLG E INVQ V I M E K LGGGGH L T N AG 634
650 660
....*....|....*....|....*...
gi 499410968 636 A K LKD M TIEEA LKE L QNS ID K YL S EG D E 663
Cdd:COG3887 635 A Q LKD V TIEEA KEQ L KEA ID E YL E EG E E 662
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
1-663
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 874.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 1 M GS K -- YK KL ITPTKGYIVISAV L IM I IMYQ N VL IG VFF L IIY ILLL IH NIK SNKI R KDQWKEF IE NF SY NL D S A TRNT L 78
Cdd:COG3887 1 M KK K lk KR KL RPLLLVLLLLLLL L LI I LLFY N WI IG LLG L LLL ILLL YY NIK AERK R RRELEKY IE TL SY RV D K A GKEA L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 79 L N LP LPMLI L NNN G N I I WYN YS FS K I LDGK D V L EM S I E N I IN E FDIN K INDN E MSKLEN I K I FNG YY NI Y ANTLETNS tl 158
Cdd:COG3887 81 L E LP IGIVL L DED G E I E WYN PY FS E I FGDE D L L GK S L E D I FP E LNLD K LKEE E GEEPFT I T I GDR YY RV Y YKKVKDEE -- 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 159 skeg QK L I LLY LS DVTE VNRQLEYINNSKE VI ML I EV DN L D D V IK S TE E DKKP LL IA E IE R AI N SY A QNLSAM LK K Y DYN 238
Cdd:COG3887 159 ---- ED L R LLY FF DVTE YEELKKEYEEERP VI GI I FI DN Y D E V TQ S MD E SERS LL NS E VT R KL N DW A NEYGGF LK R Y SSD 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 239 K Y ILCIENQYI EK EM E K KF E ILD VVKD I NI GN KLM VTLSIG V G RN G ENPL E D G KF A T SA KE LALGRGGDQVVVK S G ENLD 318
Cdd:COG3887 235 R Y LAVMNEKIL EK LE E D KF S ILD EIRE I TS GN NIP VTLSIG I G YG G DSLA E L G EL A Q SA LD LALGRGGDQVVVK D G DKVR 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 319 FYGGKT KEL EKRT K V K ARV VSYV L LD LIKES NK VFIMGH I NPD I D CL G S A L G LYS I INS L E KE C YI I L EDI N T SI RT LM D 398
Cdd:COG3887 315 FYGGKT NAV EKRT R V R ARV IAHA L RE LIKES DN VFIMGH K NPD M D SI G A A I G VLR I AKM L G KE A YI V L DEV N P SI DR LM E 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 399 K IKEE QV Y NSI FI NSNK A I E K I DE N S LL II VD V H SKGH VE NMKVV EK SK K L V I IDHHR KSTDY IE GAL L S Y T EPYASSTS 478
Cdd:COG3887 395 E IKEE EE Y EDL FI SPEE A L E L I TK N T LL VV VD T H RPSL VE SPELL EK AE K V V V IDHHR RGEEF IE NPV L V Y I EPYASSTS 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 479 ELVTEL I QY MVE K PA L RAI EA E ALLAGI C VDTKNF YFK TGVRTFEAAS F L K R L GADTI D VK K L LSD DL N T HLKKY E I I KT 558
Cdd:COG3887 475 ELVTEL L QY QPD K IK L SKL EA T ALLAGI V VDTKNF TLR TGVRTFEAAS Y L R R N GADTI L VK Q L FKE DL D T YIARA E L I SS 554
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 559 V E V - KNN IA V A IC P Q DI Q - DTLL AAQ V ADEL I NI I GI YT SFVL V K VEND - I Y IS G RSLG D INVQ L I L E S LGGGGH M T M AG 635
Cdd:COG3887 555 A E I y RDG IA I A VG P E DI E y SQVI AAQ A ADEL L NI K GI EA SFVL T K RSDG k I G IS A RSLG E INVQ V I M E K LGGGGH L T N AG 634
650 660
....*....|....*....|....*...
