|
Name |
Accession |
Description |
Interval |
E-value |
| AlaS |
COG0013 |
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA ... |
1-887 |
0e+00 |
|
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439784 [Multi-domain] Cd Length: 880 Bit Score: 1490.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 1 MNSVNSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAGGKHNDLDNV 80
Cdd:COG0013 1 MMTSAEIRQKFLDFFESKGHTIVPSSSLVPKNDPTLLFTNAGMVQFKPYFLGQEKPPYPRATTSQKCVRTGGKHNDLENV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 81 GYTARHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKISGLPDEKIVRIATADNF 160
Cdd:COG0013 81 GYTARHHTFFEMLGNFSFGDYFKEEAIAWAWELLTEVLGLPKERLWVTVYEDDDEAYDIWKKEIGVPEERIIRLGKKDNF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 161 WAMGDTGPCGPCSEIFYDHGDEIWGGPPGSAYEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQG 240
Cdd:COG0013 161 WEMGDTGPCGPCSEIFYDRGPEYGGGPPGSPGEDGDRYIEIWNLVFMQFNRDEDGTLTPLPKKNIDTGMGLERIAAVLQG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 241 GHDNYDIDLFRALIAVSQEITGVK--ATGDFIASHRVIADHLRSSAFLIADGVLPSNEGRGYVLRRIMRRAMRHAHLLGA 318
Cdd:COG0013 241 VHSNYETDLFRPLIEAAAELTGVKygADEEDDVSLRVIADHIRAVAFLIADGVLPSNEGRGYVLRRILRRAVRHGRLLGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 319 KEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDLKE--GDHLNGEIAFKLYDTYG 396
Cdd:COG0013 321 KEPFLYKLVPVVVEEMGDAYPELKEKQELIEKVLKAEEERFLRTLERGLKLLDEAIAKLKAagGKVLSGEDAFKLYDTYG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 397 FPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSGSGETVTEAIWFSVRDQLGATEFLGYETEKSEGILTALVRDG 476
Cdd:COG0013 401 FPLDLTEEIARERGLTVDEEGFEAAMEEQRERARAAAKFSGDAAVDGVWRELLEEGGPTEFVGYDTLEAEAKVLALVKDG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 477 EIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKKADGVFIHIGEVKSGQARMSECVELTVDGVR 556
Cdd:COG0013 481 ELVDSAKAGEEVEVVLDRTPFYAESGGQVGDTGTIEGDGGVFEVTDTQKPPGGLIVHIGKVEEGELKVGDTVTAQVDAER 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 557 RKKIRVNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDA 636
Cdd:COG0013 561 RRAIARNHSATHLLHAALREVLGEHVTQAGSLVAPDRLRFDFSHFEALTPEELAEIEDLVNEKIRENLPVETREMPLDEA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 637 ISEGAMALFGEKYGDEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIEALTGTAARLY 716
Cdd:COG0013 641 KALGAMALFGEKYGDEVRVVSIGD----------FSRELCGGTHVSRTGDIGLFKIVSESSVAAGVRRIEAVTGEAALEY 710
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 717 LSRQDARVHEIADLLKTSATDVEERVRILLEDRRKLEKELNDERKKSVLSGGivKSDQEDITIINGISFMGRVVKNISPR 796
Cdd:COG0013 711 LREQEALLKELAELLKAPPEELPERVEALLEELKELEKELEQLKAKLASAAA--DDLLAQAEEIGGVKVLAARVEGVDAK 788
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 797 DLKTLVDSGKKKIGSGVVAFIGVSeDGKGSAVLGVTDDLTHK-LNAVDLVRILSgilggqggGG-------RPDMAQSGG 868
Cdd:COG0013 789 DLRDLADDLKDKLGSGVVVLASVA-DGKVSLVAGVTKDLVKKgLKAGDLVKEVA--------KIvggggggRPDMAQAGG 859
|
890
....*....|....*....
gi 499494246 869 PKGNKADEALAVLKASLEG 887
Cdd:COG0013 860 KDPSKLDEALAAVKEWLAE 878
|
|
| alaS |
TIGR00344 |
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the ... |
7-868 |
0e+00 |
|
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the reaction (tRNAala + L-alanine + ATP = L-alanyl-tRNAala + pyrophosphate + AMP). [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273026 [Multi-domain] Cd Length: 845 Bit Score: 937.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 7 IRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAggkhNDLDNVGYTARH 86
Cdd:TIGR00344 2 IRQTFLDFFKEKGHQVIPSAPLVPRNDPTLLLTNAGMAQFKPIFTGIVKPPSNRLTNAQPCIRL----NDLENVGRTARH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 87 HTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKIsGLPDEKIVRIATADNFWAMGDt 166
Cdd:TIGR00344 78 HTLFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLDKERLYVTVYEDDEEAYKIWEKI-GIPADRIIKCDAKDNFWDMGD- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 167 GPCGPCSEIFYDHgdeiWGGPPGSAYEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQGGHDNYD 246
Cdd:TIGR00344 156 GPCGPCTEIYYDF----VGGKPGEPLEENDRYLEVWNLVFMQFNRDPDGNYTPLPKKNIDTGMGLERFVAVLQGVPTNYD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 247 IDLFRALIAVSQEITGVK-----------ATGDFIASHRVIADHLRSSAFLIADGVLPSNEGRGYVLRRIMRRAMRHAHL 315
Cdd:TIGR00344 232 TDIFLPLIEKIEEITGVKydsnnagimdeKRVEDLRSLRVIADHTRAIAFMLADGVVPSNEGRGYVLRRLIRRALRHGKK 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 316 LGAKEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDlKEGDHLNGEIAFKLYDTY 395
