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Concise Results
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Full Results
YfcC family protein [Haemophilus influenzae]
Protein Classification
YfcC family protein ( domain architecture ID 10787488 )
YfcC family protein similar to Escherichia coli YfcC, which upregulates the expression of aceA and aceB, the key genes in glyoxylate shunt
List of domain hits
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
4-507
0e+00
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 571.70
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 4 S KKKK T F N FP S A FT ILF A I LI LA VG LTW V IP S G S Y SKLT ynstdnvfvvkaygvddktypattdtldnlnikiklsnft E 83
Cdd:COG1288 5 K KKKK K F K FP H A YV ILF I I IV LA AI LTW I IP A G E Y DRVE ---------------------------------------- D 44
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 84 G vik KPIAI PG T Y QR VEQ HHK G IE DI TKSMVE G TI EA V D VMV FI FVL GG MI GVIN R TG SFN AG LM ALV K K T KG N E FFIVF 163
Cdd:COG1288 45 G --- RTVVV PG S Y HY VEQ NPQ G LF DI FTAPIK G LV EA A D IIF FI LII GG AF GVIN K TG AID AG IG ALV R K L KG K E KLLIP 121
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 164 CVSV L MV LGGTT C G IE EE AV AFYPILVP VFL ALGYDAI VC V GA IFL A A SM G T A F STINPF S V V IA SNA AG IQFTE GIG F R 243
Cdd:COG1288 122 VLML L FA LGGTT F G MA EE TI AFYPILVP LAI ALGYDAI TG V AI IFL G A GI G F A A STINPF T V G IA QGI AG LPLFS GIG L R 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 244 ALGL V LGATCV I A Y LYW Y C KK I K A DP SF S YT YDD R EEFR Q R YM K nf D PNTTIP F SA R R KL I L TL F CIS F P IMI W GV MVG G 323
Cdd:COG1288 202 LVIF V VFTLIA I I Y VMR Y A KK V K K DP EK S LV YDD D EEFR K R FL K -- D DDEDPE F TG R H KL V L LV F ALG F V IMI Y GV LKL G 279
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 324 W W FP Q MAA S FL AIT I IIMF I S GLSE KDVV E S F TE GA SE L V G VS LIIGLARG VNLVL E Q G M I S DTIL DYM SN VV SG M P GSV 403
Cdd:COG1288 280 W Y FP E MAA L FL VMG I VAGI I G GLSE NKIA E A F VK GA KD L L G GA LIIGLARG ILVIM E D G K I L DTIL YGL SN LL SG L P PVL 359
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 404 F IL G QLV V FIF L GLI VPS S SG L A V L S MPIMAPLAD S VG IP R DIV V S A YNW G QYAMLFLA PT - G LVLV TL QMLHI P F D R W V 482
Cdd:COG1288 360 F AI G MFI V QSL L NFF VPS G SG Q A A L T MPIMAPLAD L VG VT R QTA V L A FQF G DGLTNLIT PT s G VLMA TL AIAGV P Y D K W L 439
490 500
....*....|....*....|....*
gi 499591371 483 KFV M P MIGC L L L IGSIL L VVQ V SLY 507
Cdd:COG1288 440 KFV W P LFLI L F L LAIVF L IIA V LIG 464
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
4-507
0e+00
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 571.70
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 4 S KKKK T F N FP S A FT ILF A I LI LA VG LTW V IP S G S Y SKLT ynstdnvfvvkaygvddktypattdtldnlnikiklsnft E 83
Cdd:COG1288 5 K KKKK K F K FP H A YV ILF I I IV LA AI LTW I IP A G E Y DRVE ---------------------------------------- D 44
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 84 G vik KPIAI PG T Y QR VEQ HHK G IE DI TKSMVE G TI EA V D VMV FI FVL GG MI GVIN R TG SFN AG LM ALV K K T KG N E FFIVF 163
Cdd:COG1288 45 G --- RTVVV PG S Y HY VEQ NPQ G LF DI FTAPIK G LV EA A D IIF FI LII GG AF GVIN K TG AID AG IG ALV R K L KG K E KLLIP 121
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 164 CVSV L MV LGGTT C G IE EE AV AFYPILVP VFL ALGYDAI VC V GA IFL A A SM G T A F STINPF S V V IA SNA AG IQFTE GIG F R 243