gi 499410968 636 A K LKD M TIEEA LKE L QNS ID K YL S EG D E 663
Cdd:COG3887 635 A Q LKD V TIEEA KEQ L KEA ID E YL E EG E E 662
PRK14538
PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
167-651
1.61e-78
putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Pssm-ID: 173004 [Multi-domain]
Cd Length: 838
Bit Score: 267.08
E-value: 1.61e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 167 LL YL SDV TE V - NRQLEYINNSKEVI M l I EV DNL DDVIKSTEEDKKPLLIA E IER A INSYAQNLSAM LK KYDYNKYI L C I E 245
Cdd:PRK14538 184 VF YL FNA TE K e QIKHLFLQKTLALA M - I TF DNL EESLIRYDLSEQSQIQG E YLS A LSDFIEPYEGY LK QLIDDRFL L L I N 262
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 246 N Q YIE K EM E K KF E ILD VVKD I NIGNK L M VTLS I G VGRNGENPLEDGKFATS A K ELA LG RGGDQ V VV K - SG E NLDFY G G K T 324
Cdd:PRK14538 263 R Q NLD K MI E N KF S ILD TIRN I SHKYQ L K VTLS M G IACWNLSYDKLATYSQN A I ELA QK RGGDQ A VV N i EN E KIKYF G A K I 342
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 325 KE L E K RT KV K ARV VSYV L L D LI K ESNKV FIMGH INP D I D C LGS ALGL Y S I INSLEKEC -- YIIL -- E DINT S IRTLMDK - 399
Cdd:PRK14538 343 AS L S K QS KV N ARV NAQN L V D IL K KNPHC FIMGH NHT D L D S LGS MIAF Y K I ALTIHPDN nn YIIL de E KLDK S LTPVYHQ l 422
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 400 IK E E QVYNSIF I NSNK A IEK I DE N S L LIIV D VHS K GH V ENMKVVEKSKKLVI IDHHR KSTDY I EG a LL SY TEPY ASST S E 479
Cdd:PRK14538 423 IK Q E HKVTLNI I TTQQ A SKM I KK N D L IAVL D TQT K DI V NSPELLSLTNNIIV IDHHR ATEEI I PS - IF SY VDSS ASST V E 501
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 480 L VT EL IQYMVEKPALR A I EA EALL AGI CV DT KN F YFK T GV RTFE A AS F LK R LGAD T I D VK KL L SD D LNTH L KKYEI I KTV 559
Cdd:PRK14538 502 L LV EL MGFLEKEIHIT A F EA SIMY AGI LI DT NA F IYR T SS RTFE V AS K LK D LGAD A I E VK SW L RK D FDKV L EINKL I SKM 581
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 560 E V - KNNI A VAICPQDIQDTLLA AQVA DELI NI IGIYTS F VLV K V - E N D I Y IS G RS LGD INVQ L I L E SLG GGGH MTM A GAK 637
Cdd:PRK14538 582 E I f MDRF A IIKSEEIYDNRSFL AQVA ESVL NI QNVDAA F MIA K I s D N T I A IS A RS YNE INVQ T I M E QME GGGH LNS A ATQ 661
490
....*....|....
gi 499410968 638 L K DMT I EEALKE L Q 651
Cdd:PRK14538 662 I K GTN I KTVTQT L K 675
DHH
pfam01368 DHH family; It is predicted that this family of proteins all perform a phosphoesterase ...
351-506
4.63e-30
DHH family; It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Pssm-ID: 460177 [Multi-domain]
Cd Length: 145
Bit Score: 115.36
E-value: 4.63e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 351 K VF I M GH I NPD I D CL GSALGLY SIINS L ekecyiiled INTSIRTLMD kike EQVYNSIF IN SNKAI E K ID ENS LLI I VD 430
Cdd:pfam01368 1 K IV I Y GH Y NPD G D GI GSALGLY RYLKE L ---------- VGPDVEYYIP ---- DRLEEGYG IN PEAIE E L ID FDT LLI T VD 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 431 VHS K GHVENMKVV E KSKKLVI IDHH R k ST D YI -- EG A LLSYT EP Y ASSTSE L V TE L I QY MVEKPALR -- AIE A EA LL A GI 506
Cdd:pfam01368 67 CGI K SVEGIELAK E LGIDVIV IDHH L - PN D FL pd AD A IINPR EP P ASSTSE V V FK L L QY AYGEEGKE id KEL A DL LL L GI 145
PAS
smart00091 PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising ...
