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MULTISPECIES: HPr(Ser) kinase/phosphatase [Lactococcus]

Protein Classification

HPr kinase/phosphorylase( domain architecture ID 11480925)

HPr kinase/phosphorylase catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of 'Ser-46' in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05428 PRK05428
HPr kinase/phosphorylase; Provisional
1-308 2.40e-161

HPr kinase/phosphorylase; Provisional


:

Pssm-ID: 235459 [Multi-domain]  Cd Length: 308  Bit Score: 451.55  E-value: 2.40e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933   1 MAVSVQDLLDKIHFHVIYStETALQKEITTSEIMRPGLEMAGYFDYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMA 80
Cdd:PRK05428   2 KSVTVKDLIEDLKLEVVAG-EEGLDREITTSDISRPGLELAGYFNYYHPERVQVLGKTEISYLNQLSEEERKERLKKLFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  81 KETPVVIVARNLEIPSEMVAAAKKADIVLLQSREATSRLNSVLTSFLDERLAERTTVHGVLMDIFGVGVLIQGASGIGKS 160
Cdd:PRK05428  81 LEPPCIIVTRGLEPPPELLEAAKEAGIPLLRTPLSTTRLISKLTNYLDRKLAPRTSVHGVLVDIYGIGVLITGESGIGKS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 161 ETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKA 240
Cdd:PRK05428 161 ETALELIKRGHRLVADDAVDIKRIGPDTLEGRCPELLQHLLEIRGLGIIDVRTLFGATAVRDKKRIQLVVELEEWDEDKE 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500159933 241 FDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMGFDATKTFEDRLTDLISHNKE 308
Cdd:PRK05428 241 YDRLGLDEETEEILGVKIPKITIPVRPGRNLAVIIEAAARNYRLKLMGYDAAEEFIERLRKLIEENES 308
 
Name Accession Description Interval E-value
PRK05428 PRK05428
HPr kinase/phosphorylase; Provisional
1-308 2.40e-161

HPr kinase/phosphorylase; Provisional


Pssm-ID: 235459 [Multi-domain]  Cd Length: 308  Bit Score: 451.55  E-value: 2.40e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933   1 MAVSVQDLLDKIHFHVIYStETALQKEITTSEIMRPGLEMAGYFDYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMA 80
Cdd:PRK05428   2 KSVTVKDLIEDLKLEVVAG-EEGLDREITTSDISRPGLELAGYFNYYHPERVQVLGKTEISYLNQLSEEERKERLKKLFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  81 KETPVVIVARNLEIPSEMVAAAKKADIVLLQSREATSRLNSVLTSFLDERLAERTTVHGVLMDIFGVGVLIQGASGIGKS 160
Cdd:PRK05428  81 LEPPCIIVTRGLEPPPELLEAAKEAGIPLLRTPLSTTRLISKLTNYLDRKLAPRTSVHGVLVDIYGIGVLITGESGIGKS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 161 ETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKA 240
Cdd:PRK05428 161 ETALELIKRGHRLVADDAVDIKRIGPDTLEGRCPELLQHLLEIRGLGIIDVRTLFGATAVRDKKRIQLVVELEEWDEDKE 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500159933 241 FDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMGFDATKTFEDRLTDLISHNKE 308
Cdd:PRK05428 241 YDRLGLDEETEEILGVKIPKITIPVRPGRNLAVIIEAAARNYRLKLMGYDAAEEFIERLRKLIEENES 308
hpr-ser TIGR00679
Hpr(Ser) kinase/phosphatase; Members of this family are the bifunctional enzyme, HPr kinase ...
3-303 7.51e-139

Hpr(Ser) kinase/phosphatase; Members of this family are the bifunctional enzyme, HPr kinase/phosphatase. All members of the seed alignment (n=57) have a gene tightly clustered with a gene for the phospocarrier protein HPr, its target. [Regulatory functions, Protein interactions, Signal transduction, PTS]


Pssm-ID: 273214  Cd Length: 300  Bit Score: 394.53  E-value: 7.51e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933    3 VSVQDLLDKIHFHVIYStETALQKEITTSEIMRPGLEMAGYFDYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMAKE 82
Cdd:TIGR00679   1 ITVSELFEKLNLELVAG-EDGLDREITEPDINRPGLELAGYFNYFHPKRVQVIGNTELSYLESLDEEERKERLEKLLKLK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933   83 TPVVIVARNLEIPSEMVAAAKKADIVLLQSREATSRLNSVLTSFLDERLAERTTVHGVLMDIFGVGVLIQGASGIGKSET 162
Cdd:TIGR00679  80 PPCLIVTRGLEPPEELLELAEEYNVPLLRTSLSTSELITTLTTYLEEQLAPRTTVHGVLVDVFGVGVLITGESGIGKSET 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  163 GLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKAFD 242
Cdd:TIGR00679 160 ALELIKRGHRLVADDAVEIKRISGNTLIGRAPELLRHFMEVRGLGIINIRRLFGISAVRDSKKIDLVIELEKWDDEKEYD 239
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 500159933  243 RLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMGFDATKTFEDRLTDLI 303
Cdd:TIGR00679 240 RLGLEEQYYEILGVKIPKITIPVRPGRNLAVLIEVAARNHRLKQMGYNAAEEFNERLRKAI 300
Hpr_kinase_C pfam07475
HPr Serine kinase C-terminal domain; This family represents the C terminal kinase domain of ...
129-299 3.62e-96

HPr Serine kinase C-terminal domain; This family represents the C terminal kinase domain of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria. This kinase in unusual in that it recognizes the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller.


Pssm-ID: 462176  Cd Length: 171  Bit Score: 281.29  E-value: 3.62e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  129 ERLAERTTVHGVLMDIFGVGVLIQGASGIGKSETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGI 208
Cdd:pfam07475   1 EKLAPRTSVHGVLVDVYGIGVLITGESGIGKSETALELIKRGHRLVADDAVEIKRIGEKTLVGRAPEILKHFLEVRGLGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  209 IDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMG 288
Cdd:pfam07475  81 INVRRLFGAGAVRDSKRISLVIELEEWDKDKNYDRLGLDEETQEILGVKVPKVTIPVRPGRNLAVIIEAAAMNFRLKLMG 160
                         170
                  ....*....|.
gi 500159933  289 FDATKTFEDRL 299
Cdd:pfam07475 161 YDAAEEFIERL 171
HprK COG1493
Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction ...
136-278 1.24e-65

Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms];


Pssm-ID: 441102 [Multi-domain]  Cd Length: 142  Bit Score: 202.34  E-value: 1.24e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 136 TVHGVLMDIFGVGVLIQGASGIGKSETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLF 215
Cdd:COG1493    1 TLHGVLVDVGGRGVLITGPSGSGKSELALELIKRGHRLVADDRVELRREGGGRLIGRAPELLRGLIEVRGLGILDVPTLF 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 500159933 216 GAGAVKDSTDIDMAIYLEYYDkEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAA 278
Cdd:COG1493   81 GAGAVRPEARIDLVVDLVEWD-DKEYERLPLEEETTEILGVEVPLLTLPVRPGRNLAVLIEVA 142
HprK_C cd01918
HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the ...
133-282 5.23e-62

HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria. It catalyzes both the ATP-dependent phosphorylation of Ser-46 of HPr and its dephosphorylation by phosphorolysis. The latter reaction uses inorganic phosphate as substrate and produces pyrophosphate. Phosphoenolpyruvate carboxykinase (PEPCK) and the C-terminal catalytic domain of HprK/P are structurally similar with conserved active site residues suggesting these two phosphotransferases have related functions. The HprK/P N-terminal domain is structurally similar to the N-terminal domains of the MurE and MurF amino acid ligases.


Pssm-ID: 238899  Cd Length: 149  Bit Score: 193.61  E-value: 5.23e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 133 ERTTVHGVLMDIFGVGVLIQGASGIGKSETGLELVKRGHRLVADDRVDVFQRDAfTLSGEPAEILRNMIEIRGVGIIDVM 212
Cdd:cd01918    1 PTVTVHGVLVEVGGIGVLITGPSGIGKSELALELIKRGHRLVADDRVVVKREGG-RLVGRAPEALKGLIEIRGLGIIDVP 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 213 SLFGAGAVKDSTDIDMAIYLEYYDKEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNF 282
Cdd:cd01918   80 RLYGIEAVRDRKVIDLVIELEEWEEEKNFDRLGLEEEYKRILGVKVPLLRLPVSPGRNLAVLIEVAAANF 149
 
Name Accession Description Interval E-value
PRK05428 PRK05428
HPr kinase/phosphorylase; Provisional
1-308 2.40e-161