Cdd:COG1288 122 VLML L FA LGGTT F G MA EE TI AFYPILVP LAI ALGYDAI TG V AI IFL G A GI G F A A STINPF T V G IA QGI AG LPLFS GIG L R 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 244 ALGL V LGATCV I A Y LYW Y C KK I K A DP SF S YT YDD R EEFR Q R YM K nf D PNTTIP F SA R R KL I L TL F CIS F P IMI W GV MVG G 323
Cdd:COG1288 202 LVIF V VFTLIA I I Y VMR Y A KK V K K DP EK S LV YDD D EEFR K R FL K -- D DDEDPE F TG R H KL V L LV F ALG F V IMI Y GV LKL G 279
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 324 W W FP Q MAA S FL AIT I IIMF I S GLSE KDVV E S F TE GA SE L V G VS LIIGLARG VNLVL E Q G M I S DTIL DYM SN VV SG M P GSV 403
Cdd:COG1288 280 W Y FP E MAA L FL VMG I VAGI I G GLSE NKIA E A F VK GA KD L L G GA LIIGLARG ILVIM E D G K I L DTIL YGL SN LL SG L P PVL 359
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 404 F IL G QLV V FIF L GLI VPS S SG L A V L S MPIMAPLAD S VG IP R DIV V S A YNW G QYAMLFLA PT - G LVLV TL QMLHI P F D R W V 482
Cdd:COG1288 360 F AI G MFI V QSL L NFF VPS G SG Q A A L T MPIMAPLAD L VG VT R QTA V L A FQF G DGLTNLIT PT s G VLMA TL AIAGV P Y D K W L 439
490 500
....*....|....*....|....*
gi 499591371 483 KFV M P MIGC L L L IGSIL L VVQ V SLY 507
Cdd:COG1288 440 KFV W P LFLI L F L LAIVF L IIA V LIG 464
DcuC
pfam03606 C4-dicarboxylate anaerobic carrier;
17-504
7.05e-161
C4-dicarboxylate anaerobic carrier;
Pssm-ID: 427395 [Multi-domain]
Cd Length: 454
Bit Score: 464.10
E-value: 7.05e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 17 T ILF A I LILAVG LTW V IP S G SYS K LT ynstdnvfvvkaygvddktypattdtldnlniki KLSNFTE G VIK KP IAI P G TY 96
Cdd:pfam03606 1 G ILF I I AVGYAI LTW Y IP A G VLA K AG ---------------------------------- IILGIYS G ALG KP EVL P F TY 46
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 97 QRVEQHHKGIEDITKSMVE G TIE AVD VMV FI F VLGG MI G VIN RTG SFN AG LM AL V K KT KG N E FFIVFCVSVLMV LGGT TC 176
Cdd:pfam03606 47 KSTGYLMLDLPIEEYVKGL G MSR AVD LGM FI L VLGG FA G YMM RTG AID AG VK AL S K PL KG I E SPYILLLAAYFS LGGT VL 126
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 177 G IE EE A VAF Y PIL V P VFL ALGYD AIVCVG AI FL A ASM G TAF ST I NPF S VVIA SNA AG IQFTE G I G F R A L GL V LGATCV IA 256
Cdd:pfam03606 127 G MS EE T VAF M PIL F P IMV ALGYD SRTGAA AI CA A TAV G FLA ST S NPF D VVIA AQI AG LPLLD G F G L R L L PW V IITIIS IA 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 257 YL YW Y CK KIK A DP sfsy T Y DDRE E FR Q RY M KNFDPN TTI PF sa R R K LI L T L FCIS F PI M I WG -- V M V G GWWFP QM A AS FL 334
Cdd:pfam03606 207 YL HF Y AQ KIK D DP ---- V Y SEKD E SD Q HE M DEQSEV TTI FS -- R P K VY L I L PVLP F IL M L WG fg V I V N GWWFP EI A VL FL 280
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 335 A IT III M FI --- S GL S E KDV VE S F T EGA SE L V G VS L II GLARGV N L VLEQ GMI S DTIL DYM S NVV SG M PG SV FIL GQ L VV 411
Cdd:pfam03606 281 A MG III G FI rkf N GL G E NEI VE A F Y EGA AD L L G FA L VV GLARGV G L FAQG GMI I DTIL NLI S GAI SG L PG IL FIL VM L LI 360
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 412 FIFLGLI VPS S SG L A V L S MP I MAPLAD S VGIPR DIV V S A YNWGQYAMLFLA PT - G L V LV TL Q M LH I PFDR WVKFV M P MIG 490
Cdd:pfam03606 361 QALAAFV VPS G SG P A Y L T MP L MAPLAD L VGIPR AVL V L A MQFASGLGRIIS PT s G V V VA TL G M AR I SPFT WVKFV A P PVA 440
490
....*....|....
