NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|499567681|ref|WP_011248464|]
View 

MULTISPECIES: YuzF family protein [Shouchella]

Protein Classification

YuzF family protein( domain architecture ID 10566798)

YuzF family protein is a DUF2642 domain-containing protein; similar to Bacillus subtilis protein YuzF

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2642 pfam10842
Protein of unknown function (DUF2642); This family of proteins with unknown function appear to ...
 9-66 8.82e-27

Protein of unknown function (DUF2642); This family of proteins with unknown function appear to be restricted to Bacillus spp.


:

Pssm-ID: 402456  Cd Length: 61  Bit Score: 92.31  E-value: 8.82e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 499567681   9 LHDPYVYGMLAKQIGTTIGVQTTRGALRGILKAVQPDHLVVEMGGTPFYVRSQQIIWV 66
Cdd:pfam10842  4 LVDPYVYQTLQSLLGQEVVVQTTRGSVRGILADVKPDHIVLEMGGTPFYIRIQQIVWV 61
 
Name Accession Description Interval E-value
DUF2642 pfam10842
Protein of unknown function (DUF2642); This family of proteins with unknown function appear to ...
 9-66 8.82e-27

Protein of unknown function (DUF2642); This family of proteins with unknown function appear to be restricted to Bacillus spp.


Pssm-ID: 402456  Cd Length: 61  Bit Score: 92.31  E-value: 8.82e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 499567681   9 LHDPYVYGMLAKQIGTTIGVQTTRGALRGILKAVQPDHLVVEMGGTPFYVRSQQIIWV 66
Cdd:pfam10842  4 LVDPYVYQTLQSLLGQEVVVQTTRGSVRGILADVKPDHIVLEMGGTPFYIRIQQIVWV 61
 
Name Accession Description Interval E-value
DUF2642 pfam10842
Protein of unknown function (DUF2642); This family of proteins with unknown function appear to ...
 9-66 8.82e-27

Protein of unknown function (DUF2642); This family of proteins with unknown function appear to be restricted to Bacillus spp.


Pssm-ID: 402456  Cd Length: 61  Bit Score: 92.31  E-value: 8.82e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 499567681   9 LHDPYVYGMLAKQIGTTIGVQTTRGALRGILKAVQPDHLVVEMGGTPFYVRSQQIIWV 66
Cdd:pfam10842  4 LVDPYVYQTLQSLLGQEVVVQTTRGSVRGILADVKPDHIVLEMGGTPFYIRIQQIVWV 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH