MULTISPECIES: FkbM family methyltransferase [Chelativorans]
class I SAM-dependent methyltransferase( domain architecture ID 106779)
class I SAM-dependent methyltransferase catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor
List of domain hits
Name | Accession | Description | Interval | E-value | |||
AdoMet_MTases super family | cl17173 | S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
49-182 | 1.26e-12 | |||
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). The actual alignment was detected with superfamily member TIGR01444: Pssm-ID: 473071 Cd Length: 143 Bit Score: 63.10 E-value: 1.26e-12
|
|||||||
Name | Accession | Description | Interval | E-value | ||||
fkbM_fam | TIGR01444 | methyltransferase, FkbM family; Members of this family are characterized by two well-conserved ... |
49-182 | 1.26e-12 | ||||
methyltransferase, FkbM family; Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548. Pssm-ID: 273628 Cd Length: 143 Bit Score: 63.10 E-value: 1.26e-12
|
||||||||
Methyltransf_21 | pfam05050 | Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to ... |
53-202 | 9.83e-10 | ||||
Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a methyltransferase. Pssm-ID: 428282 Cd Length: 170 Bit Score: 55.65 E-value: 9.83e-10
|
||||||||
COG4076 | COG4076 | Predicted RNA methylase [General function prediction only]; |
31-101 | 4.66e-08 | ||||
Predicted RNA methylase [General function prediction only]; Pssm-ID: 443253 [Multi-domain] Cd Length: 230 Bit Score: 51.96 E-value: 4.66e-08
|
||||||||
AdoMet_MTases | cd02440 | S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
48-101 | 4.42e-05 | ||||
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 41.26 E-value: 4.42e-05
|
||||||||
rADc | smart00650 | Ribosomal RNA adenine dimethylases; |
36-113 | 6.59e-04 | ||||
Ribosomal RNA adenine dimethylases; Pssm-ID: 128898 Cd Length: 169 Bit Score: 39.03 E-value: 6.59e-04
|
||||||||
PRK14968 | PRK14968 | putative methyltransferase; Provisional |
43-99 | 1.28e-03 | ||||
putative methyltransferase; Provisional Pssm-ID: 237872 [Multi-domain] Cd Length: 188 Bit Score: 38.34 E-value: 1.28e-03
|
||||||||
Name | Accession | Description | Interval | E-value | ||||
fkbM_fam | TIGR01444 | methyltransferase, FkbM family; Members of this family are characterized by two well-conserved ... |
49-182 | 1.26e-12 | ||||
methyltransferase, FkbM family; Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548. Pssm-ID: 273628 Cd Length: 143 Bit Score: 63.10 E-value: 1.26e-12
|
||||||||
Methyltransf_21 | pfam05050 | Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to ... |
53-202 | 9.83e-10 | ||||
Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a methyltransferase. Pssm-ID: 428282 Cd Length: 170 Bit Score: 55.65 E-value: 9.83e-10
|
||||||||
COG4076 | COG4076 | Predicted RNA methylase [General function prediction only]; |
31-101 | 4.66e-08 | ||||
Predicted RNA methylase [General function prediction only]; Pssm-ID: 443253 [Multi-domain] Cd Length: 230 Bit Score: 51.96 E-value: 4.66e-08
|
||||||||
RsmA | COG0030 | 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase ... |
36-111 | 5.66e-06 | ||||
16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) [Translation, ribosomal structure and biogenesis]; 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) is part of the Pathway/BioSystem: 16S rRNA modification Pssm-ID: 439801 [Multi-domain] Cd Length: 270 Bit Score: 45.89 E-value: 5.66e-06
|
||||||||
Pcm | COG2518 | Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ... |
42-135 | 6.55e-06 | ||||
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 442008 [Multi-domain] Cd Length: 197 Bit Score: 45.46 E-value: 6.55e-06
|
||||||||
AdoMet_MTases | cd02440 | S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
48-101 | 4.42e-05 | ||||
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 41.26 E-value: 4.42e-05
|
||||||||
Met_10 | pfam02475 | Met-10+ like-protein; The methionine-10 mutant allele of N. crassa codes for a protein of ... |
33-91 | 8.98e-05 | ||||
Met-10+ like-protein; The methionine-10 mutant allele of N. crassa codes for a protein of unknown function, Swiss:O27901. However, homologous proteins have been found in yeast suggesting this protein may be involved in methionine biosynthesis, transport and/or utilization. Pssm-ID: 396850 [Multi-domain] Cd Length: 198 Bit Score: 41.95 E-value: 8.98e-05
|
||||||||
TrmN6 | COG4123 | tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ... |
43-91 | 2.91e-04 | ||||
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification Pssm-ID: 443299 [Multi-domain] Cd Length: 238 Bit Score: 40.90 E-value: 2.91e-04
|
||||||||
ksgA | TIGR00755 | ribosomal RNA small subunit methyltransferase A; In both E. coli and Saccharomyces cerevisiae, ... |
36-101 | 3.93e-04 | ||||
ribosomal RNA small subunit methyltransferase A; In both E. coli and Saccharomyces cerevisiae, this protein is responsible for the dimethylation of two adjacent adenosine residues in a conserved hairpin of 16S rRNA in bacteria, 18S rRNA in eukaryotes. This adjacent dimethylation is the only rRNA modification shared by bacteria and eukaryotes. A single member of this family is present in each of the first 20 completed microbial genomes. This protein is essential in yeast, but not in E. coli, where its deletion leads to resistance to the antibiotic kasugamycin. Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase [Protein synthesis, tRNA and rRNA base modification] Pssm-ID: 273252 [Multi-domain] Cd Length: 254 Bit Score: 40.68 E-value: 3.93e-04
|
||||||||
rADc | smart00650 | Ribosomal RNA adenine dimethylases; |
36-113 | 6.59e-04 | ||||
Ribosomal RNA adenine dimethylases; Pssm-ID: 128898 Cd Length: 169 Bit Score: 39.03 E-value: 6.59e-04
|
||||||||
Gcd14 | COG2519 | tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ... |
43-86 | 9.63e-04 | ||||
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification Pssm-ID: 442009 [Multi-domain] Cd Length: 249 Bit Score: 39.37 E-value: 9.63e-04
|
||||||||
PRK14968 | PRK14968 | putative methyltransferase; Provisional |
43-99 | 1.28e-03 | ||||
putative methyltransferase; Provisional Pssm-ID: 237872 [Multi-domain] Cd Length: 188 Bit Score: 38.34 E-value: 1.28e-03
|
||||||||
COG3963 | COG3963 | Phosphatidylethanolamine N-methyltransferase [Lipid transport and metabolism]; |
36-78 | 3.47e-03 | ||||
Phosphatidylethanolamine N-methyltransferase [Lipid transport and metabolism]; Pssm-ID: 443163 Cd Length: 193 Bit Score: 37.11 E-value: 3.47e-03
|
||||||||
PCMT | pfam01135 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); |
43-135 | 6.19e-03 | ||||
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Pssm-ID: 395902 [Multi-domain] Cd Length: 205 Bit Score: 36.58 E-value: 6.19e-03
|
||||||||
Blast search parameters | ||||
|