gi 499591371 491 CL L L I GS I LLVVQ V 504
Cdd:pfam03606 441 VG L I I VI I VTIIA V 454
PRK11588
PRK11588 putative basic amino acid antiporter YfcC;
2-504
4.95e-80
putative basic amino acid antiporter YfcC;
Pssm-ID: 236934 [Multi-domain]
Cd Length: 506
Bit Score: 258.39
E-value: 4.95e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 2 DA SK KKKTFNF P SAFT I L F AIL ILA VGL T W V I P S G SYS kltyns TDN V fvvk A Y G VD DK T Y pa T TDTL D NLNIK I KLSNF 81
Cdd:PRK11588 5 TE SK PTRRWAM P DTLV I I F FVA ILA ALA T Y V V P V G MFD ------ SQE V ---- Q Y Q VD GQ T K -- T RKVV D PHSFR I LTDEA 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 82 T E GV i KKPIAIPG T YQ rveqhhk GIEDITKSMV EG TIE ------ AV DVMV F IF V L GG MI G VIN RTG SFNA G LM AL VK KT K 155
Cdd:PRK11588 73 G E PE - YHRVQLFT T GD ------- ERPGLMNFPF EG LTS gskwgt AV GIIM F ML V I GG AF G IVM RTG TIDN G IL AL IR KT R 144
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 156 GNE FFIVFCVSV L MV LGG TTC G IE EEA V AF YP I LV P VFLA LGYD A I VC V GAIFL A ASM G T A F S TI NPFSV V IA SNA AG IQ 235
Cdd:PRK11588 145 GNE ILFIPVLFI L FS LGG AVF G MG EEA I AF AI I IA P LMVR LGYD S I TT V LVTYV A TQI G F A T S WM NPFSV A IA QGI AG VP 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 236 FTE G I G F R ALGL V LGATCVIAYLYW Y CKKI K AD P SF S YTYDDREE FR Q rymk NFDPNTTI PF SARRK L I L TLFCISFPIM 315
Cdd:PRK11588 225 VLS G S G L R IVMW V IFTLIGLIFTMV Y ASRV K KN P LL S RVHESDRF FR E ---- KQADVEQR PF TFGDW L V L LVLTAVMVWV 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 316 IWGV M V GG W WF P QM A AS F LAITII I MF I ------ S G LSEKDVVE SFTEGA SELVGVS L II G L A R G VN L V L ----- EQGMI 384
Cdd:PRK11588 301 IWGV V V NA W FI P EI A SQ F FTMGLV I GL I gvvfrl N G MTVNTMAS SFTEGA RMMLAPA L LV G F A K G IL L L L gggep GDPSV 380
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 385 SD TIL DYMSNVV SG M P GS V FILGQ L VVFIFLGLI V P S S SG L A V L S MP I MAPLAD S VG IP R DIV V S A YNW G QYAMLFLA PT 464
Cdd:PRK11588 381 LN TIL NSAGGAI SG L P DA V SAWFM L LFQSVFNFF V T S G SG Q A A L T MP L MAPLAD L VG VN R QVA V L A FQL G DGFTNIIY PT 460
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 499591371 465 GLV L V - TL QMLHIP F DR W V KF VMPMIGC L LLIG S ILLVVQV 504
Cdd:PRK11588 461 SAS L M a TL GVCRVD F GN W L KF IWRFLLL L FIMS S VVVIGAQ 501
ArsB_NhaD_permease
cd00625 Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
118-500
7.76e-03
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.