75-127
1.23e-03
PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels.
Pssm-ID: 214512
Cd Length: 67
Bit Score: 37.76
E-value: 1.23e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 499410968 75 R NT L LN LP LPMLI L NNN G N I IWY N YSFSKI L D -- GKDVLEM S IENI I NEF D INKI 127
Cdd:smart00091 4 R AI L ES LP DGIFV L DLD G R I LYA N PAAEEL L G ys PEELIGK S LLEL I HPE D RERV 58
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
1-663
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 874.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 1 M GS K -- YK KL ITPTKGYIVISAV L IM I IMYQ N VL IG VFF L IIY ILLL IH NIK SNKI R KDQWKEF IE NF SY NL D S A TRNT L 78
Cdd:COG3887 1 M KK K lk KR KL RPLLLVLLLLLLL L LI I LLFY N WI IG LLG L LLL ILLL YY NIK AERK R RRELEKY IE TL SY RV D K A GKEA L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 79 L N LP LPMLI L NNN G N I I WYN YS FS K I LDGK D V L EM S I E N I IN E FDIN K INDN E MSKLEN I K I FNG YY NI Y ANTLETNS tl 158
Cdd:COG3887 81 L E LP IGIVL L DED G E I E WYN PY FS E I FGDE D L L GK S L E D I FP E LNLD K LKEE E GEEPFT I T I GDR YY RV Y YKKVKDEE -- 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 159 skeg QK L I LLY LS DVTE VNRQLEYINNSKE VI ML I EV DN L D D V IK S TE E DKKP LL IA E IE R AI N SY A QNLSAM LK K Y DYN 238
Cdd:COG3887 159 ---- ED L R LLY FF DVTE YEELKKEYEEERP VI GI I FI DN Y D E V TQ S MD E SERS LL NS E VT R KL N DW A NEYGGF LK R Y SSD 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 239 K Y ILCIENQYI EK EM E K KF E ILD VVKD I NI GN KLM VTLSIG V G RN G ENPL E D G KF A T SA KE LALGRGGDQVVVK S G ENLD 318
Cdd:COG3887 235 R Y LAVMNEKIL EK LE E D KF S ILD EIRE I TS GN NIP VTLSIG I G YG G DSLA E L G EL A Q SA LD LALGRGGDQVVVK D G DKVR 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 319 FYGGKT KEL EKRT K V K ARV VSYV L LD LIKES NK VFIMGH I NPD I D CL G S A L G LYS I INS L E KE C YI I L EDI N T SI RT LM D 398
Cdd:COG3887 315 FYGGKT NAV EKRT R V R ARV IAHA L RE LIKES DN VFIMGH K NPD M D SI G A A I G VLR I AKM L G KE A YI V L DEV N P SI DR LM E 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 399 K IKEE QV Y NSI FI NSNK A I E K I DE N S LL II VD V H SKGH VE NMKVV EK SK K L V I IDHHR KSTDY IE GAL L S Y T EPYASSTS 478
Cdd:COG3887 395 E IKEE EE Y EDL FI SPEE A L E L I TK N T LL VV VD T H RPSL VE SPELL EK AE K V V V IDHHR RGEEF IE NPV L V Y I EPYASSTS 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 479 ELVTEL I QY MVE K PA L RAI EA E ALLAGI C VDTKNF YFK TGVRTFEAAS F L K R L GADTI D VK K L LSD DL N T HLKKY E I I KT 558
Cdd:COG3887 475 ELVTEL L QY QPD K IK L SKL EA T ALLAGI V VDTKNF TLR TGVRTFEAAS Y L R R N GADTI L VK Q L FKE DL D T YIARA E L I SS 554
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 559 V E V - KNN IA V A IC P Q DI Q - DTLL AAQ V ADEL I NI I GI YT SFVL V K VEND - I Y IS G RSLG D INVQ L I L E S LGGGGH M T M AG 635
Cdd:COG3887 555 A E I y RDG IA I A VG P E DI E y SQVI AAQ A ADEL L NI K GI EA SFVL T K RSDG k I G IS A RSLG E INVQ V I M E K LGGGGH L T N AG 634
650 660
....*....|....*....|....*...