Cdd:TIGR00344 312 LGLKEAFLYKLVPTLIEVLGDYYPELKEKQEFVEQILELEEERFAKTLERGLRLFEKLLKK-TGKKELDGEDAFKLYDTY 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 396 GFPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSgsgetvTEAIWFSVRDQLGATEFLGYETEKSEGILTALVRD 475
Cdd:TIGR00344 391 GFPVELTKEIAEERGLTVDMPGFEALMAEQRERSKQNSQ------FQEQEIALVNVYPATEFLGYDDLEFEAKVIGLFDD 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 476 GEIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKkADGVFIHIGEVKSGQARMSECVELTVDGV 555
Cdd:TIGR00344 465 GYLVEQALAGQSVYVILDQTPFYAESGGQIGDTGYLIANDGKFRVVDVQK-PNGVVFHFGEVEGGSLKVGDKVIAVIDEK 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 556 RRKKIRVNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDD 635
Cdd:TIGR00344 544 RRFRIMRNHSATHLLHAALQKVLGNHVWQAGSLVSFKKLRFDFSHFRALTREELEEIEDLANEQILANIPIKVIFMDLDE 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 636 AISEGAMALFGEKY--GDEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIEALTGTAA 713
Cdd:TIGR00344 624 AKRKGAFALFGEKYvpGEKVRVVSVGD----------FSVELCGGTHVRNTGEIGLFKIVKESGIAAGVRRIEAVTGEAA 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 714 RLYLSRQDARVHEIADLLKTSATDVEERVRILLEDRRKLEKELND-ERKKSVLSGGIVKSDQEDitiINGISFMGRVVKN 792
Cdd:TIGR00344 694 IEYLNEQEDKLKELADILKVTPNELPKKVERFFEEWKALQKELESlKLKIADQKIDELKDKAET---INGVKVLVEVVDA 770
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499494246 793 ISPRDLKTLVDSGKKKIGSGVVAFIGVsEDGKGSAVLGVTDDL-THKLNAVDLVRILSgILGGQGGGGRPDMAQSGG 868
Cdd:TIGR00344 771 KDMKSLKTMADRLKSKLGSAIYVLASF-AEGKVKLVCGVSNDVlTKKIKAGELINQIA-QVLGGKGGGRPDFAQGGG 845
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
3-883 |
0e+00 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 864.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 3 SVNSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTG-----LEQRPYKQATTAQKCVRAGGKHNDL 77
Cdd:PLN02900 12 PGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGtadpnTPLRKLPRATNTQKCIRAGGKHNDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 78 DNVGYTARHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVST------ELWRKIsgLPDEKI 151
Cdd:PLN02900 92 DDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEKQApddearAIWLDY--LPEERV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 152 VRIATADNFWAMGDTGPCGPCSEIFYD-HGDEiwgGPPGSAYEDGDRFIEIWNLVFMQYeqvNKE--KRVE-LPHPSIDT 227
Cdd:PLN02900 170 LPFGCKDNFWEMGDTGPCGPCSEIHYDrIGER---DAADLVNNDDPRFIEIWNLVFIQF---NREadGSLKpLPAKHVDT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 228 GMGLERIAAVLQGGHDNYDIDLFRALIAVSQEITGV--------KATGDFI-ASHRVIADHLRSSAFLIADGVLPSNEGR 298
Cdd:PLN02900 244 GMGLERLASILQNKPSNYDTDLFMPIFDAIQEATGArpyagkvgAEDDDRVdMAYRVVADHIRTLSFAIADGVVPSNEGR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 299 GYVLRRIMRRAMRHAHL-LGAKEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDL 377
Cdd:PLN02900 324 GYVLRRLLRRAVRYGRLlLGAEEGFFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFKKALAAA 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 378 KE--GDHLNGEIAFKLYDTYGFPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSGSGETVTEAI-----WFSVRD 450
Cdd:PLN02900 404 KAngGPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHLKAGGGAIELAaeatsWLQKQG 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 451 QLGATEFLGYET-EKSEGILTALVRDGEIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKN-FVFEVHDTQKKAd 528
Cdd:PLN02900 484 VAATDDFLKYDWlSDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLEGSGgAVVEVSDVQKAG- 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 529 GVFIHIGEVKSGQARMSECVELTVDGVRRKKIRVNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEE 608
Cdd:PLN02900 563 GFVLHIGTVTEGSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKPMTPEE 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 609 LEKIEDLANEIVLQNSEVTTRLMLVDDA--ISeGAMALFGEKYGDEVRVVSMGnrlekGKLksrwSIELCGGTHVERTGD 686
Cdd:PLN02900 643 LREVESLVNEWIGDALPVEAKEMPLADAkrIN-GLRAVFGEKYPDPVRVVSVG-----GVY----SMELCGGTHVSNTAE 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 687 IGLIHIVSESSVAAGVRRIEALTGTAARLYLSRQDARVHEIADLLKTSATDVE------------------------ERV 742
Cdd:PLN02900 713 AEAFKLLSEEGIAKGIRRITAVTGGAAVEAINAADSLERELDSALKVEGSDLEkkvaslksrvdaavipaakkeeirARV 792
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 743 RILLEDRRKLEKELNDERKKSVLSGGIVKSDQediTIINGISFM-GRVVKNISPRDLKTLVDSGKKKIGSGVVAFIGVSE 821
Cdd:PLN02900 793 SALQKELRAAQKEAAALRAKLAVAKATELASK---ALSAGKSVLvARLDVGVDAAALKEAAEKVIAKLGDPAAVVLSSDE 869
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499494246 822 -DGKGSAVLGVTDDLTHK-LNAVDLVRILsGILGGQGGGGRPDMAQSGGPKGNKADEALAVLKA 883