Pssm-ID: 238344 [Multi-domain]
Cd Length: 396
Bit Score: 38.77
E-value: 7.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 118 IE A V D VMVFIFVL G G MI -- GVINR TG S F N -- A GLM A LVK K TKGNEFFIVFCVS -- VLMVLGGTTC gieee AV AFY PI LVP 191
Cdd:cd00625 34 LS A I D WETILLLF G M MI ls AALEE TG L F D rl A AKL A RAS K GSRRLLLLLMLLT aa LSAFFSNDAT ----- AV LLT PI VLA 108
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 192 VFLA LG YDAI V C - VG A IFL AA SM G T A FST I - NP FSVV IAS n AA G IQ F TEGIG F R A LGLVLGATCVIAY LY WYCK K IKAD P 269
Cdd:cd00625 109 LLRK LG LSPP V P l LL A LAF AA NI G G A ATP I g NP PNLI IAS - LS G LG F LDFLA F M A PPALGLLLLLLGL LY LLFR K KLLL P 187
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 270 SFSYTYDDR E EFRQ R ymknfdpnttip FSARRK L I L T L FCISFPIMIWGVMVGGWWF pqma A SFL A ITIIIMFIS GL SEK 349
Cdd:cd00625 188 DEDKLTVLA E PLPA R ------------ PLLKKF L L L A L LLLLLFVLLFFFLIPLGLI ---- A LLG A LLLLLLLVR GL DPE 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 350 D V VE S F tegas ELVGVSLII GL argvn L VL EQGMI S DTI L DYMSNVVSGMP G SVFILGQ L VVFIFLG L IVPSS S GLA vl S 429
Cdd:cd00625 252 E V LK S V ----- DWGTLLFFA GL ----- F VL VGALE S TGL L EWLAELLVALV G LPPLAAL L LIGLLSA L LSNFI S NVP -- T 319
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499591371 430 MPIMA P L A D S VGI P r DIVVS A YNW G QYAMLF L APT G ----- LV L VTL -- QMLH I P F DRWV K FVM P MIGCL L LIGSIL L 500
Cdd:cd00625 320 VALLL P I A A S LAP P - EPAWL A LAL G STLGGN L TLI G slanl IP L GAA en AGVG I S F GEFL K VGL P LTLLS L VVSLLY L 396
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
4-507
0e+00
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 571.70
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 4 S KKKK T F N FP S A FT ILF A I LI LA VG LTW V IP S G S Y SKLT ynstdnvfvvkaygvddktypattdtldnlnikiklsnft E 83
Cdd:COG1288 5 K KKKK K F K FP H A YV ILF I I IV LA AI LTW I IP A G E Y DRVE ---------------------------------------- D 44
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 84 G vik KPIAI PG T Y QR VEQ HHK G IE DI TKSMVE G TI EA V D VMV FI FVL GG MI GVIN R TG SFN AG LM ALV K K T KG N E FFIVF 163
Cdd:COG1288 45 G --- RTVVV PG S Y HY VEQ NPQ G LF DI FTAPIK G LV EA A D IIF FI LII GG AF GVIN K TG AID AG IG ALV R K L KG K E KLLIP 121
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 164 CVSV L MV LGGTT C G IE EE AV AFYPILVP VFL ALGYDAI VC V GA IFL A A SM G T A F STINPF S V V IA SNA AG IQFTE GIG F R 243
Cdd:COG1288 122 VLML L FA LGGTT F G MA EE TI AFYPILVP LAI ALGYDAI TG V AI IFL G A GI G F A A STINPF T V G IA QGI AG LPLFS GIG L R 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 244 ALGL V LGATCV I A Y LYW Y C KK I K A DP SF S YT YDD R EEFR Q R YM K nf D PNTTIP F SA R R KL I L TL F CIS F P IMI W GV MVG G 323
Cdd:COG1288 202 LVIF V VFTLIA I I Y VMR Y A KK V K K DP EK S LV YDD D EEFR K R FL K -- D DDEDPE F TG R H KL V L LV F ALG F V IMI Y GV LKL G 279
