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Conserved domains on  [gi|500119072|ref|WP_011795077|]
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SGNH/GDSL hydrolase family protein [Paracidovorax citrulli]

Protein Classification

SGNH/GDSL hydrolase family protein( domain architecture ID 10139724)

SGNH/GDSL hydrolase family protein is a hydrolytic enzyme such as an esterase or lipase; may have multifunctional properties including broad substrate specificity and regiospecificity

Gene Ontology:  GO:0016788
PubMed:  15522763

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SGNH_hydrolase_like_7 cd04502
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
70-241 2.01e-96

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


:

Pssm-ID: 239946  Cd Length: 171  Bit Score: 280.33  E-value: 2.01e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  70 GVLFVGSSTIRLWTDLREDFRQLPVvINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSF 149
Cdd:cd04502    1 GILFYGSSSIRLWDTLADDLAPLPV-VNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYAGDNDLASGRTPEEVLRDFREL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 150 VRSVREALPDTRISYISIKPSPLRLSLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAG 229
Cdd:cd04502   80 VNRIRAKLPDTPIAIISIKPSPARWALRPKIRRFNALLKELAETRPNLTYIDVASPMLDADGKPRAELFQEDGLHLNDAG 159
                        170
                 ....*....|..
gi 500119072 230 YDLWRAVIGSYV 241
Cdd:cd04502  160 YALWRKVIKPAL 171
 
Name Accession Description Interval E-value
SGNH_hydrolase_like_7 cd04502
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
70-241 2.01e-96

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 239946  Cd Length: 171  Bit Score: 280.33  E-value: 2.01e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  70 GVLFVGSSTIRLWTDLREDFRQLPVvINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSF 149
Cdd:cd04502    1 GILFYGSSSIRLWDTLADDLAPLPV-VNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYAGDNDLASGRTPEEVLRDFREL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 150 VRSVREALPDTRISYISIKPSPLRLSLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAG 229
Cdd:cd04502   80 VNRIRAKLPDTPIAIISIKPSPARWALRPKIRRFNALLKELAETRPNLTYIDVASPMLDADGKPRAELFQEDGLHLNDAG 159
                        170
                 ....*....|..
gi 500119072 230 YDLWRAVIGSYV 241
Cdd:cd04502  160 YALWRKVIKPAL 171
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
62-242 4.05e-30

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 111.66  E-value: 4.05e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  62 KAGLPKAGGVLFVGSSTIRLWTD---------LREDFRQLPV-VINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDN 131
Cdd:COG2755    2 KAAAGKPLRIVALGDSITAGYGAsrergwpalLARRLAAADVrVVNAGISGATTADLLARLDRDLLALKPDLVVIELGTN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 132 DLAEGR--TPEQVLESFQSFVRSVREALPDTRISYISIKPSPLRLSLLPRMREANALLAQYVRTvPNSDFIDIFTPMLDA 209
Cdd:COG2755   82 DLLRGLgvSPEEFRANLEALIDRLRAAGPGARVVLVTPPPRLRPNYLNERIEAYNAAIRELAAE-YGVPLVDLYAALRDA 160
                        170       180       190
                 ....*....|....*....|....*....|...
gi 500119072 210 QGLPraELFGADHLHMNDAGYDLWRAVIGSYVG 242
Cdd:COG2755  161 GDLP--DLLTADGLHPNAAGYRLIAEAVLPALK 191
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
70-232 1.53e-18

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 80.67  E-value: 1.53e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072   70 GVLFVGSSTIRLWTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSF 149
Cdd:pfam13472  11 GATGGDRSYPGWLARLLARRLGADVVNNLGISGATTRLDLLERLDDVLRLKPDLVVILLGTNDLGRGVSAARAAANLEAL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  150 VRSVREALPDTRISYISIKP-SPLRLSLLPRMREANALLAQYVRTV---PNSDFIDIFTPMLDaQGLPRAELFGADHLHM 225
Cdd:pfam13472  91 IDALRAAGPDARVLLIGPLPvGPPPPLDERRLNARIAEYNAAIREVaaeRGVPYVDLWDALRD-DGGWLPDLLADDGLHP 169

                  ....*..
gi 500119072  226 NDAGYDL 232
Cdd:pfam13472 170 NAAGYRL 176
 
Name Accession Description Interval E-value
SGNH_hydrolase_like_7 cd04502
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
70-241 2.01e-96