Cdd:PLN02900 870 eKGKVSLVAAVPPGVVKKgLKAGKWLGAI-AKLCGGGGGGKPGFAQGQGRDAEKLDAALEKARA 932
|
|
| tRNA-synt_2c |
pfam01411 |
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be ... |
7-556 |
0e+00 |
|
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Pssm-ID: 279719 [Multi-domain] Cd Length: 548 Bit Score: 747.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 7 IRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLE-QRPYKQATTAQKCVRAGgkhnDLDNVGYTAR 85
Cdd:pfam01411 2 IRQTFLDFFEKKGHTRVPSSPVVPRNDPTLLFTNAGMNQFKPIFLGGVaKPPYNRATNSQKCIRAG----DLENVGRTGR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 86 HHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKISGLPDEKIVRIATADNFWAMGD 165
Cdd:pfam01411 78 HHTFFEMLGNFSFGDYFKEEAIEYAWELLTKELGLPPERLYVTVFEWDDEAGPIWEKIVGGPEERILRFGDKDNFWEMGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 166 TGPCGPCSEIFYDHGDEIWGGPPGSA-YEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQGGHDN 244
Cdd:pfam01411 158 TGPCGPCSEIDYDRGEEIGGWDSGGTpTADDDRFLEIWNLVFMQFNRENDGTLKPLPKKSIDTGMGLERLVAVLQDVRSN 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 245 YDIDLFRALIAVSQEITGVKATGDFIA--SHRVIADHLRSSAFLIADGVLPSNEGRGYVLRRIMRRAMRHAHLLGAKEPL 322
Cdd:pfam01411 238 YDTDVFIPVIELIEEISGARYYTVDETdeAYRVIADHTRALTFALADGVVPSNEGRGYVLRRILRRAVRHAKKLGLKEPF 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 323 MWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDLKEG-DHLNGEIAFKLYDTYGFPLDL 401
Cdd:pfam01411 318 LYDLVPTVVEVLGDAYPELKEDEDFIQEILELEEERFAKTLERGLRLLERLIAKLKKGkKTLPGEDAFKLYDTYGFPVDL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 402 TQDALRCRGISVDVAAFNKAMEGQKAKARANWSGSGEtvtEAIWFSVRDQLGATEFLGYETEKSEGILTALVRDGEIVDD 481
Cdd:pfam01411 398 TKEIAEERGLKVDMPGFEYAMVEQRERSKQAVKEKGE---KLDVSALKELPATTEFLGYDDLESEAKILALPKDGEFVAE 474
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499494246 482 ISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQkKADGVFIHIGEVKSGQARMSECVELTVDGVR 556
Cdd:pfam01411 475 VLAGQEGGVILDRTPFYAESGGQIGDTGYIIGDGGEFRVTDVQ-KYGGVVVHKGKLESGKLKVGDKVIAVIDEDR 548
|
|
| AlaRS_core |
cd00673 |
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is ... |
4-240 |
9.86e-129 |
|
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.
Pssm-ID: 238360 [Multi-domain] Cd Length: 232 Bit Score: 385.95 E-value: 9.86e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 4 VNSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAGGKHNdldnVGYT 83
Cdd:cd00673 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVNSQKCIRAGDIDN----VGKT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 84 ARHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKISGLPDEKIVRIATADNFWAM 163
Cdd:cd00673 77 GRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKDRLYVSVFEGDDEEEAIWWWKIGLPGIRIERIGFKDNFWEM 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499494246 164 GDTGPCGPCSEIFYDHGDEIWGGPpgSAYEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQG 240
Cdd:cd00673 157 GGNGPCGPCSEIFYDRGEERDAAS--LPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVWVLQG 231
|
|
| a_tRNA_ed_AlaXM |
NF040865 |
alanyl-tRNA editing protein AlaXM; |
490-706 |
9.06e-25 |
|
alanyl-tRNA editing protein AlaXM;
Pssm-ID: 468802 [Multi-domain] Cd Length: 234 Bit Score: 103.85 E-value: 9.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 490 LVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKKADGVfIHIGEvKSGQARMSECVELTVDGVRRKKIRVNHSATHL 569
Cdd:NF040865 26 VVLDRTAFYPTGGGQPHDTGTLVRDDKEFRVVDVRKEGGEI-AHVVD-RAPGLKPGDKVKGEIDWDRRYRLMRYHTASHI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 570 LHEALRQVLGSHVTqkGSLVSPDRLRFDFSHPkSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDAISEGAMALFGEKY 649
Cdd:NF040865 104 LSAVLYREYGALIT--GGQISPDKARVDFSLE-NFDRELLEEIIEEANEIIAEGIEVKIYWLPREEALKIPGLVRLAKRL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 650 G---DEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIE 706
Cdd:NF040865 181 PpeiEEVRIVEIEG----------VDIQADGGTHVKNTGEIGEIKILKRENKGKGNKRLY 230
|
|
| tRNA_SAD |
smart00863 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of ... |
653-705 |
2.27e-16 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 197931 [Multi-domain] Cd Length: 43 Bit Score: 73.19 E-value: 2.27e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 499494246 653 VRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRI 705
Cdd:smart00863 1 VRVVSIGD----------FSVELCGGTHVPNTGEIGAFKILSVSGAYWGLQRI 43
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| AlaS |
COG0013 |
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA ... |
1-887 |
0e+00 |
|
Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Alanyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439784 [Multi-domain] Cd Length: 880 Bit Score: 1490.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 1 MNSVNSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAGGKHNDLDNV 80
Cdd:COG0013 1 MMTSAEIRQKFLDFFESKGHTIVPSSSLVPKNDPTLLFTNAGMVQFKPYFLGQEKPPYPRATTSQKCVRTGGKHNDLENV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 81 GYTARHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKISGLPDEKIVRIATADNF 160
Cdd:COG0013 81 GYTARHHTFFEMLGNFSFGDYFKEEAIAWAWELLTEVLGLPKERLWVTVYEDDDEAYDIWKKEIGVPEERIIRLGKKDNF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 161 WAMGDTGPCGPCSEIFYDHGDEIWGGPPGSAYEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQG 240
Cdd:COG0013 161 WEMGDTGPCGPCSEIFYDRGPEYGGGPPGSPGEDGDRYIEIWNLVFMQFNRDEDGTLTPLPKKNIDTGMGLERIAAVLQG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 241 GHDNYDIDLFRALIAVSQEITGVK--ATGDFIASHRVIADHLRSSAFLIADGVLPSNEGRGYVLRRIMRRAMRHAHLLGA 318
Cdd:COG0013 241 VHSNYETDLFRPLIEAAAELTGVKygADEEDDVSLRVIADHIRAVAFLIADGVLPSNEGRGYVLRRILRRAVRHGRLLGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 319 KEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDLKE--GDHLNGEIAFKLYDTYG 396
Cdd:COG0013 321 KEPFLYKLVPVVVEEMGDAYPELKEKQELIEKVLKAEEERFLRTLERGLKLLDEAIAKLKAagGKVLSGEDAFKLYDTYG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 397 FPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSGSGETVTEAIWFSVRDQLGATEFLGYETEKSEGILTALVRDG 476
Cdd:COG0013 401 FPLDLTEEIARERGLTVDEEGFEAAMEEQRERARAAAKFSGDAAVDGVWRELLEEGGPTEFVGYDTLEAEAKVLALVKDG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 477 EIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKKADGVFIHIGEVKSGQARMSECVELTVDGVR 556
Cdd:COG0013 481 ELVDSAKAGEEVEVVLDRTPFYAESGGQVGDTGTIEGDGGVFEVTDTQKPPGGLIVHIGKVEEGELKVGDTVTAQVDAER 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 557 RKKIRVNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDA 636
Cdd:COG0013 561 RRAIARNHSATHLLHAALREVLGEHVTQAGSLVAPDRLRFDFSHFEALTPEELAEIEDLVNEKIRENLPVETREMPLDEA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 637 ISEGAMALFGEKYGDEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIEALTGTAARLY 716
Cdd:COG0013 641 KALGAMALFGEKYGDEVRVVSIGD----------FSRELCGGTHVSRTGDIGLFKIVSESSVAAGVRRIEAVTGEAALEY 710
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 717 LSRQDARVHEIADLLKTSATDVEERVRILLEDRRKLEKELNDERKKSVLSGGivKSDQEDITIINGISFMGRVVKNISPR 796
Cdd:COG0013 711 LREQEALLKELAELLKAPPEELPERVEALLEELKELEKELEQLKAKLASAAA--DDLLAQAEEIGGVKVLAARVEGVDAK 788
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 797 DLKTLVDSGKKKIGSGVVAFIGVSeDGKGSAVLGVTDDLTHK-LNAVDLVRILSgilggqggGG-------RPDMAQSGG 868
Cdd:COG0013 789 DLRDLADDLKDKLGSGVVVLASVA-DGKVSLVAGVTKDLVKKgLKAGDLVKEVA--------KIvggggggRPDMAQAGG 859
|
890
....*....|....*....
gi 499494246 869 PKGNKADEALAVLKASLEG 887
Cdd:COG0013 860 KDPSKLDEALAAVKEWLAE 878
|
|
| alaS |
TIGR00344 |
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the ... |
7-868 |
0e+00 |
|
alanine--tRNA ligase; The model describes alanine--tRNA ligase. This enzyme catalyzes the reaction (tRNAala + L-alanine + ATP = L-alanyl-tRNAala + pyrophosphate + AMP). [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273026 [Multi-domain] Cd Length: 845 Bit Score: 937.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 7 IRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAggkhNDLDNVGYTARH 86
Cdd:TIGR00344 2 IRQTFLDFFKEKGHQVIPSAPLVPRNDPTLLLTNAGMAQFKPIFTGIVKPPSNRLTNAQPCIRL----NDLENVGRTARH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 87 HTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKIsGLPDEKIVRIATADNFWAMGDt 166
Cdd:TIGR00344 78 HTLFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLDKERLYVTVYEDDEEAYKIWEKI-GIPADRIIKCDAKDNFWDMGD- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 167 GPCGPCSEIFYDHgdeiWGGPPGSAYEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQGGHDNYD 246
Cdd:TIGR00344 156 GPCGPCTEIYYDF----VGGKPGEPLEENDRYLEVWNLVFMQFNRDPDGNYTPLPKKNIDTGMGLERFVAVLQGVPTNYD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 247 IDLFRALIAVSQEITGVK-----------ATGDFIASHRVIADHLRSSAFLIADGVLPSNEGRGYVLRRIMRRAMRHAHL 315
Cdd:TIGR00344 232 TDIFLPLIEKIEEITGVKydsnnagimdeKRVEDLRSLRVIADHTRAIAFMLADGVVPSNEGRGYVLRRLIRRALRHGKK 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 316 LGAKEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDlKEGDHLNGEIAFKLYDTY 395
Cdd:TIGR00344 312 LGLKEAFLYKLVPTLIEVLGDYYPELKEKQEFVEQILELEEERFAKTLERGLRLFEKLLKK-TGKKELDGEDAFKLYDTY 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 396 GFPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSgsgetvTEAIWFSVRDQLGATEFLGYETEKSEGILTALVRD 475