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 324 W W FP Q MAA S FL AIT I IIMF I S GLSE KDVV E S F TE GA SE L V G VS LIIGLARG VNLVL E Q G M I S DTIL DYM SN VV SG M P GSV 403
Cdd:COG1288 280 W Y FP E MAA L FL VMG I VAGI I G GLSE NKIA E A F VK GA KD L L G GA LIIGLARG ILVIM E D G K I L DTIL YGL SN LL SG L P PVL 359
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 404 F IL G QLV V FIF L GLI VPS S SG L A V L S MPIMAPLAD S VG IP R DIV V S A YNW G QYAMLFLA PT - G LVLV TL QMLHI P F D R W V 482
Cdd:COG1288 360 F AI G MFI V QSL L NFF VPS G SG Q A A L T MPIMAPLAD L VG VT R QTA V L A FQF G DGLTNLIT PT s G VLMA TL AIAGV P Y D K W L 439
490 500
....*....|....*....|....*
gi 499591371 483 KFV M P MIGC L L L IGSIL L VVQ V SLY 507
Cdd:COG1288 440 KFV W P LFLI L F L LAIVF L IIA V LIG 464
DcuC
pfam03606 C4-dicarboxylate anaerobic carrier;
17-504
7.05e-161
C4-dicarboxylate anaerobic carrier;
Pssm-ID: 427395 [Multi-domain]
Cd Length: 454
Bit Score: 464.10
E-value: 7.05e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 17 T ILF A I LILAVG LTW V IP S G SYS K LT ynstdnvfvvkaygvddktypattdtldnlniki KLSNFTE G VIK KP IAI P G TY 96
Cdd:pfam03606 1 G ILF I I AVGYAI LTW Y IP A G VLA K AG ---------------------------------- IILGIYS G ALG KP EVL P F TY 46
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 97 QRVEQHHKGIEDITKSMVE G TIE AVD VMV FI F VLGG MI G VIN RTG SFN AG LM AL V K KT KG N E FFIVFCVSVLMV LGGT TC 176
Cdd:pfam03606 47 KSTGYLMLDLPIEEYVKGL G MSR AVD LGM FI L VLGG FA G YMM RTG AID AG VK AL S K PL KG I E SPYILLLAAYFS LGGT VL 126
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 177 G IE EE A VAF Y PIL V P VFL ALGYD AIVCVG AI FL A ASM G TAF ST I NPF S VVIA SNA AG IQFTE G I G F R A L GL V LGATCV IA 256
Cdd:pfam03606 127 G MS EE T VAF M PIL F P IMV ALGYD SRTGAA AI CA A TAV G FLA ST S NPF D VVIA AQI AG LPLLD G F G L R L L PW V IITIIS IA 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 257 YL YW Y CK KIK A DP sfsy T Y DDRE E FR Q RY M KNFDPN TTI PF sa R R K LI L T L FCIS F PI M I WG -- V M V G GWWFP QM A AS FL 334
Cdd:pfam03606 207 YL HF Y AQ KIK D DP ---- V Y SEKD E SD Q HE M DEQSEV TTI FS -- R P K VY L I L PVLP F IL M L WG fg V I V N GWWFP EI A VL FL 280
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 335 A IT III M FI --- S GL S E KDV VE S F T EGA SE L V G VS L II GLARGV N L VLEQ GMI S DTIL DYM S NVV SG M PG SV FIL GQ L VV 411
Cdd:pfam03606 281 A MG III G FI rkf N GL G E NEI VE A F Y EGA AD L L G FA L VV GLARGV G L FAQG GMI I DTIL NLI S GAI SG L PG IL FIL VM L LI 360
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 412 FIFLGLI VPS S SG L A V L S MP I MAPLAD S VGIPR DIV V S A YNWGQYAMLFLA PT - G L V LV TL Q M LH I PFDR WVKFV M P MIG 490
Cdd:pfam03606 361 QALAAFV VPS G SG P A Y L T MP L MAPLAD L VGIPR AVL V L A MQFASGLGRIIS PT s G V V VA TL G M AR I SPFT WVKFV A P PVA 440
490
....*....|....