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 239946  Cd Length: 171  Bit Score: 280.33  E-value: 2.01e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  70 GVLFVGSSTIRLWTDLREDFRQLPVvINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSF 149
Cdd:cd04502    1 GILFYGSSSIRLWDTLADDLAPLPV-VNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYAGDNDLASGRTPEEVLRDFREL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 150 VRSVREALPDTRISYISIKPSPLRLSLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAG 229
Cdd:cd04502   80 VNRIRAKLPDTPIAIISIKPSPARWALRPKIRRFNALLKELAETRPNLTYIDVASPMLDADGKPRAELFQEDGLHLNDAG 159
                        170
                 ....*....|..
gi 500119072 230 YDLWRAVIGSYV 241
Cdd:cd04502  160 YALWRKVIKPAL 171
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
62-242 4.05e-30

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 111.66  E-value: 4.05e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  62 KAGLPKAGGVLFVGSSTIRLWTD---------LREDFRQLPV-VINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDN 131
Cdd:COG2755    2 KAAAGKPLRIVALGDSITAGYGAsrergwpalLARRLAAADVrVVNAGISGATTADLLARLDRDLLALKPDLVVIELGTN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 132 DLAEGR--TPEQVLESFQSFVRSVREALPDTRISYISIKPSPLRLSLLPRMREANALLAQYVRTvPNSDFIDIFTPMLDA 209
Cdd:COG2755   82 DLLRGLgvSPEEFRANLEALIDRLRAAGPGARVVLVTPPPRLRPNYLNERIEAYNAAIRELAAE-YGVPLVDLYAALRDA 160
                        170       180       190
                 ....*....|....*....|....*....|...
gi 500119072 210 QGLPraELFGADHLHMNDAGYDLWRAVIGSYVG 242
Cdd:COG2755  161 GDLP--DLLTADGLHPNAAGYRLIAEAVLPALK 191
sialate_O-acetylesterase_like2 cd01828
sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases ...
71-237 1.21e-27

sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238866  Cd Length: 169  Bit Score: 104.28  E-value: 1.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  71 VLFVGSStIRLWTDLREDFRQLPVViNRGFGGSTMADCqYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSFV 150
Cdd:cd01828    2 LVFLGDS-LTEGGPWALLFPDVKVA-NRGISGDTTRGL-LARLDEDVALQPKAIFIMIGINDLAQGTSDEDIVANYRTIL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 151 RSVREALPDTRISYISIKPSPLRLSLLPR-MREANALLAQYVRTvPNSDFIDIFTPMLDAQGLPRAElFGADHLHMNDAG 229
Cdd:cd01828   79 EKLRKHFPNIKIVVQSILPVGELKSIPNEqIEELNRQLAQLAQQ-EGVTFLDLWAVFTNADGDLKNE-FTTDGLHLNAKG 156

                 ....*...
gi 500119072 230 YDLWRAVI 237
Cdd:cd01828  157 YAVWAAAL 164
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
70-232 1.53e-18

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 80.67  E-value: 1.53e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072   70 GVLFVGSSTIRLWTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSF 149
Cdd:pfam13472  11 GATGGDRSYPGWLARLLARRLGADVVNNLGISGATTRLDLLERLDDVLRLKPDLVVILLGTNDLGRGVSAARAAANLEAL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  150 VRSVREALPDTRISYISIKP-SPLRLSLLPRMREANALLAQYVRTV---PNSDFIDIFTPMLDaQGLPRAELFGADHLHM 225
Cdd:pfam13472  91 IDALRAAGPDARVLLIGPLPvGPPPPLDERRLNARIAEYNAAIREVaaeRGVPYVDLWDALRD-DGGWLPDLLADDGLHP 169

                  ....*..
gi 500119072  226 NDAGYDL 232
Cdd:pfam13472 170 NAAGYRL 176
SGNH_hydrolase cd00229
SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary ...
71-240 9.89e-18

SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 238141 [Multi-domain]  Cd Length: 187  Bit Score: 78.61  E-value: 9.89e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  71 VLFVGSSTIRLWTDLREDFRQLP-------------VVINRGFGGSTMADCQYFVKN--LVLQYQPRHVMVYAGDNDLAE 135
Cdd:cd00229    1 ILVIGDSITAGYGASSGSTFYSLllyllllaggpgvEVINLGVSGATTADALRRLGLrlALLKDKPDLVIIELGTNDLGR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 136 G--RTPEQVLESFQSFVRSVREALPDTRISYISIKPSPLRL----SLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDA 209
Cdd:cd00229   81 GgdTSIDEFKANLEELLDALRERAPGAKVILITPPPPPPREgllgRALPRYNEAIKAVAAENPAPSGVDLVDLAALLGDE 160
                        170       180       190
                 ....*....|....*....|....*....|.
gi 500119072 210 qglpRAELFGADHLHMNDAGYDLWRAVIGSY 240
Cdd:cd00229  161 ----DKSLYSPDGIHPNPAGHKLIAEALASA 187
NnaC_like cd01841
NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases ...
69-241 1.03e-13

NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.