Cdd:TIGR00344 391 GFPVELTKEIAEERGLTVDMPGFEALMAEQRERSKQNSQ------FQEQEIALVNVYPATEFLGYDDLEFEAKVIGLFDD 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 476 GEIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKkADGVFIHIGEVKSGQARMSECVELTVDGV 555
Cdd:TIGR00344 465 GYLVEQALAGQSVYVILDQTPFYAESGGQIGDTGYLIANDGKFRVVDVQK-PNGVVFHFGEVEGGSLKVGDKVIAVIDEK 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 556 RRKKIRVNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDD 635
Cdd:TIGR00344 544 RRFRIMRNHSATHLLHAALQKVLGNHVWQAGSLVSFKKLRFDFSHFRALTREELEEIEDLANEQILANIPIKVIFMDLDE 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 636 AISEGAMALFGEKY--GDEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIEALTGTAA 713
Cdd:TIGR00344 624 AKRKGAFALFGEKYvpGEKVRVVSVGD----------FSVELCGGTHVRNTGEIGLFKIVKESGIAAGVRRIEAVTGEAA 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 714 RLYLSRQDARVHEIADLLKTSATDVEERVRILLEDRRKLEKELND-ERKKSVLSGGIVKSDQEDitiINGISFMGRVVKN 792
Cdd:TIGR00344 694 IEYLNEQEDKLKELADILKVTPNELPKKVERFFEEWKALQKELESlKLKIADQKIDELKDKAET---INGVKVLVEVVDA 770
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499494246 793 ISPRDLKTLVDSGKKKIGSGVVAFIGVsEDGKGSAVLGVTDDL-THKLNAVDLVRILSgILGGQGGGGRPDMAQSGG 868
Cdd:TIGR00344 771 KDMKSLKTMADRLKSKLGSAIYVLASF-AEGKVKLVCGVSNDVlTKKIKAGELINQIA-QVLGGKGGGRPDFAQGGG 845
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
3-883 |
0e+00 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 864.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 3 SVNSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTG-----LEQRPYKQATTAQKCVRAGGKHNDL 77
Cdd:PLN02900 12 PGDRIRRTFLSFFESKGHTFLPSSPLVPVDDPTLLFTNAGMNQFKPIFLGtadpnTPLRKLPRATNTQKCIRAGGKHNDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 78 DNVGYTARHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVST------ELWRKIsgLPDEKI 151
Cdd:PLN02900 92 DDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKVYGLPADRLYATYFGGDEKQApddearAIWLDY--LPEERV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 152 VRIATADNFWAMGDTGPCGPCSEIFYD-HGDEiwgGPPGSAYEDGDRFIEIWNLVFMQYeqvNKE--KRVE-LPHPSIDT 227
Cdd:PLN02900 170 LPFGCKDNFWEMGDTGPCGPCSEIHYDrIGER---DAADLVNNDDPRFIEIWNLVFIQF---NREadGSLKpLPAKHVDT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 228 GMGLERIAAVLQGGHDNYDIDLFRALIAVSQEITGV--------KATGDFI-ASHRVIADHLRSSAFLIADGVLPSNEGR 298
Cdd:PLN02900 244 GMGLERLASILQNKPSNYDTDLFMPIFDAIQEATGArpyagkvgAEDDDRVdMAYRVVADHIRTLSFAIADGVVPSNEGR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 299 GYVLRRIMRRAMRHAHL-LGAKEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDL 377
Cdd:PLN02900 324 GYVLRRLLRRAVRYGRLlLGAEEGFFPALVEVVVELSGDVFPEVKKNEKRITEIIAEEELSFGKTLEKGIEKFKKALAAA 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 378 KE--GDHLNGEIAFKLYDTYGFPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSGSGETVTEAI-----WFSVRD 450
Cdd:PLN02900 404 KAngGPVLSGKDAFLLYDTYGFPVDLTELMAEERGVTVDMEGFEAAMEEARERSRAAHLKAGGGAIELAaeatsWLQKQG 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 451 QLGATEFLGYET-EKSEGILTALVRDGEIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKN-FVFEVHDTQKKAd 528
Cdd:PLN02900 484 VAATDDFLKYDWlSDHEAVVKAILTGGGFVESVSEGDEVGIVLDKTSFYAESGGQIGDTGVLEGSGgAVVEVSDVQKAG- 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 529 GVFIHIGEVKSGQARMSECVELTVDGVRRKKIRVNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEE 608
Cdd:PLN02900 563 GFVLHIGTVTEGSVSVGDAVTCKVDYDRRRRIAPNHTATHLLNSALKEVLGDHVDQKGSLVAFEKLRFDFSHGKPMTPEE 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 609 LEKIEDLANEIVLQNSEVTTRLMLVDDA--ISeGAMALFGEKYGDEVRVVSMGnrlekGKLksrwSIELCGGTHVERTGD 686
Cdd:PLN02900 643 LREVESLVNEWIGDALPVEAKEMPLADAkrIN-GLRAVFGEKYPDPVRVVSVG-----GVY----SMELCGGTHVSNTAE 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 687 IGLIHIVSESSVAAGVRRIEALTGTAARLYLSRQDARVHEIADLLKTSATDVE------------------------ERV 742
Cdd:PLN02900 713 AEAFKLLSEEGIAKGIRRITAVTGGAAVEAINAADSLERELDSALKVEGSDLEkkvaslksrvdaavipaakkeeirARV 792
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 743 RILLEDRRKLEKELNDERKKSVLSGGIVKSDQediTIINGISFM-GRVVKNISPRDLKTLVDSGKKKIGSGVVAFIGVSE 821
Cdd:PLN02900 793 SALQKELRAAQKEAAALRAKLAVAKATELASK---ALSAGKSVLvARLDVGVDAAALKEAAEKVIAKLGDPAAVVLSSDE 869
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499494246 822 -DGKGSAVLGVTDDLTHK-LNAVDLVRILsGILGGQGGGGRPDMAQSGGPKGNKADEALAVLKA 883
Cdd:PLN02900 870 eKGKVSLVAAVPPGVVKKgLKAGKWLGAI-AKLCGGGGGGKPGFAQGQGRDAEKLDAALEKARA 932
|
|
| tRNA-synt_2c |
pfam01411 |