gi 499591371 491 CL L L I GS I LLVVQ V 504
Cdd:pfam03606 441 VG L I I VI I VTIIA V 454
PRK11588
PRK11588 putative basic amino acid antiporter YfcC;
2-504
4.95e-80
putative basic amino acid antiporter YfcC;
Pssm-ID: 236934 [Multi-domain]
Cd Length: 506
Bit Score: 258.39
E-value: 4.95e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 2 DA SK KKKTFNF P SAFT I L F AIL ILA VGL T W V I P S G SYS kltyns TDN V fvvk A Y G VD DK T Y pa T TDTL D NLNIK I KLSNF 81
Cdd:PRK11588 5 TE SK PTRRWAM P DTLV I I F FVA ILA ALA T Y V V P V G MFD ------ SQE V ---- Q Y Q VD GQ T K -- T RKVV D PHSFR I LTDEA 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 82 T E GV i KKPIAIPG T YQ rveqhhk GIEDITKSMV EG TIE ------ AV DVMV F IF V L GG MI G VIN RTG SFNA G LM AL VK KT K 155
Cdd:PRK11588 73 G E PE - YHRVQLFT T GD ------- ERPGLMNFPF EG LTS gskwgt AV GIIM F ML V I GG AF G IVM RTG TIDN G IL AL IR KT R 144
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 156 GNE FFIVFCVSV L MV LGG TTC G IE EEA V AF YP I LV P VFLA LGYD A I VC V GAIFL A ASM G T A F S TI NPFSV V IA SNA AG IQ 235
Cdd:PRK11588 145 GNE ILFIPVLFI L FS LGG AVF G MG EEA I AF AI I IA P LMVR LGYD S I TT V LVTYV A TQI G F A T S WM NPFSV A IA QGI AG VP 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 236 FTE G I G F R ALGL V LGATCVIAYLYW Y CKKI K AD P SF S YTYDDREE FR Q rymk NFDPNTTI PF SARRK L I L TLFCISFPIM 315
Cdd:PRK11588 225 VLS G S G L R IVMW V IFTLIGLIFTMV Y ASRV K KN P LL S RVHESDRF FR E ---- KQADVEQR PF TFGDW L V L LVLTAVMVWV 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 316 IWGV M V GG W WF P QM A AS F LAITII I MF I ------ S G LSEKDVVE SFTEGA SELVGVS L II G L A R G VN L V L ----- EQGMI 384
Cdd:PRK11588 301 IWGV V V NA W FI P EI A SQ F FTMGLV I GL I gvvfrl N G MTVNTMAS SFTEGA RMMLAPA L LV G F A K G IL L L L gggep GDPSV 380
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 385 SD TIL DYMSNVV SG M P GS V FILGQ L VVFIFLGLI V P S S SG L A V L S MP I MAPLAD S VG IP R DIV V S A YNW G QYAMLFLA PT 464
Cdd:PRK11588 381 LN TIL NSAGGAI SG L P DA V SAWFM L LFQSVFNFF V T S G SG Q A A L T MP L MAPLAD L VG VN R QVA V L A FQL G DGFTNIIY PT 460
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 499591371 465 GLV L V - TL QMLHIP F DR W V KF VMPMIGC L LLIG S ILLVVQV 504
Cdd:PRK11588 461 SAS L M a TL GVCRVD F GN W L KF IWRFLLL L FIMS S VVVIGAQ 501
CitT
COG0471 Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
182-448
1.46e-06
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
Pssm-ID: 440239 [Multi-domain]
Cd Length: 369
Bit Score: 50.54
E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 182 A VAFY PI LVPVFL ALG YDAIVCV G ----- A I FL AAS M G TAFST I NPFSVV IA SNAAGIQFTEG I G F R --- AL GL VLGATC 253
Cdd:COG0471 55 A AMML PI ALSIAA ALG SEKRSKF G salll P I AF AAS I G GMGTL I GTPPNL IA AGLLEEATGIP I S F F ewm LV GL PVALVG 134
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 254 VIAYLYWYCKKIK ad P SFSYTYDDR E EF R QRY mknfdp NTTI P F S A R R K LI L TL F CI sfpi MIWGVMV G GWWFPQM A ASF 333
Cdd:COG0471 135 LLLLWLVLYRLLP -- P EIKEVPGSK E VI R EEL ------ AELG P L S R R E K IA L AI F AL ---- TVLLWIT G SLHGIPI A VVA 202
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 334 L AI t IIIMFIS G - L SE KD VVE S FTE G ASE L V G VS L II G L A rgvnlv LE QGMISDTIL D YMSNVVS G MPGSVFI L GQLVVF 412
Cdd:COG0471 203 L LG - AVLLLLT G v L TW KD AYK S IPW G VLL L F G GG L AL G A A ------ LE KTGLAAWLA D ALLPLLG G LSPLLLL L LLALLT 275
250 260 270
....*....|....*....|....*....|....*.
gi 499591371 413 IF L GLIV p S SSGL A V L SM PI MAP LA DSV G IPRDIVV 448
Cdd:COG0471 276 LL L TEFA - S NTAT A A L LL PI AIS LA QAL G VNPLPLA 310
GntT
COG2610 H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and ...
