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Conserved domains on  [gi|500064038|ref|WP_011743955|]
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DUF3593 domain-containing protein [Chlorobium phaeobacteroides]

Protein Classification

DUF2499 and DUF3593 domain-containing protein( domain architecture ID 10566451)

DUF2499 and DUF3593 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2499 pfam10693
Protein of unknown function (DUF2499); Members of this family are found in plants, lower ...
 14-98 1.23e-31

Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes, and bacteria and the chloroplast where it is annotated as Ycf49 or Ycf49-like. The function is not known though several members are annotated as putative membrane proteins.


:

Pssm-ID: 463178  Cd Length: 87  Bit Score: 111.14  E-value: 1.23e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500064038   14 LSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWVGSFFIIAYHLTGD--SIPLLLDLSETVNLFGSA 91
Cdd:pfam10693   1 LSLPTWIIHISSVLEWLAAIWLIWRYGEVTGNRAWRGLALAMLPALVSAMCACTWHLFDNapSLEWLVTLQAALTLVGNC 80


                  ....*..
gi 500064038   92 ALLYAVL 98
Cdd:pfam10693  81 TLAAAAW 87
DUF3593 pfam12159
Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized. ...
 134-225 5.95e-28

Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.


:

Pssm-ID: 463477  Cd Length: 88  Bit Score: 101.88  E-value: 5.95e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500064038  134 FDAILQVSSIVYITFLVLLivvrKRDPEvFSPLTVAGFWFVLVFISFTVFSIYLATEVRGnLSLSHDDLLHGLAESLLTL 213
Cdd:pfam12159   1 ASPLFALSLFPYLGFLWFL----TRSKS-FPRLTLFGFYFLLVFVAVTIPAGIYAKVVYG-ESLANVDWLHGLAESFLTL 74

                          90
                  ....*....|..
gi 500064038  214 SNLMIVIGIHRQ 225
Cdd:pfam12159  75 SNLLIVLGFRQA 86
 
Name Accession Description Interval E-value
DUF2499 pfam10693
Protein of unknown function (DUF2499); Members of this family are found in plants, lower ...
 14-98 1.23e-31

Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes, and bacteria and the chloroplast where it is annotated as Ycf49 or Ycf49-like. The function is not known though several members are annotated as putative membrane proteins.


Pssm-ID: 463178  Cd Length: 87  Bit Score: 111.14  E-value: 1.23e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500064038   14 LSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWVGSFFIIAYHLTGD--SIPLLLDLSETVNLFGSA 91
Cdd:pfam10693   1 LSLPTWIIHISSVLEWLAAIWLIWRYGEVTGNRAWRGLALAMLPALVSAMCACTWHLFDNapSLEWLVTLQAALTLVGNC 80


                  ....*..
gi 500064038   92 ALLYAVL 98
Cdd:pfam10693  81 TLAAAAW 87
DUF3593 pfam12159
Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized. ...
 134-225 5.95e-28

Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.


Pssm-ID: 463477  Cd Length: 88  Bit Score: 101.88  E-value: 5.95e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500064038  134 FDAILQVSSIVYITFLVLLivvrKRDPEvFSPLTVAGFWFVLVFISFTVFSIYLATEVRGnLSLSHDDLLHGLAESLLTL 213
Cdd:pfam12159   1 ASPLFALSLFPYLGFLWFL----TRSKS-FPRLTLFGFYFLLVFVAVTIPAGIYAKVVYG-ESLANVDWLHGLAESFLTL 74

                          90
                  ....*....|..
gi 500064038  214 SNLMIVIGIHRQ 225
Cdd:pfam12159  75 SNLLIVLGFRQA 86
 
Name Accession Description Interval E-value
DUF2499 pfam10693
Protein of unknown function (DUF2499); Members of this family are found in plants, lower ...
 14-98 1.23e-31

Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes, and bacteria and the chloroplast where it is annotated as Ycf49 or Ycf49-like. The function is not known though several members are annotated as putative membrane proteins.


Pssm-ID: 463178  Cd Length: 87  Bit Score: 111.14  E-value: 1.23e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500064038   14 LSLPNWIIHLSSTLEWGIAALMMFRYGMITGRKDIRMFGISMLPHWVGSFFIIAYHLTGD--SIPLLLDLSETVNLFGSA 91
Cdd:pfam10693   1 LSLPTWIIHISSVLEWLAAIWLIWRYGEVTGNRAWRGLALAMLPALVSAMCACTWHLFDNapSLEWLVTLQAALTLVGNC 80


                  ....*..
gi 500064038   92 ALLYAVL 98
Cdd:pfam10693  81 TLAAAAW 87
DUF3593 pfam12159
Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized. ...
 134-225 5.95e-28

Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.


Pssm-ID: 463477  Cd Length: 88  Bit Score: 101.88  E-value: 5.95e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500064038  134 FDAILQVSSIVYITFLVLLivvrKRDPEvFSPLTVAGFWFVLVFISFTVFSIYLATEVRGnLSLSHDDLLHGLAESLLTL 213
Cdd:pfam12159   1 ASPLFALSLFPYLGFLWFL----TRSKS-FPRLTLFGFYFLLVFVAVTIPAGIYAKVVYG-ESLANVDWLHGLAESFLTL 74

                          90
                  ....*....|..
gi 500064038  214 SNLMIVIGIHRQ 225
Cdd:pfam12159  75 SNLLIVLGFRQA 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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