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be ... |
7-556 |
0e+00 |
|
tRNA synthetases class II (A); Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Pssm-ID: 279719 [Multi-domain] Cd Length: 548 Bit Score: 747.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 7 IRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLE-QRPYKQATTAQKCVRAGgkhnDLDNVGYTAR 85
Cdd:pfam01411 2 IRQTFLDFFEKKGHTRVPSSPVVPRNDPTLLFTNAGMNQFKPIFLGGVaKPPYNRATNSQKCIRAG----DLENVGRTGR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 86 HHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKISGLPDEKIVRIATADNFWAMGD 165
Cdd:pfam01411 78 HHTFFEMLGNFSFGDYFKEEAIEYAWELLTKELGLPPERLYVTVFEWDDEAGPIWEKIVGGPEERILRFGDKDNFWEMGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 166 TGPCGPCSEIFYDHGDEIWGGPPGSA-YEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQGGHDN 244
Cdd:pfam01411 158 TGPCGPCSEIDYDRGEEIGGWDSGGTpTADDDRFLEIWNLVFMQFNRENDGTLKPLPKKSIDTGMGLERLVAVLQDVRSN 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 245 YDIDLFRALIAVSQEITGVKATGDFIA--SHRVIADHLRSSAFLIADGVLPSNEGRGYVLRRIMRRAMRHAHLLGAKEPL 322
Cdd:pfam01411 238 YDTDVFIPVIELIEEISGARYYTVDETdeAYRVIADHTRALTFALADGVVPSNEGRGYVLRRILRRAVRHAKKLGLKEPF 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 323 MWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDLKEG-DHLNGEIAFKLYDTYGFPLDL 401
Cdd:pfam01411 318 LYDLVPTVVEVLGDAYPELKEDEDFIQEILELEEERFAKTLERGLRLLERLIAKLKKGkKTLPGEDAFKLYDTYGFPVDL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 402 TQDALRCRGISVDVAAFNKAMEGQKAKARANWSGSGEtvtEAIWFSVRDQLGATEFLGYETEKSEGILTALVRDGEIVDD 481
Cdd:pfam01411 398 TKEIAEERGLKVDMPGFEYAMVEQRERSKQAVKEKGE---KLDVSALKELPATTEFLGYDDLESEAKILALPKDGEFVAE 474
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499494246 482 ISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQkKADGVFIHIGEVKSGQARMSECVELTVDGVR 556
Cdd:pfam01411 475 VLAGQEGGVILDRTPFYAESGGQIGDTGYIIGDGGEFRVTDVQ-KYGGVVVHKGKLESGKLKVGDKVIAVIDEDR 548
|
|
| PRK01584 |
PRK01584 |
alanyl-tRNA synthetase; Provisional |
5-708 |
2.66e-154 |
|
alanyl-tRNA synthetase; Provisional
Pssm-ID: 234962 [Multi-domain] Cd Length: 594 Bit Score: 465.79 E-value: 2.66e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 5 NSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAGgkhnDLDNVGyTA 84
Cdd:PRK01584 4 DELRKKYIDFFKSKGHVEIAGKSLIPENDPTVLFTTAGMHPLVPYLLGEPHPSGTRLVDVQKCLRTG----DIDEVG-DL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 85 RHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCL--PEDKLLVTVYHNDDV------STELWRKIsGLPDEKIVRIAT 156
Cdd:PRK01584 79 SHLTFFEMLGNWSLGAYFKEESIKYSFEFLTSPDYLniPKDKLYVTVFEGDEEiprdeeTASVWESL-GIPKDRIFYLSR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 157 ADNFWA-MGDTGPCGPCSEIFYDHGDEIWGGPPGSAYEDGdRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIA 235
Cdd:PRK01584 158 EHNWWGpVGETGPCGPDTEIFVDTGKPKCSVNCRPTCSCG-KYFEIWNNVFMQYNKDEDGNYEELKRKCVDTGMGIERTI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 236 AVLQGGHDNYDIDLFRALIAVSQEITGvKATGDFIA---SHRVIADHLRSSAFLIAD--GVLPSNEGRGYVLRRIMRRAM 310
Cdd:PRK01584 237 AFLQGKSSVYDTEAFTPIIKRIEKISG-KIYGQNEEddrSIRIIADHIRAACFILGDpfVVLPSNVGQGYVLRRLIRRSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 311 RHAHLLGAKEPLMWRLLPVLIHEMGQAYPELVRAESLISETLKLEEIRFRKTLERGLGLLSEASTDLKEGDHLNGEIAFK 390
Cdd:PRK01584 316 RHAKKLGIESHFLADLVDSVEEIYGSFYPELTEKKDFIKEELNKEEEKFFKTLRKGEQEFIKLIPNLGSSKIIPGDIAFK 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 391 LYDTYGFPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARanwsgsgetvteaiwfsvrdqlgateflgyeteksegilt 470
Cdd:PRK01584 396 LYDTYGFPYEITEELASEYGFTVDREGFDEHFKKHQKVSK---------------------------------------- 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 471 alvrdgeivddissgqkailvvnqtpfygesggqigdsgtisgknfvfevhdtqKKADGVFihigevKSGqarMSECVEL 550
Cdd:PRK01584 436 ------------------------------------------------------KGADKVF------KGG---LADHSYE 452
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 551 TVDgvrrkkirvNHSATHLLHEALRQVLGSHVTQKGSLVSPDRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRL 630
Cdd:PRK01584 453 TTK---------LHTATHLLHKALRLVLGDHVRQKGSNITAERLRFDFSHPEKMTDDEIKKVEDIVNLQIKNDLSVKKEV 523
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499494246 631 MLVDDAISEGAMALFGEKYGDEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIEAL 708
Cdd:PRK01584 524 MSLEEAREKGAMALFGEKYEDIVKVYEIDG----------FSKEVCGGPHVENTGELGTFKIQKEQSSSSGVRRIRAI 591
|
|
| AlaRS_core |
cd00673 |
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is ... |
4-240 |
9.86e-129 |
|
Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.