105-450
4.85e-06
H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism];
Pssm-ID: 442022 [Multi-domain]
Cd Length: 440
Bit Score: 48.96
E-value: 4.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 105 GIED I TK S MVE G --- T IEAV dvm VFIFV LG G M I G - VINRT G SFNAGLMALV KK TKGNE ffivfc VSVLM VL G G TTC GI -- 178
Cdd:COG2610 43 PLAK I VT S IMT G fgg T LGSI --- GLVIG LG A M L G k LLEDS G AAERIADTII KK FGEKR ------ APLAL VL A G FIL GI pv 113
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 179 -- EEEA V AFY P ILVPVFLAL G YDAIVCVG A IFLAA S MGTAFSTIN P f SVVI A SNAA G IQFTEG I GFRALGLVLGATCVIA 256
Cdd:COG2610 114 ff DVGF V ILA P LAFSLARRA G ISKLLIGL A LAAGL S TTHMLVPPT P - GPLA A AGIL G ADLGAV I LLGLIVAIPALIVGYL 192
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 257 Y LY W YC KK IKADP sfsytydd R E EFRQRYMKNFDPNTTI P fsarr KLI L T L FC I SF PI MI ----- WGVMVGGWWFPQMAA 331
Cdd:COG2610 193 Y AK W LG KK APVPA -------- P E GLAGEEDEEEEDDEEL P ----- SFG L A L LP I LL PI VL illgt IADLLPKDSALVQVL 259
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 332 S F LAIT II IMF I S ---------- GLS EKDVVESFT EG ASELVGVS LI I G LARGVNL VL EQGM I S D T I L D YM S nvvs G MPG 401
Cdd:COG2610 260 A F IGDP II ALL I G vlvailllrr GLS REELMKILN EG LKPAGLIL LI T G AGGAFGA VL AASG I G D A I A D AL S ---- G LGL 335
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 499591371 402 SVFI L GQ L VVFI f L GLIVP S SSGLAVLSMP I M APL ADSV G IPRDIV V S A 450
Cdd:COG2610 336 PPLL L AF L IAAL - L RGATG S ATVAMITAAG I L APL LLAL G VSPELL V L A 383
DctM
pfam06808 Tripartite ATP-independent periplasmic transporter, DctM component; This family contains a ...
164-498
2.20e-03
Tripartite ATP-independent periplasmic transporter, DctM component; This family contains a diverse range of predicted transporter proteins. Including the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers. Note that many family members are hypothetical proteins.
Pssm-ID: 284275 [Multi-domain]
Cd Length: 413
Bit Score: 40.32
E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 164 C V SVLMVL G GTTCGIEEEAVAFYPILV P VFLAL GY DAIVCVGAIFLAASM G TAFSTINPFSVVIASN A A --- G IQ F TE GI 240
Cdd:pfam06808 93 S V VGSALF G MISGSAVANVATVGSVTI P AMKRS GY PPSFAAAVEAASSTL G QIIPPSIGLIAFGMAF A G vsi G DL F MA GI 172
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 241 gfr AL GL VLGATCVI A - Y L Y WYCKKIKAD P SFS ytyddreefrqrymknfdpntti PFS A RRK L ILTLFCISF P IM I WGV 319
Cdd:pfam06808 173 --- IP GL LYAVGLML A v Y I Y AKRRNLPGT P RAL ----------------------- LPR A GQA L KDGWWALLL P FI I LIG 226
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 320 MVG G WWF P QM A --- A SFL A IT I IIMFISG L SEKD V VESFTEG A SELVG V SL I IGL A RGVNLV L EQGMISDTIL D YMSNVV 396
Cdd:pfam06808 227 ILL G IFT P TE A gay A VVY A LL I GVLVYRR L TLEE V AAALLQT A KTTAA V LF I LAA A GIFAGL L TITGVPFKLS D WLLSLG 306
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 397 S G MPG sv F ILGQLVVFIF LG LIVPSSSGLAV L S m PI M AP L A DSV GI - P RDIV V SAYNW G QYA m L FLA P T GL V L - V TLQML 474
Cdd:pfam06808 307 G G NLL -- F LILVNLLCLV LG MFLDPTAAIII L V - PI L AP A A AQL GI d P IHFG V VIVYN G SIG - L ITP P V GL A L f V AAGIA 382
330 340
....*....|....*....|....*...