HPr kinase/phosphorylase; Provisional


Pssm-ID: 235459 [Multi-domain]  Cd Length: 308  Bit Score: 451.55  E-value: 2.40e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933   1 MAVSVQDLLDKIHFHVIYStETALQKEITTSEIMRPGLEMAGYFDYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMA 80
Cdd:PRK05428   2 KSVTVKDLIEDLKLEVVAG-EEGLDREITTSDISRPGLELAGYFNYYHPERVQVLGKTEISYLNQLSEEERKERLKKLFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  81 KETPVVIVARNLEIPSEMVAAAKKADIVLLQSREATSRLNSVLTSFLDERLAERTTVHGVLMDIFGVGVLIQGASGIGKS 160
Cdd:PRK05428  81 LEPPCIIVTRGLEPPPELLEAAKEAGIPLLRTPLSTTRLISKLTNYLDRKLAPRTSVHGVLVDIYGIGVLITGESGIGKS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 161 ETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKA 240
Cdd:PRK05428 161 ETALELIKRGHRLVADDAVDIKRIGPDTLEGRCPELLQHLLEIRGLGIIDVRTLFGATAVRDKKRIQLVVELEEWDEDKE 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500159933 241 FDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMGFDATKTFEDRLTDLISHNKE 308
Cdd:PRK05428 241 YDRLGLDEETEEILGVKIPKITIPVRPGRNLAVIIEAAARNYRLKLMGYDAAEEFIERLRKLIEENES 308
hpr-ser TIGR00679
Hpr(Ser) kinase/phosphatase; Members of this family are the bifunctional enzyme, HPr kinase ...
3-303 7.51e-139

Hpr(Ser) kinase/phosphatase; Members of this family are the bifunctional enzyme, HPr kinase/phosphatase. All members of the seed alignment (n=57) have a gene tightly clustered with a gene for the phospocarrier protein HPr, its target. [Regulatory functions, Protein interactions, Signal transduction, PTS]


Pssm-ID: 273214  Cd Length: 300  Bit Score: 394.53  E-value: 7.51e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933    3 VSVQDLLDKIHFHVIYStETALQKEITTSEIMRPGLEMAGYFDYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMAKE 82
Cdd:TIGR00679   1 ITVSELFEKLNLELVAG-EDGLDREITEPDINRPGLELAGYFNYFHPKRVQVIGNTELSYLESLDEEERKERLEKLLKLK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933   83 TPVVIVARNLEIPSEMVAAAKKADIVLLQSREATSRLNSVLTSFLDERLAERTTVHGVLMDIFGVGVLIQGASGIGKSET 162
Cdd:TIGR00679  80 PPCLIVTRGLEPPEELLELAEEYNVPLLRTSLSTSELITTLTTYLEEQLAPRTTVHGVLVDVFGVGVLITGESGIGKSET 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  163 GLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKAFD 242
Cdd:TIGR00679 160 ALELIKRGHRLVADDAVEIKRISGNTLIGRAPELLRHFMEVRGLGIINIRRLFGISAVRDSKKIDLVIELEKWDDEKEYD 239
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 500159933  243 RLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMGFDATKTFEDRLTDLI 303
Cdd:TIGR00679 240 RLGLEEQYYEILGVKIPKITIPVRPGRNLAVLIEVAARNHRLKQMGYNAAEEFNERLRKAI 300
Hpr_kinase_C pfam07475
HPr Serine kinase C-terminal domain; This family represents the C terminal kinase domain of ...
129-299 3.62e-96

HPr Serine kinase C-terminal domain; This family represents the C terminal kinase domain of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria. This kinase in unusual in that it recognizes the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller.


Pssm-ID: 462176  Cd Length: 171  Bit Score: 281.29  E-value: 3.62e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  129 ERLAERTTVHGVLMDIFGVGVLIQGASGIGKSETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGI 208
Cdd:pfam07475   1 EKLAPRTSVHGVLVDVYGIGVLITGESGIGKSETALELIKRGHRLVADDAVEIKRIGEKTLVGRAPEILKHFLEVRGLGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933  209 IDVMSLFGAGAVKDSTDIDMAIYLEYYDKEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNFRAKQMG 288
Cdd:pfam07475  81 INVRRLFGAGAVRDSKRISLVIELEEWDKDKNYDRLGLDEETQEILGVKVPKVTIPVRPGRNLAVIIEAAAMNFRLKLMG 160
                         170
                  ....*....|.
gi 500159933  289 FDATKTFEDRL 299
Cdd:pfam07475 161 YDAAEEFIERL 171
HprK COG1493
Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction ...
136-278 1.24e-65

Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms];


Pssm-ID: 441102 [Multi-domain]  Cd Length: 142  Bit Score: 202.34  E-value: 1.24e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 136 TVHGVLMDIFGVGVLIQGASGIGKSETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLF 215
Cdd:COG1493    1 TLHGVLVDVGGRGVLITGPSGSGKSELALELIKRGHRLVADDRVELRREGGGRLIGRAPELLRGLIEVRGLGILDVPTLF 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 500159933 216 GAGAVKDSTDIDMAIYLEYYDkEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAA 278
Cdd:COG1493   81 GAGAVRPEARIDLVVDLVEWD-DKEYERLPLEEETTEILGVEVPLLTLPVRPGRNLAVLIEVA 142
HprK_C cd01918
HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the ...
133-282 5.23e-62

HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria. It catalyzes both the ATP-dependent phosphorylation of Ser-46 of HPr and its dephosphorylation by phosphorolysis. The latter reaction uses inorganic phosphate as substrate and produces pyrophosphate. Phosphoenolpyruvate carboxykinase (PEPCK) and the C-terminal catalytic domain of HprK/P are structurally similar with conserved active site residues suggesting these two phosphotransferases have related functions. The HprK/P N-terminal domain is structurally similar to the N-terminal domains of the MurE and MurF amino acid ligases.


Pssm-ID: 238899  Cd Length: 149  Bit Score: 193.61  E-value: 5.23e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 133 ERTTVHGVLMDIFGVGVLIQGASGIGKSETGLELVKRGHRLVADDRVDVFQRDAfTLSGEPAEILRNMIEIRGVGIIDVM 212
Cdd:cd01918    1 PTVTVHGVLVEVGGIGVLITGPSGIGKSELALELIKRGHRLVADDRVVVKREGG-RLVGRAPEALKGLIEIRGLGIIDVP 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933 213 SLFGAGAVKDSTDIDMAIYLEYYDKEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVEAAVMNF 282
Cdd:cd01918   80 RLYGIEAVRDRKVIDLVIELEEWEEEKNFDRLGLEEEYKRILGVKVPLLRLPVSPGRNLAVLIEVAAANF 149
Hpr_kinase_N pfam02603
HPr Serine kinase N terminus; This family represents the N-terminal region of Hpr Serine ...
3-127 3.88e-50

HPr Serine kinase N terminus; This family represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phospho-relay system in control of carbon catabolic repression in bacteria. This kinase in unusual in that it recognizes the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains.


Pssm-ID: 460614  Cd Length: 125  Bit Score: 162.18  E-value: 3.88e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500159933    3 VSVQDLLDKIHFHVIYSTETALQKEITTSEIMRPGLEMAGYFDYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMAKE 82
Cdd:pfam02603   1 VTVKELIEKFKLELLTGEEGLDRIEITTPDINRPGLELAGFFDYFDPERIQILGNTEISYLESLSEEERKERLEKLFSYK 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 500159933   83 TPVVIVARNLEIPSEMVAAAKKADIVLLQSREATSRLNSVLTSFL 127
Cdd:pfam02603  81 IPCIIVTRGLEPPEELLEAAKKYGVPLLRTKLSTSEFISELIRYL 125
PEPCK_HprK cd00820
Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the ...
135-179 7.37e-09

Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis. It catalyzes the reversible decarboxylation and phosphorylation of oxaloacetate to yield phosphoenolpyruvate and carbon dioxide, using a nucleotide molecule (ATP or GTP) for the phosphoryl transfer, and has a strict requirement for divalent metal ions for activity. PEPCK's separate into two phylogenetic groups based on their nucleotide substrate specificity (the ATP-, and GTP-dependent groups).HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria. It catalyzes both the ATP-dependent phosphorylation of HPr and its dephosphorylation by phosphorolysis. PEPCK and the C-terminal catalytic domain of HprK/P are structurally similar with conserved active site residues suggesting that these two phosphotransferases have related functions.


Pssm-ID: 238418 [Multi-domain]  Cd Length: 107  Bit Score: 52.68  E-value: 7.37e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 500159933 135 TTVHGVLMDIFG-VGVLIQGASGIGKSETGLELVKRGHRLVADDRV 179
Cdd:cd00820    3 TSLHGVLVDVYGkVGVLITGDSGIGKTELALELIKRKHRLVGDDNV 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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