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Conserved domains on  [gi|500020778|ref|WP_011701496|]
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flagellar motor stator protein MotA [Listeria welshimeri]

Protein Classification

flagellar motor stator protein MotA( domain architecture ID 10013003)

motility protein A (MotA) is a flagellar motor stator protein which is energized by a proton (H(+)) motive force

Gene Symbol:  motA
Gene Ontology:  GO:0006935|GO:1902600|GO:0120101
PubMed:  6090403|32931735

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-264 5.57e-152

flagellar motor protein MotA; Validated


:

Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 424.76  E-value: 5.57e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFTKEKMPDKVDVLV 80
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  81 QYKEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV 160
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQS-PEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 161 LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVE 240
Cdd:PRK08124 160 LGAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIE 239

                        250       260
                 ....*....|....*....|....
gi 500020778 241 ERLLSFLSPKEKDVLRNGKGKKTR 264
Cdd:PRK08124 240 EKLLGYLSPKERKKLEEGAEKNAE 263
 
Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-264 5.57e-152

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 424.76  E-value: 5.57e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFTKEKMPDKVDVLV 80
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  81 QYKEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV 160
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQS-PEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 161 LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVE 240
Cdd:PRK08124 160 LGAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIE 239

                        250       260
                 ....*....|....*....|....
gi 500020778 241 ERLLSFLSPKEKDVLRNGKGKKTR 264
Cdd:PRK08124 240 EKLLGYLSPKERKKLEEGAEKNAE 263
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-262 7.31e-96

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 282.35  E-value: 7.31e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFtKEKMPDKVDVLVQY 82
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAF-KGKKADYEELIELL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  83 KEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLG 162
Cdd:COG1291   80 VELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTD-PEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIG 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 163 AAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVEER 242
Cdd:COG1291  159 TVLGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEK 238

                        250       260
                 ....*....|....*....|
gi 500020778 243 LLSFLSPKEKDVLRNGKGKK 262
Cdd:COG1291  239 LRSFLPPSERPSFEEEELKG 258
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 100-217 3.82e-35

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 122.59  E-value: 3.82e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  100 SVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGAAMGLIHAMGEMSN--- 176
Cdd:pfam01618   1 AANSPEDRFLKKGLQLVVDGTD-PEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagp 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 500020778  177 -PDKLSEAIAAAFVCTIFGIFTGyVLWTPFANKLKVKSQKEV 217
Cdd:pfam01618  80 gLSALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
 
Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-264 5.57e-152

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 424.76  E-value: 5.57e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFTKEKMPDKVDVLV 80
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  81 QYKEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV 160
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQS-PEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 161 LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVE 240
Cdd:PRK08124 160 LGAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIE 239

                        250       260
                 ....*....|....*....|....
gi 500020778 241 ERLLSFLSPKEKDVLRNGKGKKTR 264
Cdd:PRK08124 240 EKLLGYLSPKERKKLEEGAEKNAE 263
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-262 7.31e-96

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 282.35  E-value: 7.31e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   3 ITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFtKEKMPDKVDVLVQY 82
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAF-KGKKADYEELIELL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  83 KEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLG 162
Cdd:COG1291   80 VELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTD-PEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIG 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 163 AAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVEER 242
Cdd:COG1291  159 TVLGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEK 238

                        250       260
                 ....*....|....*....|
gi 500020778 243 LLSFLSPKEKDVLRNGKGKK 262
Cdd:COG1291  239 LRSFLPPSERPSFEEEELKG 258
motC PRK09109
flagellar motor protein; Reviewed
 1-247 2.48e-65

flagellar motor protein; Reviewed


Pssm-ID: 181654 [Multi-domain]  Cd Length: 246  Bit Score: 204.41  E-value: 2.48e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFtKEKMPDKVDVLV 80
Cdd:PRK09109   1 MDVLSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVF-FPPRSDLEGGID 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  81 QYKEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGqSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV 160
Cdd:PRK09109  80 RIVEWSNTARKEGLLGLEDVADREPDPFARKGLQLLVDG-AEPESIRSVLEVEIDTQEHRDLQAAKVFESMGGYAPTIGI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 161 LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPRVVE 240
Cdd:PRK09109 159 IGAVMGLIHVMENLADPSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSIIHRQSRYREMLVEGLVAIAEGENPRSIE 238