gi 499410968 636 A K LKD M TIEEA LKE L QNS ID K YL S EG D E 663
Cdd:COG3887 635 A Q LKD V TIEEA KEQ L KEA ID E YL E EG E E 662
PRK14538
PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
167-651
1.61e-78
putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Pssm-ID: 173004 [Multi-domain]
Cd Length: 838
Bit Score: 267.08
E-value: 1.61e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 167 LL YL SDV TE V - NRQLEYINNSKEVI M l I EV DNL DDVIKSTEEDKKPLLIA E IER A INSYAQNLSAM LK KYDYNKYI L C I E 245
Cdd:PRK14538 184 VF YL FNA TE K e QIKHLFLQKTLALA M - I TF DNL EESLIRYDLSEQSQIQG E YLS A LSDFIEPYEGY LK QLIDDRFL L L I N 262
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 246 N Q YIE K EM E K KF E ILD VVKD I NIGNK L M VTLS I G VGRNGENPLEDGKFATS A K ELA LG RGGDQ V VV K - SG E NLDFY G G K T 324
Cdd:PRK14538 263 R Q NLD K MI E N KF S ILD TIRN I SHKYQ L K VTLS M G IACWNLSYDKLATYSQN A I ELA QK RGGDQ A VV N i EN E KIKYF G A K I 342
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 325 KE L E K RT KV K ARV VSYV L L D LI K ESNKV FIMGH INP D I D C LGS ALGL Y S I INSLEKEC -- YIIL -- E DINT S IRTLMDK - 399
Cdd:PRK14538 343 AS L S K QS KV N ARV NAQN L V D IL K KNPHC FIMGH NHT D L D S LGS MIAF Y K I ALTIHPDN nn YIIL de E KLDK S LTPVYHQ l 422
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 400 IK E E QVYNSIF I NSNK A IEK I DE N S L LIIV D VHS K GH V ENMKVVEKSKKLVI IDHHR KSTDY I EG a LL SY TEPY ASST S E 479
Cdd:PRK14538 423 IK Q E HKVTLNI I TTQQ A SKM I KK N D L IAVL D TQT K DI V NSPELLSLTNNIIV IDHHR ATEEI I PS - IF SY VDSS ASST V E 501
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 480 L VT EL IQYMVEKPALR A I EA EALL AGI CV DT KN F YFK T GV RTFE A AS F LK R LGAD T I D VK KL L SD D LNTH L KKYEI I KTV 559
Cdd:PRK14538 502 L LV EL MGFLEKEIHIT A F EA SIMY AGI LI DT NA F IYR T SS RTFE V AS K LK D LGAD A I E VK SW L RK D FDKV L EINKL I SKM 581
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 560 E V - KNNI A VAICPQDIQDTLLA AQVA DELI NI IGIYTS F VLV K V - E N D I Y IS G RS LGD INVQ L I L E SLG GGGH MTM A GAK 637
Cdd:PRK14538 582 E I f MDRF A IIKSEEIYDNRSFL AQVA ESVL NI QNVDAA F MIA K I s D N T I A IS A RS YNE INVQ T I M E QME GGGH LNS A ATQ 661
490
....*....|....
gi 499410968 638 L K DMT I EEALKE L Q 651
Cdd:PRK14538 662 I K GTN I KTVTQT L K 675
NrnA
COG0618 nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and ...