Pssm-ID: 238879  Cd Length: 174  Bit Score: 67.35  E-value: 1.03e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  69 GGVLFVGSSTIRLWtDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQS 148
Cdd:cd01841    1 KNIVFIGDSLFEGW-PLYEAEGKGKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFLGTNDIGKEVSSNQFIKWYRD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 149 FVRSVREALPDTRISYISIKPSPLRLSLLPRMRE----ANALLaQYVRTVPNSDFIDIFTPMLDAQGlPRAELFGADHLH 224
Cdd:cd01841   80 IIEQIREEFPNTKIYLLSVLPVLEEDEIKTRSNTriqrLNDAI-KELAPELGVTFIDLNDVLVDEFG-NLKKEYTTDGLH 157
                        170
                 ....*....|....*..
gi 500119072 225 MNDAGYDLWRAVIGSYV 241
Cdd:cd01841  158 FNPKGYQKLLEILEEYL 174
PAF_acetylesterase_like cd01820
PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor ...
49-233 1.88e-13

PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.


Pssm-ID: 238858  Cd Length: 214  Bit Score: 67.70  E-value: 1.88e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  49 RWQSSMDAFAAADKAGLPKaggVLFVGSSTIRLW--TDL---REDFRQLPVvINRGFGGSTMADCQYFVKNLVLQY-QPR 122
Cdd:cd01820   16 RWMSRHERFVAEAKQKEPD---VVFIGDSITQNWefTGLevwRELYAPLHA-LNFGIGGDRTQNVLWRLENGELDGvNPK 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 123 HVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDTRISYISI-----KPSPLRLsllpRMREANALLAQYVRTVPNS 197
Cdd:cd01820   92 VVVLLIGTNNIGHTTTAEEIAEGILAIVEEIREKLPNAKILLLGLlprgqNPNPLRE----RNAQVNRLLAVRYDGLPNV 167
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 500119072 198 DFIDIFTPMLDAQGLPRAELFgADHLHMNDAGYDLW 233
Cdd:cd01820  168 TFLDIDKGFVQSDGTISHHDM-PDYLHLTAAGYRKW 202
XynB_like cd01833
SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted ...
97-237 8.87e-13

SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238871  Cd Length: 157  Bit Score: 64.56  E-value: 8.87e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  97 NRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDTRISYISIKPSPLRlSL 176
Cdd:cd01833   17 HEGHSGYLIDQIAAAAADWVLAAKPDVVLLHLGTNDLVLNRDPDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDA-SG 95
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 500119072 177 LPRMREANALLAQYVRTVPNSD----FIDIFTPMLDAQGLpraelfgADHLHMNDAGY----DLWRAVI 237
Cdd:cd01833   96 NARIAEYNAAIPGVVADLRTAGspvvLVDMSTGYTTADDL-------YDGLHPNDQGYkkmaDAWYEAL 157
Isoamyl_acetate_hydrolase_like cd01838
Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the ...
95-233 2.00e-12

Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases


Pssm-ID: 238876  Cd Length: 199  Bit Score: 64.20  E-value: 2.00e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  95 VINRGFGGSTMADCQYFVKNLVL---QYQPRHVMVYAGDNDLAEGRTPEQV-LESFQS----FVRSVREALPDTRIsyIS 166
Cdd:cd01838   35 VINRGFSGYNTRWALKVLPKIFLeekLAQPDLVTIFFGANDAALPGQPQHVpLDEYKEnlrkIVSHLKSLSPKTKV--IL 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 167 IKPSPLRLSLLPRMREA--------NALLAQY---VRTVP---NSDFIDIFTPMLDAQGLPRAELfgADHLHMNDAGYDL 232
Cdd:cd01838  113 ITPPPVDEEAWEKSLEDggsqpgrtNELLKQYaeaCVEVAeelGVPVIDLWTAMQEEAGWLESLL--TDGLHFSSKGYEL 190