gi 499591371 475 HIP F DRW VK ---- F VMPMIGC L L LI G S I 498
Cdd:pfam06808 383 KVS F EEV VK gvvp F LFVLVPA L V LI I S V 410
CitMHS
pfam03600 Citrate transporter;
115-442
4.75e-03
Citrate transporter;
Pssm-ID: 460985 [Multi-domain]
Cd Length: 342
Bit Score: 39.22
E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 115 E GTIEAV D VMVFIFV LG G MI -- GVIN RTG S F NAGLMA L VKKTK G NEFFIVFCVSVL ----- MV L GGTTC gieee AVAFY P 187
Cdd:pfam03600 31 E EALSGI D SPTILLL LG M MI ig AILE RTG L F DRLALK L LRLAG G KPRRLLVALMLA talls AF L SNDGT ----- VLIMI P 105
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 188 I LVPVFLA LG YDAIVCVG A IFL AA SM G TAFST I - N P FSVV IAS n A A G IQ F TEGIG F RALGLVLGATC V - IAY L YWYCK K I 265
Cdd:pfam03600 106 I VLALARR LG LPPSPLLI A LAF AA NI G GTATP I g D P PNII IAS - A L G LS F GDFGF F MFPPVGVALLL V g LLP L LLIFR K L 184
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 266 KAD psfsytyddreefrq R YMKNFDPNTTIPFSARR KL I L TLFC isfp IMIWG V MV G GWWFPQM A ASFLAITIIIMFISG 345
Cdd:pfam03600 185 LPV --------------- R KEEEAELEELRKRAIKD KL L L AISA ---- LVLAL V IL G FLLLSVL A LAGALLLLLTGVLDP 245
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 346 LSEKDV V ESF T egaselvg VSLII GL argvn LV L EQGMISDTIL D YMSNVVS G MP G SVFI L GQLVVFIF L GLIVP S SSGL 425
Cdd:pfam03600 246 EEALKA V DWS T -------- LLFFA GL ----- FI L VGALEKTGLA D ALADALG G LS G LLVA L ALILWLSA L LSAFI S NVPT 312
330
....*....|....*..
gi 499591371 426 A V L SM PI MAPL A DSV G I 442
Cdd:pfam03600 313 A A L MA PI IVGM A PAA G L 329
ArsB_NhaD_permease
cd00625 Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
118-500
7.76e-03
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.
Pssm-ID: 238344 [Multi-domain]
Cd Length: 396
Bit Score: 38.77
E-value: 7.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 118 IE A V D VMVFIFVL G G MI -- GVINR TG S F N -- A GLM A LVK K TKGNEFFIVFCVS -- VLMVLGGTTC gieee AV AFY PI LVP 191
Cdd:cd00625 34 LS A I D WETILLLF G M MI ls AALEE TG L F D rl A AKL A RAS K GSRRLLLLLMLLT aa LSAFFSNDAT ----- AV LLT PI VLA 108
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 192 VFLA LG YDAI V C - VG A IFL AA SM G T A FST I - NP FSVV IAS n AA G IQ F TEGIG F R A LGLVLGATCVIAY LY WYCK K IKAD P 269
Cdd:cd00625 109 LLRK LG LSPP V P l LL A LAF AA NI G G A ATP I g NP PNLI IAS - LS G LG F LDFLA F M A PPALGLLLLLLGL LY LLFR K KLLL P 187
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 270 SFSYTYDDR E EFRQ R ymknfdpnttip FSARRK L I L T L FCISFPIMIWGVMVGGWWF pqma A SFL A ITIIIMFIS GL SEK 349
Cdd:cd00625 188 DEDKLTVLA E PLPA R ------------ PLLKKF L L L A L LLLLLFVLLFFFLIPLGLI ---- A LLG A LLLLLLLVR GL DPE 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499591371 350 D V VE S F tegas ELVGVSLII GL argvn L VL EQGMI S DTI L DYMSNVVSGMP G SVFILGQ L VVFIFLG L IVPSS S GLA vl S 429
Cdd:cd00625 252 E V LK S V ----- DWGTLLFFA GL ----- F VL VGALE S TGL L EWLAELLVALV G LPPLAAL L LIGLLSA L LSNFI S NVP -- T 319
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499591371 430 MPIMA P L A D S VGI P r DIVVS A YNW G QYAMLF L APT G ----- LV L VTL -- QMLH I P F DRWV K FVM P MIGCL L LIGSIL L 500
Cdd:cd00625 320 VALLL P I A A S LAP P - EPAWL A LAL G STLGGN L TLI G slanl IP L GAA en AGVG I S F GEFL K VGL P LTLLS L VVSLLY L 396
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