342-654
7.60e-65
nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440383 [Multi-domain]
Cd Length: 312
Bit Score: 216.59
E-value: 7.60e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 342 L LD L I K ESNKVF I MG H I NPD I D C LGSAL G L YSIINS L E KE CY I ILEDINTSIRTLMDKIK E eqvynsi FINSNKAIEKI D 421
Cdd:COG0618 3 L AE L L K KADRIL I LT H V NPD G D A LGSAL A L ALLLRA L G KE VT I VYPGEIPHELAFLPGAD E ------- IVRLEDVDLEY D 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 422 ens L L I I VD VH S KGHVENMK - VV EK S K KLVI IDHH RKST D Y ieg ALLSYTE P Y A SS TSE LVT EL IQYM ve KPALRAIE A E 500
Cdd:COG0618 76 --- L V I V VD TS S PDRIGDLA e LL EK A K PVIV IDHH PSND D F --- GDFNDVD P D A GA TSE IIY EL LKEL -- GIEIDPEI A T 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 501 AL LA GI CV DT KN F YFK - T GV R T F E AA SF L KRL GAD TIDVKKL L SDD L NTHLK K Y -- EIIKTV EV -- KNNI A VAICPQDIQ 575
Cdd:COG0618 148 AL YT GI VT DT GS F RYS n T TP R D F R AA AE L LEK GAD LDLIARI L YPS L SLEQL K L lg RALENL EV le DGKV A YSYLTKEDL 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 576 DTLL A ----- AQVA D E L IN I I G IYTSF V LVK VE ND - I YI S G RS L G DIN V QL I LESL GGGGH MTM AGA KLKDMTI EE ALKE 649
Cdd:COG0618 228 EEFG A tpddt EGLV D Y L LS I E G VEVAV V FGE VE DG e I KV S L RS K G RVD V GE I AREF GGGGH ARA AGA TIPGLDL EE VVEK 307
....*
gi 499410968 650 L QNSI 654
Cdd:COG0618 308 L LEAL 312
DHH
pfam01368 DHH family; It is predicted that this family of proteins all perform a phosphoesterase ...
351-506
4.63e-30
DHH family; It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Pssm-ID: 460177 [Multi-domain]
Cd Length: 145
Bit Score: 115.36
E-value: 4.63e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 351 K VF I M GH I NPD I D CL GSALGLY SIINS L ekecyiiled INTSIRTLMD kike EQVYNSIF IN SNKAI E K ID ENS LLI I VD 430
Cdd:pfam01368 1 K IV I Y GH Y NPD G D GI GSALGLY RYLKE L ---------- VGPDVEYYIP ---- DRLEEGYG IN PEAIE E L ID FDT LLI T VD 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 431 VHS K GHVENMKVV E KSKKLVI IDHH R k ST D YI -- EG A LLSYT EP Y ASSTSE L V TE L I QY MVEKPALR -- AIE A EA LL A GI 506
Cdd:pfam01368 67 CGI K SVEGIELAK E LGIDVIV IDHH L - PN D FL pd AD A IINPR EP P ASSTSE V V FK L L QY AYGEEGKE id KEL A DL LL L GI 145
DHHA1
pfam02272 DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called ...
528-654
2.60e-07
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members. This domains is also found in alanyl tRNA synthetase, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Pssm-ID: 396724 [Multi-domain]
Cd Length: 139
Bit Score: 50.13
E-value: 2.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 528 L KR L GADTIDVK K L L SD -- DLNTH LK KY E IIKTV E VK N NIA V AICPQDIQ - D TLLAAQV AD E L INII G - IYTSF V LVKVE 603
Cdd:pfam02272 1 L ES L NEELKELE K E L EE lk EALAL LK AK E LLEKA E EI N GVK V LVAEVGEG w D AGALGIA AD R L KKKL G d PVIVL V AKEDG 80
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 499410968 604 NDIYI S G RS LG D -- INVQLI L ESL ------ GGGGH MTM AGA KLKDMTIE EAL KE L QNS I 654
Cdd:pfam02272 81 DKVKV S A RS SK D kg VDAGEL L KEV aailgg GGGGH DLA AGA GIDAEKLD EAL EL L EEA I 139
DhhP
COG2404 Oligoribonuclease NrnA/c-di-AMP phosphodiesterase DhhP, DHH superfamily [Translation, ...