                 .
gi 500119072 233 W 233
Cdd:cd01838  191 L 191
SGNH_hydrolase_like_2 cd01834
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
71-230 3.60e-12

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238872  Cd Length: 191  Bit Score: 63.47  E-value: 3.60e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  71 VLFVGSSTI-------RLWTDLREDFRQLPV-VINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQV 142
Cdd:cd01834    4 IVFIGNSITdrggyvgYVETYLAARYPELKLtFRNLGWSGDTVSDLAARRDRDVLPAKPDVVSIMFGINDSFRGFDDPVG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 143 LESFQS----FVRSVREALPDTRISYISikPSPLRLSLLPRMREA--NALLAQYVRTV-----PNS-DFIDIFTPMLDAQ 210
Cdd:cd01834   84 LEKFKTnlrrLIDRLKNKESAPRIVLVS--PIAYEANEDPLPDGAeyNANLAAYADAVrelaaENGvAFVDLFTPMKEAF 161
                        170       180
                 ....*....|....*....|
gi 500119072 211 GLPRAELFGADHLHMNDAGY 230
Cdd:cd01834  162 QKAGEAVLTVDGVHPNEAGH 181
SGNH_hydrolase_like_4 cd04501
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
82-232 1.82e-11

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 239945  Cd Length: 183  Bit Score: 61.19  E-value: 1.82e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  82 WTDLREDFRQLPVvINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREAlpdtr 161
Cdd:cd04501   22 WVNLLAEFLGKEV-INRGINGDTTSQMLVRFYEDVIALKPAVVIIMGGTNDIIVNTSLEMIKDNIRSMVELAEAN----- 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072 162 isyiSIKP---SPLRLSLLP----------RMREANALLAQYVRTVpNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDA 228
Cdd:cd04501   96 ----GIKVilaSPLPVDDYPwkpqwlrpanKLKSLNRWLKDYAREN-GLLFLDFYSPLLDERNVGLKPGLLTDGLHPSRE 170

                 ....
gi 500119072 229 GYDL 232
Cdd:cd04501  171 GYRV 174
Lipase_GDSL pfam00657
GDSL-like Lipase/Acylhydrolase;
55-230 4.17e-05

GDSL-like Lipase/Acylhydrolase;


Pssm-ID: 459892 [Multi-domain]  Cd Length: 210  Bit Score: 43.33  E-value: 4.17e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072   55 DAFAAADKAGlpkAGGVLFVGSSTIRLWTD-LREDFRQLPVVINRGFGGSTMADCQYFVKNLV-------LQYQPRHVMV 126
Cdd:pfam00657   6 DSLTDGGGDG---PGGRFSWGDLLADFLARkLGVPGSGYNHGANFAIGGATIEDLPIQLEQLLrlisdvkDQAKPDLVTI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  127 YAGDNDLAEGR-TPEQVLESFQSFVRSVREALPDTRISY----------ISIKPSPLRLSLLPRMREA-NALLAQYVR-- 192
Cdd:pfam00657  83 FIGANDLCNFLsSPARSKKRVPDLLDELRANLPQLGLGArkfwvhglgpLGCTPPKGCYELYNALAEEyNERLNELVNsl 162
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 500119072  193 -------TVPNSDFIDIFTPMLDAQGLPraelFGADHLHMNDAGY 230
Cdd:pfam00657 163 aaaaedaNVVYVDIYGFEDPTDPCCGIG----LEPDGLHPSEKGY 203
SGNH_hydrolase_like_6 cd01844
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
95-232 9.66e-04

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238881  Cd Length: 177  Bit Score: 39.23  E-value: 9.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500119072  95 VINRGFGGSTMADcqYFVKNLVLQYQPRHVMVYAGDNDLAEGRTpeqVLESFQSFVRSVREALPDTRISYISIKPSPLRL 174
Cdd:cd01844   34 VINLGFSGNARLE--PEVAELLRDVPADLYIIDCGPNIVGAEAM---VRERLGPLVKGLRETHPDTPILLVSPRYCPDAE 108
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 500119072 175 sLLPRMREAN-----ALLAQYVR----TVPNSDFIDIFTpMLDAQGLPRaelfgADHLHMNDAGYDL 232
Cdd:cd01844  109 -LTPGRGKLTlavrrALREAFEKlradGVPNLYYLDGEE-LLGPDGEAL-----VDGIHPTDLGHMR 168
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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