                 ....*..
gi 500020778 241 ERLLSFL 247
Cdd:PRK09109 239 LKLQGYL 245
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 1-251 4.62e-51

flagellar motor protein MotA; Validated


Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 167.98  E-value: 4.62e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIA-GSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPwSDVKVVPKLFKILFTKEK--MPDKVD 77
Cdd:PRK08456   1 MDLSTILGMVLAVASISvGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHK-KYVKAAYKELKIVFKNPGvnLNERIK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  78 VLVqykEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPT 157
Cdd:PRK08456  80 QLV---ELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKD-LEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPT 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 158 LGVLGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPR 237
Cdd:PRK08456 156 MGLVGAVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPR 235

                        250
                 ....*....|....
gi 500020778 238 VVEERLLSFLSPKE 251
Cdd:PRK08456 236 DLEEKLLNYLSPGE 249
PRK06926 PRK06926
flagellar motor protein MotP; Reviewed
 2-268 5.76e-48

flagellar motor protein MotP; Reviewed


Pssm-ID: 180755 [Multi-domain]  Cd Length: 271  Bit Score: 160.65  E-value: 5.76e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   2 EITTIVGLVLAVIVIAGSFMIQNISLAMLFSAE--ALIVIILGTITAVMMAHPWSDVKVVPKLFKILFTKEK--MPDKVD 77
Cdd:PRK06926   5 DYLTPVGIFLGITIVVLGVISNSGLSGFLSFIDltSILIVTGGLCAALFISFSPKDLKLAPRVLKQAFQSQEddVEELVQ 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  78 VLVQYKEYAdeiRRSGVLALEDSVDEIEDPFMKRGMRLVVDGqSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPT 157
Cdd:PRK06926  85 TFVSLSEKA---RREGLLSLEAELEEVKDPFIKKGLLLAIDG-WEPETIRDIMMAEIAAMEERHRKGRRIFEKAGEYAPA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 158 LGVLGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAPR 237
Cdd:PRK06926 161 WGMIGTLVGLVLMLKNLNDPSTLGPNMAIALLTTLYGTLLANLVFLPIAAKLEEKTEEEVFVKQVIIEGVIGVQSGQNPR 240

                        250       260       270
                 ....*....|....*....|....*....|.
gi 500020778 238 VVEERLLSFLSPKEKDVLRNGKGKKTREVEE 268
Cdd:PRK06926 241 ILEEKLSVFSSKEDWTKEEEDRKKKEEVHEA 271
PRK08990 PRK08990
flagellar motor protein PomA; Reviewed
 1-254 6.19e-42

flagellar motor protein PomA; Reviewed


Pssm-ID: 181604 [Multi-domain]  Cd Length: 254  Bit Score: 144.41  E-value: 6.19e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIAGSfMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSD----VKVVPKLFkiLFtkeKMPDKV 76
Cdd:PRK08990   1 MDLATLIGLIGAFAFVIMA-MVLGGGIGMFVDVPSILIVFGGSLFVVLMKFNLGQffgaVKIAGKAF--MF---KIDKPE 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  77 DVLVQYKEYADEIRRSGVLALEDSvdEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAP 156
Cdd:PRK08990  75 DLIEQIVEMADAARKGGFLALEEA--EISNSFMQKGVDLLVDGHD-GDVVRAALEKDIALTEERHETGIGIFRAFGDVAP 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 157 TLGVLGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLRYMMIEGVVALQERNAP 236
Cdd:PRK08990 152 AMGMIGTLIGLVAMLSNMDDPKSIGPAMAVALLTTLYGAVLANMVAIPIADKLSLRMGEEMLNRNLIMDAVLAIQDGQNP 231

                        250
                 ....*....|....*...
gi 500020778 237 RVVEERLLSFLSPKEKDV 254
Cdd:PRK08990 232 RVIEGFLKNYLAEKKRKI 249
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 100-217 3.82e-35

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 122.59  E-value: 3.82e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  100 SVDEIEDPFMKRGMRLVVDGQSsPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGAAMGLIHAMGEMSN--- 176
Cdd:pfam01618   1 AANSPEDRFLKKGLQLVVDGTD-PEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagp 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 500020778  177 -PDKLSEAIAAAFVCTIFGIFTGyVLWTPFANKLKVKSQKEV 217
Cdd:pfam01618  80 gLSALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
PRK09110 PRK09110
flagellar motor stator protein MotA;
6-241 5.15e-20

flagellar motor stator protein MotA;


Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 87.14  E-value: 5.15e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   6 IVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFT--KEKMPDKVDVLVQYK 83
Cdd:PRK09110   4 IIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAALGAFIVGNPGKAIKATLKALPKLFKgpKYKKADYMDLLALLY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  84 EYADEIRRSGVLALEDsvdEIEDP--------------------FMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAA 143
Cdd:PRK09110  84 ELLRKARQEGMMALEA---HIENPeespifakypkilkdhhlvdFICDYLRLMISGNMNPHEIEALMDEEIETHHHEAEV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778 144 YAKIFASAGAYAPTLGVLGAAMGLIHAMGEMSNPDK-LSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHLrYM 222
Cdd:PRK09110 161 PAHALQKVADALPAFGIVAAVLGVVKTMGSIDQPPAvLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKM-YQ 239

                        250       260
                 ....*....|....*....|
gi 500020778 223 MI-EGVVALQERNAPRVVEE 241
Cdd:PRK09110 240 CIkVTLLASLNGYAPQIAVE 259
PRK06743 PRK06743
flagellar motor protein MotP; Reviewed
 1-209 2.47e-14

flagellar motor protein MotP; Reviewed


Pssm-ID: 136027  Cd Length: 254  Bit Score: 70.77  E-value: 2.47e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   1 MEITTIVGLVLAVIVIAGSFMIqniSLAMLFSAEALIVIILGTITAVMMAHPWSDVK-VVPKLFKILFTKEKMPDKVDVL 79
Cdd:PRK06743   1 VGIIVGFAIVIAAIMLGGGGIK---AFKNFLDVSSILIVIGGTTATIVVAYRFGEIKkYTKSIFTVLHRREEDLEQLTDL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  80 vqYKEYADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEfLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLG 159
Cdd:PRK06743  78 --FVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEDE-LKEVLMKDVETEVYELRKGAALLDKIGDFAPAWG 154

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 500020778 160 VLGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKL 209
Cdd:PRK06743 155 MIGTLIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKV 204
PRK12482 PRK12482
flagellar motor stator protein MotA;
6-219 1.77e-09

flagellar motor stator protein MotA;


Pssm-ID: 171532 [Multi-domain]  Cd Length: 287  Bit Score: 57.07  E-value: 1.77e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778   6 IVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTITAVMMAHPWSDVKVVPKLFKILFTKEKMPDKV--DVLVQYK 83
Cdd:PRK12482   4 LFGLLVVMGCVFGGYLMSGGSLSSIWQPGEIIIILGAGIGAMILGNPKSVLKEMWHQIKGVIRRKEYGVEFqrQLLLLLY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500020778  84 EYADEIRRSGVLALEDSVDEIEDP-----------------FMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAK 146
Cdd:PRK12482  84 ELLEMVQEGGLKRLDQHIEIPEESslfqkyplilqqkrlitFISDNFRLMAMGKINQHELEGILDQELDAVEEELLQPSR 163

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 500020778 147 IFASAGAYAPTLGVLGAAMGLIHAMGEM-SNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVHL 219
Cdd:PRK12482 164 SLQRIAEAMPGFGICAAVLGIIITMQSIdGSIAEIGLKVAAALVGTFLGVFICYCLMDPLANAMEQEIKKELSL 237
MotA_N pfam20560
Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein ...
 6-71 8.42e-04

Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein A (MotA). MotA is a membrane protein that forms the stator element of the flagellar motor complex together with MotB with 5:2 stoichiometry, which couples ion flow across the cytoplasmic membrane to generate torque, and thus, it is required for rotation of the flagellar motor. This domain contains conserved torque-generating charged residues at the C-terminal and is adjacent pfam01618, which represents MotA TMH3 and TMH4.


Pssm-ID: 466709 [Multi-domain]  Cd Length: 91  Bit Score: 37.76  E-value: 8.42e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 500020778    6 IVGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILG-TITAVMMAHPWSDVKVVPKLFKILFTKEK 71
Cdd:pfam20560   1 IIGIVVVLGCVFGGYALAGGHLGVLWQLPFELLIIGGaAIGAFIIANPMKVLKATLKALPKAFKGSK 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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