350-657
1.17e-06
Oligoribonuclease NrnA/c-di-AMP phosphodiesterase DhhP, DHH superfamily [Translation, ribosomal structure and biogenesis, Signal transduction mechanisms];
Pssm-ID: 441960 [Multi-domain]
Cd Length: 307
Bit Score: 50.72
E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 350 N K VF I MG H in P D I D CL G S A L g L YSIINSLEKEC Y iiledi NT S IRT L MDKIKE eqvynsifinsnk AI E KIDENS L LI I V 429
Cdd:COG2404 3 P K IL I IT H -- T D L D GV G C A A - L ARRAFGDPVKL Y ------ FA S PGK L DEILER ------------- IL E YLKKGE L VF I T 60
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 430 D ------ VHSKGHVENMKVV EK SK K L V I IDHH r K STDYIEG AL LSYTEPYASS TS ELVTE L I - Q Y MVE kpa LRAIEA E A L 502
Cdd:COG2404 61 D lspnke TLEEIEELLEELK EK GA K V V W IDHH - K WAEELAN AL REAGVWLVVD TS TCAAG L V y E Y LHP --- EGDEFL E E L 136
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 503 LAGIC - V D TKNF ------ YFKTGVRTFEAASFLK RL GADTI ------- D V KKL L SDDL N TH L KKY E - II K T V EVK -- N NI 565
Cdd:COG2404 137 VEVVR d R D LWLW edpesk DLNRLLFWLGDEEYKE RL LEKLA ngplldd E V EEA L LEYR N EE L ERI E k AL K R V VIR ei N GY 216
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 566 A V AICPQDIQDT llaaqvadeli NII G iyt SFV L VKVEN D IY -------- I S G RS L G DIN V QL I LES LGGGGH MTM AGAK 637
Cdd:COG2404 217 K V GVVYAPRGSQ ----------- SEL G --- NLL L ERNGA D FA vivnpkgk V S L RS R G FVD V SE I AKK LGGGGH PNA AGAK 282
330 340
....*....|....*....|
gi 499410968 638 L KDMTI E EA L KELQNS I DKY 657
Cdd:COG2404 283 L DIELL E LI L SAILRA I EEK 302
PPX1
COG1227 Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion];
350-513
9.56e-06
Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion];
Pssm-ID: 440840 [Multi-domain]
Cd Length: 307
Bit Score: 47.85
E-value: 9.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 350 N K VFIM GH I NPD I D CLG SA LGLYSII N S L EKECY - II L EDI N TSIRTLM D KIK eeqvynsif INSNKA IE KIDENSLL I I 428
Cdd:COG1227 2 M K ILVF GH K NPD T D SIC SA IAYAYLK N Q L GEDAE a VR L GEP N PETAFVL D YFG --------- VEAPEL IE DVAAGKKV I L 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499410968 429 VD v H ----- S KGHVENMKVV E kskklv IIDHHR KS t D YIEG A L L SYT - EP YA s S T SELVTE L I - QYM VE K P al RA I e A EA 501
Cdd:COG1227 73 VD - H nelaq S VDGIDEAEIL E ------ IIDHHR IG - D FETA A P L YIR i EP VG - C T ATIIAK L Y k ENG VE I P -- KE I - A GL 140
170
....*....|..
gi 499410968 502 L L AG I CV DT KN F 513
Cdd:COG1227 141 M L SA I LS DT LL F 152
PAS
smart00091 PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising ...
75-127
1.23e-03
PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels.
Pssm-ID: 214512
Cd Length: 67
Bit Score: 37.76
E-value: 1.23e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 499410968 75 R NT L LN LP LPMLI L NNN G N I IWY N YSFSKI L D -- GKDVLEM S IENI I NEF D INKI 127
Cdd:smart00091 4 R AI L ES LP DGIFV L DLD G R I LYA N PAAEEL L G ys PEELIGK S LLEL I HPE D RERV 58
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
