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Conserved domains on  [gi|500210644|ref|WP_011880837|]
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MULTISPECIES: DUF4019 domain-containing protein [Burkholderia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4019 super family cl16161
Protein of unknown function (DUF4019); This family of proteins is functionally uncharacterized. ...
 40-145 1.81e-23

Protein of unknown function (DUF4019); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 130 and 183 amino acids in length. There is a single completely conserved residue E that may be functionally important.


The actual alignment was detected with superfamily member pfam13211:

Pssm-ID: 433040  Cd Length: 104  Bit Score: 88.11  E-value: 1.81e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500210644   40 DADTVFKQLDAGQYGAVWADSAAFVKARIKQDQFAADMQRARQSVGTVRHRGWAQITriRYTNAGTTPDGLYANVDYATT 119
Cdd:pfam13211   1 AARAWLALVDAGDYEESWEQASALFKKAVTEEQWEKALRAVRAPLGAVVSRKLASAT--YTTTLPGAPDGEYVVIQFRTR 78

                          90       100
                  ....*....|....*....|....*.
gi 500210644  120 LTTGTTVYEKLSFRLEDDGLWHLTGY 145
Cdd:pfam13211  79 FANKKSATETVTLMREADGVWRVVGY 104
 
Name Accession Description Interval E-value
DUF4019 pfam13211
Protein of unknown function (DUF4019); This family of proteins is functionally uncharacterized. ...
 40-145 1.81e-23

Protein of unknown function (DUF4019); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 130 and 183 amino acids in length. There is a single completely conserved residue E that may be functionally important.


Pssm-ID: 433040  Cd Length: 104  Bit Score: 88.11  E-value: 1.81e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500210644   40 DADTVFKQLDAGQYGAVWADSAAFVKARIKQDQFAADMQRARQSVGTVRHRGWAQITriRYTNAGTTPDGLYANVDYATT 119
Cdd:pfam13211   1 AARAWLALVDAGDYEESWEQASALFKKAVTEEQWEKALRAVRAPLGAVVSRKLASAT--YTTTLPGAPDGEYVVIQFRTR 78

                          90       100
                  ....*....|....*....|....*.
gi 500210644  120 LTTGTTVYEKLSFRLEDDGLWHLTGY 145
Cdd:pfam13211  79 FANKKSATETVTLMREADGVWRVVGY 104
 
Name Accession Description Interval E-value
DUF4019 pfam13211
Protein of unknown function (DUF4019); This family of proteins is functionally uncharacterized. ...
 40-145 1.81e-23

Protein of unknown function (DUF4019); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 130 and 183 amino acids in length. There is a single completely conserved residue E that may be functionally important.


Pssm-ID: 433040  Cd Length: 104  Bit Score: 88.11  E-value: 1.81e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500210644   40 DADTVFKQLDAGQYGAVWADSAAFVKARIKQDQFAADMQRARQSVGTVRHRGWAQITriRYTNAGTTPDGLYANVDYATT 119
Cdd:pfam13211   1 AARAWLALVDAGDYEESWEQASALFKKAVTEEQWEKALRAVRAPLGAVVSRKLASAT--YTTTLPGAPDGEYVVIQFRTR 78

                          90       100
                  ....*....|....*....|....*.
gi 500210644  120 LTTGTTVYEKLSFRLEDDGLWHLTGY 145
Cdd:pfam13211  79 FANKKSATETVTLMREADGVWRVVGY 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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