Pssm-ID: 238360 [Multi-domain] Cd Length: 232 Bit Score: 385.95 E-value: 9.86e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 4 VNSIRSTFLDYFQLNGHKIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKQATTAQKCVRAGGKHNdldnVGYT 83
Cdd:cd00673 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVNSQKCIRAGDIDN----VGKT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 84 ARHHTFFEMLGNFSFGDYFKEEAIFLSWNLLTKEFCLPEDKLLVTVYHNDDVSTELWRKISGLPDEKIVRIATADNFWAM 163
Cdd:cd00673 77 GRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKDRLYVSVFEGDDEEEAIWWWKIGLPGIRIERIGFKDNFWEM 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499494246 164 GDTGPCGPCSEIFYDHGDEIWGGPpgSAYEDGDRFIEIWNLVFMQYEQVNKEKRVELPHPSIDTGMGLERIAAVLQG 240
Cdd:cd00673 157 GGNGPCGPCSEIFYDRGEERDAAS--LPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVWVLQG 231
|
|
| AlaX |
COG2872 |
Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis] ... |
490-706 |
2.47e-33 |
|
Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis];
Pssm-ID: 442119 [Multi-domain] Cd Length: 238 Bit Score: 128.77 E-value: 2.47e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 490 LVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKKADGVfIHIGEvKSGQARMSECVELTVDGVRRKKIRVNHSATHL 569
Cdd:COG2872 28 VVLDRTAFYPTGGGQPGDTGTLVWDGKEIRVVDVRKEDGEI-VHVLE-GAPLPEVGDEVTGEIDWERRYRHMRLHTALHL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 570 LHEALRQVLGSHVTqkGSLVSPDRLRFDFSHPkSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDAisegamalfgEKY 649
Cdd:COG2872 106 LSAVVYREYGAPVT--GGQIGEDRARIDFDLP-EFDEEDLEEIEAEANELIAADLPVRIYWITREEL----------EAI 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499494246 650 GDEVRvvSMGNRLEKGKLKSR------WSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIE 706
Cdd:COG2872 173 PGLVR--TMSVLPPPGVGRVRiveiggVDLQPCGGTHVANTGEIGRIKITKIEKKGKGNRRVY 233
|
|
| a_tRNA_ed_AlaXM |
NF040865 |
alanyl-tRNA editing protein AlaXM; |
490-706 |
9.06e-25 |
|
alanyl-tRNA editing protein AlaXM;
Pssm-ID: 468802 [Multi-domain] Cd Length: 234 Bit Score: 103.85 E-value: 9.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 490 LVVNQTPFYGESGGQIGDSGTISGKNFVFEVHDTQKKADGVfIHIGEvKSGQARMSECVELTVDGVRRKKIRVNHSATHL 569
Cdd:NF040865 26 VVLDRTAFYPTGGGQPHDTGTLVRDDKEFRVVDVRKEGGEI-AHVVD-RAPGLKPGDKVKGEIDWDRRYRLMRYHTASHI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 570 LHEALRQVLGSHVTqkGSLVSPDRLRFDFSHPkSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDAISEGAMALFGEKY 649
Cdd:NF040865 104 LSAVLYREYGALIT--GGQISPDKARVDFSLE-NFDRELLEEIIEEANEIIAEGIEVKIYWLPREEALKIPGLVRLAKRL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 650 G---DEVRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRIE 706
Cdd:NF040865 181 PpeiEEVRIVEIEG----------VDIQADGGTHVKNTGEIGEIKILKRENKGKGNKRLY 230
|
|
| tRNA_SAD |
smart00863 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of ... |
653-705 |
2.27e-16 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this SAD domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 197931 [Multi-domain] Cd Length: 43 Bit Score: 73.19 E-value: 2.27e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 499494246 653 VRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRI 705
Cdd:smart00863 1 VRVVSIGD----------FSVELCGGTHVPNTGEIGAFKILSVSGAYWGLQRI 43
|
|
| tRNA_SAD |
pfam07973 |
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of ... |
653-705 |
3.83e-15 |
|
Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of threonyl/alanyl tRNA synthetase is a dimer. Within the tRNA synthetase class II dimer, the bound tRNA interacts with both monomers making specific interactions with the catalytic domain, the C-terminal domain, and this domain (the second additional domain). The second additional domain is comprised of a pair of perpendicularly orientated antiparallel beta sheets, of four and three strands, respectively, that surround a central alpha helix that forms the core of the domain.
Pssm-ID: 429764 [Multi-domain] Cd Length: 43 Bit Score: 69.78 E-value: 3.83e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 499494246 653 VRVVSMGNrlekgklksrWSIELCGGTHVERTGDIGLIHIVSESSVAAGVRRI 705
Cdd:pfam07973 1 VRVVSIGD----------FDVDLCGGTHVPNTGEIGAFKILKGESKNKGLRRI 43
|
|
| class_II_aaRS-like_core |
cd00768 |
Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA ... |
35-234 |
1.06e-13 |
|
Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Pssm-ID: 238391 [Multi-domain] Cd Length: 211 Bit Score: 70.99 E-value: 1.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 35 TLMFTNAGMVQFKNVFTGLEQRPYKQ--------ATTAQKCVRAGGKHNDLdnvgytaRHHTFFEMLGNFSFGDYFKEEA 106
Cdd:cd00768 44 PVGAENEEDLYLRPTLEPGLVRLFVShirklplrLAEIGPAFRNEGGRRGL-------RRVREFTQLEGEVFGEDGEEAS 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 107 IFLSWNLLTKefclpedkllvtvyhnddvstELWRKIsGLPDEKIVRIATADNFWAmgdtGPCGPCSEIFYDHGDeiwgg 186
Cdd:cd00768 117 EFEELIELTE---------------------ELLRAL-GIKLDIVFVEKTPGEFSP----GGAGPGFEIEVDHPE----- 165
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 499494246 187 ppgsayedgDRFIEIWNLVFMQYEQ--------VNKEKRVELPHPsIDTGMGLERI 234
Cdd:cd00768 166 ---------GRGLEIGSGGYRQDEQaraadlyfLDEALEYRYPPT-IGFGLGLERL 211
|
|
| DHHA1 |
pfam02272 |
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called ... |
742-883 |
4.32e-12 |
|
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members. This domains is also found in alanyl tRNA synthetase, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Pssm-ID: 396724 [Multi-domain] Cd Length: 139 Bit Score: 64.39 E-value: 4.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 742 VRILLEDRRKLEKELNDERKK--SVLSGGIVKSDQEditiINGISFM-GRVVKNISPRDLKTLVDSGKKKIGSGVVAFIG 818
Cdd:pfam02272 1 LESLNEELKELEKELEELKEAlaLLKAKELLEKAEE----INGVKVLvAEVGEGWDAGALGIAADRLKKKLGDPVIVLVA 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499494246 819 VSEDGKGSAVLGVTDDLthKLNAVDLVRILSgilggQGGGGR---PDMAQSGGPKGNKADEALAVLKA 883
Cdd:pfam02272 77 KEDGDKVKVSARSSKDK--GVDAGELLKEVA-----AILGGGgggHDLAAGAGIDAEKLDEALELLEE 137
|
|
| PLN02961 |
PLN02961 |
alanine-tRNA ligase |
490-705 |
4.52e-11 |
|
alanine-tRNA ligase
Pssm-ID: 178546 [Multi-domain] Cd Length: 223 Bit Score: 63.56 E-value: 4.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 490 LVVNQTPFYGESGGQIGDSGTI--SGKNFVFEVHDTQKKaDGVFIHIG-------EVKSGQARMSECVeLTVDGVRRKKI 560
Cdd:PLN02961 5 LVLDRTIFHPQGGGQPSDTGRIviSGGDTKFSVQDVRRK-DGVVYHYGvfegsnpESASPFEAGDEVT-VTVDESRRKLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 561 RVNHSATHLLHEALRQV-LGSHVTQKGsLVSPDRLRFDFShpKSVSLEELEK----IEDLANEIVLQNSEVTTRLMLVDD 635
Cdd:PLN02961 83 SRLHSAGHLLDVCMARVgLGPLEPGKG-YHFPDGPFVEYK--GKIPQGELDSkqdeLEAEANELIAEGGKVSAAVLPYDE 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499494246 636 AIS--EGAMALFGEKyGDEVRVVSMGNRLEKGklksrwsielCGGTHVERTGDIGLIHiVSESSVAAGVRRI 705
Cdd:PLN02961 160 AAElcGGSLPDYIAK-DSTPRIVKIGDSPGCP----------CGGTHVADVSEITSVK-VTQIRVKKGVTRV 219
|
|
| ThrS |
COG0441 |
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA ... |
563-688 |
6.54e-06 |
|
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440210 [Multi-domain] Cd Length: 639 Bit Score: 50.03 E-value: 6.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 563 NHSATHLLHEALRQVL-GSHVTqkgslVSP---DRLRFDFSHPKSVSLEELEKIEDLANEIVLQNSEVTTRLMLVDDAIS 638
Cdd:COG0441 72 RHSAAHLLAQAVKRLYpDAKLT-----IGPvieNGFYYDFDLERPFTPEDLEKIEKEMKEIIKEDLPIEREEVSREEAIE 146
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499494246 639 EgaMALFGEKY----------GDEVRVVSMGNrlekgklksrWsIELCGGTHVERTGDIG 688
Cdd:COG0441 147 L--FKEKGEPYkveliedipeDEEISLYRQGE----------F-VDLCRGPHVPSTGKIK 193
|
|
| |
